Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCAAGAAGAAATCAGGAAGGGTCCATGGACAGAACAAGAAGACCTTCAACTGGTCTGCTTTGTGGGATTATTTGGGGACCGACGATGGGATTTCATAGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGAAAAATGATAGGTATGCTTGTTTGAAGAATGGGGAGCTTTTACAAGAAGCATCCATTTTAACCACAGTTTTCTTGTAGGTTTAAAAAGAACAGGTAAGAGCTGCCGCTTACGATGGGTTAATTACCTGCATCCGGGGCTCAAAAGAGGAAAGATGACTCCTCATGAGGAGAAACTCGTCCTGGAGCTTCATTCTCAGTGGGGAAATAGGTATGTATTTCAGTATCCTACAATAAAATTAAATGATTCAATCTCTAAATACTTACAAAATTGTATACATAAATGATAAACCCTCAAAATCAAGCATTTGCTTAATTGTCAATTGTTAAGTTTACCAATTGATCACATGCAGATGGTCACGGATTGCCCGGAGATTACCAGGGAGAACCGATAATGAGATAAAGAACTATTGGAGGACACATATGAGGAAGAAAGCACAAGAGAAGAAGCGGGAAACATCTCCATCATCATCATCAACAACAACAACAACAACAACAAATTCTTCTACTTCATCAAACAACCGAGCAGTGAATTCAAAAACAGCTACTGAGACAACCGAAAGCTTTGACAGTACAGTAGTTGCTGATATGTCATCTATGCAAGGAAAAAAGTATCAGAAAGATGAGAGGGAGGAGGAAGAATTTTATTCCATGGATGATATATGGAAAGACATCACATCAGAAGAACCAATAAAACCAGTTTACAATGGCTATCGCGAAGGAAGCAACTTTTCTTGCCCTCCAATGGCTTCTCCATTGTGGGAATATTGTCCAGACACACTATGGAGACTGGAGGGAGATGAAAGTAAGATGTTTTTCCCCCCTAGTGATCAGTTTGTTCCCTGTTACCAACATGAGAATATGTCTTTAACTGGTTAGTTTAGCTTTAATCATATAATCCATGTCAAGCAAACTCCCTGTATAGTAAGGACTCATAATAGAAAAATTAGCTTTCTTGCACCACCCATAGTCCAATGAGCACTGTAACAATTCATGCATGATTATACACCTAGCCCCTAGGTAGTCCTATTTTCACTTTCTAGTTCCTGGTTATTTGTACGAGTTTCAATAAGTTGTATGTCCCTCAATGTAATGTATCATAAGCATGTCAATTATGTTGAAGTTGAACGGAAATTATTATTCATGTATTATGAATTTCTGATATCACACTCCCAAGTTTTTATCTGTTTTTCCTTGTGTGTTCAATAAGTCACAAATTTAACAATGCCACTATTACAGTTGTCTAGGCTAGGGGAAAGGAGAAACGGAAATCAAATAATGGATCATATCCTCTGTTTATATATTAGTTATGGAAAAAACAGAGATGTCATATCCTTGAGACAAATCCTCTTAGAACCTATAAAGCCATAAAGGGAGTTAGCCTGCCTTCCACTTGACCCTCTCTTTCCTTCCCCAGTTTCTTCCTGTTCTGCCTTATTCTGTTCCCAATTTAACTCAATTTTCACTTCATAATCCATAATAGCACAAGGATGCATGTTTCGGAAGTGGTGGTAGTGTCTATGTCTACGGATTTGAGAGACAGTCAACTAGTTGGTAAGTATTATGTTTATTATGAATGTAGAATGGACTTCAACAAATACTATAAAGATTAA ATGGTTCAAGAAGAAATCAGGAAGGGTCCATGGACAGAACAAGAAGACCTTCAACTGGTCTGCTTTGTGGGATTATTTGGGGACCGACGATGGGATTTCATAGCTAAAGTTTCAGGTTTAAAAAGAACAGGTAAGAGCTGCCGCTTACGATGGGTTAATTACCTGCATCCGGGGCTCAAAAGAGGAAAGATGACTCCTCATGAGGAGAAACTCGTCCTGGAGCTTCATTCTCAGTGGGGAAATAGATGGTCACGGATTGCCCGGAGATTACCAGGGAGAACCGATAATGAGATAAAGAACTATTGGAGGACACATATGAGGAAGAAAGCACAAGAGAAGAAGCGGGAAACATCTCCATCATCATCATCAACAACAACAACAACAACAACAAATTCTTCTACTTCATCAAACAACCGAGCAGTGAATTCAAAAACAGCTACTGAGACAACCGAAAGCTTTGACAGTACAGTAGTTGCTGATATGTCATCTATGCAAGGAAAAAAGTATCAGAAAGATGAGAGGGAGGAGGAAGAATTTTATTCCATGGATGATATATGGAAAGACATCACATCAGAAGAACCAATAAAACCAGTTTACAATGGCTATCGCGAAGGAAGCAACTTTTCTTGCCCTCCAATGGCTTCTCCATTGTGGGAATATTGTCCAGACACACTATGGAGACTGGAGGGAGATGAAAGTAAGATGTTTTTCCCCCCTAGTGATCAGTTTGTTCCCTGTTACCAACATGAGAATATGTCTTTAACTGGTTAGTTTAGCTTTAATCATATAATCCATGTCAAGCAAACTCCCTGTATAGTAAGGACTCATAATAGAAAAATTAGCTTTCTTGCACCACCCATAGTCCAATGAGCACTGTAACAATTCATGCATGATTATACACCTAGCCCCTAGGTAGTCCTATTTTCACTTTCTAGTTCCTGGTTATTTGTACGAGTTTCAATAAGTTGTATGTCCCTCAATGTAATGTATCATAAGCATGTCAATTATGTTGAAGTTGAACGGAAATTATTATTCATGTATTATGAATTTCTGATATCACACTCCCAAGTTTTTATCTGTTTTTCCTTGTGTGTTCAATAAGTCACAAATTTAACAATGCCACTATTACAGTTGTCTAGGCTAGGGGAAAGGAGAAACGGAAATCAAATAATGGATCATATCCTCTGTTTATATATTAGTTATGGAAAAAACAGAGATGTCATATCCTTGAGACAAATCCTCTTAGAACCTATAAAGCCATAAAGGGAGTTAGCCTGCCTTCCACTTGACCCTCTCTTTCCTTCCCCAGTTTCTTCCTGTTCTGCCTTATTCTGTTCCCAATTTAACTCAATTTTCACTTCATAATCCATAATAGCACAAGGATGCATGTTTCGGAAGTGGTGGTAGTGTCTATGTCTACGGATTTGAGAGACAGTCAACTAGTTGGTAAGTATTATGTTTATTATGAATGTAGAATGGACTTCAACAAATACTATAAAGATTAA