Spo18958 (gene)

Overview
NameSpo18958
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
Locationchr4 : 19584491 .. 19587663 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAATGAGTTTTTTATGATTTGAAATAATCATCTGTTCACTTGTCGCTCACTTGTTCGCCATGGCAGTCCTGCACAGCTCTTAAACCACACTTTCTATCTCCTCAAATTGCCATCATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGGTAATTCAATTACTTCTTCATCATACCTTTATCATATTGCTTGTTCTTCACTAATTCTGTTGATATTTCTGCAATGGGCTTCCTGACATTGAAACAATGCTAATAATAGGGAAAATAATTGGAAAATCTACAGTGGGTTATCGAATTGTTTGTAGTGATATCGTAGAAAGACGAGTAATGCATTGATATTTTAAATGTTGGATAATGTCTCCATACATAGTAGTCTCCAATGGAAATACAGTGTGAAAGTTCTTTTCTTTGATATCATATTCTATTGCAAATCAAAATTTGTCGTTACTTACGTTGAATACCGGTTGAATGCAGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGTAAGTTTTCCAAACCATTTTTACTTTAACAAAGTATAAAAGATAGCTACATTGTGCCGGAGAGCTCAAAAAGTCTGTTCAAGACCTTGTGTTAGTGTTCCTTATTGACATAGAATTTTGAGAATACCTGAAATCCCTTTGAAATTGCATGTTGTTGTGAAGTTGTTTTGTAAATGTATACTTTAGCTAGATACATTGGTTTTTTTTTTTTAAATCCGAGCTGGTCTAGGGTCTATGCCCTCCATCGGAAATGCTCCTTTGATTCTCAAGTCAATATCTGTCTGAACAATATATTATGGTTGATCATTAATTTGTTTTTAAAGGGGAAAAAGTGATAGAGTGGGAAAGCATGCATCAGTTAGTTGTGCATATGTAGCATTGGTATGAGTTGCCTAAAAAGATATTAATAGGTGTGAATGTCGGTTTAGTGGTGTTTTGTCTTGGGCCATTAGCCAGCTCAACTAGGTGATCGCTTGGTTTTAGGAATGAGGCGTTTCACCTGCTTAAGCTTGACAAAATGTGTGCTTTTGAAGATCTTCACCCACTTTCACTTTCTTTCTTTCTTAAGTTGTTGGACCTGGATCTTTAGTGGTTGCAGAAATAGAGCTGATGAAGTGTTAATGTCTTAAACAAAAAAGGCCTAGCGCAAGAACGCCTCACTATTTGTTTACTGGTCTGCTTCAAACTTTATACAGTCCTCGATTGTCAGTTTTTGAAAAGATTTTACTTGATTGAGGCTATATAATTTCGGTTATTCGTAATTTGTTGATGGGATGACATAAGGAGGCAAAGTAGAGTATCTAAGACTGACTAATGAACCTGCTTTTTGGAGTTGCAGTACTAGTGTACGAAAACAATCCTTCTAAATCTGTATCTGAACAGAACTATTTCCTACAAGTCATTTATTGTTCCCAACCTACACCAGATCTTAATCATTTTAAGAAATATGGTTTGTTCTGAAAAAACTAAAAAGTGTGTGCTATGCTTCACGTCTGTATTTGGATCAGCTAAATTAAATTATCAGTTATCTACTTATCTGATCTTTATTGTCAATGGTATATGAAGAGGAGAAAACATGTAAATGCCAGACTACTGTATCTTGCTTGTCTTGTTCTAGGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGGTAAATAAAGTAAAGACAGTCCTTGGTCATGATTTTGTATTCCTGCTCTATTCTAATTTTTACCTTGGAATAGTTCCTTAATGTGTTTGTTGAATACAAAGGGTGTGGCACTACAAGTTCTAGTGCTGATAAAGAAATGTTTTCTTTGTTTTGGTTTGTTGGTTCCTTTAGGGCCTTGGGGAAGGGGGGAAGNGGGGGGGGGGGGGTGGGGGTGGGGTGGCAGGGAGGTTGGGGAGGTCAATTGACGAAAGTTAGTGAGATTGAATTAAATAGTTACTTTTCAGGTGTTAAGATTTTCGGAATTGCTGAAAACGGTTACTAAGAGCAATGTCAAGAATCTATCTGCTTGATGTTAGTTGTTGAAAAGATGCCATGCTTTGATTTTTTAGTTGCATTCTTTCGCTCCTCTTTTGAGCTGGACATTTACTGTGGTACTTTTTTCCTCACTTTCAAGCAGAGTGACTTGTGCAGTTCTTAAGGGGGGGNGGGGGGGGGGGGGGGGTGTAATTTACTGGAAAAAATATCTTGCAAAAACCTTTCATCTTCACTAAAAAATTTGACCTTTCTTGTTCTCTTGTATAATCACGTACAAGAGTATTCAAACATATTGAGTTTTACTCTTTGCTGTACATGCGTAGATTGTGGCCAATTTCTGGTTTAAATCCCTGATATATTAAAATGGTGGTTCATGTTTTCAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTGTATGTTATGCATAAAGTAAATTTGTTGCTTACTTAAAGCATTTGGTAGCTTCTTCATCCTAACTGATTCCTCTATAATGATCTGCTCTGCTGCAATGCAGCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

