Spo17828 (gene) | SpinachBase

Overview


Name	Spo17828
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	Super_scaffold_7 : 1464797 .. 1478122 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATATATCAAGGCCACTAACTTTCCGTCAAAAAAAAAAGCCATTAACTTTGCGTCATTATTGATTTATTTCATTGTCATATTTCCATGTAAAATTCCGAACCGATAACATTTTTGATTTTCCTCATTATTTCTAAACGCTACAACAAAAAATGCTGGTACTAAGCCAAGCAGCAAGCAGTAGATGCTGCAACTGCTGCACTTCATCTACCTCATCTTCAATTTCGTCTACTCTCAAATTTTCTCATACAAACCCAACAATTACCCTTTTCTCCAAACGCACTCTTAAATCCAATTCCATCAAACCCAGAATTCGATTACCTCTCACTCTTGCCAAATCATCTGATTCTTCTTCTCCTGTTACCAAACAATCATCTCCTCCTCCTTCTTTCCCTGAAAACGACACTGTTTTTGTTGGCCCAGAATCTGTTCCTCTGGAAGGTGTTATTCAGTTTGATAAGCCCTCTTCTTCTTCCCGCTTTAAAAAATGGGGGTAACTTTTTTTAATTGGTTATTTTGTTTTTATTGGTTAACTTCAAGTTTAGGGTTCTGTAATTGTGGGATTTTAATTGGATTGTTCTTTTATTGCTGTCGTTAAGATTCTTTTTTTTATTCTTTTCTTAGAATTGAATTGCTTCTGTAACTCGAACATTTTTTTTATTATGTTCTTAGAATTTAATTGTTGCTGTTGATTATTTTGCAAAAAAAAACTCAGCCTGTACTATTTTGTTAAAAAATCAGGAAAGTTGCGTTATTAGCTGGTGGGGATGTATTGGCAATACTTCTGTTTGCTGCAATTGGAAGATTTAGCCATGGATTCCCTGTTTTTGAAGCTGAAACGCTGCGTACTGCTGACCCCTTCATTGCGGGTTTGTTATATTTTATTAACAGTTGAGCTATTGACTATCCATGAGAAGTGTTTAGATTTCGGGGTAATTCGTGTTGAAATTTGGTGCAGGATGGTTTCTTAGTGCATACTTCCTTGGAGGGTATAGTGAGGACGGTCGAGGGATGAATGGTTCGAGTAAGGCGGTAGCTGCTGCTGCTAAATCTTGGGCCTTGGGTATACCGGTAAGTCCGTTTTTTACCTTTCTCTGTTTGCACCATGAATTCACACTTGAAAGATCATGAAGTTTCATTGGTTAAGATGGTATATTTATTCTGAATGTCGATGTGAGTTCTTGGAAAGCTAAGGTATGCATTATAAAGGTAATACTGAATATACAAATGAGATTATCTAACAACTTTTGGGTGTTTGGAACTTTGGACTGGTTATTACTTAAGGAATGGGCTAGGTGATGGGAGAACTTTGTACAGGAGGTAGAGGGAGGGGGATGAGAGCAAGACGACGACCATGACTGCCGTGCAAATATAGCACAACAATTCCAGTAATACCAGGTACTTGTTCAAAAGGTAATTGAAAATGAGCCTTATGTACGTGGTAAACGGCTAAGCGCGATTGAGATGAAAGTGCCGCCCCTAATTTGCTTGAAGTTCATGAATATCACCAGTGAGATGGATAAGATAAATTAACAATCAATATATAAATAATGAACGACCAATATTAGAGTTCTCACCATAAGAGATGTTCTCAACATAAGGTGGTTCTCATGTGAATATATATATATATATATATATATATATATATATATACTTCCTCCGTTCCGGAAATATCGCACTATGGATGACTTTTACTCTTCTAGCCATTACTTTGATTCTTAATATCTCAAATCGTGTTCAAGTAAAAATTATAAAATTTAATATTTAGAAAATATATATCGATACAAATCTAACATGACCCCACATGACTAAAATTTTCTTACGTACGAATTGCAAAAAATGGCCAAAGTCGTAGTGTAAATAGTGTAAAAAATAAATGGTGCGATATTTCCGGAACGGAAGAAGTATATATATATGCACACCCAAATGAGAAGACACCTTATAATGAGAAGAATGAGAAGAAATCTACAACGTTCAAATGAGTAGATCAAATGACTCTAACTGCTTGTTTCATTCATGACAAAACCGTAAATATGGAAAACCCATAGACTAAAAGACTGTTAAGTTAGATATTTTACATCAAATGATATTCTTCTTCCTCCCAAGAGTCCCAACTATACCAGAGTTATTAATCTACATTTTCTCTCTCCTCTCAAGCATTCATCTGTTAGAGCAACCTCACCCTTCTTCTCTTATTCTCTCTCCGCGACCTCTCTTCCACTTAACCACTCGCCAACCACCACATTTTGTAGCAAGAAGCGGAACTACAAGAAAGCTTGCCCGATAGTAAACACAATATGAACAAATACAAAAAAAGAAAGAAGGAAGAGCCTAGTTGTTTGATTGAGGATCTAGTTCCTGTCTTACCTTCTAGTTATCCAAGTGACATGGGATCTCCCTGCCTGAGCCCCTTCTTCCCTTTTATGAAACTGTCTTCGCACCTGCATCAACCACCGCGCGGCCACCATCAATAGTAGTTGGTGATGATTTTATTATTTTGGCTTTTTACGGAGAAATTATATTACAGATTTATTTAGGGGAAAATGTCATTTTTGTTTGAGCTGTGAAATTGTTGTTGTTCTATTCATAGTGTTTGATAATAAGAAATCGAGATAAATTAGGAGGAAAAGGACGGAGATTTGGATAAACTTGCTCATTTTGTACAAATGAGCAAACTAAATTTACTCATTTTTGCAAATGAGCAAATTTTTTTTGCTCATTTGAAATGAGCAGAAATACTAATTATGCACAACTAATGTAGGAAAGTACAACAAAATAACGAAAATGAATTTGATTTAATATTTTTGGTTTGAGAAGATACAAAATCAATAACTGTATGAAGGAGAAATTAATTGGAAATAGCACTGGTACAGTCATTTTGGACGAATGAATCGGAAGCTAACAAGAACGAAAAATGAATCCTCTCTTTTCTCTCTCCTCAAACTTCAAAGACAAGCCACAAATTAATCACATATCTAGTGTTGCTTCTTCTTCAAGGTCTTGTTAACTGAAAATGGAGGATAGAGAAGAATGCGTGGGGTTTTATTTGGGTAAAATATGGAGGAGGTAGAAAGGGCTGTGCAATCTTACGGTTGTACTGTTTGCTATGAAATTAACGTAAGCCGTGAGATTAAATTATTTGGATGCTCAAGATCTCTTCTAATTCTTCTCATTATAAGGATCTTCTCATTGGACGGGGACCCTTAAATATGCTCTTAAAACCTCTTCGCTTAAATATATATACCTCTCCGTTCCTTAAATATGCTCTTAAAACCTCTTTGCTTCATTTCCATGAAGTAGAAGATGGTCGTCCCTTTGTCGTCCTGTTATTGCTTCTGGGTCAATTGCAAACAACCTCTCTGCAATTGCAGGGGTAAGGTTGCGTACGTCCAACCCGCCTTACCCCGCTTCTTGCGGGAGTCTATTTGAGGCAATGGGATAATGATAATGACAATGACTTCTCCGTCCTTAAATATTGCACCATTTTGTTTTTACACTATTTACACTTCGACTTTGACTATTTTTTGTGATTCATACCTAGGAAAAATTGTAGTTATTTGGGGTCATGTTAGATTCCTATCGATATATATTTTCTAAATATCAATTTTTTTAATTTTTTACTTATATATAATTTGAGATATTAAGAGTCAAAGTAATGTGTTAGAGGAGTAAAAGTCAACCATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGACTATCGTAAGAACACTTTACTCCGTAAGAACATTTCTCTCGGTAAGAACACTATGTGGAACATAGAATCAAATCAAATCTAACCAGCGAGATTAGCGAGATTTATTATCATGGTAATGGAATTTTCATAATATTTATGAACAAATACCCAAAGTTTTTATTTCACGCCATTCTTTATTTTAGATTCCTCTTTCTCTTTCTCTCTCTCCAATTCCCCCCTCTCTCTCCAATTCCTCTCTCCGGTCGTAGCCACCACCAACGCTCGTCGGTCGCTGCTCGGGGTGGTTCCTTCGTTGCCGCGAAATCGAAATCGAAATCGCTTTCTCAATCAGCCACTTCCTTCTCGTGGTGGTTCCTTCTCGCGGTGGTCACTTCTCGCCGGTCACTTCTCGCCGCTGCTCGCTGCCGCTCGAAACAGAACCAAAAATCAAACCAGAATAGCCGGTGTTCGAACAAAATCAATCGAAACTAGAACCAGAAATCAAACGAAATCGATTGTTCGAACAAATTCGCCGGTGTTCAAGCGTGGCGGCAACAATTGCGGTGGCGGAAACCGGTCGCTTCTCGCTGGTCGCTGCTCGCGGTGGTTCCTTCGTTGCTGCGAAATCGAAACCGATTGATTTCTCAATTTGAATGAAATCGCTGCTCGAGGTACCGTTAACACAGTGCACTCTTATCTTGCATTTCTCTATCTGAATTATCTACCTTACTAGCTCGAACTTTAAAAATAAGTTAAGGAAAACTAAGCATTAGTGGTGTAATCGGTTCAATTGATGGTGCGGCCGATTCAACCGATTCTGCTTTAATACTGGAATCGGTTCAATTGATAGTGTGGCCGATTTAATTGTTTTTGCTTTACTACTGAACTGCAGGAGTTTGCTGGTTGTTTGCGGTTGAAAGACATTTCTGGAAAATGTACTTGGATCTTGAAAAATGCAAAAATTCAAACATACTTTAATAAATTTAGAACATGCTTTAATACATTTTAGAACAAGCTTGAATAAAATTTGAACACTGTTGAATAAAGTTAGTACTCCGTACATGTTTGAATAAATTTAGAACATATTTGAATAAAGTTGGAACATGCTTGAATAAATTTATAACATGCTTGAATAAAGTTAGAACATGCTTACCCCGCTTCTTGCGGGAGCCTCTTTGAGGCAATGGGGTAATAATAATAAAGAGGCAATGGGGTAATAATAATGATATTGCTTGAATAAATTTAGAACACTGTTGAATAAATTTAAAACATGCTTGAATAAATTTAAAACATGCTTGAATAAATTTAAAACATGCTTGAATAAATTTATAACATGCTTGAATGAATTTAGAACATGCTCGAATAAATTTTGAACACTGTTGAATAAAGTTAGAACATGCTTGAATAAATTTAGAACATGCATGAATAAATTTAGAACATGCTTGAATAAATTTTGAAACACGGTTGAATAAAGTTAGAACATGCTTGGATAAATTTAGAAAGCTTGAATAAATTTAGAACATGCTTGATTAATTTTAGGACATGCTTGATTTAGTTTAGAACATTGTTGAATAAATTTAGAACATTGTTGAATAAATTTCGAATATGCTTGAATAAATTTAGAACATGAGCTTGAAAATTTGGAACATGGATGAATAATTATAGAACATGCTTGAATTAATTTAGAACATGAGCTTGAAAATTTAGAACATGGTTGAATAAATTTTAGAACATGCTTGAATCAATTTAGAACATGAGCTTGAAAATTTAGAACATGGTTGAATAAATTTTAGAACATGCTTGAATTAATTTCGAACATAGTTGAACAAATTTAGAACATCGTTGAACAAATTTAGAACATCGTTGAATAGATTTAGACTATGAAGCACGGATACTTCTCCGGAGTGTCGTTTCCCGTATCGGGGACGGGTATGGTACGGGTGCGGGACGGGTACGCCGGAAATACGTCCCCTGGACGACTCTTGAATGTTGGGGACGGCGGGTTCAGTAGGGGACGGCTAGGGAGGTTGATAGAGACTTTTTGGGGACGGATTTAAAGCTTTAAGACGTACCCTTCCCTCTTCTTCCTCTTCCCTCTTCTTCCTCTCTTTTTCTCAGATCTAGGCTTTACTTGGATAAAATTCGACTTACCCAGAAAATTGAAATTCGAAGCCCTAGATCTAGAAATTGACAGTAAGAGAAGGGGGGAGAAGAACAACGATATTGGGGCTTTTGTTGAAGAAAAAACGAGCTGATTGCACTCTTTAATTTTTTATTTTCACTGATAATTGACTAACCTAGATAATCATTCCATGGCTGGCTGCGTTTTCTTCACAGTGAGTTTTGCGTTGTTGGTGATAGTGATGGTGAGTTTGGCTGTCTAACATATAATTAATCTTAAAAATAAAAAAGTGGGAAGTGGTGGGTACCCACGTGGCCTTGTGTCTACCAGAGTGAGAGTACCATCTTAAAAATTAAAAAGTGGGAAGGGGTACCCACGTGGCCACTGCTTTATTTTACAAAAGGTCAACTTTTTTGTTTTCTACTCCATATCTATTACTCCTTTTAAACATAGTTAAGATAATATAAACTAATATAATTTAAGCATAGTATTATTTAATTTAAGGTTATATATATATATATATTATTTTATTTTATTTTTGCCGAATTCAAGCCGTACCCGTTTTTAGAAATTTTGATTTTTCCGTTTTCCGTCCCCGTCCCCGTACCCGTTCCCGTTCCCGTATCCGTATCCGTGCTACCTAGGATTTAGAACATCGTTGAATAAATTTAGAACATGAGATTGAAATTTTATAACATGGTTGAATAAATTTAGAACATGCTTGAATATATTTAGAACATGAGCTTGAAAATTTATAACATGGTTGAATAAATTTAGAACATTGAGAGTGTGAAAGTGTTCTTATTGATAGAAGTGTTCTTACATAAGGAGGTGTTCTTACCGGATCCCTCACCTATATATATATATATATATATATATATATATATATACACGCACACTATTTTCCATGGATGAACTATTTATGTGGATACTAGGTTCAAGTCTTTTGTTCTAATCTTTCATGTTTTTCCCTCGCGGTTCTCAAGCACCCAAAAAAAAAGGATATCAATTATACAAGTTTTGTGTCTAAGCAACGGGACATCTAATATATTCATGTTTGATTTTGTTCTAAACCAAATGTTCAGACTTTAATATTTTTGGAAGAAGTGAGTAATTTGATGTTTTTTGTTTGAGCTATGCTTTTGATTAGTAATGCTAATACTCTTGTTTCTTGCTTTTCATTACTGTCCATAGGTACTAAAAACATACTTCGTAGATAATCTCATTAAATTTCCCACTAAATAATTCGTTTTTTCTTCCTTGTGTTAGTACTTATAAGATCGTTTGACTTTCATGTATATATATACAAAAAGTCTACATTATGTCCTTTTATGATGAATCTTCGTTGTGTATGTTTCAAAGTTCCACATTTTTGTGTTGTTAGATTTCTAAATGAAATAGTGCATCCTCATTGAAGGTTATTACTGTTGTTTTCCCACATTTGATTCGCGTGATTTTAATTCATAAAATTATTGTCCATAGACTATTAGTCCTTTTTTTCATGGATGAAGTGCGTGTGTGCGGATAGCCGGATACTAGGTTCATATTGTTTAATCTTTTATTTTTCACATCTTGTGTTAAGCCCCAAAATGAAAGATATCGTACTAGTTTTGTGTAAGAGTCTAACTCATGGGATTTCTACTAAATCATGTTTGATTTTGTTTGGAACTTGAATTTTTTTGAAAGAACTAGTGCTTTTTACTTTTTGTTTGAGCTAGCTTTTGTTTAGAAGTTCTAATTCTCTTGTTTCTTGCTTCTTATTAGTTTCAACAGAAGCACAAAACATAAGCAACCTCCTTTAATTTCCCACTGAATGTTACCTTCTTACTTTTTATTACTTATAAGAGCATTTGTTTTTTAATGAGTACAGAAAAAGTCTACATCCTTTTTTTTTGTGAACCTTCGTTGCATATGTTACCGACTTCCACATTTTTGTGGTGTTGGATTTGAAATTCTCATTGAAAGTTAACTATTCTTTTTAACATTTATTCACGTGATTTAATATTGTCACAATTGTGTAAATCCGTAAAACATCATGTAATGGATTTCTGTTACTTCATTAAGTGAAAATGAATGTCCATTGAGCACGCACAATAGTGCCTCATTGCAAGGGTCAAGTGGGTATTGACCCTGTAAATTCCTTACGATGTTGCCCCACACCTTTGGTCAAGAGATTTACGTACTTGCCATGGCCCATGGGTCACATATGAGACCAAGGATTATTTGTGAAGTAACTGCCAATTTTCTCTCATTAAACATGAATGAATCTAATGGTTATAATTGCACAGTTTTTATAAATTAGAATATAAATTATAGTACTATTTACATACATTTATGAAAATACATAATATCAATAAGATAGACAATTTTTTTAATAATCACCAATTGTAATCCGATTAAAAAACAATTAGTTGTTAGAATTAAGGATTTTTTTTTTACATAATTCTCTGGCATGTTTTTTAACACCTTGGTTAAATTATTTTTTATTTTTACACCTTAAAAATTTTAAAAATTGGTTTTTGACACCCGTTAACAAATCATGTCCAAAAATCCGTTAGTTGGGCCACATATTCTTTTACTCTCTTTGTTTCCCACAATTTTCTTTATTTAATCTACCACCATTCTTCATCTTCTTCTACCTCCATTAATTCACAAATTCACAAATTCATTACCCAATCAAACCTGAAATCACTTATAATAAAATGAAAGATAACAAATCTATCCACATTCTGGACAAAAATAAAGGGGAAGCAATTACCTTGACAGTAAAATCATGGATGGTTTTCTCAATAGCTGCTCTAGCATGAACTCTAGTAGAAGAAGAATTCTGTTAATTTACAGAAAACCCATCTTGAAAAAATGATGAAAAGACCCAAGTGGGAATTTTCTGGAAATTGAGTGAAGAACTACTGAAGGGTAACAAACATTTGGGCGATTTCTCGCATTAGGAATTGAAAATGAGGGTAAAGGGGTGCTGAAAGTTGAAGAGAAAGACATGGAATTGGAGTTTGATGGGTTTAATTTGCAGCGAATCGTTGTAAATTTTGCAAGGAGATTGTAGATTTGTAGTGGCAGTTGAGGAGCACATGTGGTGAAATCTAATGAATGCTAAACTATAACCATATTCTAAAAAAAATGTCAGAAATTGGATCAAACATACTGTATTAAGCATTGAATTATGAATTTAGAACTTTTCCATAGTATAATTTTACCAGCTTATACTTTGATTGAGTAATGAATTAAGTATTTACAAATTTGTGAATTGATGGAGGTAGAACAAGAAGAATGAAGTAGAGAAAACGTGGGAAAGAAGGAGAAAGAAAGAATATGTGGGCCAACTAATGGATTTTTGGACAGAATCCTTTAACTGGTGTTAAAAGCCTTTTTCTTAAATTTTAAGGTGTTTAAATATAATAAAAGTTAACTAAGGTGTTAAAAACAAAACGGAGTTTTTTAAAATCCTAGATTAAGTATAGGGAAGAGAATTTGAGGTGGGGTATATGATGGCATCATATGCAAAAATTAACTATTTATGAATTCGGCAACTTTTCTGTAAGACCGCCTTATCGAAAAGACCGCTTTAATTGCTTAGCTAATTGGTTTCATTGCTTTACTTATTAGTTCCAGAGCTTAACTAATTGGTTTACGTGCTTAACTAATTAGTTAAAGTGCTTAACTAATTGGTTTTATTGCTTAACTTATATAACACCAAGGCAGCCTTTTGTGTAAGACAGCCTTACATAAAAGTTTGTATTATGAATTTTGAAAAGTTCTAATCATGTTTGATATGGTGGAAATATAAATATATAATCTTATCAATTAGACCTAAAGCGACAGAGAGACAAGGCTAAACATTGAAATTTGTGAAATTTGTGAAATTTGCAGTGCTTCAAGATTCTTCTTAAAAGAGTGCTCTTAGTTTTTATGAATGTTATCTTATCAAGTGGCAGGATCTTGAAGACTAGATGAAACATGGCATAGATGGAAGTTATAAACATCATATTGAATGCCCAAGGGAAAAAAGATAATTAATAGTGTTCCAAAGCTTATTAGCTTGACGATACAACAAAAAACTTGTTCATGGTTTATCCTGCGGTTTTTTAACAATCTAAAGATAACTCCTGCTTTTTCGTCATGGAGACAAGTTTCTAGTTGTTTTTTACTTTATCATCTCTTGGCCTTCCTGTGTGTTCAAGTCTTCTGCTGATAATTTTTCTTTTGTCAAATAGAGTATACTAAAGTATCTCTCCTTCCACCATCTAGTAGTTATAAGATTTAAAATACATAAAAACAAACCTAACATTGTTGGTCTTCCACCACTTCTTTTTTCTTTCAACAGGTAACAATTTTGATTTTTGGTCTATTAAAGAAATATTATGGTATTAGAAGCTTGAAATTATTGGTCACCTTAATGAGTAGTTTAACAACTATTGAAGGAAAGACGCTTATCGTGCTGACAGACAAATTTAAAACTAGAGATACAGCCGTGGAGGGCAGGAGAAATTGCCAGTTAATGTTTGCTTACGGGGTAGTGCATGATGTAGACTGGTTGCAATGCTATATTGACCAACAATACGTAAAAGCTTTCCTGGAATTCTGCTGAATCTTTTGCATCAGTTAGGACCCCCTTGTCCCTACACTCTATATATGAAAAGGAGAGAAGAGAGAAGTATCAGATGTAAGAAGAGATTTAAGGGTGGTGGGTTGGCAGGAGGAAGGATGAAATAGTTGGGAAGAGTACTAGAAGTATCCAACTTGTATAAGGAAAGCTTTTCTACATTTTTCTATTCTATTTCATGGATTCACCTCAATATCCGTATCCATTCAAGGTGCTGGATTCAGACAGGACATTGATATGATAAGGTTATTGGAGAGTCAGATTAACAGAGGAGTTAATATCACCCATAGCCTATGAATTCTTGCTCAGTTGGTAAACCGAAGTAATGATGTTCATTTCGGTTCACGAACATTTGCTTTTATATTAAAGTCATATTGAACTATAGATATGCAACTTGCAACAGTTTAAGTTATACTACCTCTTTTTCACCAGTAACCCTGATTCCTATCTTCAATTGTGGATCATACTTCTGATAGTTAACCGTAACCTTGATACAAAATACTGTGAATTGGAAAATTTACGAAGTTGCAACCAAATGTGACGAGGTATAAATTTTCATCTATGCTGCCCACAAAATTTTAATTTTTTTCGGGAGTTGGCCGAAAATGGATCTAGAAAATTACTAAAAGTCTACAATAGCAATCATAGTAGCAGAGAGTGAACATTATTTTTATATTGCACATTTTATTCCTCTCTGGTTCAAGATTTCAAACTAGATTTTTGATAGTTGAAGTTTTGTACATTGGAATCATTGGATATACACAAACGCTACACTGACTCTATGTGCCTCGATGAACTTATTTCTGGCTTTCTTTCGCAGATGGGATTGGGTGTACGCACATTAACTTCAGCACATTTGCCTCCCATCAATTTTATTTTGGTCACTCTAGGAAGCACAGCAGTTCTTCTAATTGGCTGGAGGACACTACTGTTCCAGATTCTTCCTAGTGGCAAGAGCAAGAAAGATGATATGTACAAACGTGGAAGTCCATTTGAACTGTTTGAGGTATCAAATGCTCTCCTACACAAACCTCACTTCTTCGCTAGTATTTTACAGTTAGAAAAAAAATTCCTATTATTAAGCTTTTGTAGATTTCTTGAGCAGATTTTGTTTTCTATCTCCATCTCATTGAGTGGCTTACAAAGATCACACTTCTGATAAAATTACTCCAACTGTTGAATGCTCAGTTAGTAGTATTAACCTTGAGCATAAGTGACATTTTGACAATGATAACTGCGAATGAGGGGGCACATAGCTTATTTTTGTCAATAAGTTCAGATAAGAAAATGAGTGCCTTAGCTTGGCCACAATTCCCCCTCCCCCCCTAAGTATTTGGCATAGCTTTCTCTGTTCATTGAGGAATAAAGCACTTGTGTGATATTGTGATACTTGTAACCAAACACAGCATGCTTCATTGAGGAACGGCTTATCAACCTGTCTGAAGTCTATTGGTAAGAGATAGTGTTGCATGTATTCCGTTCTGATTTGATGTTCTTTTCTCATTCCTATATTTCTTAGGGGCTGCATAGTGTTTACTTGGTGCTTGATGGTGGAGTTTAGCCATGCTAGAATGTGTTCAGTGCTACTCCGTATTTCTATGTTTGATTAATCGATTATCTAGTTTGTAGTGGCGTCGGAGCAGAAATTATCTAAAATTACTCTTAGTGAAAGATAATCCATTTGTCATTCTGTAGTTGGTGTTTTTGGTTGAATCCTATATACTTGGCTTCGTTCGTGGAGTCGAAGTTTGTTCAAGCCAAGATTGGAGGATTTTTAATGTTCTAAAAATTCTTGTTCGAGCTTAGGTCGTTAAGTGTTTGGCTTTTTCGAGCTTTTAGGTCGTTAAGTGTTTTGGCTTGTTCGAGCTTTAACAGAGCTTGAAGAGTTATCCGAGCTTAAATAGAGCTTGATTCAATAAATAAGGCTTGAGTTACCTTATTAAATATGGGATTTCTTTAAAGGTCTTGTCCATCCATTTAACAATATTTAAGTTTTAGTCATTTCTCATATATATGGCCCCTAAGATACCTTGGGGAACTGAAGCAAGTCGTTCAAGTTTATCTCATTTGCTAAACGAGTAGTTATGAGTGCATGTTGGCTAAAAAGCGTGATTGTTTTTATGTGTTGCAGCTGCTTACTTCATTGGTTAGGAGGTGGTGAAAAGTGGCTTCATGCCTTTTGGGTAATTTCTGAGTTTCATTCTAGTGTACTACACGAAAATACAAGTTGTATCTACATCTTTCGAGATTGTAACGTATGTTAAATTGTTTTGAATCTATCAGGTTTAATACTTATTCTCTAATCCAAATGGAGGATTTGTTGTATTGTATGAACTATTGAACCGCACATTCGACACACATAAATCGAGTATCATAAAATTCTAGACTGGAGCAACAAAGATTTCCTTATGTTTGGTAACTTCGTTTCAAGGATGCTAACATGGATGTTGTGTTGGAGAAATTTGACACTGAAGCTAGGTCGGAAAGCTATACAAATTTCAATGAACGCACTTGGCTTAATTTATTTTAATGGAAAACACTTTTTGGAAAGCTGGAAAACAATTTCCCTTAAGGGAAAAACAACTTTCCTTTAGGCCTCGCCTGAATTCCTTGAAATAATTAATAGGGTAAAATCTATGGGATAATTTCTACTGTAGGATTTGTTAAGGGGGTAATTTATCATTTCTTTAAGTTTGACATTATTCATTGGATATTGGGGTGAATTTCTATCCTTTTTTCTCAAATAACTGATTTCATCCCACCAACTCAGAAACACCAGGCCACCGCACAAGCACAGTCGCCGCCTCTATAATTCGACCACCACCTTGTCAACCGCCAAATACGACTCTGCACCA

