Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTGAAGAGGACCTCAAATAGACAACCCCATCAAGCCTTGGCCCTCAAAAAAATCCTTAGAAGATGTTCAAGCTTTGTTGGGGAGAGTGAAGATGAACTTATTCAAGATGTTCCAAAAGGCCATTTTGTTGTTTATGTAGGACAACATCGAATTCGATATATCATTCCTGTAACGTGGTTGGCTCACCCCGAGTTCAAGGCTCTTCTTCGACAAAGTGAAGAAGAGTATGGATTCAAACATGAAATGGGTATCACTATTCCTTGTGATGAACCCTTTTTCCTCTCCGTTGTATCTACTTTAGGGTGA ATGGCTTTGAAGAGGACCTCAAATAGACAACCCCATCAAGCCTTGGCCCTCAAAAAAATCCTTAGAAGATGTTCAAGCTTTGTTGGGGAGAGTGAAGATGAACTTATTCAAGATGTTCCAAAAGGCCATTTTGTTGTTTATGTAGGACAACATCGAATTCGATATATCATTCCTGTAACGTGGTTGGCTCACCCCGAGTTCAAGGCTCTTCTTCGACAAAGTGAAGAAGAGTATGGATTCAAACATGAAATGGGTATCACTATTCCTTGTGATGAACCCTTTTTCCTCTCCGTTGTATCTACTTTAGGGTGA ATGGCTTTGAAGAGGACCTCAAATAGACAACCCCATCAAGCCTTGGCCCTCAAAAAAATCCTTAGAAGATGTTCAAGCTTTGTTGGGGAGAGTGAAGATGAACTTATTCAAGATGTTCCAAAAGGCCATTTTGTTGTTTATGTAGGACAACATCGAATTCGATATATCATTCCTGTAACGTGGTTGGCTCACCCCGAGTTCAAGGCTCTTCTTCGACAAAGTGAAGAAGAGTATGGATTCAAACATGAAATGGGTATCACTATTCCTTGTGATGAACCCTTTTTCCTCTCCGTTGTATCTACTTTAGGGTGA MALKRTSNRQPHQALALKKILRRCSSFVGESEDELIQDVPKGHFVVYVGQHRIRYIIPVTWLAHPEFKALLRQSEEEYGFKHEMGITIPCDEPFFLSVVSTLG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18051.1 vs. NCBI nr
Match: gi|20149050|gb|AAM12780.1| (auxin-induced SAUR-like protein [Capsicum annuum]) HSP 1 Score: 132.9 bits (333), Expect = 3.200e-28 Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Spo18051.1 vs. NCBI nr
Match: gi|970015956|ref|XP_015069064.1| (PREDICTED: auxin-induced protein 15A [Solanum pennellii]) HSP 1 Score: 132.5 bits (332), Expect = 4.200e-28 Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Spo18051.1 vs. NCBI nr
Match: gi|460377518|ref|XP_004234539.1| (PREDICTED: auxin-induced protein 15A [Solanum lycopersicum]) HSP 1 Score: 132.1 bits (331), Expect = 5.500e-28 Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Spo18051.1 vs. NCBI nr
Match: gi|698534882|ref|XP_009764004.1| (PREDICTED: auxin-induced protein 15A-like [Nicotiana sylvestris]) HSP 1 Score: 131.3 bits (329), Expect = 9.400e-28 Identity = 62/100 (62.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of Spo18051.1 vs. NCBI nr
Match: gi|565352895|ref|XP_006343372.1| (PREDICTED: auxin-induced protein 15A-like [Solanum tuberosum]) HSP 1 Score: 130.6 bits (327), Expect = 1.600e-27 Identity = 61/100 (61.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Match: Q8S349_CAPAN (Auxin-induced SAUR-like protein OS=Capsicum annuum GN=upa4 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.300e-28 Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Match: K4BFN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.800e-28 Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Match: M1C279_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022588 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.100e-27 Identity = 61/100 (61.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Match: A0A0V0GWP5_SOLCH (Putative auxin-induced protein X10A-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.500e-27 Identity = 61/100 (61.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Match: A0A068VL54_COFCA (Uncharacterized protein (Fragment) OS=Coffea canephora GN=GSCOC_T00004253001 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 9.500e-27 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.700e-14 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.700e-14 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.000e-13 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 1
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.000e-13 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 1
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.500e-13 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 125.2 bits (313), Expect = 2.400e-29 Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 1
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 122.5 bits (306), Expect = 1.500e-28 Identity = 55/101 (54.46%), Postives = 78/101 (77.23%), Query Frame = 1
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 118.2 bits (295), Expect = 2.900e-27 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 2.700e-25 Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 1
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.5 bits (275), Expect = 6.100e-25 Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18051.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18051.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18051.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18051.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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