Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAAGAAGAAAAGCTCATGCGAGGCGGCGGCCCGCCGAGCGTGGCGGCGGCTCCGTATAACATTGCTATGGGCTAGACAAGGCGGGTTGCTAAAATGCCGGTTAATGGCCGAGTTAAGGCACATGCCTAAACAACTCAAAGGCCATTACAAGAAGTCTAATAAGGATATGATCCAGTACGGTGAACGTCAGCTTTCGTTTGACGAAACACCAACGATACACTTTAGGATGCACCGGCCGTCCTCGTTGAGGTTCATGATTCCGTGTATTACGCCCGAAGTGAAGGATTTCGATTACGATTTTGCGAATGACGGTTGTGATGATTATGATGATGTTAAGTATAATGGGGTTTGTGGTGCAAGGAGGAGTTTTTTGAGGGGTAATAATGCAGAAGATTGTGAAGAAGATGATAATGGAGAATGTGAAGAAGCTGTTGTTTATGGAGATTCCGGGATTGACGACAAGGCGGACGAGTTCATTGCTAAGTTCTATGAGCAGATGAAGTTGCAAAGACAGATTTCCTATCAACAAAGGCATAATGCCATTAAAGCACTTTGA ATGGGTAAGAAGAAAAGCTCATGCGAGGCGGCGGCCCGCCGAGCGTGGCGGCGGCTCCGTATAACATTGCTATGGGCTAGACAAGGCGGGTTGCTAAAATGCCGGTTAATGGCCGAGTTAAGGCACATGCCTAAACAACTCAAAGGCCATTACAAGAAGTCTAATAAGGATATGATCCAGTACGGTGAACGTCAGCTTTCGTTTGACGAAACACCAACGATACACTTTAGGATGCACCGGCCGTCCTCGTTGAGGTTCATGATTCCGTGTATTACGCCCGAAGTGAAGGATTTCGATTACGATTTTGCGAATGACGGTTGTGATGATTATGATGATGTTAAGTATAATGGGGTTTGTGGTGCAAGGAGGAGTTTTTTGAGGGGTAATAATGCAGAAGATTGTGAAGAAGATGATAATGGAGAATGTGAAGAAGCTGTTGTTTATGGAGATTCCGGGATTGACGACAAGGCGGACGAGTTCATTGCTAAGTTCTATGAGCAGATGAAGTTGCAAAGACAGATTTCCTATCAACAAAGGCATAATGCCATTAAAGCACTTTGA ATGGGTAAGAAGAAAAGCTCATGCGAGGCGGCGGCCCGCCGAGCGTGGCGGCGGCTCCGTATAACATTGCTATGGGCTAGACAAGGCGGGTTGCTAAAATGCCGGTTAATGGCCGAGTTAAGGCACATGCCTAAACAACTCAAAGGCCATTACAAGAAGTCTAATAAGGATATGATCCAGTACGGTGAACGTCAGCTTTCGTTTGACGAAACACCAACGATACACTTTAGGATGCACCGGCCGTCCTCGTTGAGGTTCATGATTCCGTGTATTACGCCCGAAGTGAAGGATTTCGATTACGATTTTGCGAATGACGGTTGTGATGATTATGATGATGTTAAGTATAATGGGGTTTGTGGTGCAAGGAGGAGTTTTTTGAGGGGTAATAATGCAGAAGATTGTGAAGAAGATGATAATGGAGAATGTGAAGAAGCTGTTGTTTATGGAGATTCCGGGATTGACGACAAGGCGGACGAGTTCATTGCTAAGTTCTATGAGCAGATGAAGTTGCAAAGACAGATTTCCTATCAACAAAGGCATAATGCCATTAAAGCACTTTGA MGKKKSSCEAAARRAWRRLRITLLWARQGGLLKCRLMAELRHMPKQLKGHYKKSNKDMIQYGERQLSFDETPTIHFRMHRPSSLRFMIPCITPEVKDFDYDFANDGCDDYDDVKYNGVCGARRSFLRGNNAEDCEEDDNGECEEAVVYGDSGIDDKADEFIAKFYEQMKLQRQISYQQRHNAIKAL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17725.1 vs. NCBI nr
Match: gi|902116960|gb|KNA03927.1| (hypothetical protein SOVF_204500 [Spinacia oleracea]) HSP 1 Score: 383.6 bits (984), Expect = 1.900e-103 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Spo17725.1 vs. NCBI nr
Match: gi|731336589|ref|XP_010679344.1| (PREDICTED: uncharacterized protein LOC104894736 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 251.1 bits (640), Expect = 1.500e-63 Identity = 133/183 (72.68%), Postives = 148/183 (80.87%), Query Frame = 1
BLAST of Spo17725.1 vs. NCBI nr
Match: gi|1021037284|gb|KZM95067.1| (hypothetical protein DCAR_018309 [Daucus carota subsp. sativus]) HSP 1 Score: 160.2 bits (404), Expect = 3.400e-36 Identity = 99/176 (56.25%), Postives = 118/176 (67.05%), Query Frame = 1
BLAST of Spo17725.1 vs. NCBI nr
Match: gi|590719459|ref|XP_007051060.1| (Uncharacterized protein TCM_004768 [Theobroma cacao]) HSP 1 Score: 159.8 bits (403), Expect = 4.500e-36 Identity = 95/184 (51.63%), Postives = 124/184 (67.39%), Query Frame = 1
BLAST of Spo17725.1 vs. NCBI nr
Match: gi|802689392|ref|XP_012082856.1| (PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]) HSP 1 Score: 155.6 bits (392), Expect = 8.400e-35 Identity = 92/183 (50.27%), Postives = 113/183 (61.75%), Query Frame = 1
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9F9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_204500 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.300e-103 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCJ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121460 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.000e-63 Identity = 133/183 (72.68%), Postives = 148/183 (80.87%), Query Frame = 1
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Match: A0A164YYR2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018309 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.400e-36 Identity = 99/176 (56.25%), Postives = 118/176 (67.05%), Query Frame = 1
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Match: A0A061DS51_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004768 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.100e-36 Identity = 95/184 (51.63%), Postives = 124/184 (67.39%), Query Frame = 1
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Match: A0A067JZP3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13999 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.900e-35 Identity = 92/183 (50.27%), Postives = 113/183 (61.75%), Query Frame = 1
BLAST of Spo17725.1 vs. TAIR (Arabidopsis)
Match: AT5G38700.1 (unknown protein) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-33 Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 1
BLAST of Spo17725.1 vs. TAIR (Arabidopsis)
Match: AT4G02170.1 (unknown protein) HSP 1 Score: 105.9 bits (263), Expect = 2.700e-23 Identity = 77/189 (40.74%), Postives = 105/189 (55.56%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17725.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17725.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17725.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17725.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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