Spo19199 (gene)

Overview
NameSpo19199
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_160 : 752363 .. 762030 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTTTCAACAAATATATTTGAATTTAGTTACACCTATAAATAAAATAAATATCAAATCAATCAATGTATTGTTAATTCTTAATTCTTAAGAAATCCAGAAACACAGAACAACCAAAACAAGAAACAGAGAGAAAGAAGAAGAAATCATCAAATTATGAGCTATCCTTCAGGTAAACCCCATTTAAGTTTTTCAATCGGGTTTTATTTGATTGGATTTTTTTTAATTCTTTGAATAAATTTCCCATTTTTTCTGGTTTTTTTATTGTTGAATTTTGACGATGTTGATGATTAGGGTATGGGACGCAATATGCGCCACCGTCAGCACCACCACCACCAGGGTACCCCGGGTACCCTCCACAACAAGGGTATGAAGGGTTCCACCACAACCCTCCAGGGCCTCCACCACCAGGGTACGGTCAACACCACCATCACCAACCTGGTGGTTACCAGGGCTACTTCAATGATGGGTACCCACCGCCTCCGCCTCCTCCTCAACCGTATCCTCCTACCCAGGTTTACCACTGTGAGCATTCACACAATCACCACAATGGCTGTTTATCCTTCTTGAAGGGATGGTATGTTTTAATCTTTTCTCTCTTTCTATATCTTCTTTTACGTTCGCAAATTAGATCTTACACCCGGGAGCATGATGTTTAATGCGTGTTAATTGTTAACTCTAGTTCTATACGTAGTGGATGTGCTATAAATGTGAACTCTGATGATTATGGTTCTAGAATTTTGTGATAATTTCAATTGCAAATCGGATAATCGGGATATGTTGTTGTTATCATAGGAGTTAAAGGGATTACACTGTGTTGTTATGTGGTCATAGTCTAACTTGTGACGGCGTAGTTTATGGTTTATTTTTTCTGTTTCCTTGATCATACTTCATACCATATATACTGTGGTCATGAGGACTCTAAAGTTGGTTTGCTTTTGATTTGTTGCAGAATATACATTTTTTTTTTGCTGTCTCTGACGAGTGGGTTATGTAGGTAAACTGTAAGTATGGCGCAATGACATGCTAGACCTATTCAATTTGTCCATGGTTAGAAAATCGAGAAATAGGTAGAATGGTCTAGCAATCCAAAGAATAGAGAAGTAAGTCACAAACAAAAGGTGACTAGGTGAGGCCGTGACTCGATGAGGTTAGGGGTAATTTGACATGAATATGAAGGACTAAGATCTGAACATATTGTAGAAACCTTTTACTTTAAATTAAGGAGCTACAACGTCCTGTTGAGTGTCCTCTTCTTGGTGAGTTCGTAGATAGGTAACAGTCTTGCTGGATCCCTCCTCCACCCCCCCNCCCCCCCCCCCCCCCCCCTCCCCCAATAAAAAAGACGTTCCACTTTGGTACACCTTTCCTCATCTCCCATGAATTTCCTTACTAACGCATTGTGGTGTACTGGTGTGTCTGCTTCGACGCTCAACCCACCATAGTGATCTCAGCCTCCAGCTCAGGTTTTCTCAACTCATTTTCTGTTGAGTCTAATTGTCTAAAGTGATCACTCTCACTTTGTTGACCTCTTTATTCATAATGTTGTTTTTCCTAGTATGGTTAATTGGTCATATGACTCATATCCAACAAAGTATCCTCATCTTCGCCACAATTGACTTGAGGTCTTATACTTGTGTTTCTTGTCATAAAGAATTCTAAAGTGCTCCTCCGTTTCATCTGGAAAACATATACGAAGTATAAAATATTTACGTCCTTGTACTTTTCTCTCCGGTACTTTGGACTTTTGTTAGAGATTTGAATATTCTTAGATTGGACAAATGATTTCAAGCTATAAGCAATTTCAATAACGTTAGAGACCATTTTTTCCCTTAGTTTCCTTATTGCTACATCTTCCATTACTTAAGTTTCATAATGTATGTATGCACGAGGTGCATTTTGTTATTAATTACGTTTTGTAGACAATTGAGCCGAGTCTTATTTTCACCCTTTCTTCCCTGTTTTTCTTACTCTAGAATGCGTCATAGTGGTTTTTTTTTTTGGTATGATAACCTAGGTTGCTGCAACTTTTCATTTACATCAAGTACCCATATCAAATACGCGATTCTCAACATTGGTGTGACACTAGACAGTAGACACTTTGTTTTTGGACTAGAATTGTTACAACTTTCATAGGTGGCAATGTCTAGAAGATACATATTTGGAATATTTAGGTATATGAAATGCATACAAGAATAGGGATTCTCATGGAATGCAGAGTGCTGGAGCAGTAAAGCTCATTATTTTAAAATGAAGTACTTATAAATCATTAATAAAAGGATAAAAGCCACGATTCTTTTTTAATCAACCCATATGACTAAGAGTAAAGCTCAAATAAGATATTAATAAACTATCATGTAATAATTGGCTAATATTCTTTTTTCTCTTAAGAAACTATTACTGTGGTTTCTAAAAGTATTAAAAAAATGAATGTCATGTACTCCCCAGGCGGGATACTTTACGCATTAGCTACAACAATGCACGGGTCGATACGCACAACGCCTGGTATCCATCGTTTATGACTAGGAGTAATGGGGTATCTAATCCCACAGTAATATGGAGTCAAATGTTAGAAAATTCATTTCTAATAGAGAATATTTATCTTTTGGATCAGAGTTAATTCACGTTTTTATTTGATGGATTCAACTCAGGGTCACTCAGGCGTAATGTATTAATAAACTATTGTGCCTTGTGGTTAATTTTCATTAGATCAACGTATTCTGTCTGGGGAACTTGATATGACTGAGTTGCAACTTGCATTTGATAAGTTCCTTACATAGTTCAGTAAGTGAATGATGGAGAAATGATTATGGAGGAAAAGAGGCTTCAGGTCCTACATCATTTTCTTCTCATCATTAATCCATAGCCACCTAATTTTGATGGAATCTTCCTCAGTCTAGAGGAAGGATTTCTTGCAAACGTCTAAACTATTTTATGAAGCTTGAGGTGAAAGAAAGGATCATAACGGATCACTCAACCTACAATCCTTTTCATGTTGTAAAAAGTACGTGGTAGAAAAAATTCTGGTCAAATTTTATCGAGTTATTTTTTGAAAATGTGTCAAAGTTTACGGTCTGCTTCATTATTACCGGAGCATAACTACTCCCGAAATTATGGTTAGTTTGAGACGGCATGGACATTTACACTGAAAATCAGTATGTCAAGACTGAAAGTACTTGTATGGCTGTATCATGGAGGAATAGAATTATTTCTACTCCCTCCGTATTTATTTAAGAGATACACTTGGTCGGGCACGGGTATTAAGAAAAAAAATTGAATGAAATAAAGTAATAAAACAAGTGGGGTTGGGTAGATATTTTAATAAGTAAAACAAGTGGGGACCATGTCATTTTAGGGGATGGGGGATGGGGATGGGGATGGGGTGTAGATAGATTATTTAATTAGATGGTGGGGTTGATAAGTTACTAAAAATGGCAAGTGTATCTCTTAAATAAATACGGCTGGAAAAGGCAAGTGTATCCCTTAAATAAATACAGAGGGAGTACATGTCAAAATGGAAGACGGTCAATATTGTAGAAGGGAATGACGAATATCCTAACCAACACAAAACCCGTCCAATTAATCCCCATAAACACCACCTTTTGAGGCCTCTTGAAACATGGTTTATTTGGTGATGATATAGGACTGGCTCAATGAGATTATTATAAAGGTAGGGAATTAGGGATATAAGTTGTATGATCATGATAGTATTCCAAAGTTCTGGTTGGTCTCTTAGCTCTACTTTTCATTTAGCCTAGTTTAACCCACCCCCTACACCATTACCCTACTGTTTATTTGTAGACCCTTCTCTGATCCGCCCATCAATTATTAAAAAGGGCTTTATGAGTCTCTACACATATAGTCGAAACCCACATTTTATAAGATGTAAATAACCAACAATGATTCTTTTAACGGATCACTTTAATTTGGGCCATATTATCTGACAGTGTATAAATACAAGTATACAAGTATACCCGAATACTAATAATTATATTCACAAATAAATGATTTTTAGGTCCATATTTCCAACATTAGCTTACCCATATCATGTATGATGTTGGAAGAAAAACATCATTTACAGTTTGAATAATAAAGGGGAAGGGTAAGACGCAGCAACATATGTTCAAACTTGCTTAATCTGTCAACCACTACCAACATTTCCTGACTGCATCTGGGATTGGTAAGGGGCTCAAGGAACTTGCTGAAAAGCTGATGAGTTTACTCCTTCGTCCTATCTTACTTCCCTTTTTATGACTCCTTTAACCTTGTATAGGAATGCTAATCCGCCGAGAGTCCTCCTGAAAGATGTTACGGTACAAAACTTAAGCTTTGGCTAAGCATAGTTTTTTTTGGCAATGAATATAGAGATTTATTTATAGAACCAAAAAAGGGAGTTACAAATTACATCCCTAGTCGACAAAATAACTGTTGATGGAGTTTGTCGCTTAACCGTGGATTACAACAAGTACAGCATGCACATTTACGGTTCCCCACAGGGTCCTGTTTCTCGGGACGTGGTGCCCTCCTCCTTTAGGCTTGGTGAAGATCAACTGCGAAGATGCCATGGCTGGAGATGGTTGGGTGGGGATGGGGGTTGTAGCCAGTGATGAAAAGGGATATGCGGTATTTGCAGCCATGCGGAGGGATGACAATTTCGTTGCTCTTACTTTGATTCGATTAGTTGGGCTCATGTTAGAACTTAGAAGGGATGACAATCTCGTTGCTCATCATCCTTGGTAGATTTTGAAGAAGTGGGTTGACCATAGCTTAGTTTTAAAAGGCGCGAAGCGCACTGAAGCGGTAAAGGGCCCTGGAGCTTAAGCGCAAAGCGAAAGCGCACGCTTTTCGTAGGCGAAGCGCACCCATAAAGAAATAATAAAATTTCAAAAGTTCAGAAAATATGGAGAAAATATGGAAAGAAAAGATGAAAAAAAAGAGAAATCAAAACGATGAAAGATAAATTCAGAATTCGACGGGAGAAATCCGGCGAGAAGGCTAGAGAAATCCGGATACGGGAGAAAATTGCACTAGGGTTTTCAAAAACTTCCCAAATATTCGTTTTTTTAAAAAAAGAAAACACATGATACTTACAAAAAGAAGATTAGCGTCACGTGGCTTTATTTTTTATAAAAAAGAAGGGTCTGATGTGCCCAGAAGCACCGAAGCGCTAGGAAGCGCGCGCTTCTTGTATGTCGCTAGGCTTCGGCTGACAGAAGCGTTTTTTTGTGAGCTTCTGAGCTTCCGAGCTTTAAGCGCAAAAAAGCGCGCTTTTTAAAACTAAGGACCATAGTCCTTGTGAGGTGGCTTTATATGTACTTGTGTAAATAGTATCTCTTGATTAATAATAAGCAGTTAAACACTAATCTTTGGCCTCAAAATAAAAGTTTTCAACCTGAGCAACAAAGCTAGAACCTGTTAGCATCAGTTACTCGAATCACACACATTCTATGAAAGGTCTTGAAAGAGACTCTTGATTTGCAAATACTAGGTAGAACAACTAATACATTATCATATTGTTTCTCACCACATCTACACCTGATAGAAACTCTAAAACAACTTATTTAACTTCCACTTCATGGCTATAAACTAAACCTTCAAACACCTTATTTCTTCGCCCCCAAATTGCTTAAATTGTTCTGAAAAACACAGCATAGATGCTTCTTTGATTTCATCTTCAAGTTTCAGGACAAGTCTCTGAATTTGCAGAACACCCGTCAGTGCTCTCCAAATAGAAGCATAATAGGAAAATTCAAAGAACAAAAGCTCAATGTTTTTAAAAGCCATGTTACACAGAACATAATTCACATCAGTATGATTGTTCCAAATTTCTAACCTGTCCTTAGTTGTCAATCTATGAAAGATAGGAAGCCAAGTGATGAATAGACTTTTTAAGGCTTCCTTTGTTGTTGTAGATCACCCTTTTCCGATGAACATCAACAGCAGGGCCTTGAATTTGTTTTAAAATTTGTCACCATGAGTACAGGGTTGCAGACCAACATTCTCTAAAATATACCTTCTTCTCTCCATAACCTTCTTAAGCACCCATAAAATTCCTCTTTGGTAAGGCATGTGCCAAACATTTTTGCCTTTTATGTAATTGGCATAGAGCCACCTGATCCATATTTGTCCTGCTTAGAATTTATTTCCCATAATTTGTCCTGTTACGGCGGTTTGTTCTAGCTAGGAAGATCAGGAGGTTCCAACCTCCATCTGCCTTAAGGAGAGGCATCTTCTCCCATGCTACTAGGGCGTTCTTAGATTTCTCCGCTGAACCAGTCCATACAAACACTCTACGTATTATTTGCACCTCCTTTAAAACCTTCTTAGGAAGAAGGAAATTTTGGCTCCAGTAATTTTGCATAGTAATACGAATTGTTTAACCAACTGAATCCTACCAGCTTAAGAAAGAAGTTTAGCAGACCAAGATCAACCCTTGCAACCATTTTTTCAATAAGAGGTTTAACCAACTGGTTGAAAGGAAGCTTCTTAGAAGCTAAAGGAACTTCAAGGTATTTAATAGGGAGCTCTCCTTCTTCCATTTTAAGCGCCCACTTGATAGCTTTAGAAACAAAAGTAGGAACTCCTCTCACATATATATATATATACACAACTTTTATCTAAGTTAGCTTCAAGGCTGAAACTTGAGAAAAGCAGAATACAGAAGGCTAATGGATACCGCATCAGCATAGTGAATTTTGATACCCCTATGATACTCTTCCTTAGTTCCATGTCTTCACTCCCAGTACCAAAGGGTACTTCAGGTGGAAAGTTGCACTTGTGCAGATACTCATCCTTTGCTTATTTAGATTTTACCTGTTCTGTGAGTCCAATTGTATCTGTGTAGCCATCAATAAAGTTAGACTTGAGCTCTGCACTATAAAATTATAAATCCTTGGGAAAGAAGCAGCAGCCACATTTTGGATTCCTTTCCCGTAAGGCCTCCTCAGCTCCACTGCAATTACTAGGGCTAACAAATATTTTCTTTAGAAGGCAAGGCTTGATACTTGAGGTGTAGAGTTTTGCAACTAGTAGTTCGGGGATGGCCCCTTTTAACTAAAAAATGTACGTGTTCCAAGATTGAAGAGTTTCTTACAATAACGAAAGGAATAGCAAAATCTGGCAAATGTTGGAGCAGTTGGCAGACTTAAGTCCTCAAACGCCATTTAAGATTATGTAATCCAGAAAAATGCATTATTCTTTAATAAGTAATTAAAAGATTCTCTTAACAGACTCGTACCCTAACACAAATTTCTTTCAGTAACCTATGAACTTAAACCCCCTTAAACTCATCCTACTTTTTGGTATCCACCAGTTCTGCAAACATAATGTGTCTCAGCTCTCAGGTATTTTCCCTCATAACCCCTAAAGATATGTATATATATATATATACACTCTAAATTATGCAAAAAGAATGTAATCTCCAAATTTTTAATGGTCATTTAGAGGTGTTGTAGTCTTTGTTGGTGGTGTTCAAGGGTTAGGCTGTAAAATGTGATCGTCATCAGATAGTAACAGCATAAACTTTCACAAATAAGGCTTGGGAATGGAAGTTTTTGGATTTGGGGGGAGCATTAGTTAGACCAAAAGGTACATCCAAAAATTTATGTTCCCCTTATGGGTCTAAAGGCTGATTTTGGTATGTTAGAAGGATTGATTTTAACCTATGAGTATCCACCCTTTGGTTAAGCTTAGGAAAAATGGACTGGAAAAGCGTAAATGGTGGCTGGTGGAGTGGTGGGTATATAGGAGAAACTGTTGTATATTTTTTGTTTAATTTCTGTAGAATCAACACAAAACCTCCACAAAAATAGATATAAATAGTTGTCGAGAGAGATGAAGTAGTGATGAATTGATTGTAAGGAAGAATGAGGTAGTGATGGTGTGATGAGAAGGGGAGGGAGGGGAATAATATTACCCTCATTTTTGGGGGTAATAGTTGTACCCAGGTAGGATTGCGTAACTATTACCCTCGTAATGAGGGTAATTCCCTACTCATCTTTGTTTTTCATACCCACCACTAGCTTATTTTCTTTATCACCACTTCATCCTCTTGAATAGGGCTGTCAAAAACTGACCCGATCCATCCTGACAAAAACCGAAGTGACCCAGAAAAAAAAATTCACACAGTCAATCCGCATGAGCACAATGACCCCACACAAAACATTATCTGATTATAGCCGAACCGTTTAAACCCGAACCGTAAGCGATCGATGACCCGATTTGACAGCCCTACTTTTGAACATCATCTTCATCCACATTCACTTTTCTAGGTTTGACTTTTACCACTCCCTTAATACCCTGATGTTGGGGACCGAGAAAAGTGGAAAAATAGGGGCCAAGAAACCTTTTATCACTCCTGATTTTAGGCAGTTGAAGGATGATAATGGGGAGCTGAGAAGGATAATATTCTGGAGATATGTGGAACCTTCGGCAAATTAGCAAATGTCTTAACCATATCCACTGTTGCTTCAGTGGAATCGTTATAAGTATGGAGTAACTGAGAACTAGACAGACAAGGCAGGCTTCCTTTGACTTATTGCATGTTTTCTGCCTTGTAAATATATGTAGAAGTAAATTCCATTCTCAAACTTTCAGACACCTGTAACGCTGATCGTAGAGTAACCACTGTATACCTGACACGATACACACACCCCTAATGGAAATTGTTACTTTTGCGCAAATAACCCCTATGCGGCTATGCCACTGGAAATTTGAGGCTTTCGTCATCAGTAGGTCTGAGGAAACAACCCACTTGCTGGCAGTAATTGTTTTCAAGCCCTGGATATTATGGATACTTTGATTAGGATTTGAAGGTTGAATTTTTGAACTCTGCTTTGTAGCCCTTGTGGTTTGATAGGAATTCACCCTGTCAGATATTCATCCCGTCTGCAAGATCTTTAGCCCTTCGTTCCAGGACATTCCTCCTCCCCCAAATAGCTTCCACAGGATTAGTGGCAATCTCACACTGATCATCATTCACTTGTATAGTTCCCAACCTCTATATCCGGTTCTAGGTCTATTCTATGTGATGTACTTTCCACCACAAACTCTGATTTTAATATTTATCAATTTTCTCAGACGTGTTTCTGGTTTGCAACTTGCAGATGTTGAAGCTTGAATTAAAGAATTACTTTAGGGAGGATTTTTTGTGATTCAAGTCTAGTTATAGCACTCTTATTTGATTTGTGATGTTTGCAATTTTTTTTTCTTTTTCACAGTTGTGCTGCCCTCTGTTGCTGCTGTCTGTTGGAAGAATGCTGCTTCTAGTTACTTTGCTCACCTGGGAATCTTGCTAATCTGTATCAAAAGGATGTCCCTCTCTTTAAGTCATACCCTATTATGGTCATGTTCACCTGTGAATTTGGAAGCATTTGGTCTCTGGTGGTGCTCACAGTGCCGTCTTTTTTTATTGTGAACAGAGCAATTTTAGTACAGAAATCAGTATGTATAATATTTTCAAAACTGATGCATAAAGTTTGTAAGTAATCTAAGATCTATGTGAATTTTCTAAACTGATGCCTGTGATTTACCTTTTATAATGTCTGATCATTTATGGTTATATATTGTACCCTTCAGCACCAGATCGTGTTAATTGCACATTAGCAATGGAGCTGAAAACATAAACTTCACACAATTAAAGAAACTCCCATAAATATACTCATGTCAAT

