Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACGGCGCAAATAGTTCATACTTGATATCTCTCTAACAAAAACCGCGTCAATTATGTTCAGTCCCACCACCTCCGAATCCTCTCTATATAATCCTACCACCCCCACCTCCCACTCTCCCCAAACAACCCAAAAATCTCCCTACACTACGCTCCATTCCCACTCCCATACCTTCATTTCCTCCCGCAATCCTCGCCTTTCAAAAAATAAAAATAAAAATAAATAAAATTAATTAATACTCAGCTCCCTCGTTCTTTTTGTTCTAGTGCGAGTGTACCAGCTGACTCGAGCTGAATCCATAAGCACTCGATCTAATGGGTAACGGAAAAACCTTGATAGTGTCATCAGTAAAAATCATTCTTATGTCAACTGGAGTCCTCTCCATTTCCATCCTCCTCTTTATGTCCATGCCAACTTTCTTTTCTTCCGCCACCGCAACCGCCACCGTCGACCTTCCGTCTTTTGTTTCCACCCTCCGCTCTTGGCTCCGTCCACCTTATCTTTACTTCATCATTAACGCTATCATTTTAGCCATCGTAGCCACCTCCCGCCTCCACCACAACCACCATACAAACCACCATGAGGTCCATCACGCGCCACCGCCTGCTTTCAAGTTGCCGAATCAGCCACAACATCATCATGAGATTCATGATGTTATCTCGGTACGTGCTGATCATCAATTCTCCCCATACGGCGGCGGTGTTGTTTCCGTTGCGGAAGTTGTTGTTGATAATGTTGTTGGAGCTGCTTTCTACAACGACGTCGTTTCGGTGAAGGACGTTGAGGTTGTTGAGAGGGTGGTGGAGAGAGAGAAAAGAGTTGTTGAGGAGGATGTTGTTATCAAAGGAACAAGGGTAGAAGAAGAAGAGGAATCCATGGTTGTCAAACGATCCACGTGGACTCCTCCGCCGTCGCTGACTCCGCAATTGAAAAGGCAGGTGAAATTTTCACCGGAGCTTTTGTCGGAGAAACCGCCGGCTTCTTCTAGATTTGGTCAGCATCGTCGCCCTGCTAAAGCTAAACCCTCTCTTGCCGAAGGTAACCAATTACTCCGTAAATTACTTGCCAATTGTTACATTGTCCTAACCTCTAAATAAAGCCCGACCCACTAATTTAGAGCTCATTTGGTGTCATCTTTAATTTTCAATTTTTGAAAATCATATGTTTTGTTTTTTGTTTTTTTTGTGGGAATAAGCCATAAATGGCAATATAAATTACAAATGAAATCGGGAGAAATTGAACTTGAGACCTATTGTACATATGCCCTCACTCTTAACCACTCGATCATGACCTCATTGATATATGTTTATCTTAAATCATAAACTTAGTAATCATACTCATAGTAATCATGTTAATTTTAAAATCTGATAACATGGTTTTCATATTTTCATATTTTAATTTTATATCAAACATAAAACTAAAAATAAAAAATAAAGTAGAACACGCCCTTGAAATTTTTTAACATGATTTTGTTATTTTTTTTTAAAGCACTCATTATTATGTTTATTTTATTACATATCATGAACTAGCCATCATTGGATTTATAAAATGACAATATCTAATCATAAACAATTATTACATTGCATCAAAGAGTAACCATTCTTATGCGAAAATGTGAAAATATTTCTAAACATCTTAAAAATAGTGTTACGTGTACCATGGACTTCGTACATGTTACTTTATTTTACGCCGTACTCGTTAAGAAAAACGGAGAGATTATAATTATTAATTAAGATATTTTATGTTAGTGAGATTGATTGAAGTGGGGGTGTCAATTAGTTGAGATCTAGGAGTAATTAGGATGTTGCGTTGTGTCACTTGTGTGTGTGACGTTTGACCAAAAATTAAATAAAGGTTAAATTTGTACTTTAACTTGCTGGAATCTTCAAGTAACTTAAACTTTAAACTACAAAGCGTACAACAATGAAGTGGCTTTACTGTAGTGGTCGATAGTGAGAAAGATTACAAGATCTAATGAAGCCGTTAGGAAAGTTGACCTTGACTAACTACTTTTCCACACTTTTTTTAAAAAAAATAATATAATTTTCTAATTTCTTTTTTGGTACGAATGACTAAATGAGATACGAAGGCTATATAAGTTATAAATAGAGAAATCGTATATGATAACTACGGTACATTAACCATCAGTTTTAATTACTAGACTAATTAACTAGGACCTCATTAGTTAATTTTCTAATTTCTACTTTGGTGTGAAAACATTGAAGAATCGTATGTTGACTTTTTTATTACGTTATCAATTAAACAACGGTTAAGTGATTTAAGGTTATCATTTTATCTAAATTAATTACAACTGGTCGTCAGTGGTCGGTGCATGTAGTGTAAATGCAAATTATTAGAGTATGACACTTCATATATACGCCAAATCGTTTACATAAATTATACGTAGTAGTCATGTAAAGTTAATTAGTCAATAAATGGTTTGTCTATACTCATAATTCTCATAAGAAAAATATACTTGTAAGGTTTAAGATTTCAGCCACTTAAAATTGAAGAAACTATAGTTTTGACAATTTGGATATAAGTGTTAATTAAATCTAAGGTAAAAAGTTAAAGTACGACTAAATTTAACGTTCAGTTATGCACTTTTAAAGGTAGCAAGCTCTTTAGTACGTTCAAATCAGATAATTTTTCCCTTTTTCTATACTTATTTTATTTGGATTTATTTGAATTTAACTAACTTTATCTGAATTTGACAAAATTTATTTTAGTTACAAATTTTATTGACCAACTCTTATTTTTCTGAATTTATCTTAACTGAACTTAATGAACTTATTTTTTCAGAATTAAGTTGAAATAAAGTGAATGAAACAGATAAGAAGATCGAACTATGGACGTTTAATTTAAATGTTGTCATTGTATGGTCCAAAAATTATATTTTCATATATGTAAACAAAAACATTTGTTTTATGATAATATATGAAACGTCCATTTTATTTTCATATGATAGGTGGGAAGTCATTGAAAGTATCCAAGCCAAAGAAACATGATACCTTAGAAAGCACTTGGAAGGCCATAACTGAAGGACGACACATCCCTTTAACAAGGCACCTGAAGAAGTCGGACACGTGGGAGAATCAGGACCGTCAAATCGACTTGCTCGACGACTCTTTTCCACTCCCGGCGGTGGTGAAGAAGTCAGAGACGTTTCATGAACGGACCAATTACTTACCGCCACCACCACCGCCGCCGGCGTCATTTGTTACCAAGCTGAAGAAGGAGCCATCACTAGGTCAGGACGAGTTGAATCGCCGAGTTGAAGCGTTCATTAACAAGTTTAATGATGAGATGAGGTTGCAGAGGCAAGAATCCATGCAACAATTTATGGAGATGATTAATCGCGCTGCTTAATATATTAAATTTATTAATTTGATCTTAATTTCTCAAAATAAAATTAGGATCGGAGTCTTAATTAATTATTGTAATGTTGTGTACATTACTAATCTTATAGGGTTTGTATTTTTTATTTTATTTTTGTCATTTATTTAGTTTGCTAAACACAAACCTAGCTTACTATAAACAAATACAGGAACTATAAACAAATACAGGAAAAAGAGAGAAGAAAATTCTATGTACATACTCGTATAATACTACGTAGTACAAGTAGAAGCTACGGAGTATATGATGTATTCTTAGCTTTTCTTTTACTTTTTTTTTCTTTCTTTTTGCATGAAAAAAGGACTAGCACCTTGTAACGTAATTTTTCTTTCATGTTGGACAGTTGGAATACTGAAATACAAGTATAGTTTTTCTTCTTTTGTAAGTTTTTTTTGTGAGTAATTCTTTTTACATTTTATGTTTTCTTTATACTCTGAATAACTAGCTTCATATATT AACGGCGCAAATAGTTCATACTTGATATCTCTCTAACAAAAACCGCGTCAATTATGTTCAGTCCCACCACCTCCGAATCCTCTCTATATAATCCTACCACCCCCACCTCCCACTCTCCCCAAACAACCCAAAAATCTCCCTACACTACGCTCCATTCCCACTCCCATACCTTCATTTCCTCCCGCAATCCTCGCCTTTCAAAAAATAAAAATAAAAATAAATAAAATTAATTAATACTCAGCTCCCTCGTTCTTTTTGTTCTAGTGCGAGTGTACCAGCTGACTCGAGCTGAATCCATAAGCACTCGATCTAATGGGTAACGGAAAAACCTTGATAGTGTCATCAGTAAAAATCATTCTTATGTCAACTGGAGTCCTCTCCATTTCCATCCTCCTCTTTATGTCCATGCCAACTTTCTTTTCTTCCGCCACCGCAACCGCCACCGTCGACCTTCCGTCTTTTGTTTCCACCCTCCGCTCTTGGCTCCGTCCACCTTATCTTTACTTCATCATTAACGCTATCATTTTAGCCATCGTAGCCACCTCCCGCCTCCACCACAACCACCATACAAACCACCATGAGGTCCATCACGCGCCACCGCCTGCTTTCAAGTTGCCGAATCAGCCACAACATCATCATGAGATTCATGATGTTATCTCGGTACGTGCTGATCATCAATTCTCCCCATACGGCGGCGGTGTTGTTTCCGTTGCGGAAGTTGTTGTTGATAATGTTGTTGGAGCTGCTTTCTACAACGACGTCGTTTCGGTGAAGGACGTTGAGGTTGTTGAGAGGGTGGTGGAGAGAGAGAAAAGAGTTGTTGAGGAGGATGTTGTTATCAAAGGAACAAGGGTAGAAGAAGAAGAGGAATCCATGGTTGTCAAACGATCCACGTGGACTCCTCCGCCGTCGCTGACTCCGCAATTGAAAAGGCAGGTGAAATTTTCACCGGAGCTTTTGTCGGAGAAACCGCCGGCTTCTTCTAGATTTGGTCAGCATCGTCGCCCTGCTAAAGCTAAACCCTCTCTTGCCGAAGGTGGGAAGTCATTGAAAGTATCCAAGCCAAAGAAACATGATACCTTAGAAAGCACTTGGAAGGCCATAACTGAAGGACGACACATCCCTTTAACAAGGCACCTGAAGAAGTCGGACACGTGGGAGAATCAGGACCGTCAAATCGACTTGCTCGACGACTCTTTTCCACTCCCGGCGGTGGTGAAGAAGTCAGAGACGTTTCATGAACGGACCAATTACTTACCGCCACCACCACCGCCGCCGGCGTCATTTGTTACCAAGCTGAAGAAGGAGCCATCACTAGGTCAGGACGAGTTGAATCGCCGAGTTGAAGCGTTCATTAACAAGTTTAATGATGAGATGAGGTTGCAGAGGCAAGAATCCATGCAACAATTTATGGAGATGATTAATCGCGCTGCTTAATATATTAAATTTATTAATTTGATCTTAATTTCTCAAAATAAAATTAGGATCGGAGTCTTAATTAATTATTGTAATGTTGTGTACATTACTAATCTTATAGGGTTTGTATTTTTTATTTTATTTTTGTCATTTATTTAGTTTGCTAAACACAAACCTAGCTTACTATAAACAAATACAGGAACTATAAACAAATACAGGAAAAAGAGAGAAGAAAATTCTATGTACATACTCGTATAATACTACGTAGTACAAGTAGAAGCTACGGAGTATATGATGTATTCTTAGCTTTTCTTTTACTTTTTTTTTCTTTCTTTTTGCATGAAAAAAGGACTAGCACCTTGTAACGTAATTTTTCTTTCATGTTGGACAGTTGGAATACTGAAATACAAGTATAGTTTTTCTTCTTTTGTAAGTTTTTTTTGTGAGTAATTCTTTTTACATTTTATGTTTTCTTTATACTCTGAATAACTAGCTTCATATATT