Spo19011 (gene)

Overview
NameSpo19011
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_114 : 724547 .. 725695 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGTCTTAGTTTAATACCCAGTAAGACTATTGCTCAGACTATTGTTTATACTAACGCTAATCTTGCCCTAATGTTGCTTGGTTTGGTCCGATTCGATATGTAATTTGGTTTAATTTGACAAATGTCAAACCGTATTTTTACGGTTTAATTTGAGTTTCATCCGAACCCCATCAAACCGGATTGGTTCACCCTTACCTAAAACAATATGACCAATACTTGATAAAATAGTTTCCTCTAATAAAACAATTTTGAACAAGTGATTGTTTGTTTGTTTGTTTTTTTCTTTTTTAATATTTTGATCGAGTGTTTGTTGCTAATGAAAAAGTTGACTAAAAATGATAATGAAGCAAGGCCGCAGCCCATAAATAATGATACTCCGTAGGAAAGAAGAGTGCGTGGCTTAGGGATCATAACTAGTCAACGCTAACCTGACCATTTTGCTTAAAGTATCCCACACTTCACATTCATACACATTAGTAATTTAGTATTAGTGCAACTATTGTCATACTCCCTCCGTCCCGGAATACTTGACCTGTTTTCTTTATCGGGCCGTCCCTTAATACTTGATCTGTTTCTAAAAATGGAAATATTTTAACAATATTATATTATTTCTCACTCCACCCCTATTAACCCACCTACCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCCTACTCTCCCCCAACCCCATCTCTTAACCCACCTCCCACTAACTACGTTAAAATAATACCCCACCATTAACTACTACCTATTAAATTAAATAAGTCAATTCAAATCCTTTAAACTCTGTGCCGGTCAAATCGGGTCGAGTATTCCGGAACGGAGGGAGTACCACCTAAACTTTTACTTTTCTAATTAAATAAATAAAGTAAATTGACAAAAATAACTCCGAAACAAAAATATAAAAACAAAAATAAATAAATGAAGAAGCATCCACCCCAATTTCATTTCAACACTTCTCTCTCTTTTTACTCAAAAGTCAACTCTCTCCTTATTTCTTTCCATTTCTCTCTCCCTCTCCTTCCCCGCCTATTCTCTCTCCTCCAACAAACTTCTTCTTTCTCTCTCCTCCATTTTCCACATTTTACACCTTCATTTCTTCATTAGCTATGAAATACTACTCTAATCTTTCATTTTAA

mRNA sequence

ATGGAATGTCTTAGTTTAATACCCAGTAAGACTATTGCTCAGACTATTGTTTATACTAACGCTAATCTTGCCCTAATGTTGCTTGGTTTGGTCCGATTCGATATTCAACTCTCTCCTTATTTCTTTCCATTTCTCTCTCCCTCTCCTTCCCCGCCTATTCTCTCTCCTCCAACAAACTTCTTCTTTCTCTCTCCTCCATTTTCCACATTTTACACCTTCATTTCTTCATTAGCTATGAAATACTACTCTAATCTTTCATTTTAA

Coding sequence (CDS)

ATGGAATGTCTTAGTTTAATACCCAGTAAGACTATTGCTCAGACTATTGTTTATACTAACGCTAATCTTGCCCTAATGTTGCTTGGTTTGGTCCGATTCGATATTCAACTCTCTCCTTATTTCTTTCCATTTCTCTCTCCCTCTCCTTCCCCGCCTATTCTCTCTCCTCCAACAAACTTCTTCTTTCTCTCTCCTCCATTTTCCACATTTTACACCTTCATTTCTTCATTAGCTATGAAATACTACTCTAATCTTTCATTTTAA

Protein sequence

MECLSLIPSKTIAQTIVYTNANLALMLLGLVRFDIQLSPYFFPFLSPSPSPPILSPPTNFFFLSPPFSTFYTFISSLAMKYYSNLSF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19011.1Spo19011.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19011.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19011.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19011.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19011.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0048513 animal organ development
biological_process GO:0045176 apical protein localization
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0048825 cotyledon development
biological_process GO:0010229 inflorescence development
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0007165 signal transduction
cellular_component GO:0005770 late endosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity
RNA-Seq Expression