mRNA sequence

TAAAAATGAGTTTTTTATGATTTGAAATAATCATCTGTTCACTTGTCGCTCACTTGTTCGCCATGGCAGTCCTGCACAGCTCTTAAACCACACTTTCTATCTCCTCAAATTGCCATCATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

Coding sequence (CDS)

ATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

Protein sequence

MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSSLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18958.1Spo18958.1mRNA


Homology
[Close]
BLAST of Spo18958.1 vs. NCBI nr
Match: gi|902153190|gb|KNA05677.1| (hypothetical protein SOVF_188100 [Spinacia oleracea])

HSP 1 Score: 498.8 bits (1283), Expect = 5.900e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS
Sbjct: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT
Sbjct: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT
Sbjct: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG
Sbjct: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AAKKTSRAIGHATKTLMNLISGGETISEENE
Sbjct: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 271
[Close]
BLAST of Spo18958.1 vs. NCBI nr
Match: gi|731326801|ref|XP_010674203.1| (PREDICTED: uncharacterized protein LOC104890420 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 367.1 bits (941), Expect = 2.700e-98
Identity = 208/271 (76.75%), Postives = 229/271 (84.50%), Query Frame = 1 

		  

Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLP LLPS   T TTSLTL  HF  S S SP NS +F KPR   PLSSF RRK ST  S
Sbjct: 1   MKLPLLLPS---THTTSLTLLPHFIISTSNSPHNSRVFLKPRNFSPLSSFTRRKSSTLVS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSS EL DSNSI ++ Q Q+ +S+NR+EFVEI+NPN PPF+SSWRSKFS SDQAFFLLT
Sbjct: 61  LNSSNELNDSNSITEEIQTQRYDSDNRAEFVEIKNPNFPPFISSWRSKFSFSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAF+  VAA VPTLYAMGRAANSFAKLADTAREELPST+ AIRLSGIE+SDLT
Sbjct: 121 FIACTTSVAFVGFVAAAVPTLYAMGRAANSFAKLADTAREELPSTMTAIRLSGIEVSDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEIS GVNKSA+AVQAAK G +QIGSIAREQT+SMI ERA+LP IS QPVVSG
Sbjct: 181 VELSDLSQEISEGVNKSAQAVQAAKLGMQQIGSIAREQTISMIQERASLPVISMQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AA+KTSRA+GHAT+TLMN ISG E+I+EE E
Sbjct: 241 AARKTSRAVGHATRTLMNFISGRESIAEETE 268
[Close]
BLAST of Spo18958.1 vs. NCBI nr
Match: gi|566199502|ref|XP_002319133.2| (hypothetical protein POPTR_0013s04950g [Populus trichocarpa])

HSP 1 Score: 256.5 bits (654), Expect = 5.100e-65
Identity = 163/273 (59.71%), Postives = 204/273 (74.73%), Query Frame = 1 

		  

Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA SF+KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSFSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNIISRGEFNSENED 274
[Close]
BLAST of Spo18958.1 vs. NCBI nr
Match: gi|743873614|ref|XP_011034438.1| (PREDICTED: uncharacterized protein LOC105132565 [Populus euphratica])

HSP 1 Score: 255.0 bits (650), Expect = 1.500e-64
Identity = 162/273 (59.34%), Postives = 204/273 (74.73%), Query Frame = 1 

		  

Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+  P HF   ++ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPHPNHFL--SAISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+ D++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLDADEM-----ERNLN-------VQVGNPVVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA S +KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSLSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNMISRGEFNSENED 274
[Close]
BLAST of Spo18958.1 vs. NCBI nr
Match: gi|224123658|ref|XP_002319134.1| (hypothetical protein POPTR_0013s04950g [Populus trichocarpa])

