Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTTTTAACTCAATAACGATTTCTTACCTTGTTATATCTAGTTAATCTTTCATAACCAGCAAATACCACAATTCTTGTTTCCATATTTAATATGTTCGTTTAATACGGCCATGTTTTCTTATGCATAGCTAATTTTTGTCATAATTTTGACATCCAGTTTAATTTGTGTACATAAATAAAGCAGGACATAATCAACAATTTCACAGTTGGTGGAGGATTTGATCAGCAAGCACTCGCATGGTACCAGGACTTAGCCCCGCAACAACCCTGTCTCTCTGCGACCATTGATTCGCAATCATCCATCTGCGGTATGAATATTAATTAAGAAGCAATTTGTGCACTGCAATATAATTAATGTTGCATATATAGTGACAATGGTGTAATAATGTACTTAAACAAATTCGATCATATTGTGTTTGTATGTATAGCTGGAAGTCCAACCTCAATTCTTATAAAGCCAAAAGCAGGAGATAATCAAGGAAGTGGCTCCTCTGAAGATGATGAAGAAGAGACTGAAGCCGGTCAGTGTGAGCAGAGCGGCGATGATGGTGTTGATGTAAAGCGTATTAGAAGGTACAGAGTACTCCGTACTACTTTATATATTTTGTATTGCTATATATCATGTATATAATGTGCATGTTACTCCGTAATATAGCAAGTTTAACAGATCGCCTGATAATGAAATTATGTATTTCAGGATGGTTTCTAATAGGGAGTCTGCTCGTCGTTCCAGAAGAAGGAAGCAAGCACATCTTCTAGATTTGGAAGTTCAGGTATTACTCTACCTAGTATTGACTTGTTCAGTTGTCATTTCTCAACTTTTGTGGGAAAGAATTGTAATGAAATATGTAGCTGTTATAAAAGTGTATTAATTATAGACACGAGTTCAGAATTTGACAAATGTTGTGTGCTATACAGGTTGAACAACTCGGTGTAGAAAACACTACACTCTTCAAGCAGCTGAACGCAGCAGCTCAGCAGCTCAGAGAAGCCACAACAAACAACCGCGTGCTTAAGTCAGATGTCGAAGCACTCAGAGCCAAGGTATGTACATCAAGGAACTTAAATAAGCTCTTTAATCTTCTTAATCTAACTAGAATTTATTTAAAATATTAAGATGATAAAAATAAAAAATTGCAGGTGAAATTAGCTGAAGACAGGGTTACAAGAGGAACAAGGAACCAGCTTCTTCAGACTAGTACATTACCCCAGATTGCAGCAAGTGTTCAAAGTTTGTCAGGGTTGACAAACATGACACCAACAATCATGGTGCAAGGGCAAGAGGCGTCTTTTGAAGGGGTGTTTTCATGGCAGAACTCAAATGATCATGTGATGCATAGGAGTGGGATAGGGAGTGATTGTACTGTTAGTGGGGGTGTTAGCTGTGTGAGCAGTGTCAATGGTATTTGGCGTTGACTTGAGAGTATCGGATTTGCATGTAAGTACTCCTAGATGGTTTTTGTGTTCTAGGAACAAGGTCTTGGTATAAAAGAGCAAGTTTCAGGGGGGTTGATCGAATAAGTCTTATTGTAAGTCAAGCTAGTTTGTTGCTCATCTTGTAAGTTTTTTTTTTTTCTTGTAATTTTGTTGGTAGCATAAGATGTTTTGAACCAATATATTAATGGTTCACTTGGCTTATTATAAATTGTGAATCAGTTGAACAAGTTGCACATGAAACTAAGTTTTACAATCCCTTATTCTAACAACAATGAGAATACCAAGTATGAAAGAAGAGAATTGGGCCGAAATTCAAGATACTTTGGAGTACTTCAAGCCCGTCACTTATACCATAAAATAATTTGGCCCAATAACTTCTTATTTATGCAAATGCTCCACAGAGTTCTGAATGCCTCATTAGTTTTGGCCCAATAAAGATGAATAGAGGGGTGCAAGTGTGCAACACCAGCTCTTCCACAAGTCCACAAATGACCACAAGTCCCCAATTCAAGCAAGTAATGAAAAATGTATGTGACGCTTCAAATTATCAAGCTACGCCAACAACGTACGTGCTACTAATGTTCGTACATACTTAGGATAAGAGTTGATATGTTTACGGCCCTTCCTATCATTGATAACTTACTCTAAAATTCATTCATCACCTTATTTTTAGGCTTTTTAGCTTACATATTTTTACATTGCAC ATGGATCTTTTTAACTCAATAACGATTTCTTACCTTGACATAATCAACAATTTCACAGTTGGTGGAGGATTTGATCAGCAAGCACTCGCATGGTACCAGGACTTAGCCCCGCAACAACCCTGTCTCTCTGCGACCATTGATTCGCAATCATCCATCTGCGCTGGAAGTCCAACCTCAATTCTTATAAAGCCAAAAGCAGGAGATAATCAAGGAAGTGGCTCCTCTGAAGATGATGAAGAAGAGACTGAAGCCGGTCAGTGTGAGCAGAGCGGCGATGATGGTGTTGATGTAAAGCGTATTAGAAGGATGGTTTCTAATAGGGAGTCTGCTCGTCGTTCCAGAAGAAGGAAGCAAGCACATCTTCTAGATTTGGAAGTTCAGGTTGAACAACTCGGTGTAGAAAACACTACACTCTTCAAGCAGCTGAACGCAGCAGCTCAGCAGCTCAGAGAAGCCACAACAAACAACCGCGTGCTTAAGTCAGATGTCGAAGCACTCAGAGCCAAGGTGAAATTAGCTGAAGACAGGGTTACAAGAGGAACAAGGAACCAGCTTCTTCAGACTAGTACATTACCCCAGATTGCAGCAAGTGTTCAAAGTTTGTCAGGGTTGACAAACATGACACCAACAATCATGGTGCAAGGGCAAGAGGCGTCTTTTGAAGGGGTGTTTTCATGGCAGAACTCAAATGATCATGTGATGCATAGGAGTGGGATAGGGAGTGATTGTACTGTTAGTGGGGGTGTTAGCTGTGTGAGCAGTGTCAATGGTATTTGGCGTTGACTTGAGAGTATCGGATTTGCATGTAAGTACTCCTAGATGGTTTTTGTGTTCTAGGAACAAGGTCTTGGTATAAAAGAGCAAGTTTCAGGGGGGTTGATCGAATAAGTCTTATTGTAAGTCAAGCTAGTTTGTTGCTCATCTTGTAAGTTTTTTTTTTTTCTTGTAATTTTGTTGGTAGCATAAGATGTTTTGAACCAATATATTAATGGTTCACTTGGCTTATTATAAATTGTGAATCAGTTGAACAAGTTGCACATGAAACTAAGTTTTACAATCCCTTATTCTAACAACAATGAGAATACCAAGTATGAAAGAAGAGAATTGGGCCGAAATTCAAGATACTTTGGAGTACTTCAAGCCCGTCACTTATACCATAAAATAATTTGGCCCAATAACTTCTTATTTATGCAAATGCTCCACAGAGTTCTGAATGCCTCATTAGTTTTGGCCCAATAAAGATGAATAGAGGGGTGCAAGTGTGCAACACCAGCTCTTCCACAAGTCCACAAATGACCACAAGTCCCCAATTCAAGCAAGTAATGAAAAATGTATGTGACGCTTCAAATTATCAAGCTACGCCAACAACGTACGTGCTACTAATGTTCGTACATACTTAGGATAAGAGTTGATATGTTTACGGCCCTTCCTATCATTGATAACTTACTCTAAAATTCATTCATCACCTTATTTTTAGGCTTTTTAGCTTACATATTTTTACATTGCAC ATGGATCTTTTTAACTCAATAACGATTTCTTACCTTGACATAATCAACAATTTCACAGTTGGTGGAGGATTTGATCAGCAAGCACTCGCATGGTACCAGGACTTAGCCCCGCAACAACCCTGTCTCTCTGCGACCATTGATTCGCAATCATCCATCTGCGCTGGAAGTCCAACCTCAATTCTTATAAAGCCAAAAGCAGGAGATAATCAAGGAAGTGGCTCCTCTGAAGATGATGAAGAAGAGACTGAAGCCGGTCAGTGTGAGCAGAGCGGCGATGATGGTGTTGATGTAAAGCGTATTAGAAGGATGGTTTCTAATAGGGAGTCTGCTCGTCGTTCCAGAAGAAGGAAGCAAGCACATCTTCTAGATTTGGAAGTTCAGGTTGAACAACTCGGTGTAGAAAACACTACACTCTTCAAGCAGCTGAACGCAGCAGCTCAGCAGCTCAGAGAAGCCACAACAAACAACCGCGTGCTTAAGTCAGATGTCGAAGCACTCAGAGCCAAGGTGAAATTAGCTGAAGACAGGGTTACAAGAGGAACAAGGAACCAGCTTCTTCAGACTAGTACATTACCCCAGATTGCAGCAAGTGTTCAAAGTTTGTCAGGGTTGACAAACATGACACCAACAATCATGGTGCAAGGGCAAGAGGCGTCTTTTGAAGGGGTGTTTTCATGGCAGAACTCAAATGATCATGTGATGCATAGGAGTGGGATAGGGAGTGATTGTACTGTTAGTGGGGGTGTTAGCTGTGTGAGCAGTGTCAATGGTATTTGGCGTTGA MDLFNSITISYLDIINNFTVGGGFDQQALAWYQDLAPQQPCLSATIDSQSSICAGSPTSILIKPKAGDNQGSGSSEDDEEETEAGQCEQSGDDGVDVKRIRRMVSNRESARRSRRRKQAHLLDLEVQVEQLGVENTTLFKQLNAAAQQLREATTNNRVLKSDVEALRAKVKLAEDRVTRGTRNQLLQTSTLPQIAASVQSLSGLTNMTPTIMVQGQEASFEGVFSWQNSNDHVMHRSGIGSDCTVSGGVSCVSSVNGIWR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18467.1 vs. NCBI nr
Match: gi|902233325|gb|KNA22999.1| (hypothetical protein SOVF_028880 isoform B [Spinacia oleracea]) HSP 1 Score: 471.1 bits (1211), Expect = 1.300e-129 Identity = 250/260 (96.15%), Postives = 252/260 (96.92%), Query Frame = 1
BLAST of Spo18467.1 vs. NCBI nr
Match: gi|902233324|gb|KNA22998.1| (hypothetical protein SOVF_028880 isoform A [Spinacia oleracea]) HSP 1 Score: 470.7 bits (1210), Expect = 1.700e-129 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of Spo18467.1 vs. NCBI nr
Match: gi|731317993|ref|XP_010669482.1| (PREDICTED: basic leucine zipper 9 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 338.2 bits (866), Expect = 1.300e-89 Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 1
BLAST of Spo18467.1 vs. NCBI nr
Match: gi|870866845|gb|KMT17764.1| (hypothetical protein BVRB_2g035120 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 338.2 bits (866), Expect = 1.300e-89 Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 1
BLAST of Spo18467.1 vs. NCBI nr
Match: gi|731317995|ref|XP_010669483.1| (PREDICTED: basic leucine zipper 9 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 338.2 bits (866), Expect = 1.300e-89 Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 1
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVQ1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028880 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 8.800e-130 Identity = 250/260 (96.15%), Postives = 252/260 (96.92%), Query Frame = 1