mRNA sequence

GAAATATATCAAGGCCACTAACTTTCCGTCAAAAAAAAAAGCCATTAACTTTGCGTCATTATTGATTTATTTCATTGTCATATTTCCATGTAAAATTCCGAACCGATAACATTTTTGATTTTCCTCATTATTTCTAAACGCTACAACAAAAAATGCTGGTACTAAGCCAAGCAGCAAGCAGTAGATGCTGCAACTGCTGCACTTCATCTACCTCATCTTCAATTTCGTCTACTCTCAAATTTTCTCATACAAACCCAACAATTACCCTTTTCTCCAAACGCACTCTTAAATCCAATTCCATCAAACCCAGAATTCGATTACCTCTCACTCTTGCCAAATCATCTGATTCTTCTTCTCCTGTTACCAAACAATCATCTCCTCCTCCTTCTTTCCCTGAAAACGACACTGTTTTTGTTGGCCCAGAATCTGTTCCTCTGGAAGGTGTTATTCAGTTTGATAAGCCCTCTTCTTCTTCCCGCTTTAAAAAATGGGGGAAAGTTGCGTTATTAGCTGGTGGGGATGTATTGGCAATACTTCTGTTTGCTGCAATTGGAAGATTTAGCCATGGATTCCCTGTTTTTGAAGCTGAAACGCTGCGTACTGCTGACCCCTTCATTGCGGGATGGTTTCTTAGTGCATACTTCCTTGGAGGGTATAGTGAGGACGGTCGAGGGATGAATGGTTCGAGTAAGGCGGTAGCTGCTGCTGCTAAATCTTGGGCCTTGGGTATACCGATGGGATTGGGTGTACGCACATTAACTTCAGCACATTTGCCTCCCATCAATTTTATTTTGGTCACTCTAGGAAGCACAGCAGTTCTTCTAATTGGCTGGAGGACACTACTGTTCCAGATTCTTCCTAGTGGCAAGAGCAAGAAAGATGATATGTACAAACGTGGAAGTCCATTTGAACTGTTTGAGGTATCAAATGCTCTCCTACACAAACCTCACTTCTTCGCTAGTATTTTACACTGCTTACTTCATTGGTTAGGAGGTGGTGAAAAGTGGCTTCATGCCTTTTGGGTAATTTCTGAGTTTCATTCTAGTGTACTACACGAAAATACAAGTTGTATCTACATCTTTCGAGATTGTAACGTATGTTAAATTGTTTTGAATCTATCAGGTTTAATACTTATTCTCTAATCCAAATGGAGGATTTGTTGTATTGTATGAACTATTGAACCGCACATTCGACACACATAAATCGAGTATCATAAAATTCTAGACTGGAGCAACAAAGATTTCCTTATGTTTGGTAACTTCGTTTCAAGGATGCTAACATGGATGTTGTGTTGGAGAAATTTGACACTGAAGCTAGGTCGGAAAGCTATACAAATTTCAATGAACGCACTTGGCTTAATTTATTTTAATGGAAAACACTTTTTGGAAAGCTGGAAAACAATTTCCCTTAAGGGAAAAACAACTTTCCTTTAGGCCTCGCCTGAATTCCTTGAAATAATTAATAGGGTAAAATCTATGGGATAATTTCTACTGTAGGATTTGTTAAGGGGGTAATTTATCATTTCTTTAAGTTTGACATTATTCATTGGATATTGGGGTGAATTTCTATCCTTTTTTCTCAAATAACTGATTTCATCCCACCAACTCAGAAACACCAGGCCACCGCACAAGCACAGTCGCCGCCTCTATAATTCGACCACCACCTTGTCAACCGCCAAATACGACTCTGCACCA

Coding sequence (CDS)

ATGCTGGTACTAAGCCAAGCAGCAAGCAGTAGATGCTGCAACTGCTGCACTTCATCTACCTCATCTTCAATTTCGTCTACTCTCAAATTTTCTCATACAAACCCAACAATTACCCTTTTCTCCAAACGCACTCTTAAATCCAATTCCATCAAACCCAGAATTCGATTACCTCTCACTCTTGCCAAATCATCTGATTCTTCTTCTCCTGTTACCAAACAATCATCTCCTCCTCCTTCTTTCCCTGAAAACGACACTGTTTTTGTTGGCCCAGAATCTGTTCCTCTGGAAGGTGTTATTCAGTTTGATAAGCCCTCTTCTTCTTCCCGCTTTAAAAAATGGGGGAAAGTTGCGTTATTAGCTGGTGGGGATGTATTGGCAATACTTCTGTTTGCTGCAATTGGAAGATTTAGCCATGGATTCCCTGTTTTTGAAGCTGAAACGCTGCGTACTGCTGACCCCTTCATTGCGGGATGGTTTCTTAGTGCATACTTCCTTGGAGGGTATAGTGAGGACGGTCGAGGGATGAATGGTTCGAGTAAGGCGGTAGCTGCTGCTGCTAAATCTTGGGCCTTGGGTATACCGATGGGATTGGGTGTACGCACATTAACTTCAGCACATTTGCCTCCCATCAATTTTATTTTGGTCACTCTAGGAAGCACAGCAGTTCTTCTAATTGGCTGGAGGACACTACTGTTCCAGATTCTTCCTAGTGGCAAGAGCAAGAAAGATGATATGTACAAACGTGGAAGTCCATTTGAACTGTTTGAGGTATCAAATGCTCTCCTACACAAACCTCACTTCTTCGCTAGTATTTTACACTGCTTACTTCATTGGTTAGGAGGTGGTGAAAAGTGGCTTCATGCCTTTTGGGTAATTTCTGAGTTTCATTCTAGTGTACTACACGAAAATACAAGTTGTATCTACATCTTTCGAGATTGTAACGTATGTTAA

Protein sequence

MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTLAKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRTLLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHKPHFFASILHCLLHWLGGGEKWLHAFWVISEFHSSVLHENTSCIYIFRDCNVC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17828.1	Spo17828.1	mRNA

Homology

[Close]

BLAST of Spo17828.1 vs. NCBI nr
Match: gi|731314627|ref|XP_010687615.1| (PREDICTED: uncharacterized protein LOC104901710 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 380.9 bits (977), Expect = 2.100e-102
Identity = 204/266 (76.69%), Postives = 224/266 (84.21%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60
           MLV S  +SS+CC+CCTSS+SS   S  K SH+ PT TLFSKR L+  +     R PL L
Sbjct: 1   MLVNSVPSSSKCCSCCTSSSSS--FSLNKLSHSTPTTTLFSKRNLRCKTTTQITRFPLIL 60

