Spo17993 (gene)

Overview
NameSpo17993
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMeiotic asynaptic mutant protein
LocationSuper_scaffold_101 : 183348 .. 186687 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCGTATGTGTCGACGAAGGTTCAGTTAGCAGATATCGTCACTAAAGCGTTGGGGAAGAAGCAATTTGAGTTTTTTTTTGAATAAGATGGGCATTCGAGATCTTCATGCTCCACCTTGAGGGGGATGTTAAGATAGAATATAGGAGATAATATATTGTGAATATTCTGTAGAGTCCTAAATATGGTATGTTACCTAATATGAGTCCTACATATGGTATGTTACCTAATATGTAATCTAGGGTTTAGGTAATGATTTGTACTATATATATACGTGTGTTATTAATGAGAAGGATACGAGATTACACAATATTTGACATGGTATCAAGAGCTTAGGGAGATCCTACGACCCGTCTAAAAAAAAAAAAAATTATCCCCTGCCGGTGGGTTAGAAAAATAAATCCACCGGCGGGATTCGTAATTAATATAATAATTCCGCTGCAAATTGGTAGAAGATGAGGTTTGTGTTGGAGAAAAGACTCGTACTTGGAATCGCGTCCAATTCGAGTATTCATATTGAGATAATTGGTGAGTTCGAAAAGAAAGGCGTTCTCATCAAGAGAAAAAAAAAAAAGTGCAGGTTCGAAAAGAATGGCGTTCTTGCTCGATTTTTTTTAATCGAAGAATGGTGATTCCAATCGCAACGTTCGTGAAACTGCCGTTACGATTGAGGGAGGGAGTTAAGGATAACGTAGTTATCCTAGAGGATAGAATATCATATGAGATAGAGTTATGTTATATGATACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCGTATGTGTCGACGAAGGTTCAGTTAGCAGATATCGTCACTAAAGCGTTGGGGAAGAAGCAATTTGAAGTTTTTTTTGAATAAGATGGGCATTCGAGATCTTCATGCTCCACCTTGAGGGGGATGTTAAGATAGAATATAGGAGATAATATATTGTGAATATTCTGTAGAGTCCTAAATATGGTATGTTACCTAATATGAGTCCTACATATGGTATGTTACCTAATATGTAATCTAGGGTTTAGGTAATGATTTGTACTATATATATACGTGTGTTATTAATGAGAAGGAGACGAGATTACACAATATTTGACAGTATCTGTTATTCTATTATCAGAGATGAAGATAAAGAAGCTGATGCCAATGGATCATGAGTCTCGTAGACTGATAGATTGGATGGAGGAAGGCGAGTACACTTTTAAAATGTTTTTGACATACCACTTGTTTGGTTTTATTGGTACTTGCTAATGTAGCTGAGAAACTTGGTTTTTCTGTCCTTTGGCAGGTGTATATGATGCATTGCAGAATAAGTATCTAAAGACACTGTTGTTCAGCATATGTGATGCAATAGATGGGCAGGCAATCGAGGAATATACATGTAAGGTTCTTATGCGTGCAAAAGTTAAAAAGAAACACTGTTGGATTTCAACGAGTCAATCAAAGTCAATGAGTCAATTAGAGAGACTTTGTCATTATAATGCAGTTCATAAGCATGCGTAAATATGACATACTCCTTCTTATTCCCTTATCTTCTTGTATGCAAGTCTTTTTTTTTATTGTGATGGTAACTCAATAATACCCAACTGTAATGCATAGCTGAATAATCTCAAATTTTGTATATACAACTTGCATTTTCTTTTAGCTATCCAAATGCTTAGAGCCAGGAAGTCTACATGAATTTCAATTGCTCTGGTAACAAAAAGACGGGCGTAATTTAAGTGCAATTCTACTGATTAGGTTGCTTCAAATCAAATGAAGTAAAGTTATAGTGTAAAGGTATAAAGGTTGCTTCATATCAATTCTACTGATTAGGTTGCTTCTTGGAATAGTATAAAGGTATAAAAAGAGACTAGTAAATGATTATTTTCTGTTGTGACCATTTCAGCTTTTTGATCAATTTCTCTCAATATTGTAATTGTATGCTTTGGAAAACTATACATCACAACATGCTTGAGGATAGGAGCATTTATATTGGACCTATCTACTTTACAATTGTTCTGAATTTATTCAATGGTGCAGTGAGGCCTCCAAATACAGTTTTCTGGTGTAGCTACGCAACCTGCACAAGGTGTTGCCTTTCATGGATTTCCTGGAGGAGCTCTTCAATTGGGCTCAAACATGCTTATTTCGAGAGCAACAACAAATAGCGTAGGGGCTGTTGTGAACACAGAAAGGTCACCAACAAGAGTCTTCTCAGACAGAGGTAATAGTCTTTTGACAAACCATTCTGGGTTTCTATCGACTCTATAACCTGCAGCTTGTTTACCACCTAAGCCATCTGTAACAGCAGGGGGTTCTTCCACACAACCTACACCATCCAAAAATGATTCCTTCTGGAAGCCTACAAGTCCCTTCAGTCGAGGTTCTATTATCTGATTTCTTCATACGCGTTGCCAGGTATCTGCCAAGGAACAAACGGAAGATGAAATATGGTGTCAAGAGTGAACGTTTTCACATTTCAGATTAATGTAACCCGATTTCTTACCTACGCTTTTTAGTATGGCTAATTAATATTTCTTGGGGGACCGTGCGCGCTAGAGCACGGGCGAACAACTAGTTTTTATAAAAAGTACCAATGATGTCTTGGCCTAGTAGTTAAGACTGAGGGCATGTGTACCATAGGTCTCAGGTTCGAATCCCCCCACCCCCATTTGTAATTTATATTGCCCTTATAGAAATAGGTAAAAAATATATAGAAATAGGTCTACAACCGGTACGTGCGGGCTTTAGACCGATTTTTCCGGTTCAGTCCAAGCATAATTGGTCCAGTTTTTGGATCTTGAATTATCAAAATTTTGGTCGATCCTGTCCGGATTTAGAGCGATGAACACCCACC