mRNA sequence

AGCCTTTCAACAAATATATTTGAATTTAGTTACACCTATAAATAAAATAAATATCAAATCAATCAATGTATTGTTAATTCTTAATTCTTAAGAAATCCAGAAACACAGAACAACCAAAACAAGAAACAGAGAGAAAGAAGAAGAAATCATCAAATTATGAGCTATCCTTCAGGGTATGGGACGCAATATGCGCCACCGTCAGCACCACCACCACCAGGGTACCCCGGGTACCCTCCACAACAAGGGTATGAAGGGTTCCACCACAACCCTCCAGGGCCTCCACCACCAGGGTACGGTCAACACCACCATCACCAACCTGGTGGTTACCAGGGCTACTTCAATGATGGGTACCCACCGCCTCCGCCTCCTCCTCAACCGTATCCTCCTACCCAGGTTTACCACTGTGAGCATTCACACAATCACCACAATGGCTGTTTATCCTTCTTGAAGGGATGTTGTGCTGCCCTCTGTTGCTGCTGTCTGTTGGAAGAATGCTGCTTCTAGTTACTTTGCTCACCTGGGAATCTTGCTAATCTGTATCAAAAGGATGTCCCTCTCTTTAAGTCATACCCTATTATGGTCATGTTCACCTGTGAATTTGGAAGCATTTGGTCTCTGGTGGTGCTCACAGTGCCGTCTTTTTTTATTGTGAACAGAGCAATTTTAGTACAGAAATCAGTATGTATAATATTTTCAAAACTGATGCATAAAGTTTGTAAGTAATCTAAGATCTATGTGAATTTTCTAAACTGATGCCTGTGATTTACCTTTTATAATGTCTGATCATTTATGGTTATATATTGTACCCTTCAGCACCAGATCGTGTTAATTGCACATTAGCAATGGAGCTGAAAACATAAACTTCACACAATTAAAGAAACTCCCATAAATATACTCATGTCAAT

Coding sequence (CDS)

ATGAGCTATCCTTCAGGGTATGGGACGCAATATGCGCCACCGTCAGCACCACCACCACCAGGGTACCCCGGGTACCCTCCACAACAAGGGTATGAAGGGTTCCACCACAACCCTCCAGGGCCTCCACCACCAGGGTACGGTCAACACCACCATCACCAACCTGGTGGTTACCAGGGCTACTTCAATGATGGGTACCCACCGCCTCCGCCTCCTCCTCAACCGTATCCTCCTACCCAGGTTTACCACTGTGAGCATTCACACAATCACCACAATGGCTGTTTATCCTTCTTGAAGGGATGTTGTGCTGCCCTCTGTTGCTGCTGTCTGTTGGAAGAATGCTGCTTCTAG