Query: 61  AKSSDSSSPVTKQS--SPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVAL 120
           AKSSDSS+PVTKQS  S  P    NDTVFV P+SVPLEGVIQFDKPSSSSRFKKWG+VAL
Sbjct: 61  AKSSDSSTPVTKQSPTSSSPLSDNNDTVFVSPDSVPLEGVIQFDKPSSSSRFKKWGQVAL 120

Query: 121 LAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGS 180
            AGGDVLAILLFAAIGRFSHGFPVF+AETLRTADPFIAGWFLSAYFLGGY EDGRG+NG 
Sbjct: 121 FAGGDVLAILLFAAIGRFSHGFPVFDAETLRTADPFIAGWFLSAYFLGGYGEDGRGVNGV 180

Query: 181 SKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRTLLFQILPSG 240
           + AV+AAAKSWALGIP+GLG+R LTSAH PP NFILVTLGSTAVLLIGWRTLLFQILP  
Sbjct: 181 NVAVSAAAKSWALGIPIGLGIRALTSAHFPPTNFILVTLGSTAVLLIGWRTLLFQILPRD 240

Query: 241 KSKKDDMYKRGSPFELFEVSNALLHK 265
           KSKKDDMYKRGSPFELFE+  +L+ +
Sbjct: 241 KSKKDDMYKRGSPFELFELLTSLVRR 264

[Close]

BLAST of Spo17828.1 vs. NCBI nr
Match: gi|902188336|gb|KNA11111.1| (hypothetical protein SOVF_137900 [Spinacia oleracea])

HSP 1 Score: 370.5 bits (950), Expect = 2.800e-99
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60
           MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL
Sbjct: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60

Query: 61  AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA 120
           AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA
Sbjct: 61  AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA 120

Query: 121 GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK 180
           GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK
Sbjct: 121 GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK 180

Query: 181 AVAAAAKSWALGIP 195
           AVAAAAKSWALGIP
Sbjct: 181 AVAAAAKSWALGIP 194

[Close]

BLAST of Spo17828.1 vs. NCBI nr
Match: gi|702360778|ref|XP_010059817.1| (PREDICTED: uncharacterized protein LOC104447798 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 303.1 bits (775), Expect = 5.500e-79
Identity = 166/273 (60.81%), Postives = 205/273 (75.09%), Query Frame = 1


		  
Query: 1   MLVLSQA------ASSRCCNCCTSSTSSSISSTLK--FSHTNPTITLFSKRTLKSNSIKP 60
           ML+LSQA      + S CC CC+S++S + ++     FSH  P    FS R   S    P
Sbjct: 1   MLLLSQAPAGALSSKSSCCCCCSSASSIAFAAARPPLFSHRMPN---FSSRARPSRP--P 60

Query: 61  RIRLPLTLAKSS-DSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFK 120
             RL L  A  + D++S  T++    P F   DTVFVG ESVPLEGVIQF+KPSS+SR K
Sbjct: 61  PSRLALAKADDALDTASAATRRPPSSPPFDGGDTVFVGQESVPLEGVIQFEKPSSASRLK 120

Query: 121 KWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSED 180
           KWG+VALLAGGDV+A+LLFAAIGRFSHGFPVF+ ETLRTADPFIAGWFL AYFLGGY+E+
Sbjct: 121 KWGRVALLAGGDVVALLLFAAIGRFSHGFPVFDLETLRTADPFIAGWFLGAYFLGGYAEN 180

Query: 181 GRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRTLL 240
           GRG NG SKAV + +KSWA GIP+G+ +R + S+H+PP NFILVT+GSTAVLLIGWRTLL
Sbjct: 181 GRGENGLSKAVLSTSKSWAFGIPLGIAIRAVLSSHIPPYNFILVTMGSTAVLLIGWRTLL 240

Query: 241 FQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
             +LP+ +SKK D+Y+RGSPFELFE+  +L+ +
Sbjct: 241 CSVLPNEESKKSDVYRRGSPFELFELLTSLVRR 268

[Close]

BLAST of Spo17828.1 vs. NCBI nr
Match: gi|645227205|ref|XP_008220404.1| (PREDICTED: uncharacterized protein LOC103320498 [Prunus mume])

HSP 1 Score: 299.7 bits (766), Expect = 6.100e-78
Identity = 168/275 (61.09%), Postives = 202/275 (73.45%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLK-SNSIKPRIRLPLT 60
           MLVL QA S        S+   S+SS  KF + NP   LFS R  + ++   P   L +T
Sbjct: 1   MLVLGQAPSG-----ALSARRCSLSSPPKFINPNPP--LFSNRKPRFASKTNPSKSLNIT 60

Query: 61  LAKSS---DSSSPVTKQS-------SPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSR 120
           LAK+    DS+S  TKQ+        PPPS   +  VFVG E++PLEGVIQF+KPSSSSR
Sbjct: 61  LAKADGGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVFVGQENIPLEGVIQFEKPSSSSR 120

Query: 121 FKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYS 180
            +KWG+VALLAGGDVLA+L FAAIGRFSHGF VFE ETLRTADPFIAGWFLSAYFLGGY 
Sbjct: 121 LRKWGRVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYG 180

Query: 181 EDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRT 240
           +DGRG+NG SKA+ A AKSWALGIP+G+ +R  T+ HLPP  FILVT+GSTAVLL+GWR 
Sbjct: 181 KDGRGVNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRA 240

Query: 241 LLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
           LL++ LP  KSKK D+Y+RGSPFELFE+  +L+ +
Sbjct: 241 LLYKFLPGDKSKKSDVYRRGSPFELFELLTSLVRR 268

[Close]

BLAST of Spo17828.1 vs. NCBI nr
Match: gi|596159324|ref|XP_007222898.1| (hypothetical protein PRUPE_ppa009971mg [Prunus persica])

HSP 1 Score: 298.5 bits (763), Expect = 1.400e-77
Identity = 168/275 (61.09%), Postives = 201/275 (73.09%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLK-SNSIKPRIRLPLT 60
           MLVL QA S        S+   S+SS  KF  TNP   LFS R  + ++   P   L +T
Sbjct: 1   MLVLGQAPSG-----ALSARRCSLSSPPKF--TNPNPPLFSNRKPRFASKANPSKSLNIT 60

Query: 61  LAKSS---DSSSPVTKQS-------SPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSR 120
           LAK+    DS+S  TKQ+        PPPS   +  V VG E++PLEGVIQF+KPSSSSR
Sbjct: 61  LAKADGGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVVVGQENIPLEGVIQFEKPSSSSR 120

Query: 121 FKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYS 180
            +KWG+VALLAGGDVLA+L FAAIGRFSHGF VFE ETLRTADPFIAGWFLSAYFLGGY 
Sbjct: 121 LRKWGRVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYG 180