mRNA sequence

ATGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCGTATGTGTCGACGAAGAGTTATGTTATATGATACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCAGATGAAGATAAAGAAGCTGATGCCAATGGATCATGAGTCTCGTAGACTGATAGATTGGATGGAGGAAGGTGTATATGATGCATTGCAGAATAAGTATCTAAAGACACTGTTGTTCAGCATATGTGATGCAATAGATGGGCAGGCAATCGAGGAATATACATCTACGCAACCTGCACAAGGTGTTGCCTTTCATGGATTTCCTGGAGGAGCTCTTCAATTGGGCTCAAACATGCTTATTTCGAGAGCAACAACAAATAGCGTAGGGGCTGTTGTGAACACAGAAAGGTCACCAACAAGAGTCTTCTCAGACAGAGCAGGGGGTTCTTCCACACAACCTACACCATCCAAAAATGATTCCTTCTGGAAGCCTACAAGTCCCTTCAGTCGAGGTTCTATTATCTGATTTCTTCATACGCGTTGCCAGGTATCTGCCAAGGAACAAACGGAAGATGAAATATGGTGTCAAGAGTGAACGTTTTCACATTTCAGATTAATGTAACCCGATTTCTTACCTACGCTTTTTAGTATGGCTAATTAATATTTCTTGGGGGACCGTGCGCGCTAGAGCACGGGCGAACAACTAGTTTTTATAAAAAGTACCAATGATGTCTTGGCCTAGTAGTTAAGACTGAGGGCATGTGTACCATAGGTCTCAGGTTCGAATCCCCCCACCCCCATTTGTAATTTATATTGCCCTTATAGAAATAGGTAAAAAATATATAGAAATAGGTCTACAACCGGTACGTGCGGGCTTTAGACCGATTTTTCCGGTTCAGTCCAAGCATAATTGGTCCAGTTTTTGGATCTTGAATTATCAAAATTTTGGTCGATCCTGTCCGGATTTAGAGCGATGAACACCCACC

Coding sequence (CDS)

ATGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCGTATGTGTCGACGAAGAGTTATGTTATATGATACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAACATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCAGATGAAGATAAAGAAGCTGATGCCAATGGATCATGAGTCTCGTAGACTGATAGATTGGATGGAGGAAGGTGTATATGATGCATTGCAGAATAAGTATCTAAAGACACTGTTGTTCAGCATATGTGATGCAATAGATGGGCAGGCAATCGAGGAATATACATCTACGCAACCTGCACAAGGTGTTGCCTTTCATGGATTTCCTGGAGGAGCTCTTCAATTGGGCTCAAACATGCTTATTTCGAGAGCAACAACAAATAGCGTAGGGGCTGTTGTGAACACAGAAAGGTCACCAACAAGAGTCTTCTCAGACAGAGCAGGGGGTTCTTCCACACAACCTACACCATCCAAAAATGATTCCTTCTGGAAGCCTACAAGTCCCTTCAGTCGAGGTTCTATTATCTGA

Protein sequence

MGDTEGVSSPTGDTEGVSSPTGDTEGVLSHTGDNEDVSLTSGVDEGVSSPVREEQQHYTPSRVESDVVSATTGVDETTCSDESETRQSSARRMCRRRVMLYDTGDTEGVSSPTGDTEGVSSPTGDTEGVLSHTGDNEDVSLTSGVDEGVSSPVREEQQHYTPSRVESDVVSATTGVDETTCSDESETRQSSARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEYTSTQPAQGVAFHGFPGGALQLGSNMLISRATTNSVGAVVNTERSPTRVFSDRAGGSSTQPTPSKNDSFWKPTSPFSRGSII
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17993.1Spo17993.1mRNA


Homology
[Close]
BLAST of Spo17993.1 vs. NCBI nr
Match: gi|902222175|gb|KNA19113.1| (hypothetical protein SOVF_064250 [Spinacia oleracea])

HSP 1 Score: 100.1 bits (248), Expect = 7.400e-18
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQNKYLKTLLFSIC+A+DG  IEEY
Sbjct: 51  ALEMKIKKLMPMDPESRRLIDWMEKGVYDALQNKYLKTLLFSICEAVDGPVIEEY 105
[Close]
BLAST of Spo17993.1 vs. NCBI nr
Match: gi|565371183|ref|XP_006352189.1| (PREDICTED: HORMA domain-containing protein 1 [Solanum tuberosum])

HSP 1 Score: 97.8 bits (242), Expect = 3.700e-17
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQNKYLKTLLF +C+AIDG  IEEY
Sbjct: 51  ALEMKIKKLMPMDAESRRLIDWMEKGVYDALQNKYLKTLLFCVCEAIDGPMIEEY 105
[Close]
BLAST of Spo17993.1 vs. NCBI nr
Match: gi|1009176563|ref|XP_015869498.1| (PREDICTED: uncharacterized protein LOC107406807 [Ziziphus jujuba])

HSP 1 Score: 97.4 bits (241), Expect = 4.800e-17
Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQNKYLKTLLF +C+A+DG  IEEY
Sbjct: 51  ALEMKIKKLMPMDAESRRLIDWMEKGVYDALQNKYLKTLLFCVCEAVDGPMIEEY 105
[Close]
BLAST of Spo17993.1 vs. NCBI nr
Match: gi|719985286|ref|XP_010251335.1| (PREDICTED: HORMA domain-containing protein 1 [Nelumbo nucifera])

HSP 1 Score: 96.7 bits (239), Expect = 8.200e-17
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMDHESRRLIDWME+GVYDALQ KYLKTLLF IC+ I+G  IEEY
Sbjct: 51  ALEMKIKKLMPMDHESRRLIDWMEKGVYDALQKKYLKTLLFCICETIEGPMIEEY 105
[Close]
BLAST of Spo17993.1 vs. NCBI nr
Match: gi|470149090|ref|XP_004310076.1| (PREDICTED: HORMA domain-containing protein 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16
Identity = 44/56 (78.57%), Postives = 50/56 (89.29%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEYT 248
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQ KYLKTLLF +C+A++G  IEEYT
Sbjct: 51  ALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVEGPMIEEYT 106
[Close]
BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI01_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064250 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.100e-18
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQNKYLKTLLFSIC+A+DG  IEEY
Sbjct: 51  ALEMKIKKLMPMDPESRRLIDWMEKGVYDALQNKYLKTLLFSICEAVDGPVIEEY 105
[Close]
BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Match: M1CU93_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029108 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.700e-17
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1 