Protein sequence

MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGYFNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEECCF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19199.1Spo19199.1mRNA


Homology
[Close]
BLAST of Spo19199.1 vs. NCBI nr
Match: gi|902039592|gb|KNA02761.1| (hypothetical protein SOVF_215610, partial [Spinacia oleracea])

HSP 1 Score: 218.8 bits (556), Expect = 5.000e-54
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGY 60
           MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQ+HHHQPGGYQGY
Sbjct: 1   MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQYHHHQPGGYQGY 60

Query: 61  FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG 100
           FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG
Sbjct: 61  FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG 99
[Close]
BLAST of Spo19199.1 vs. NCBI nr
Match: gi|731343633|ref|XP_010682987.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 178.3 bits (451), Expect = 7.500e-42
Identity = 86/118 (72.88%), Postives = 94/118 (79.66%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPPPGYP------GYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGY 63
           P GYGTQY PP+APPPPGYP      GYPP  GYEG+ H+PP P   GY  +H H+PGGY
Sbjct: 12  PPGYGTQYPPPTAPPPPGYPPPPGYEGYPPPPGYEGYPHHPPPPGYGGYPHNHQHRPGGY 71

Query: 64  QGYFNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEECCF 116
           QGYFNDGYPPPPPPPQPYPPTQVYHCEH + H +GC SF KGC AALCCCC+LEECCF
Sbjct: 72  QGYFNDGYPPPPPPPQPYPPTQVYHCEHYNQHEDGCFSFFKGCLAALCCCCVLEECCF 129
[Close]
BLAST of Spo19199.1 vs. NCBI nr
Match: gi|661879655|emb|CDP16728.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 118.2 bits (295), Expect = 9.200e-24
Identity = 71/122 (58.20%), Postives = 78/122 (63.93%), Query Frame = 1 

		  

Query: 1   MSYPSGYGTQYAPP----SAPPPPGYPGYPPQQGYEGFHH-NPPGPPPPGYGQHHHHQPG 60
           MSY     + Y PP    +APPPPGYP  PP   YEG+    PP PPPPGY      +P 
Sbjct: 1   MSYQKA--SPYPPPGTAYAAPPPPGYPSAPPPPSYEGYPPPGPPPPPPPGYPYPPPPRPE 60

Query: 61  GYQGYFNDGYPPPPPPPQPYPPTQVYHCEHSHNHHN---GCLSFLKGCCAALCCCCLLEE 115
           GYQ YFN GYPPPPPPP P  P  VYH +H HN H+   GC S L+GC AALCCCCLLEE
Sbjct: 61  GYQQYFNHGYPPPPPPPPPPQPYGVYHSQHHHNDHDDHSGCFSCLRGCLAALCCCCLLEE 120
[Close]
BLAST of Spo19199.1 vs. NCBI nr
Match: gi|604321277|gb|EYU31865.1| (hypothetical protein MIMGU_mgv1a016178mg [Erythranthe guttata])

HSP 1 Score: 117.1 bits (292), Expect = 2.100e-23
Identity = 70/115 (60.87%), Postives = 76/115 (66.09%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGYFND 63
           P GYGT Y  PSAPP P + GYP    Y G+   PP PPPPG         GGYQGYFN 
Sbjct: 37  PPGYGTGY--PSAPPQPPHEGYP----YPGYPP-PPYPPPPG---------GGYQGYFNH 96

Query: 64  GYPPPPPPPQPYPPTQVYHCEHSHNHH---NGCLSFLKGCCAALCCCCLLEECCF 116
           GY PPPPPP   PPTQVYHC+H H H    +GC SF +GC AALCCCC+LEECCF
Sbjct: 97  GYAPPPPPP---PPTQVYHCDHDHYHDHGGSGCSSFFRGCLAALCCCCVLEECCF 132
[Close]
BLAST of Spo19199.1 vs. NCBI nr
Match: gi|848887656|ref|XP_012844053.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Erythranthe guttata])

HSP 1 Score: 117.1 bits (292), Expect = 2.100e-23
Identity = 70/115 (60.87%), Postives = 76/115 (66.09%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGYFND 63
           P GYGT Y  PSAPP P + GYP    Y G+   PP PPPPG         GGYQGYFN 
Sbjct: 9   PPGYGTGY--PSAPPQPPHEGYP----YPGYPP-PPYPPPPG---------GGYQGYFNH 68