ATGGTTCAAGAAGAAATCAGGAAGGGTCCATGGACAGAACAAGAAGACCTTCAACTGGTCTGCTTTGTGGGATTATTTGGGGACCGACGATGGGATTTCATAGCTAAAGTTTCAGGTTTAAAAAGAACAGGTAAGAGCTGCCGCTTACGATGGGTTAATTACCTGCATCCGGGGCTCAAAAGAGGAAAGATGACTCCTCATGAGGAGAAACTCGTCCTGGAGCTTCATTCTCAGTGGGGAAATAGATGGTCACGGATTGCCCGGAGATTACCAGGGAGAACCGATAATGAGATAAAGAACTATTGGAGGACACATATGAGGAAGAAAGCACAAGAGAAGAAGCGGGAAACATCTCCATCATCATCATCAACAACAACAACAACAACAACAAATTCTTCTACTTCATCAAACAACCGAGCAGTGAATTCAAAAACAGCTACTGAGACAACCGAAAGCTTTGACAGTACAGTAGTTGCTGATATGTCATCTATGCAAGGAAAAAAGTATCAGAAAGATGAGAGGGAGGAGGAAGAATTTTATTCCATGGATGATATATGGAAAGACATCACATCAGAAGAACCAATAAAACCAGTTTACAATGGCTATCGCGAAGGAAGCAACTTTTCTTGCCCTCCAATGGCTTCTCCATTGTGGGAATATTGTCCAGACACACTATGGAGACTGGAGGGAGATGAAAGTAAGATGTTTTTCCCCCCTAGTGATCAGTTTGTTCCCTGTTACCAACATGAGAATATGTCTTTAACTGGTTAG MVQEEIRKGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGLKRGKMTPHEEKLVLELHSQWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQEKKRETSPSSSSTTTTTTTNSSTSSNNRAVNSKTATETTESFDSTVVADMSSMQGKKYQKDEREEEEFYSMDDIWKDITSEEPIKPVYNGYREGSNFSCPPMASPLWEYCPDTLWRLEGDESKMFFPPSDQFVPCYQHENMSLTG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19100.1 vs. NCBI nr
Match: gi|731349121|ref|XP_010685834.1| (PREDICTED: transcription factor MYB59 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 449.1 bits (1154), Expect = 5.100e-123 Identity = 226/256 (88.28%), Postives = 239/256 (93.36%), Query Frame = 1
BLAST of Spo19100.1 vs. NCBI nr
Match: gi|902154896|gb|KNA05849.1| (hypothetical protein SOVF_186320 [Spinacia oleracea]) HSP 1 Score: 443.4 bits (1139), Expect = 2.800e-121 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo19100.1 vs. NCBI nr
Match: gi|870853438|gb|KMT05319.1| (hypothetical protein BVRB_7g174540 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 367.5 bits (942), Expect = 1.900e-98 Identity = 188/218 (86.24%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Spo19100.1 vs. NCBI nr
Match: gi|731392327|ref|XP_010651059.1| (PREDICTED: transcription factor MYB59 [Vitis vinifera]) HSP 1 Score: 344.4 bits (882), Expect = 1.800e-91 Identity = 182/268 (67.91%), Postives = 211/268 (78.73%), Query Frame = 1
BLAST of Spo19100.1 vs. NCBI nr
Match: gi|297746133|emb|CBI16189.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 341.7 bits (875), Expect = 1.100e-90 Identity = 176/261 (67.43%), Postives = 200/261 (76.63%), Query Frame = 1
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186320 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.900e-121 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZ79_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174540 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 1.400e-98 Identity = 188/218 (86.24%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Match: F6GV45_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04140 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 5.000e-93 Identity = 181/262 (69.08%), Postives = 210/262 (80.15%), Query Frame = 1
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Match: A0A061GXJ9_THECC (Myb domain protein 59 isoform 2 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 3.200e-84 Identity = 168/259 (64.86%), Postives = 196/259 (75.68%), Query Frame = 1
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Match: A0A061GY73_THECC (Myb domain protein 48 isoform 1 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.000e-82 Identity = 169/266 (63.53%), Postives = 197/266 (74.06%), Query Frame = 1
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 270.8 bits (691), Expect = 1.500e-71 Identity = 144/258 (55.81%), Postives = 175/258 (67.83%), Query Frame = 1
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.500e-71 Identity = 153/261 (58.62%), Postives = 186/261 (71.26%), Query Frame = 1
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.200e-63 Identity = 132/240 (55.00%), Postives = 163/240 (67.92%), Query Frame = 1
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.000e-62 Identity = 136/253 (53.75%), Postives = 170/253 (67.19%), Query Frame = 1
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.200e-35 Identity = 82/187 (43.85%), Postives = 120/187 (64.17%), Query Frame = 1
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Match: AT5G59780.3 (myb domain protein 59) HSP 1 Score: 270.8 bits (691), Expect = 8.700e-73 Identity = 144/258 (55.81%), Postives = 175/258 (67.83%), Query Frame = 1
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Match: AT3G46130.1 (myb domain protein 48) HSP 1 Score: 270.8 bits (691), Expect = 8.700e-73 Identity = 153/261 (58.62%), Postives = 186/261 (71.26%), Query Frame = 1
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Match: AT4G13480.1 (myb domain protein 79) HSP 1 Score: 174.9 bits (442), Expect = 6.500e-44 Identity = 75/111 (67.57%), Postives = 94/111 (84.68%), Query Frame = 1
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Match: AT3G24310.1 (myb domain protein 305) HSP 1 Score: 172.6 bits (436), Expect = 3.200e-43 Identity = 79/126 (62.70%), Postives = 100/126 (79.37%), Query Frame = 1
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Match: AT3G53200.1 (myb domain protein 27) HSP 1 Score: 169.9 bits (429), Expect = 2.100e-42 Identity = 72/109 (66.06%), Postives = 92/109 (84.40%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19100.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19100.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19100.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19100.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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