Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTATAACTAATAGAAGTTTTTAGAAACATTTGCTAATTCTGATGTTCTGTAACAGATAGACACGCCATCCTCGACGTCAGCAGCTGCTTCCAGTTTCAGAACCAACTCCCTCCTTTCCTTTCACAGTTTCACCATTCTTCATTCATTTTTATAAAAAGGCAATTAGTTTACCTCAAAATAAATCAAAATCAAAATCAAAATCAAAATCAAAATTTTATTAAAACCCTTCATTTTTATTTAATTCAACCATCTTCTATAATTTTCCACGATTCAGCGAACAACAATCAATTTGATTTATCGAGATTAACGGTCGAAAGTCGAAACAGGTTCGTTCTTAGTTGTTACCAAACTTTTTCATGTTAAAAAATAAAATACTTTCCCTCATTTGTAAGATTAAAATTCGAAATCGAAATTGTTCTCCAATACCGCAATGCAGGTTTTTGTTGTAGAATTCTTTGCTTCATTTTTCTGTTTTGAATTTGTTCTTGTTCGGTTGCTTATTATAAGTAAGCTTTTTGGTTAATATGTTGATTTAATTTTGAAAACCGAGTCAATTTTTGTTGTTGTGGCAGTATCTTATTCAAAGGAAATGCATTCGAAATCGCCGAAAAATGTGGTAGTGGTGGGAGGAGGAATTGCTGGTGCTCTTGTTGCTAAGCATCTTCAGAATCATGCCCACGTCACTTTAATAGATCCGTATGTCTTTTTTCTTTTCTTATTCGATTAAAATTGTTTTAACATTTGTGCAAACAGTAATTGTGTGCAAACAGTAATCGTAAACCGACCAGTTGTAAGATAGAATTGACTCGGTAGAAGGAAGTTTGTCCAATACCAAGATTTTAGCGGTTTTATTGTTAATGTGTATTTAGTATTGCCAAGCGGTCCAATACATGGTCCGGGGAAATATGTGTATTTAGGGAGCCTTACAGAATTCTAGCCTTGTAGGTGGGTTTGGAGAGAAAAAGAATATGTCAAAAAATTACCTTAAAGATGAATTGAGTAAAAACTTTGAGGAATTCAGTTTAAGGAACTATGAAAAGTGATGTAGGAAGGGATTACAATTGTTTGTTTTAAAGTTTTCTGAGGAACTTTACAATGGTTGCGCTTCTGTCCCTTTCTATAATTTATCTTACTTAATCATGGACCTACATATTTTATTTATTCGTAAAAAGAACATTAAAAAATTCAAACCTCCCCCAACCCCACCACTTTATTTGACACATTTCCACTAACTATATTTTAAAAAATACTCCACTATCAACTACCACCTAATCAATTAATAAATTAATTAAATTGCCTAAAATCCTGTGCCGGTCAAACTGGGAACGAGTATCAAAGGACAAAGGGAGTATCATTTTGAATGATGCACTTGTTAAAAAGAAGAGATTATGGTTTTGTGAACACACGCAAAATTTACTTAAACGAGAAGTGTGAACGTTCTTTTTGGACGGGTGAAAAAGAAACGTGTAAACCTTATAAAGGGGTAGTTAATACCAAAATTATTAAAATCGCAATTCAAATGTAGAATTTTACGATTCTACGATTTAAAATGTGGTCTTACGATTCGATTTACGATTCTACACGTTTTTCTACAATAGATAAATATTGTTAATTATTGCTTATTTAGCTCGTAAACAACTATGTATTTCAATAAGTATGTTTTTCACCTATAATGTAAAATTCAATGAAATTTGAAAATAAAATCAATTCTACAATTCGATTTATGATTCGATTCTAAGAGTCACTTTCGATTCAAAGTACAATCCCGATTTTGATAACCTTGGTTAATACGGAATAATGATTTATGAAACTTTTACAAAATTTGAATCCTATTTACATCACACCTCATATTTGTTCGTACTTAATGTTTACTCTTTGAAACTAAAAATTATCGATTTACTAGTACTTTTGTTCAATGTGATTACTGTTTTTGATTGAATAAATTTGATTTTACTGACTAAAATTAACTTTCTAGATTTTAATTTATTTATGAACTGCTATAAAATAAGGATAACACAGATAAACCTAGACTTGGAAGCTCCTGCAGTCCTGTGTATGAGTGTATCTATTGGCTTTAATACCTTTAATAGCCTAGTAAGGCTCTAATAGTCCAATATACCCAATATGCTTACATTGTTGGAGGGCTGGATGATGCAGTCATGCATCAGTGGAGTCTAGTTTTTTTTTTCTGCTGTTATGCTTACATTGTTCCTTGTTTAGATACTATTTTGTACTTTATATTCTCTTCATATTTTTGTAATTTGACAAGTATCTGTAAAAAAATTGAACAGAAAGGAGTATTTTGAGATCATATGGGCTTCCATGAGATCAATGGTGGATCAATCATTTGCTGAAAGGTCTACAGTAGACTACAGTGAATTTCTGCCACAAGTGAAGTTAATTACTTCTTATGCGGCAAATATCACAGAGAGTGAAGTCTTAACTGCAAAGGGTGATCGTGTTCCATATGATTACCTTGTAATTGCCACAGGTCACGTGTATTCTGATCCTATCACCAGAACTGAAGGGCTTATCAAGTACCAAGAAGGTCAGTTATCTAACTTCTAATACTTCATAAGAAATCATAAAATACATTTTGTTCCAAACTTTTGTATTTTGTTCCAAAATACTTTATTGGGGCTAAGCAATAATGATTAATGACCATCAAAGCTGATCTAATTTGTGTTTGTATTAATTGGTGCAGCATTTGATAAGATAAAATCTTCAAGTTCAATATTGATCATTGGAGGTGGGCCTAGTGGTGTAGAGCTTGCTGGTGAAATAGTGAATGAGTTTCCTGATAAGAAAATTACTCTGGTTCATCGTGGACCTAGACTGCTTCAGTTTATTGGGTCCAAGGCATCACAGAAGGGTTTGGAGTGGTTGACCTCAAAGAAAGTTGAAGTGATCCTTAACCAATCTGTCAATTTGACACCAACTTTAGAAGGTGTTTATCAAACTTCTGGTGGAGAGACAATAGTTGCTGATCATTATATCAACTGCACTGGGATTCAGTCAGGGTCTTCATGGCTCAAGGATACAATAGTAATGAACAATTTGGATATGCATGGGAAATTGATTGTTGATAAGCACTTGAGGGTCGATGGTCATAGAAACATCTTTGCTATTGGTGATATTACAAATCTTCCAGTGAGTCCTCCTATATCTTTTCACATATATTTTTTCTTTGAGCCACTGGATATTCATCATATTAAAATTTAGAATAGTTGTTTTCTTCAACATGTACAAATTTCTTCAAGTTGTTTTCCTCTCATCTAGACTAATTGGTTATAGACAATTGTGACAGTATAATGAAAGTCATATGATCTACTTTTTCATCCACTAATTTGTTTCTGGTTTGCGCTGCACAATACTACACTAGGCAAATTTTGTCTCTCAATTGTGCAATGGCTTTTTGCACGAGCTTCCATTTCTGCCTAGGATTCCATAAAATGAAATTCAAGATTTTGTGCACACTTTTGGAGAATAATTCTTTATTAATCTTGCTTTTGTTTTCTTTTTGGGTTTCTATACCTGAAAAGTTCTTATGGCTGCCTAAAATAATTAACAATATTTTATCTACATGTCAGAGAGTCCAGTTTGACATCCCAACATATTAGTCTCAGTCATTTTAGCGACTCTGTTCTTTTGAGGAGTCTGAACAATGATTGAAAACTGTATGCATGCAATGTGTGAGGTGGCATGCATAAATTCATGCATGTTTAAATTTAGATGGTACTCCGTACAATATATTTTCATAGGCATACCAGCTTAATCTCCATTCCTTTTGCAGGAACTAAAACAAGGTTATTTGGCTATGAGACATGCTGACTTAACTGCAAAGAATATGAAGTTGTTGCTTGTAGGAGGAACCGAGGAGAAAATGGCCGTTTACAAGCCTGGTCGATCTATAGCATTTGTTTCACTGGGAAAGAAAGATGCTGTTGCAGAAATCAATGGCTTTACTATGAGTGGTTGTTTTCCTGGATTGATTAAATCAGGAGATTTGTTTGTGGGGAAAACAAGGAAGACATATGGGTTACAGTCTTAACCCTGAAAATGCTAACAAATAGGTATGTGCCGGAAGGGGATTTCATTGCATATACTACGAGCTATTCTGTAGTTGGGACTTGGGAGGTTGCTTCAATTGAATATGTTCTAAGAGACTAATTATCAAGTTTGGTGTTCTATGATTTATGTGATTATCAAGTTTGCTGCAATAAAATGATATTTCTTAAATTGCAATAATTAATATGTCAAGTTTGAGGGTTTGTTTGTGCTTCCTTGCCTATTGGGCTGATTATTTGTCCGATTTGGTGATTATTTGTCCGATTTGGTGAATATGTTTACATTTGAAGACATTGCTGTATTTTGCTTTTTTGCTTAAAGCAGTAAAGAAATGCAATTGCTCCAAGGCAACATTTCAT CAGTATAACTAATAGAAGTTTTTAGAAACATTTGCTAATTCTGATGTTCTGTAACAGATAGACACGCCATCCTCGACGTCAGCAGCTGCTTCCAGTTTCAGAACCAACTCCCTCCTTTCCTTTCACAGTTTCACCATTCTTCATTCATTTTTATAAAAAGGCAATTAGTTTACCTCAAAATAAATCAAAATCAAAATCAAAATCAAAATCAAAATTTTATTAAAACCCTTCATTTTTATTTAATTCAACCATCTTCTATAATTTTCCACGATTCAGCGAACAACAATCAATTTGATTTATCGAGATTAACGGTCGAAAGTCGAAACAGTATCTTATTCAAAGGAAATGCATTCGAAATCGCCGAAAAATGTGGTAGTGGTGGGAGGAGGAATTGCTGGTGCTCTTGTTGCTAAGCATCTTCAGAATCATGCCCACGTCACTTTAATAGATCCAAAGGAGTATTTTGAGATCATATGGGCTTCCATGAGATCAATGGTGGATCAATCATTTGCTGAAAGGTCTACAGTAGACTACAGTGAATTTCTGCCACAAGTGAAGTTAATTACTTCTTATGCGGCAAATATCACAGAGAGTGAAGTCTTAACTGCAAAGGGTGATCGTGTTCCATATGATTACCTTGTAATTGCCACAGGTCACGTGTATTCTGATCCTATCACCAGAACTGAAGGGCTTATCAAGTACCAAGAAGCATTTGATAAGATAAAATCTTCAAGTTCAATATTGATCATTGGAGGTGGGCCTAGTGGTGTAGAGCTTGCTGGTGAAATAGTGAATGAGTTTCCTGATAAGAAAATTACTCTGGTTCATCGTGGACCTAGACTGCTTCAGTTTATTGGGTCCAAGGCATCACAGAAGGGTTTGGAGTGGTTGACCTCAAAGAAAGTTGAAGTGATCCTTAACCAATCTGTCAATTTGACACCAACTTTAGAAGGTGTTTATCAAACTTCTGGTGGAGAGACAATAGTTGCTGATCATTATATCAACTGCACTGGGATTCAGTCAGGGTCTTCATGGCTCAAGGATACAATAGTAATGAACAATTTGGATATGCATGGGAAATTGATTGTTGATAAGCACTTGAGGGTCGATGGTCATAGAAACATCTTTGCTATTGGTGATATTACAAATCTTCCAGAACTAAAACAAGGTTATTTGGCTATGAGACATGCTGACTTAACTGCAAAGAATATGAAGTTGTTGCTTGTAGGAGGAACCGAGGAGAAAATGGCCGTTTACAAGCCTGGTCGATCTATAGCATTTGTTTCACTGGGAAAGAAAGATGCTGTTGCAGAAATCAATGGCTTTACTATGAGTGGTTGTTTTCCTGGATTGATTAAATCAGGAGATTTGTTTGTGGGGAAAACAAGGAAGACATATGGGTTACAGTCTTAACCCTGAAAATGCTAACAAATAGGTATGTGCCGGAAGGGGATTTCATTGCATATACTACGAGCTATTCTGTAGTTGGGACTTGGGAGGTTGCTTCAATTGAATATGTTCTAAGAGACTAATTATCAAGTTTGGTGTTCTATGATTTATGTGATTATCAAGTTTGCTGCAATAAAATGATATTTCTTAAATTGCAATAATTAATATGTCAAGTTTGAGGGTTTGTTTGTGCTTCCTTGCCTATTGGGCTGATTATTTGTCCGATTTGGTGATTATTTGTCCGATTTGGTGAATATGTTTACATTTGAAGACATTGCTGTATTTTGCTTTTTTGCTTAAAGCAGTAAAGAAATGCAATTGCTCCAAGGCAACATTTCAT ATGCATTCGAAATCGCCGAAAAATGTGGTAGTGGTGGGAGGAGGAATTGCTGGTGCTCTTGTTGCTAAGCATCTTCAGAATCATGCCCACGTCACTTTAATAGATCCAAAGGAGTATTTTGAGATCATATGGGCTTCCATGAGATCAATGGTGGATCAATCATTTGCTGAAAGGTCTACAGTAGACTACAGTGAATTTCTGCCACAAGTGAAGTTAATTACTTCTTATGCGGCAAATATCACAGAGAGTGAAGTCTTAACTGCAAAGGGTGATCGTGTTCCATATGATTACCTTGTAATTGCCACAGGTCACGTGTATTCTGATCCTATCACCAGAACTGAAGGGCTTATCAAGTACCAAGAAGCATTTGATAAGATAAAATCTTCAAGTTCAATATTGATCATTGGAGGTGGGCCTAGTGGTGTAGAGCTTGCTGGTGAAATAGTGAATGAGTTTCCTGATAAGAAAATTACTCTGGTTCATCGTGGACCTAGACTGCTTCAGTTTATTGGGTCCAAGGCATCACAGAAGGGTTTGGAGTGGTTGACCTCAAAGAAAGTTGAAGTGATCCTTAACCAATCTGTCAATTTGACACCAACTTTAGAAGGTGTTTATCAAACTTCTGGTGGAGAGACAATAGTTGCTGATCATTATATCAACTGCACTGGGATTCAGTCAGGGTCTTCATGGCTCAAGGATACAATAGTAATGAACAATTTGGATATGCATGGGAAATTGATTGTTGATAAGCACTTGAGGGTCGATGGTCATAGAAACATCTTTGCTATTGGTGATATTACAAATCTTCCAGAACTAAAACAAGGTTATTTGGCTATGAGACATGCTGACTTAACTGCAAAGAATATGAAGTTGTTGCTTGTAGGAGGAACCGAGGAGAAAATGGCCGTTTACAAGCCTGGTCGATCTATAGCATTTGTTTCACTGGGAAAGAAAGATGCTGTTGCAGAAATCAATGGCTTTACTATGAGTGGTTGTTTTCCTGGATTGATTAAATCAGGAGATTTGTTTGTGGGGAAAACAAGGAAGACATATGGGTTACAGTCTTAA MHSKSPKNVVVVGGGIAGALVAKHLQNHAHVTLIDPKEYFEIIWASMRSMVDQSFAERSTVDYSEFLPQVKLITSYAANITESEVLTAKGDRVPYDYLVIATGHVYSDPITRTEGLIKYQEAFDKIKSSSSILIIGGGPSGVELAGEIVNEFPDKKITLVHRGPRLLQFIGSKASQKGLEWLTSKKVEVILNQSVNLTPTLEGVYQTSGGETIVADHYINCTGIQSGSSWLKDTIVMNNLDMHGKLIVDKHLRVDGHRNIFAIGDITNLPELKQGYLAMRHADLTAKNMKLLLVGGTEEKMAVYKPGRSIAFVSLGKKDAVAEINGFTMSGCFPGLIKSGDLFVGKTRKTYGLQS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18875.1 vs. NCBI nr
