Spo17852 (gene)

Overview
NameSpo17852
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 54869120 .. 54873845 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTGAAACTTGGAAGAAATTCGAGTGATATAACAATTTGGAAGAAGATGAAAGTGGTTAAAAATGGAGAAACTAGAGAGCCTAGCTGGTAACACAAGTAACAAGTGAAAATCTTTCTCTCTCCTTCTCAATCCATCTAGCCAGTCACTCCCACTTTCTCTCTCCTTCTAAACCCATTTTATGCAAATTTTAGCCTCTCACTTTCTCTCTCCTTCTAAACCCATCTTATTCAAACTTTAGCCTCACACTTTCTCCTCTATACCTTTACATAAATTTTGTTAGGGCGGTGATAAGCGTCGCAAGTTAATCTTATTTACAATGGGTGTACAATAAATATTGTACATCGGAGTAAAAGTTAACTCAAAATGCTTAAAAGTTAAGCATATATATGTAAAAGTTATCTATTTAATAGTGATAAATTTTTTCATTTTAGTAAAACTTATTTATTCAAAATAACTAATATTGTATAAAATTAATCATTTAACCCTTTAAAATGTTTATCTATCAAATTTTTTTACTAATATAAAAGTTAATCAAAACTAGATTAAAGTTACAAAAAGAATGGTTAAAGTTATCTTGGTGTACAATATATTTGTTGTACACCTTGTGCGCACAAGACCTTTTGTAACAATATTTAGTTGTCGTAATTCCACGTACCAGATTTTAAACGGTACATACGAGTGCCACGTAGGTCATGCGTCGTCAAAATAGTTTTACTATCAAAATAATACTTTTACTATCAAAGTAATATTTAGTAGTCGATAGAAAAAACAAATATTTTATATACAAATCATAAATATTTTTTGAAATAAAAATTATATTATTCAATTTATAAATTAGAATATTAAGATTTTCCTAACTTTATTGTAACATATACGAAATATAATTTCGGGGTTAGAGTAATTGGAGTACTTGAGGTAAAACATAACGAACTAATACCGAACCGCTGAACAAGCCAATGCCATTAAGGCTCCGTTTGGTAAGGCGTAAAACGTTTTCATTGTAAAATGATTTTCCACGGAAAACAGTTTCAAGGGAAAACACAATTCCAAACTAGTTTTCCTTTGTTTGGTAACTTAAAGGAAAATGGGAGAAGGTGGTGAAGATTGAGGGGAAGAAAAGAGAGGGAGGTAAGAAGGAAAGAAGGAAAAGTGGTTTCCCTCCCTTTCAAATGGAAAAGGGTTTTCCATATTTGAGAGAGTAATGGAAAATTGTTTTCCATCCTTTACCCAACCAAACAACGTAAAATGATTGAAAAGGGGAAAATTGTTTCCATGAAAACGTTTTACGCCCTACCAAACGGAGCCTAAGTATTTACGGAAAATTGTGGAGCACTCATTCTATACACCTACTACAGTTGTATAGCGCGTGTACTCCTTGACCTTTTTCGTCACATTTAGGCCCTGTTTGGCAATTGGCTGTTGGCTGTTGGCGGCTGTCGGCTGTTTTACTTGGCTGGTTTGACTGGCTGTTCAAGTTGGCTGCTTTTGTTGGCTGTTTGACTATGGATTGGTTACAAATATGTTTGGTAAAATCAGTTGTTGGCTGTTGGCTGTAGCTATGTAAAATGACATTTAAGGACATTTAATGTCTTTTATTCATTTTTCAATACATACTGTGTATTGTGTACGGAGTAAAACGTAATTACAAATAAATAAATATAAATTAAAAATAAATTACTTTATGCAATAGTATTAATAAATTATTATTTTAATTAATAATTACGGAGTAATAATTAATAACTAATAATAAATAATCAATAATTAATAATTAATAATTAATAATTAATGATTAATTATTAATTAATTATTCACTTTTAGTTATTAGTCATTAATTAATACTCCGTAATTATTAACTTTTAATTATTAATTATTAATTATTAATTATTAACTATTACTCCCTCCATTCCTTTTTGTTGTACCCATAAGGAATGTTGGGGGTTTTTTAAGAAAACTGAAAATTATTAANTTATTAATTATTAATTATTAATTATTGATTATTGATTATTGATTATTGATTATTGATTATTGATTATTGATTATTAATTATTGATTATTAATTATTAATTATTAATTATTGATTATTAATTATTAATTATTAATTATTAGTTAATTAGTAAAAAACAAGGACAAAAAAGTAATTTAGATAGTGAAAAGCCAAAAGCCAACTCCAAAAAGCTAGTGTTACTAGCTTTTCATTTTTGGCGGAAAAGCTGGCTTTTCAGCAAGCTAAAAAGCCAGTTACCAAACATATTTTTTGGCTGTTTGACCAGATTAAAAAGCAGCCAAAAGCCAACCAAAAAGCCAGCAAAAAGCCATTTGCCAAACAAGGCCATAATCTTCTCACAATGCTTTGTAGTTCGCTTGGTGGGGAAATTAGTATAACATTTTGATTCATTNTAATCTTCTCACAATGCTTTGTAGTTCGCTTGGTGGGGAAATTAGTATAACATTTTGATTCATTGAATTTCATTCATAACTAAAACAAATAGAAAGCATAACATGGTGTTTTACATTCAGTTATGCTATAATGCATCATTTTGTATTAATTGTCCCCTTCTTTTCTCTGCCAACCTAGGTGTACGGATGTCATTCATTCCCTTGAGAGAGTAGGAGGTTCTTTTCTAAAGCAGTCAGTCTATAAGGTTTGTGCTCTTCTTGGAGTCAACTCCCTCAATTTTATTTTAGTTTGGATGTTTAAGCCTTTTGAACAAGGATTAAGGATTTAAGGGTGAATATATTAGGCTTAGTTTCTCTGTCTATGATTATTAATCCATGTCACTGAAAATTGGTGCTTGCATTCTCAAAATATTTTAATTGGAATTTGTTGTAGCTTTGCGAAATAATTCCCACGAAGACACATGTCTTGTTATTTCTTGTTATTTGATAATTTTTTATGCTTAATTCCAAATTTTCTTGTTTTGTTTAATATGTATAAGTAAACCGGTGAATAAAATAATCTCTTGGTACTCTCTTAAATAGGTGATTTAGATGGATCATACTAGCATACTAACTTCTTGGAACACCTAGACCGAATTAATTCGTTTATGTCATTTCTTTGGGTTACAAAACCATTTAGTTTGTTCATTTTTGGGTACTTGATCAGTTGATCACTACTCGGATTTTTTTGGGTACTTGATTGCGATAAAGGTCGATTGAGGAGTTTCTCCATGTGATTGACTGAATGTTGCTTCCCAAAGAAGTATTCTTAGGCTGGTTGAGATTTTGTTACCTGTTTCTAATAGGAGACGCCTGCAAAGGTAGGAGTTTGTTGTTGTCATATAGTTCAATCCTCTTGAAAATTTTGAGAATGAAAAGATATAAAAATTGAGTAAGGAATCTCTGCAACTAATGATGAGAACCATCCTTTAAGAGAAGAAGTGTATGCTACTGATGTTAGAACTTTGCCTCCTGGTAATCTACACCTTGGTCAATATGTACAAGTGTCATGAGGAAATAGATGTGTGTTGGGTGGGTGGTGGATAGAAATCTCCAAAGTTCTGAATAAAAGAAGTACATTGTGCAATTTGCTTTTACAGTTGATAAACGGGTTTGAGATGTCACCAAGATTGATTCACGGAAAATGGATAACCTCCAAGGTTTCCTCTTTCTTTTCTTGTTTGATAAATCTTAGTTTTCCTTGTATTATAGACCTCCAAGTTCAATGATATTTCCTCAGATCAGATTCCTTAGAAGTACAGAGTATGTTTACTTATTGCCCATAAAGTATCAAAGAGAAGGCCCTGAGCCCACAGAGAGCCGTGCTTACACAGACCTCTATTACTTTGAGAAATAGAAAACCATTATAGGAAGAAATTGTCAGTCTCATTGAAGCTGCTTCAATTTTTTGAAAAAAAGGATGCAGTATTCAGAATTCTCTCCAGTCACAGGGCCACACCAAAACAACCCCCCTTAGGCTAGATTTCTGTCCCAAATTAACTAGAAGAGCTTAACCTGTGATGTTTTTTTTCAACATGGAAATCTATGCTTCTGCTGTTGTATTGTAAATGGGAAATTCTATCCTAATCAGACTAGAATTAATAGAGATTGAAAACTTAAACAAAGTGGTGGCAAGCTGCAAACGATATTCACTTAATGTGTTCATGTTGTTCTATGTACTACATACATATCACCTTTTATTACAGGCTGATGCAAAACTATTCGAGCCCGTGCATGAGCTTCTCCGCAGTCCGCACCAAACATGCCCTGGTGGAGGTTGGACCAATGGCATATTTCTCCAAGTGTAATCTCTTGCAATGGTGCTTCAGACAAGTGGTCATGGAGGATAACATCCCCATTTTCTTCCTCCTTTCATCCACCGTGTTCATTGCTAAGCTCCATGCGTAAAGTGCTATGTGTATGGCTTTTGCTAGCAAACTTTTGTTATGTTGTATTGCTTCCAAGAAATTGTTATAAATTGTTATTGGTAATATTAACTCTTATTATTTTGAGTTTGCAATTGGATGTCCCTAGGAAATACACGTACAACTTCTGATTTGTTATTGTACTTTCGAACTATCAATGCACCTAAATTATAAGTGTATTTATAGATTTGTTGTATACTTCCATGCATGTAAATCTAATTTTAGCATAACAATTCTAGCATTTACCATCTTCCTTAAACTTACCATAATATTGAAAGTGTATGTGTTTTACTGAACATTTTTACAAGACGAATTTCTATACCTTTGGGGGACCGTGCGCTAGTAAGTATAAGGGAAGG