ATGGGTAACGGAAAAACCTTGATAGTGTCATCAGTAAAAATCATTCTTATGTCAACTGGAGTCCTCTCCATTTCCATCCTCCTCTTTATGTCCATGCCAACTTTCTTTTCTTCCGCCACCGCAACCGCCACCGTCGACCTTCCGTCTTTTGTTTCCACCCTCCGCTCTTGGCTCCGTCCACCTTATCTTTACTTCATCATTAACGCTATCATTTTAGCCATCGTAGCCACCTCCCGCCTCCACCACAACCACCATACAAACCACCATGAGGTCCATCACGCGCCACCGCCTGCTTTCAAGTTGCCGAATCAGCCACAACATCATCATGAGATTCATGATGTTATCTCGGTACGTGCTGATCATCAATTCTCCCCATACGGCGGCGGTGTTGTTTCCGTTGCGGAAGTTGTTGTTGATAATGTTGTTGGAGCTGCTTTCTACAACGACGTCGTTTCGGTGAAGGACGTTGAGGTTGTTGAGAGGGTGGTGGAGAGAGAGAAAAGAGTTGTTGAGGAGGATGTTGTTATCAAAGGAACAAGGGTAGAAGAAGAAGAGGAATCCATGGTTGTCAAACGATCCACGTGGACTCCTCCGCCGTCGCTGACTCCGCAATTGAAAAGGCAGGTGAAATTTTCACCGGAGCTTTTGTCGGAGAAACCGCCGGCTTCTTCTAGATTTGGTCAGCATCGTCGCCCTGCTAAAGCTAAACCCTCTCTTGCCGAAGGTGGGAAGTCATTGAAAGTATCCAAGCCAAAGAAACATGATACCTTAGAAAGCACTTGGAAGGCCATAACTGAAGGACGACACATCCCTTTAACAAGGCACCTGAAGAAGTCGGACACGTGGGAGAATCAGGACCGTCAAATCGACTTGCTCGACGACTCTTTTCCACTCCCGGCGGTGGTGAAGAAGTCAGAGACGTTTCATGAACGGACCAATTACTTACCGCCACCACCACCGCCGCCGGCGTCATTTGTTACCAAGCTGAAGAAGGAGCCATCACTAGGTCAGGACGAGTTGAATCGCCGAGTTGAAGCGTTCATTAACAAGTTTAATGATGAGATGAGGTTGCAGAGGCAAGAATCCATGCAACAATTTATGGAGATGATTAATCGCGCTGCTTAA MGNGKTLIVSSVKIILMSTGVLSISILLFMSMPTFFSSATATATVDLPSFVSTLRSWLRPPYLYFIINAIILAIVATSRLHHNHHTNHHEVHHAPPPAFKLPNQPQHHHEIHDVISVRADHQFSPYGGGVVSVAEVVVDNVVGAAFYNDVVSVKDVEVVERVVEREKRVVEEDVVIKGTRVEEEEESMVVKRSTWTPPPSLTPQLKRQVKFSPELLSEKPPASSRFGQHRRPAKAKPSLAEGGKSLKVSKPKKHDTLESTWKAITEGRHIPLTRHLKKSDTWENQDRQIDLLDDSFPLPAVVKKSETFHERTNYLPPPPPPPASFVTKLKKEPSLGQDELNRRVEAFINKFNDEMRLQRQESMQQFMEMINRAA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17799.1 vs. NCBI nr
Match: gi|902117072|gb|KNA03933.1| (hypothetical protein SOVF_204480, partial [Spinacia oleracea]) HSP 1 Score: 423.3 bits (1087), Expect = 4.400e-115 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Spo17799.1 vs. NCBI nr
Match: gi|731369606|ref|XP_010696611.1| (PREDICTED: uncharacterized protein LOC104909111 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 386.3 bits (991), Expect = 5.900e-104 Identity = 241/391 (61.64%), Postives = 276/391 (70.59%), Query Frame = 1
BLAST of Spo17799.1 vs. NCBI nr
Match: gi|870843654|gb|KMS96794.1| (hypothetical protein BVRB_8g199770 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 382.1 bits (980), Expect = 1.100e-102 Identity = 236/381 (61.94%), Postives = 269/381 (70.60%), Query Frame = 1
BLAST of Spo17799.1 vs. NCBI nr
Match: gi|902038916|gb|KNA02745.1| (hypothetical protein SOVF_215780 [Spinacia oleracea]) HSP 1 Score: 268.5 bits (685), Expect = 1.800e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Spo17799.1 vs. NCBI nr