Match: gi|902131342|gb|KNA04260.1| (hypothetical protein SOVF_201260 [Spinacia oleracea]) HSP 1 Score: 712.2 bits (1837), Expect = 4.500e-202 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 1
BLAST of Spo18875.1 vs. NCBI nr
Match: gi|731376378|ref|XP_010667547.1| (PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 584.7 bits (1506), Expect = 1.100e-163 Identity = 288/348 (82.76%), Postives = 315/348 (90.52%), Query Frame = 1
BLAST of Spo18875.1 vs. NCBI nr
Match: gi|731376382|ref|XP_010667548.1| (PREDICTED: apoptosis-inducing factor 2-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 508.4 bits (1308), Expect = 9.800e-141 Identity = 252/306 (82.35%), Postives = 275/306 (89.87%), Query Frame = 1
BLAST of Spo18875.1 vs. NCBI nr
Match: gi|359487025|ref|XP_002266714.2| (PREDICTED: apoptosis-inducing factor 2 isoform X1 [Vitis vinifera]) HSP 1 Score: 449.5 bits (1155), Expect = 5.400e-123 Identity = 220/348 (63.22%), Postives = 280/348 (80.46%), Query Frame = 1
BLAST of Spo18875.1 vs. NCBI nr
Match: gi|659091803|ref|XP_008446741.1| (PREDICTED: apoptosis-inducing factor 2-like [Cucumis melo]) HSP 1 Score: 449.5 bits (1155), Expect = 5.400e-123 Identity = 216/353 (61.19%), Postives = 274/353 (77.62%), Query Frame = 1
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAG8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_201260 PE=4 SV=1) HSP 1 Score: 712.2 bits (1837), Expect = 3.100e-202 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 1
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5Y3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009530 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 7.500e-164 Identity = 288/348 (82.76%), Postives = 315/348 (90.52%), Query Frame = 1
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B672_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009530 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 6.800e-141 Identity = 252/306 (82.35%), Postives = 275/306 (89.87%), Query Frame = 1
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Match: D7T3C0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0073g00310 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.800e-123 Identity = 220/348 (63.22%), Postives = 280/348 (80.46%), Query Frame = 1
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Match: A5C5M6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040675 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 8.400e-123 Identity = 219/348 (62.93%), Postives = 280/348 (80.46%), Query Frame = 1
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Match: AIFM2_TAEGU (Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.100e-42 Identity = 114/364 (31.32%), Postives = 190/364 (52.20%), Query Frame = 1
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Match: AIFA_DICDI (Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum GN=aifA PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.700e-42 Identity = 122/373 (32.71%), Postives = 194/373 (52.01%), Query Frame = 1
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Match: AIFM2_HUMAN (Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.800e-41 Identity = 109/362 (30.11%), Postives = 190/362 (52.49%), Query Frame = 1
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Match: AIFM2_XENTR (Apoptosis-inducing factor 2 OS=Xenopus tropicalis GN=aifm2 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.100e-40 Identity = 111/364 (30.49%), Postives = 183/364 (50.27%), Query Frame = 1
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Match: AIFM2_XENLA (Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.000e-40 Identity = 105/361 (29.09%), Postives = 184/361 (50.97%), Query Frame = 1
BLAST of Spo18875.1 vs. TAIR (Arabidopsis)
Match: AT3G44190.1 (FAD/NAD(P)-binding oxidoreductase family protein) HSP 1 Score: 424.5 bits (1090), Expect = 6.500e-119 Identity = 208/349 (59.60%), Postives = 270/349 (77.36%), Query Frame = 1
BLAST of Spo18875.1 vs. TAIR (Arabidopsis)
Match: AT5G22140.1 (FAD/NAD(P)-binding oxidoreductase family protein) HSP 1 Score: 423.3 bits (1087), Expect = 1.500e-118 Identity = 207/353 (58.64%), Postives = 268/353 (75.92%), Query Frame = 1
BLAST of Spo18875.1 vs. TAIR (Arabidopsis)
Match: AT5G08740.1 (NAD(P)H dehydrogenase C1) HSP 1 Score: 68.2 bits (165), Expect = 1.200e-11 Identity = 90/395 (22.78%), Postives = 157/395 (39.75%), Query Frame = 1
BLAST of Spo18875.1 vs. TAIR (Arabidopsis)
Match: AT4G21490.1 (NAD(P)H dehydrogenase B3) HSP 1 Score: 53.1 bits (126), Expect = 4.000e-7 Identity = 46/155 (29.68%), Postives = 70/155 (45.16%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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