mRNA sequence

ATGCAAGTGAAACTTGGAAGAAATTCGAGTGATATAACAATTTGGAAGAAGATGAAAGTGGTTAAAAATGGAGAAACTAGAGAGCCTAGCTGGTGTACGGATGTCATTCATTCCCTTGAGAGAGTAGGAGGTTCTTTTCTAAAGCAGTCAGTCTATAAGGCTGATGCAAAACTATTCGAGCCCGTGCATGAGCTTCTCCGCAGTCCGCACCAAACATGCCCTGGTGGAGGTTGGACCAATGGCATATTTCTCCAAGTGTAATCTCTTGCAATGGTGCTTCAGACAAGTGGTCATGGAGGATAACATCCCCATTTTCTTCCTCCTTTCATCCACCGTGTTCATTGCTAAGCTCCATGCGTAAAGTGCTATGTGTATGGCTTTTGCTAGCAAACTTTTGTTATGTTGTATTGCTTCCAAGAAATTGTTATAAATTGTTATTGGTAATATTAACTCTTATTATTTTGAGTTTGCAATTGGATGTCCCTAGGAAATACACGTACAACTTCTGATTTGTTATTGTACTTTCGAACTATCAATGCACCTAAATTATAAGTGTATTTATAGATTTGTTGTATACTTCCATGCATGTAAATCTAATTTTAGCATAACAATTCTAGCATTTACCATCTTCCTTAAACTTACCATAATATTGAAAGTGTATGTGTTTTACTGAACATTTTTACAAGACGAATTTCTATACCTTTGGGGGACCGTGCGCTAGTAAGTATAAGGGAAGG

Coding sequence (CDS)

ATGCAAGTGAAACTTGGAAGAAATTCGAGTGATATAACAATTTGGAAGAAGATGAAAGTGGTTAAAAATGGAGAAACTAGAGAGCCTAGCTGGTGTACGGATGTCATTCATTCCCTTGAGAGAGTAGGAGGTTCTTTTCTAAAGCAGTCAGTCTATAAGGCTGATGCAAAACTATTCGAGCCCGTGCATGAGCTTCTCCGCAGTCCGCACCAAACATGCCCTGGTGGAGGTTGGACCAATGGCATATTTCTCCAAGTGTAA

Protein sequence

MQVKLGRNSSDITIWKKMKVVKNGETREPSWCTDVIHSLERVGGSFLKQSVYKADAKLFEPVHELLRSPHQTCPGGGWTNGIFLQV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17852.1Spo17852.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17852.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17852.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17852.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17852.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006281 DNA repair
biological_process GO:0036265 RNA (guanine-N7)-methylation
biological_process GO:0015824 proline transport
biological_process GO:0006680 glucosylceramide catabolic process
biological_process GO:0006370 7-methylguanosine mRNA capping
biological_process GO:0006508 proteolysis
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0005488 binding
molecular_function GO:0004482 mRNA (guanine-N7-)-methyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004348 glucosylceramidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008233 peptidase activity
RNA-Seq Expression