Spo17926 (gene)

Overview
NameSpo17926
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)
Locationchr2 : 19182520 .. 19183272 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGGCTGAGTCGATGACCTACGTATAAAATAAGAAACATTTTTGGATTTGAATAAAAAAAAACAACTTTGCTGACAATTACTTATATATTTTTTTTTTGTTTGGGTCAGAAGAGTTCTCCGAATATTCTAATCTTGATTAGTGATGGGTTTCCATTTTTTGTTGACTATGAACAGAGAAGAGAGGATAAGTTCATTACATTCAAAAAAGATATGGAAATTTGCCATAAAAAATTGAAGTAATTGAGCGTGAGTGCCAAATGAATTGAAAAATTCACGTTTGGTTCGGGAAGGGATCATGAATGTTTTGAAATGAATGGAAAGATAATCTACTTTCATTAAGTGATTTATTAGATAATTGAAAACAGAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

mRNA sequence

ATGGCAAAGGCTGAGTCGATGACCTACAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

Coding sequence (CDS)

ATGGCAAAGGCTGAGTCGATGACCTACAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

Protein sequence

MAKAESMTYRILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTLEQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGAMNEITD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17926.1Spo17926.1mRNA


Homology
[Close]
BLAST of Spo17926.1 vs. NCBI nr
Match: gi|11497510|ref|NP_054918.1| (ATP synthase CF0 B subunit [Spinacia oleracea])

HSP 1 Score: 230.3 bits (586), Expect = 2.000e-57
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQFENYKNETIQFEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. NCBI nr
Match: gi|836613816|ref|YP_009143625.1| (ATP synthase CF0 B subunit (chloroplast) [Salicornia brachiata])

HSP 1 Score: 222.6 bits (566), Expect = 4.100e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. NCBI nr
Match: gi|932252319|gb|ALG63275.1| (ATP synthase CF0 B subunit (chloroplast) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 60  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 119

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 120 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 179

Query: 130 MNEITD 136
           MNEITD
Sbjct: 180 MNEITD 185
[Close]
BLAST of Spo17926.1 vs. NCBI nr
Match: gi|628819094|gb|AHY80527.1| (ATP synthase CF0 subunit I (plastid) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. NCBI nr
Match: gi|1020267070|gb|AMZ03421.1| (ATP synthase subunit b (chloroplast) [Bienertia sinuspersici])

HSP 1 Score: 221.5 bits (563), Expect = 9.100e-55
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFR+NGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRINGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V Q+VFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQQVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QX53_9CARY (ATP synthase subunit b, chloroplastic OS=Salicornia brachiata GN=atpF PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXT4_SALEU (ATP synthase subunit b, chloroplastic OS=Salicornia europaea GN=atpF PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0N9LT81_BETVU (ATP synthase subunit b, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=atpF PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.800e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 60  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 119

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 120 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 179

Query: 130 MNEITD 136
           MNEITD
Sbjct: 180 MNEITD 185
[Close]
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A023ZR79_BETVU (ATP synthase CF0 subunit I OS=Beta vulgaris subsp. vulgaris GN=atpF PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.800e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A159ZR88_9CARY (ATP synthase subunit b OS=Bienertia sinuspersici GN=atpF PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.300e-55
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFR+NGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRINGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V Q+VFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQQVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_SPIOL (ATP synthase subunit b, chloroplastic OS=Spinacia oleracea GN=atpF PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.200e-59
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQFENYKNETIQFEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184
[Close]
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_EUCGG (ATP synthase subunit b, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpF PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.700e-54
Identity = 112/126 (88.89%), Postives = 119/126 (94.44%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVEM+A+QFRVNGYSEIE+EK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEMEAEQFRVNGYSEIEQEKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCLNNELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184
[Close]
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_CARPA (ATP synthase subunit b, chloroplastic OS=Carica papaya GN=atpF PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.900e-53
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVEM+A+QFRVNGYSEIEREK NLINST KTL
Sbjct: 59  RILNTIRNSEELRDGAIEQLEKARARLRKVEMEAEQFRVNGYSEIEREKWNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETIQFEQQ+AINQV QRVFQQALQGA+GTLNSCL+NELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETIQFEQQRAINQVRQRVFQQALQGAIGTLNSCLSNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184
[Close]
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_POPTR (ATP synthase subunit b, chloroplastic OS=Populus trichocarpa GN=atpF PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.000e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVE++ADQFRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCL NELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EIT+
Sbjct: 179 MKEITN 184
[Close]
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_POPAL (ATP synthase subunit b, chloroplastic OS=Populus alba GN=atpF PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.000e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVE++ADQFRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCL NELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EIT+
Sbjct: 179 MKEITN 184
[Close]
BLAST of Spo17926.1 vs. TAIR (Arabidopsis)
Match: ATCG00130.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast)