Query: 64  GYPPPPPPPQPYPPTQVYHCEHSHNHH---NGCLSFLKGCCAALCCCCLLEECCF 116
           GY PPPPPP   PPTQVYHC+H H H    +GC SF +GC AALCCCC+LEECCF
Sbjct: 69  GYAPPPPPP---PPTQVYHCDHDHYHDHGGSGCSSFFRGCLAALCCCCVLEECCF 104
[Close]
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8B5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215610 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.500e-54
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGY 60
           MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQ+HHHQPGGYQGY
Sbjct: 1   MSYPSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQYHHHQPGGYQGY 60

Query: 61  FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG 100
           FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG
Sbjct: 61  FNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKG 99
[Close]
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EUL2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g152110 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.200e-42
Identity = 86/118 (72.88%), Postives = 94/118 (79.66%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPPPGYP------GYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGY 63
           P GYGTQY PP+APPPPGYP      GYPP  GYEG+ H+PP P   GY  +H H+PGGY
Sbjct: 12  PPGYGTQYPPPTAPPPPGYPPPPGYEGYPPPPGYEGYPHHPPPPGYGGYPHNHQHRPGGY 71

Query: 64  QGYFNDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEECCF 116
           QGYFNDGYPPPPPPPQPYPPTQVYHCEH + H +GC SF KGC AALCCCC+LEECCF
Sbjct: 72  QGYFNDGYPPPPPPPQPYPPTQVYHCEHYNQHEDGCFSFFKGCLAALCCCCVLEECCF 129
[Close]
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Match: A0A068VAQ8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019204001 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.400e-24
Identity = 71/122 (58.20%), Postives = 78/122 (63.93%), Query Frame = 1 

		  

Query: 1   MSYPSGYGTQYAPP----SAPPPPGYPGYPPQQGYEGFHH-NPPGPPPPGYGQHHHHQPG 60
           MSY     + Y PP    +APPPPGYP  PP   YEG+    PP PPPPGY      +P 
Sbjct: 1   MSYQKA--SPYPPPGTAYAAPPPPGYPSAPPPPSYEGYPPPGPPPPPPPGYPYPPPPRPE 60

Query: 61  GYQGYFNDGYPPPPPPPQPYPPTQVYHCEHSHNHHN---GCLSFLKGCCAALCCCCLLEE 115
           GYQ YFN GYPPPPPPP P  P  VYH +H HN H+   GC S L+GC AALCCCCLLEE
Sbjct: 61  GYQQYFNHGYPPPPPPPPPPQPYGVYHSQHHHNDHDDHSGCFSCLRGCLAALCCCCLLEE 120
[Close]
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Match: A0A022QZ92_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016178mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.400e-23
Identity = 70/115 (60.87%), Postives = 76/115 (66.09%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGYFND 63
           P GYGT Y  PSAPP P + GYP    Y G+   PP PPPPG         GGYQGYFN 
Sbjct: 37  PPGYGTGY--PSAPPQPPHEGYP----YPGYPP-PPYPPPPG---------GGYQGYFNH 96

Query: 64  GYPPPPPPPQPYPPTQVYHCEHSHNHH---NGCLSFLKGCCAALCCCCLLEECCF 116
           GY PPPPPP   PPTQVYHC+H H H    +GC SF +GC AALCCCC+LEECCF
Sbjct: 97  GYAPPPPPP---PPTQVYHCDHDHYHDHGGSGCSSFFRGCLAALCCCCVLEECCF 132
[Close]
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Match: A9P8I3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.000e-21
Identity = 67/114 (58.77%), Postives = 73/114 (64.04%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPPSAPPP-PGYPGYPPQQGYEGFHHNPPGPPPPGY-GQHHHHQPGGYQGYF 63
           PSGY   Y PP  PP  P Y GYPP     G  + PPG PPPGY G      P GYQGYF
Sbjct: 13  PSGYSPPYPPPGYPPTTPPYGGYPPTTPPYG-GYPPPGAPPPGYSGYPPPGPPRGYQGYF 72

Query: 64  NDGYPPPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEECCF 116
            +GYPPPPPPP P    + YH EH H   +GC SFL+GC AALCCCC+LEECCF
Sbjct: 73  AEGYPPPPPPPGPQQYQECYHYEHHHYQDDGCSSFLRGCLAALCCCCVLEECCF 125
[Close]
BLAST of Spo19199.1 vs. ExPASy Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.700e-7
Identity = 48/103 (46.60%), Postives = 53/103 (51.46%), Query Frame = 1 

		  

Query: 13  PPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGY--QGYFNDGYPPPPP 72
           PP   PPP   GYPP+ GY    + P G PP GY Q  +  P GY  QGY   GYPPP  
Sbjct: 7   PPVGVPPP--QGYPPE-GYPKDAYPPQGYPPQGYPQQGY-PPQGYPQQGYPQQGYPPPYA 66