		  

Query: 195 MKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           MKIKKLMPMD ESRRLIDWME+GVYDALQNKYLKTLLF +C+AIDG  IEEY
Sbjct: 1   MKIKKLMPMDAESRRLIDWMEKGVYDALQNKYLKTLLFCVCEAIDGPMIEEY 52
[Close]
BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5Z6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150910 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.300e-16
Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMP+D ESRRLIDWME+GVYDALQ KYL+TLLFSIC+A+DG  IEEY
Sbjct: 51  ALEMKIKKLMPLDAESRRLIDWMEKGVYDALQKKYLRTLLFSICEAVDGPVIEEY 105
[Close]
BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Match: K4BNP0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.700e-16
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A +MKIKKLMPMD ESRRLIDWME+GVYDALQ KYLKTLLF +C+A+DG  IEEY
Sbjct: 51  ALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEY 105
[Close]
BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Match: Q9M6R5_ARATH (Meiotic asynaptic mutant 1 OS=Arabidopsis thaliana GN=ASY1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.700e-16
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEYT 248
           A  MKIKKLMPMD ESRRLIDWME+GVYDALQ KYLKTL+FSIC+ +DG  IEEY+
Sbjct: 51  ALDMKIKKLMPMDAESRRLIDWMEKGVYDALQRKYLKTLMFSICETVDGPMIEEYS 106
[Close]
BLAST of Spo17993.1 vs. TAIR (Arabidopsis)
Match: AT1G67370.1 (DNA-binding HORMA family protein)

HSP 1 Score: 95.1 bits (235), Expect = 8.400e-20
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEYT 248
           A  MKIKKLMPMD ESRRLIDWME+GVYDALQ KYLKTL+FSIC+ +DG  IEEY+
Sbjct: 51  ALDMKIKKLMPMDAESRRLIDWMEKGVYDALQRKYLKTLMFSICETVDGPMIEEYS 106
[Close]
BLAST of Spo17993.1 vs. TAIR (Arabidopsis)
Match: AT4G32200.1 (DNA-binding HORMA family protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.600e-15
Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 1 

		  

Query: 192 ARQMKIKKLMPMDHESRRLIDWMEEGVYDALQNKYLKTLLFSICDAIDGQAIEEY 247
           A  +K+KKLMPMD ESRRLI WME+GVYDAL  K+LK L+F IC+ +DG  IEEY
Sbjct: 46  ALDLKMKKLMPMDAESRRLIGWMEKGVYDALHKKHLKKLIFYICETVDGPLIEEY 100
The following BLAST results are available for this feature:
BLAST of Spo17993.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222175|gb|KNA19113.1|7.4e-1885.4hypothetical protein SOVF_0642... [more]
gi|565371183|ref|XP_006352189.1|3.7e-1783.6PREDICTED: HORMA domain-contai... [more]
gi|1009176563|ref|XP_015869498.1|4.8e-1781.8PREDICTED: uncharacterized pro... [more]
gi|719985286|ref|XP_010251335.1|8.2e-1781.8PREDICTED: HORMA domain-contai... [more]
gi|470149090|ref|XP_004310076.1|1.4e-1678.5PREDICTED: HORMA domain-contai... [more]
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BLAST of Spo17993.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RI01_SPIOL5.1e-1885.4Uncharacterized protein OS=Spi... [more]
M1CU93_SOLTU5.7e-1786.5Uncharacterized protein OS=Sol... [more]
A0A0J8C5Z6_BETVU1.3e-1680.0Uncharacterized protein OS=Bet... [more]
K4BNP0_SOLLC1.7e-1680.0Uncharacterized protein OS=Sol... [more]
Q9M6R5_ARATH1.7e-1678.5Meiotic asynaptic mutant 1 OS=... [more]
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BLAST of Spo17993.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17993.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G67370.18.4e-2078.5DNA-binding HORMA family prote... [more]
AT4G32200.11.6e-1567.2DNA-binding HORMA family prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 193..247
score: 1.0
IPR003511HORMA domainunknownSSF56019The spindle assembly checkpoint protein mad2coord: 194..247
score: 1.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo256380.95Barchart | Table
Spo197230.88Barchart | Table
Spo039390.83Barchart | Table