HSP 1 Score: 248.4 bits (633), Expect = 1.400e-62
Identity = 163/283 (57.60%), Postives = 204/283 (72.08%), Query Frame = 1 

		  

Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLY----------AMGRAANSFAKLADTAREELPSTVAA 185
           L+FIACTTS+AF SLV A VPTLY          AMG+AA SF+KLADTAREELPST+AA
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYVSYLTLHLSAAMGKAATSFSKLADTAREELPSTMAA 199

Query: 186 IRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERAN 245
           IRLSG+EISDLT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+
Sbjct: 200 IRLSGMEISDLTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERAS 259

Query: 246 LPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           LP IS QPVV+GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 LPIISLQPVVAGAAKKTSRAVGQATKTIMNIISRGEFNSENED 284
[Close]
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188100 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 4.100e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS
Sbjct: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT
Sbjct: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT
Sbjct: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG
Sbjct: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AAKKTSRAIGHATKTLMNLISGGETISEENE
Sbjct: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 271
[Close]
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP99_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076980 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.900e-98
Identity = 208/271 (76.75%), Postives = 229/271 (84.50%), Query Frame = 1 

		  

Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLP LLPS   T TTSLTL  HF  S S SP NS +F KPR   PLSSF RRK ST  S
Sbjct: 1   MKLPLLLPS---THTTSLTLLPHFIISTSNSPHNSRVFLKPRNFSPLSSFTRRKSSTLVS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSS EL DSNSI ++ Q Q+ +S+NR+EFVEI+NPN PPF+SSWRSKFS SDQAFFLLT
Sbjct: 61  LNSSNELNDSNSITEEIQTQRYDSDNRAEFVEIKNPNFPPFISSWRSKFSFSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAF+  VAA VPTLYAMGRAANSFAKLADTAREELPST+ AIRLSGIE+SDLT
Sbjct: 121 FIACTTSVAFVGFVAAAVPTLYAMGRAANSFAKLADTAREELPSTMTAIRLSGIEVSDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEIS GVNKSA+AVQAAK G +QIGSIAREQT+SMI ERA+LP IS QPVVSG
Sbjct: 181 VELSDLSQEISEGVNKSAQAVQAAKLGMQQIGSIAREQTISMIQERASLPVISMQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AA+KTSRA+GHAT+TLMN ISG E+I+EE E
Sbjct: 241 AARKTSRAVGHATRTLMNFISGRESIAEETE 268
[Close]
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9I5T4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04950g PE=4 SV=2)

HSP 1 Score: 256.5 bits (654), Expect = 3.600e-65
Identity = 163/273 (59.71%), Postives = 204/273 (74.73%), Query Frame = 1 

		  

Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA SF+KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSFSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNIISRGEFNSENED 274
[Close]
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9I5T5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04950g PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.700e-63
Identity = 163/283 (57.60%), Postives = 204/283 (72.08%), Query Frame = 1 

		  

Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLY----------AMGRAANSFAKLADTAREELPSTVAA 185
           L+FIACTTS+AF SLV A VPTLY          AMG+AA SF+KLADTAREELPST+AA
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYVSYLTLHLSAAMGKAATSFSKLADTAREELPSTMAA 199

Query: 186 IRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERAN 245
           IRLSG+EISDLT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+
Sbjct: 200 IRLSGMEISDLTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERAS 259

Query: 246 LPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           LP IS QPVV+GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 LPIISLQPVVAGAAKKTSRAVGQATKTIMNIISRGEFNSENED 284
[Close]
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9NDH9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s04580g PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.000e-60
Identity = 154/272 (56.62%), Postives = 200/272 (73.53%), Query Frame = 1 

		  

Query: 3   LPWLLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNRRKFSTFS-- 62
           L  L  +++P P  S+  P HF   + +SP PNS+  ++   +   S+  R++ S  +  
Sbjct: 17  LTLLSRNSIPFPRNSIPHPNHFL--SIVSPHPNSSKHYRLLPICSSSNPARKQSSPANEE 76

Query: 63  SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLL 122
           SLNS++E+   + +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFLL
Sbjct: 77  SLNSNVEVLGGDEL-----ERNLN-------VQVANPVVPSYIQSW-TKLSLSDQAFFLL 136