Query: 181 EDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRT 240
           +DGRG+NG SKA+ A AKSWALGIP+G+ +R  T+ HLPP  FILVT+GSTAVLL+GWR 
Sbjct: 181 KDGRGVNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRA 240

Query: 241 LLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
           LL++ LP  KSKK D+Y+RGSPFELFE+  +L+ +
Sbjct: 241 LLYKFLPGDKSKKSDVYRRGSPFELFELLTSLVRR 268

[Close]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D4J5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g014670 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.500e-102
Identity = 204/266 (76.69%), Postives = 224/266 (84.21%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60
           MLV S  +SS+CC+CCTSS+SS   S  K SH+ PT TLFSKR L+  +     R PL L
Sbjct: 1   MLVNSVPSSSKCCSCCTSSSSS--FSLNKLSHSTPTTTLFSKRNLRCKTTTQITRFPLIL 60

Query: 61  AKSSDSSSPVTKQS--SPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVAL 120
           AKSSDSS+PVTKQS  S  P    NDTVFV P+SVPLEGVIQFDKPSSSSRFKKWG+VAL
Sbjct: 61  AKSSDSSTPVTKQSPTSSSPLSDNNDTVFVSPDSVPLEGVIQFDKPSSSSRFKKWGQVAL 120

Query: 121 LAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGS 180
            AGGDVLAILLFAAIGRFSHGFPVF+AETLRTADPFIAGWFLSAYFLGGY EDGRG+NG 
Sbjct: 121 FAGGDVLAILLFAAIGRFSHGFPVFDAETLRTADPFIAGWFLSAYFLGGYGEDGRGVNGV 180

Query: 181 SKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRTLLFQILPSG 240
           + AV+AAAKSWALGIP+GLG+R LTSAH PP NFILVTLGSTAVLLIGWRTLLFQILP  
Sbjct: 181 NVAVSAAAKSWALGIPIGLGIRALTSAHFPPTNFILVTLGSTAVLLIGWRTLLFQILPRD 240

Query: 241 KSKKDDMYKRGSPFELFEVSNALLHK 265
           KSKKDDMYKRGSPFELFE+  +L+ +
Sbjct: 241 KSKKDDMYKRGSPFELFELLTSLVRR 264

[Close]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX90_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137900 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.000e-99
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60
           MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL
Sbjct: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRLPLTL 60

Query: 61  AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA 120
           AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA
Sbjct: 61  AKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSRFKKWGKVALLA 120

Query: 121 GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK 180
           GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK
Sbjct: 121 GGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYSEDGRGMNGSSK 180

Query: 181 AVAAAAKSWALGIP 195
           AVAAAAKSWALGIP
Sbjct: 181 AVAAAAKSWALGIP 194

[Close]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Match: M5XDA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009971mg PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.500e-78
Identity = 168/275 (61.09%), Postives = 201/275 (73.09%), Query Frame = 1


		  
Query: 1   MLVLSQAASSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLK-SNSIKPRIRLPLT 60
           MLVL QA S        S+   S+SS  KF  TNP   LFS R  + ++   P   L +T
Sbjct: 1   MLVLGQAPSG-----ALSARRCSLSSPPKF--TNPNPPLFSNRKPRFASKANPSKSLNIT 60

Query: 61  LAKSS---DSSSPVTKQS-------SPPPSFPENDTVFVGPESVPLEGVIQFDKPSSSSR 120
           LAK+    DS+S  TKQ+        PPPS   +  V VG E++PLEGVIQF+KPSSSSR
Sbjct: 61  LAKADGGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVVVGQENIPLEGVIQFEKPSSSSR 120

Query: 121 FKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGYS 180
            +KWG+VALLAGGDVLA+L FAAIGRFSHGF VFE ETLRTADPFIAGWFLSAYFLGGY 
Sbjct: 121 LRKWGRVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYG 180

Query: 181 EDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWRT 240
           +DGRG+NG SKA+ A AKSWALGIP+G+ +R  T+ HLPP  FILVT+GSTAVLL+GWR 
Sbjct: 181 KDGRGVNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRA 240

Query: 241 LLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
           LL++ LP  KSKK D+Y+RGSPFELFE+  +L+ +
Sbjct: 241 LLYKFLPGDKSKKSDVYRRGSPFELFELLTSLVRR 268

[Close]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Match: B9R6V7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586320 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.700e-77
Identity = 165/282 (58.51%), Postives = 203/282 (71.99%), Query Frame = 1


		  
Query: 1   MLVLSQAA----SSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKSNSIKPRIRL 60
           ML++SQ A    S+R C C   S         KF+H  P +   +  T        + R 
Sbjct: 1   MLLVSQGAGGGLSARRCTCTHISPP-------KFAHKKPPLFFSNNATAGGPKFISKKRQ 60

Query: 61  P----LTLAKSSDSSSP-----VTKQS-----SPPPSFPENDTVFVGPESVPLEGVIQFD 120
                LTLAK++D SS       TKQS     SPPPSF  ++TVFVG E+VPLEGVIQF+
Sbjct: 61  SFYHHLTLAKAADGSSDSPTSSTTKQSPSTNNSPPPSFRTDETVFVGQENVPLEGVIQFE 120

Query: 121 KPSSSSRFKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSA 180
           KPSSSSR  KWG+VAL++GGDVLA+LLF+AIGRFSHG+ VF+ ETLRTADPF+AGWFL A
Sbjct: 121 KPSSSSRLDKWGRVALISGGDVLALLLFSAIGRFSHGYSVFDFETLRTADPFVAGWFLGA 180

Query: 181 YFLGGYSEDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAV 240
           YFLGGY EDGRGMNG SKAV AA KSWA+GIP+GL +R +TS H+PP  F+LVT+GSTAV
Sbjct: 181 YFLGGYGEDGRGMNGPSKAVIAAVKSWAVGIPLGLIIRAVTSGHIPPYTFVLVTMGSTAV 240

Query: 241 LLIGWRTLLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
           LL+GWR LL  ILP+ +SKK+D+Y+RGSPFELFE+  +L+ +
Sbjct: 241 LLVGWRALLSSILPTNESKKNDVYRRGSPFELFELLTSLVRR 275

[Close]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Match: W9ST75_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003767 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.000e-76
Identity = 170/279 (60.93%), Postives = 198/279 (70.97%), Query Frame = 1


		  
Query: 1   MLVLSQAA----SSRCCNCCTSSTSSSISSTLKFSHTNPTITLFSKRTLKS-NSIKPRIR 60
           MLVLSQA     S+R C+  +S  S           T P   LFS R  KS +++ P  R
Sbjct: 1   MLVLSQAPGGALSARRCSLRSSPAS-----------TTPNSPLFSNRKSKSLSTLNPTKR 60