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU60_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028880 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 1.200e-129 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D084_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035120 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 8.900e-90 Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 1
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Match: A0A162BA88_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004549 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.800e-45 Identity = 132/243 (54.32%), Postives = 164/243 (67.49%), Query Frame = 1
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Match: R9WYP9_CAMSI (BZIP transcription factor family protein 12 OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.900e-44 Identity = 130/260 (50.00%), Postives = 166/260 (63.85%), Query Frame = 1
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.900e-33 Identity = 118/245 (48.16%), Postives = 145/245 (59.18%), Query Frame = 1
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2) HSP 1 Score: 104.0 bits (258), Expect = 2.500e-21 Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 1
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.800e-19 Identity = 72/193 (37.31%), Postives = 104/193 (53.89%), Query Frame = 1
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.500e-16 Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 1
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2) HSP 1 Score: 82.8 bits (203), Expect = 6.100e-15 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 1
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Match: AT5G24800.1 (basic leucine zipper 9) HSP 1 Score: 143.7 bits (361), Expect = 1.600e-34 Identity = 118/245 (48.16%), Postives = 145/245 (59.18%), Query Frame = 1
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Match: AT5G28770.2 (bZIP transcription factor family protein) HSP 1 Score: 97.8 bits (242), Expect = 1.000e-20 Identity = 72/193 (37.31%), Postives = 104/193 (53.89%), Query Frame = 1
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Match: AT3G54620.1 (basic leucine zipper 25) HSP 1 Score: 87.4 bits (215), Expect = 1.400e-17 Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 1
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Match: AT4G02640.2 (bZIP transcription factor family protein) HSP 1 Score: 82.8 bits (203), Expect = 3.400e-16 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 1
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Match: AT2G18160.1 (basic leucine-zipper 2) HSP 1 Score: 54.7 bits (130), Expect = 1.000e-7 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18467.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18467.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18467.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18467.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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