HSP 1 Score: 198.7 bits (504), Expect = 2.200e-51
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 1 

		  

Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AI+QLE ARARL+ VE +AD+FRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELREGAIQQLENARARLRNVETEADKFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           +Q ENYKNETI FEQQ+ INQV +RVFQQALQGA+GTLNSCL+NELHLRTINANIGMFG 
Sbjct: 119 KQLENYKNETILFEQQRTINQVRERVFQQALQGAIGTLNSCLSNELHLRTINANIGMFGT 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184
The following BLAST results are available for this feature:
BLAST of Spo17926.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497510|ref|NP_054918.1|2.0e-5797.6ATP synthase CF0 B subunit [Sp... [more]
gi|836613816|ref|YP_009143625.1|4.1e-5593.6ATP synthase CF0 B subunit (ch... [more]
gi|932252319|gb|ALG63275.1|6.9e-5595.2ATP synthase CF0 B subunit (ch... [more]
gi|628819094|gb|AHY80527.1|6.9e-5595.2ATP synthase CF0 subunit I (pl... [more]
gi|1020267070|gb|AMZ03421.1|9.1e-5592.8ATP synthase subunit b (chloro... [more]
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BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0G2QX53_9CARY2.8e-5593.6ATP synthase subunit b, chloro... [more]
A0A0G2QXT4_SALEU2.8e-5593.6ATP synthase subunit b, chloro... [more]
A0A0N9LT81_BETVU4.8e-5595.2ATP synthase subunit b, chloro... [more]
A0A023ZR79_BETVU4.8e-5595.2ATP synthase CF0 subunit I OS=... [more]
A0A159ZR88_9CARY6.3e-5592.8ATP synthase subunit b OS=Bien... [more]
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BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATPF_SPIOL1.2e-5997.6ATP synthase subunit b, chloro... [more]
ATPF_EUCGG7.7e-5488.8ATP synthase subunit b, chloro... [more]
ATPF_CARPA2.9e-5388.8ATP synthase subunit b, chloro... [more]
ATPF_POPTR5.0e-5388.1ATP synthase subunit b, chloro... [more]
ATPF_POPAL5.0e-5388.1ATP synthase subunit b, chloro... [more]
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BLAST of Spo17926.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
ATCG00130.12.2e-5182.5ATPase, F0 complex, subunit B/... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002146ATPase, F0 complex, subunit B/B', bacterial/chloroplastPFAMPF00430ATP-synt_Bcoord: 10..107
score: 2.3
NoneNo IPR availableunknownCoilCoilcoord: 11..49
scor
NoneNo IPR availablePANTHERPTHR34264FAMILY NOT NAMEDcoord: 10..134
score: 1.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0010089 xylem development
biological_process GO:0009719 response to endogenous stimulus
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0010033 response to organic substance
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0007033 vacuole organization
biological_process GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process
biological_process GO:0006370 7-methylguanosine mRNA capping
biological_process GO:0006266 DNA ligation
biological_process GO:0006260 DNA replication
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0098507 polynucleotide 5' dephosphorylation
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0009733 response to auxin
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0033044 regulation of chromosome organization
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0010014 meristem initiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0048527 lateral root development
biological_process GO:0032502 developmental process
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006397 mRNA processing
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0065007 biological regulation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009987 cellular process
biological_process GO:0009845 seed germination
biological_process GO:0018342 protein prenylation
biological_process GO:0018345 protein palmitoylation
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0016311 dephosphorylation
biological_process GO:0006308 DNA catabolic process
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0043412 macromolecule modification
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0015976 carbon utilization
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0006730 one-carbon metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0048439 flower morphogenesis
biological_process GO:0048449 floral organ formation
biological_process GO:0006897 endocytosis
biological_process GO:0001510 RNA methylation
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0048589 developmental growth
biological_process GO:0006312 mitotic recombination
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0046339 diacylglycerol metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
biological_process GO:0006396 RNA processing
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0006281 DNA repair
biological_process GO:0006310 DNA recombination
biological_process GO:0030261 chromosome condensation
biological_process GO:0051301 cell division
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0043090 amino acid import
biological_process GO:0009640 photomorphogenesis
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0071555 cell wall organization
biological_process GO:0016049 cell growth
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0007018 microtubule-based movement
biological_process GO:0007020 microtubule nucleation