Query: 61  LPLTLAKSS---DSSSPV-------TKQSSPPPSFPEND-TVFVGPESVPLEGVIQFDKP 120
             LTLAKS    DS+SP        T  SS   S   ND T+FVG E+VPLEGVIQFDKP
Sbjct: 61  FNLTLAKSDKALDSASPSAAKPSLSTPSSSISSSAIGNDQTIFVGDENVPLEGVIQFDKP 120

Query: 121 SSSSRFKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYF 180
            SS+RFKKWG+VAL +GGDVLA+LLFAAIGRF+HGF VF+ ETLRTADPFIAGWFLSAYF
Sbjct: 121 DSSARFKKWGQVALFSGGDVLALLLFAAIGRFNHGFSVFDVETLRTADPFIAGWFLSAYF 180

Query: 181 LGGYSEDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLL 240
           LGGY EDGRG NG+SK V   AKSWA+GIP+GL +R  T+ H PP NFILVT+GSTAVLL
Sbjct: 181 LGGYGEDGRGRNGTSKGVVVTAKSWAVGIPLGLIIRAATTGHFPPFNFILVTMGSTAVLL 240

Query: 241 IGWRTLLFQILPSGKSKKDDMYKRGSPFELFEVSNALLH 264
           +GWR LL+ +LPS K+KK D+Y+RGSPFELFE     L+
Sbjct: 241 VGWRALLYNLLPSDKTKKSDVYRRGSPFELFETRRRFLN 268

[Close]

BLAST of Spo17828.1 vs. TAIR (Arabidopsis)
Match: AT1G44920.1 (unknown protein)

HSP 1 Score: 271.6 bits (693), Expect = 6.300e-73
Identity = 138/216 (63.89%), Postives = 169/216 (78.24%), Query Frame = 1


		  
Query: 51  KPRIRLPLTLAKSSDSSSPVTKQSSPPPSFPENDTVFVGPESVPLEGVIQFDKPSS--SS 110
           +PR+ L L+    S +S P T  S  P S  E  TVFVG ++VPLEGVIQFDKPSS  SS
Sbjct: 44  RPRVVLALSNPDGSVNSKPSTSASQIPSSGDE--TVFVGQDNVPLEGVIQFDKPSSTSSS 103

Query: 111 RFKKWGKVALLAGGDVLAILLFAAIGRFSHGFPVFEAETLRTADPFIAGWFLSAYFLGGY 170
              KWG+VALLAGGDVLA+L+F+AIGRFSHGFPVF  +TL TADPFIAGWFLSAYFLGGY
Sbjct: 104 NITKWGRVALLAGGDVLALLIFSAIGRFSHGFPVFSLDTLHTADPFIAGWFLSAYFLGGY 163

Query: 171 SEDGRGMNGSSKAVAAAAKSWALGIPMGLGVRTLTSAHLPPINFILVTLGSTAVLLIGWR 230
           +E+GRGM G SKAV AAAKSW +G P+G+ +R+ +S H+P  +F+LVT+GSTAVLLIGWR
Sbjct: 164 AEEGRGMKGKSKAVVAAAKSWIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWR 223

Query: 231 TLLFQILPSGKSKKDDMYKRGSPFELFEVSNALLHK 265
            LLF +LP+   KKDD Y++GS FELFE+  +L+ +
Sbjct: 224 ALLFSVLPTESKKKDDTYRKGSAFELFELLTSLIRR 257

The following BLAST results are available for this feature:

BLAST of Spo17828.1 vs. NCBI nr
BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
BLAST of Spo17828.1 vs. ExPASy Swiss-Prot
BLAST of Spo17828.1 vs. TAIR (Arabidopsis)

BLAST of Spo17828.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731314627\|ref\|XP_010687615.1\|	2.1e-102	76.6	PREDICTED: uncharacterized pro...	[more]
gi\|902188336\|gb\|KNA11111.1\|	2.8e-99	100.	hypothetical protein SOVF_1379...	[more]
gi\|702360778\|ref\|XP_010059817.1\|	5.5e-79	60.8	PREDICTED: uncharacterized pro...	[more]
gi\|645227205\|ref\|XP_008220404.1\|	6.1e-78	61.0	PREDICTED: uncharacterized pro...	[more]
gi\|596159324\|ref\|XP_007222898.1\|	1.4e-77	61.0	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo17828.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8D4J5_BETVU	1.5e-102	76.6	Uncharacterized protein OS=Bet...	[more]
A0A0K9QX90_SPIOL	2.0e-99	100.	Uncharacterized protein OS=Spi...	[more]
M5XDA7_PRUPE	9.5e-78	61.0	Uncharacterized protein OS=Pru...	[more]
B9R6V7_RICCO	4.7e-77	58.5	Putative uncharacterized prote...	[more]
W9ST75_9ROSA	4.0e-76	60.9	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo17828.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17828.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G44920.1	6.3e-73	63.8	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021414	Protein of unknown function DUF3054	PFAM	PF11255	DUF3054	coord: 121..230 score: 5.6
None	No IPR available	PANTHER	PTHR35283	FAMILY NOT NAMED	coord: 18..265 score: 1.7E
None	No IPR available	PANTHER	PTHR35283:SF2	SUBFAMILY NOT NAMED	coord: 18..265 score: 1.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0030091	protein repair
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0009657	plastid organization
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0006508	proteolysis
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0006412	translation
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009965	leaf morphogenesis
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0044464	cell part
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009536	plastid
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0008430	selenium binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0003743	translation initiation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12370	0.75	Barchart \| Table
Spo04653	0.74	Barchart \| Table
Spo21660	0.73	Barchart \| Table
Spo23384	0.73	Barchart \| Table
Spo09769	0.73	Barchart \| Table
Spo12302	0.72	Barchart \| Table
Spo17578	0.70	Barchart \| Table
Spo09149	0.70	Barchart \| Table
Spo09335	0.70	Barchart \| Table
Spo09428	0.70	Barchart \| Table
Spo23531	0.69	Barchart \| Table
Spo18828	0.69	Barchart \| Table
Spo26911	0.69	Barchart \| Table
Spo26006	0.68	Barchart \| Table
Spo17612	0.68	Barchart \| Table
Spo20849	0.68	Barchart \| Table
Spo17161	0.68	Barchart \| Table
Spo22811	0.68	Barchart \| Table
Spo13193	0.68	Barchart \| Table
Spo25817	0.67	Barchart \| Table
Spo01305	0.67	Barchart \| Table
Spo13180	0.67	Barchart \| Table
Spo13691	0.67	Barchart \| Table
Spo00498	0.67	Barchart \| Table
Spo16996	0.67	Barchart \| Table
Spo20869	0.67	Barchart \| Table
Spo21446	0.66	Barchart \| Table
Spo20544	0.66	Barchart \| Table
Spo09554	0.66	Barchart \| Table
Spo03757	0.66	Barchart \| Table
Spo01954	0.66	Barchart \| Table
Spo27081	0.65	Barchart \| Table
Spo16293	0.65	Barchart \| Table
Spo00256	0.65	Barchart \| Table