Query: 73  PPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEEC 114
           P  P PP         H        FL+GC AALCCCCLL+ C
Sbjct: 67  PQYPPPP--------QHQQQQSSPGFLEGCLAALCCCCLLDAC 97
[Close]
BLAST of Spo19199.1 vs. TAIR (Arabidopsis)
Match: AT1G12810.2 (proline-rich family protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.200e-16
Identity = 68/166 (40.96%), Postives = 76/166 (45.78%), Query Frame = 1 

		  

Query: 4   PSGYGTQYAPP---SAPPPPGYP-------GYPPQQGYEGFHHNPPGPPPPGYGQHHHHQ 63
           P GY + Y PP   SAPPPPGYP       GYPP Q Y G+       PPP    +    
Sbjct: 13  PPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGY-------PPPSSRPYE--- 72

Query: 64  PGGYQGYF-NDGYP------PPPPPPQPYPPTQVYHCEHSHNHH----NGCLSFLKGC-- 116
            GGYQGYF   GYP      PPPPPPQ Y      HC H H+H+    +GC SF++GC  
Sbjct: 73  -GGYQGYFAGGGYPHQHHGPPPPPPPQNYD-----HCHHDHHHYQDSDSGCFSFIRGCHN 132
[Close]
BLAST of Spo19199.1 vs. TAIR (Arabidopsis)
Match: AT2G41420.1 (proline-rich family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.500e-8
Identity = 48/103 (46.60%), Postives = 53/103 (51.46%), Query Frame = 1 

		  

Query: 13  PPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGY--QGYFNDGYPPPPP 72
           PP   PPP   GYPP+ GY    + P G PP GY Q  +  P GY  QGY   GYPPP  
Sbjct: 7   PPVGVPPP--QGYPPE-GYPKDAYPPQGYPPQGYPQQGY-PPQGYPQQGYPQQGYPPPYA 66

Query: 73  PPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEEC 114
           P  P PP         H        FL+GC AALCCCCLL+ C
Sbjct: 67  PQYPPPP--------QHQQQQSSPGFLEGCLAALCCCCLLDAC 97
[Close]
BLAST of Spo19199.1 vs. TAIR (Arabidopsis)
Match: AT5G67600.1 (unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.400e-6
Identity = 41/107 (38.32%), Postives = 46/107 (42.99%), Query Frame = 1 

		  

Query: 7   YGTQYAPPSAPPPPGYPGYPPQQGYEGFHHNPPGPPPPGYGQHHHHQPGGYQGYFNDGYP 66
           Y  +  P  APPP GYP   P+ GY    + P G PPPGY Q          GY   GYP
Sbjct: 2   YHQEQHPVGAPPPQGYP---PKDGYPPAGYPPAGYPPPGYAQ----------GYPAQGYP 61

Query: 67  PPPPPPQPYPPTQVYHCEHSHNHHNGCLSFLKGCCAALCCCCLLEEC 114
           PP     P                      L+GC AALCCCCLL+ C
Sbjct: 62  PPQYSQAPQQKQNA--------------GMLEGCLAALCCCCLLDAC 81
The following BLAST results are available for this feature:
BLAST of Spo19199.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902039592|gb|KNA02761.1|5.0e-5498.9hypothetical protein SOVF_2156... [more]
gi|731343633|ref|XP_010682987.1|7.5e-4272.8PREDICTED: cysteine-rich and t... [more]
gi|661879655|emb|CDP16728.1|9.2e-2458.2unnamed protein product [Coffe... [more]
gi|604321277|gb|EYU31865.1|2.1e-2360.8hypothetical protein MIMGU_mgv... [more]
gi|848887656|ref|XP_012844053.1|2.1e-2360.8PREDICTED: cysteine-rich and t... [more]
back to top
BLAST of Spo19199.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q8B5_SPIOL3.5e-5498.9Uncharacterized protein (Fragm... [more]
A0A0J8EUL2_BETVU5.2e-4272.8Uncharacterized protein OS=Bet... [more]
A0A068VAQ8_COFCA6.4e-2458.2Uncharacterized protein OS=Cof... [more]
A0A022QZ92_ERYGU1.4e-2360.8Uncharacterized protein OS=Ery... [more]
A9P8I3_POPTR1.0e-2158.7Putative uncharacterized prote... [more]
back to top
BLAST of Spo19199.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CYT1A_ARATH2.7e-746.6Cysteine-rich and transmembran... [more]
back to top
BLAST of Spo19199.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G12810.21.2e-1640.9proline-rich family protein[more]
AT2G41420.11.5e-846.6proline-rich family protein[more]
AT5G67600.15.4e-638.3unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31568FAMILY NOT NAMEDcoord: 1..115
score: 9.4

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo253400.71Barchart | Table
Spo200470.68Barchart | Table