Match: gi|255560836|ref|XP_002521431.1| (PREDICTED: uncharacterized protein LOC8281755 [Ricinus communis]) HSP 1 Score: 237.3 bits (604), Expect = 4.400e-59 Identity = 164/370 (44.32%), Postives = 226/370 (61.08%), Query Frame = 1
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QB60_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_204480 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 3.000e-115 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6A6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199770 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 7.800e-103 Identity = 236/381 (61.94%), Postives = 269/381 (70.60%), Query Frame = 1
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6R5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_215780 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.200e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Match: B9S612_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1063000 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 3.100e-59 Identity = 164/370 (44.32%), Postives = 226/370 (61.08%), Query Frame = 1
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Match: A0A067JAV2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21368 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 5.300e-59 Identity = 164/370 (44.32%), Postives = 225/370 (60.81%), Query Frame = 1
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Match: AT1G61260.1 (Protein of unknown function (DUF761)) HSP 1 Score: 161.8 bits (408), Expect = 8.300e-40 Identity = 132/368 (35.87%), Postives = 204/368 (55.43%), Query Frame = 1
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Match: AT5G54300.1 (Protein of unknown function (DUF761)) HSP 1 Score: 124.0 bits (310), Expect = 1.900e-28 Identity = 125/363 (34.44%), Postives = 175/363 (48.21%), Query Frame = 1
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Match: AT1G11210.1 (Protein of unknown function (DUF761)) HSP 1 Score: 103.2 bits (256), Expect = 3.500e-22 Identity = 104/351 (29.63%), Postives = 158/351 (45.01%), Query Frame = 1
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Match: AT1G11220.1 (Protein of unknown function (DUF761)) HSP 1 Score: 94.4 bits (233), Expect = 1.600e-19 Identity = 110/361 (30.47%), Postives = 167/361 (46.26%), Query Frame = 1
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Match: AT4G04990.1 (Protein of unknown function (DUF761)) HSP 1 Score: 53.5 bits (127), Expect = 3.200e-7 Identity = 26/39 (66.67%), Postives = 34/39 (87.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17799.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17799.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17799.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17799.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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