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006857 oligopeptide transport
biological_process GO:0009407 toxin catabolic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009735 response to cytokinin
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051302 regulation of cell division
biological_process GO:0051604 protein maturation
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0000338 protein deneddylation
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005576 extracellular region
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005874 microtubule
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045298 tubulin complex
cellular_component GO:0031361 integral component of thylakoid membrane
cellular_component GO:0055029 nuclear DNA-directed RNA polymerase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0016459 myosin complex
cellular_component GO:0030140 trans-Golgi network transport vesicle
cellular_component GO:0000502 proteasome complex
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0008278 cohesin complex
cellular_component GO:0005829 cytosol
cellular_component GO:0000785 chromatin
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000151 ubiquitin ligase complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0005730 nucleolus
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0005488 binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0008289 lipid binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0004651 polynucleotide 5'-phosphatase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0070696 transmembrane receptor protein serine/threonine kinase binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0052826 inositol hexakisphosphate 2-phosphatase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0042578 phosphoric ester hydrolase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0003774 motor activity
molecular_function GO:0003910 DNA ligase (ATP) activity
molecular_function GO:0004484 mRNA guanylyltransferase activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0003881 CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity
molecular_function GO:0004650 polygalacturonase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo076940.75Barchart | Table
Spo168950.74Barchart | Table
Spo250130.74Barchart | Table
Spo208520.73Barchart | Table
Spo111900.72Barchart | Table
Spo175890.72Barchart | Table
Spo071990.72Barchart | Table
Spo105500.71Barchart | Table
Spo229700.71Barchart | Table
Spo007830.71Barchart | Table
Spo234340.71Barchart | Table
Spo176770.71Barchart | Table
Spo047510.70Barchart | Table
Spo224390.70Barchart | Table
Spo105510.70Barchart | Table
Spo148650.70Barchart | Table
Spo036220.70Barchart | Table
Spo037350.70Barchart | Table
Spo202150.70Barchart | Table
Spo228590.70Barchart | Table
Spo196650.69Barchart | Table
Spo242320.69Barchart | Table
Spo237330.69Barchart | Table
Spo139760.69Barchart | Table
Spo224580.69Barchart | Table
Spo074150.69Barchart | Table
Spo248610.69Barchart | Table
Spo244680.69Barchart | Table
Spo098420.69Barchart | Table
Spo173860.69Barchart | Table
Spo091110.68Barchart | Table
Spo030020.68Barchart | Table
Spo158740.68Barchart | Table
Spo164210.68Barchart | Table
Spo084080.68Barchart | Table
Spo181790.68Barchart | Table
Spo171900.68Barchart | Table
Spo255040.68Barchart | Table
Spo176180.68Barchart | Table
Spo002990.68Barchart | Table
Spo051920.68Barchart | Table
Spo069620.68Barchart | Table
Spo047030.68Barchart | Table
Spo042810.68Barchart | Table
Spo001730.67Barchart | Table
Spo010480.67Barchart | Table
Spo012160.67Barchart | Table
Spo017510.67Barchart | Table
Spo050860.67Barchart | Table
Spo059480.67Barchart | Table
Spo074410.67Barchart | Table
Spo088070.67Barchart | Table
Spo099580.67Barchart | Table
Spo105630.67Barchart | Table
Spo107930.67Barchart | Table
Spo109660.67Barchart | Table
Spo116800.67Barchart | Table
Spo119190.67Barchart | Table
Spo171230.67Barchart | Table
Spo177390.67Barchart | Table
Spo215580.67Barchart | Table
Spo216280.67Barchart | Table
Spo226590.67Barchart | Table
Spo257070.67Barchart | Table
Spo300270.67Barchart | Table
Spo085110.66Barchart | Table
Spo251360.66Barchart | Table
Spo171540.66Barchart | Table
Spo119930.66Barchart | Table
Spo100830.66Barchart | Table
Spo092600.66Barchart | Table
Spo089630.66Barchart | Table
Spo219670.66Barchart | Table
Spo060410.66Barchart | Table
Spo259360.66Barchart | Table
Spo049730.66Barchart | Table
Spo233550.66Barchart | Table
Spo020130.66Barchart | Table
Spo016630.66Barchart | Table
Spo238330.66Barchart | Table
Spo247060.66Barchart | Table
Spo011460.66Barchart | Table
Spo146610.66Barchart | Table
Spo145570.66Barchart | Table
Spo135140.66Barchart | Table
Spo166870.66Barchart | Table
Spo167590.66Barchart | Table
Spo070790.66Barchart | Table
Spo206930.66Barchart | Table
Spo214390.66Barchart | Table
Spo003890.66Barchart | Table
Spo267060.66Barchart | Table
Spo087990.65Barchart | Table
Spo253020.65Barchart | Table
Spo179400.65Barchart | Table
Spo127490.65Barchart | Table
Spo083550.65Barchart | Table
Spo197550.65Barchart | Table
Spo015900.65Barchart | Table
Spo011800.65Barchart | Table
Spo063580.65Barchart | Table
Spo038650.65Barchart | Table
Spo246540.65Barchart | Table
Spo167320.65Barchart | Table
Spo158420.65Barchart | Table
Spo003970.65Barchart | Table
Spo053850.65Barchart | Table