Query: 123 TFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDL 182
           +FIA TTS+AF  LVAA VPTL+A+GRAA S +KLADTAREELPST+AAIRLSG+EISDL
Sbjct: 137 SFIAFTTSIAFTCLVAAAVPTLFAVGRAATSLSKLADTAREELPSTMAAIRLSGMEISDL 196

Query: 183 TVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVS 242
           T+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + T+SMI ERA+LP IS QPVV+
Sbjct: 197 TLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGTLAHQHTISMIQERASLPIISLQPVVA 256

Query: 243 GAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           GAAKKTSRA+G ATKT+MN+IS GE  +EE E
Sbjct: 257 GAAKKTSRAVGQATKTIMNIISRGEFNTEEKE 273
[Close]
BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Match: AT1G08530.1 (unknown protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.600e-56
Identity = 117/157 (74.52%), Postives = 138/157 (87.90%), Query Frame = 1 

		  

Query: 107 SKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTV 166
           +K SLSDQAF LL FI CTTSVAF SLV   +PTL AMGRAA SFAKLADTAR+ELPST+
Sbjct: 96  AKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAMGRAATSFAKLADTARKELPSTL 155

Query: 167 AAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHER 226
           AA+RLSG+EISDLT+ELSDLSQ+I+ G+NKSAKAVQAA+ G +QIG++A++QT+SMI ER
Sbjct: 156 AAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAAEAGIKQIGTLAQQQTLSMIEER 215

Query: 227 ANLPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGG 264
           ANLP IS QPVV+GAA+KTS AIG ATK LMN+I+GG
Sbjct: 216 ANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITGG 252
[Close]
BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Match: AT5G09995.2 (unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.600e-16
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 1 

		  

Query: 34  NSTLFFKPRYLFPLSSFNRRKFSTFSSLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEI 93
           +  L F+ R    L+S      S  +  + SI     +++    QE  ++S+  S   + 
Sbjct: 27  DKNLSFRRRVTLRLAS----PISRLTKGSDSIASSTPSALYSNPQEPSISSQLTSSVGQ- 86

Query: 94  RNPNVPPF-VSSWRSKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFA 153
                PP  +S W    + + + F LL  +AC T+++   L  A +PTL A  +AA S  
Sbjct: 87  -----PPLQLSQW----TFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLE 146

Query: 154 KLADTAREELPSTVAAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQI 212
           KL D  REELP T+AA+RLSG+EISDLT+ELSDL Q I+ GV  S +A++ A+   R++
Sbjct: 147 KLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRL 191
The following BLAST results are available for this feature:
BLAST of Spo18958.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902153190|gb|KNA05677.1|5.9e-138100.hypothetical protein SOVF_1881... [more]
gi|731326801|ref|XP_010674203.1|2.7e-9876.7PREDICTED: uncharacterized pro... [more]
gi|566199502|ref|XP_002319133.2|5.1e-6559.7hypothetical protein POPTR_001... [more]
gi|743873614|ref|XP_011034438.1|1.5e-6459.3PREDICTED: uncharacterized pro... [more]
gi|224123658|ref|XP_002319134.1|1.4e-6257.6hypothetical protein POPTR_001... [more]
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BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QEJ0_SPIOL4.1e-138100.Uncharacterized protein OS=Spi... [more]
A0A0J8CP99_BETVU1.9e-9876.7Uncharacterized protein OS=Bet... [more]
B9I5T4_POPTR3.6e-6559.7Uncharacterized protein OS=Pop... [more]
B9I5T5_POPTR9.7e-6357.6Uncharacterized protein OS=Pop... [more]
B9NDH9_POPTR2.0e-6056.6Uncharacterized protein OS=Pop... [more]
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BLAST of Spo18958.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G08530.11.6e-5674.5unknown protein[more]
AT5G09995.21.6e-1636.3unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33825FAMILY NOT NAMEDcoord: 11..271
score: 7.2E
NoneNo IPR availablePANTHERPTHR33825:SF5SUBFAMILY NOT NAMEDcoord: 11..271
score: 7.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009414 response to water deprivation
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0015976 carbon utilization
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009987 cellular process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0050832 defense response to fungus
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0030091 protein repair
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0048481 plant ovule development
biological_process GO:0032259 methylation
biological_process GO:0006560 proline metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0015979 photosynthesis
biological_process GO:0010218 response to far red light
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0005840 ribosome
cellular_component GO:0044464 cell part
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009348 ornithine carbamoyltransferase complex
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008430 selenium binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
RNA-Seq Expression