Spo17478 (gene) | SpinachBase

Overview


Name	Spo17478
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Kelch repeat-containing F-box family protein
Location	chr6 : 45778341 .. 45779549 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGAAAAAGCCCAAAGCACTCCTCCCATGGATCCCCCCACCACCATCACCACCACCATCACCGCCGTCTTGACCACCGTGACCACAACCAAGAAGAAAATAAGCAACAACAACAACTAATACCAGGATTACCAAATCACATAGCACACTTGATCCTCACCAAAATCCCACCTTCAATTCTTTACTCTGTTTCTATTTCATGGCGTAAATTTATAAATTCTCCTCTTTTCCCTCCATTTTTATCTCTCTACACTCTCCTAATTCCAAATAATATCATAAAAGATTCACCCAATTCAATTCCAATTCCACAACAATTTCTCACTCCAATTTCCTTTTTTAGCTTTGATCCTATTTCGTGTCAATGGCGGCAACTTCCTCTTCCGCCGCCGTTATCGCTTCTTTTACGCCACCCGCCTTTTATCTCACGCGACCTCCCTGTTCAGTCTGTCACGGTGGGTGACAGGCTGGCAGTGGTGGCGGGGACGACGCAGGATCTTGCTCCGGCTTTGTCTCGTCCCCTGGTGTTCGACCCACTCGCACGTGAGTGGCGGTATGGGCCGGGTTTACCGGTGCCCCGGAGGTGGTGTGCTGCCGGATCACTGGGTGAGTCCATTTACGTGGCGAGTGGGGTCGGGTCCCATTTCTCCACGGATACCGCCCGATCCGTGGAGAAATGGGACCTATCCGCCCATCCCGAAGACGGGTGGGAGAAAGTTAGTCCTCTTCGGGATGGGCGGTTTTCCCGGGAGGCGGCTGACGCCGTAGGGTGGCGCGGCCGCCTTTGCATGGTCAACGTCAAAGGCGACGCCGCCAAACAAGGTGCTGTATATGATGTAAAAGATGACGTGTGGTATGACATGAAGGAGGGGATGGTAGGTGGGTGGCGGGGCCCGGCGGCGGCGATGGATGAAGAGGTGATCTACATGGTGGAGGAATCTAAAGGGGTGGTGAAGAAGTATGTAGAAGAGAGTGATGGGTGGGTGGAGGTGGCGGAGAGTGAGAGACTACGTGGAGCTCAACAAATGGCGGCGCGTGGTGGGAGGCTTTGTATTGTTTGTAAAGGTGGGAGTGAGATTGTTGTGGTGGATGTAGTGGCGTCGCCGCCAAGAATGTGGGTGGTGGAGCCACCTAAAGGGTTTAATGTTGCTGCCGTACATGTTTTGCCAAGAATGAGTAGGGACCACTCGAGTTTGAACCTTCTATAA

mRNA sequence

ATGTCCAGAAAAAGCCCAAAGCACTCCTCCCATGGATCCCCCCACCACCATCACCACCACCATCACCGCCGTCTTGACCACCGTGACCACAACCAAGAAGAAAATAAGCAACAACAACAACTAATACCAGGATTACCAAATCACATAGCACACTTGATCCTCACCAAAATCCCACCTTCAATTCTTTACTCTGTTTCTATTTCATGGCGTAAATTTATAAATTCTCCTCTTTTCCCTCCATTTTTATCTCTCTACACTCTCCTAATTCCAAATAATATCATAAAAGATTCACCCAATTCAATTCCAATTCCACAACAATTTCTCACTCCAATTTCCTTTTTTAGCTTTGATCCTATTTCGTGTCAATGGCGGCAACTTCCTCTTCCGCCGCCGTTATCGCTTCTTTTACGCCACCCGCCTTTTATCTCACGCGACCTCCCTGTTCAGTCTGTCACGGTGGGTGACAGGCTGGCAGTGGTGGCGGGGACGACGCAGGATCTTGCTCCGGCTTTGTCTCGTCCCCTGGTGTTCGACCCACTCGCACGTGAGTGGCGGTATGGGCCGGGTTTACCGGTGCCCCGGAGGTGGTGTGCTGCCGGATCACTGGGTGAGTCCATTTACGTGGCGAGTGGGGTCGGGTCCCATTTCTCCACGGATACCGCCCGATCCGTGGAGAAATGGGACCTATCCGCCCATCCCGAAGACGGGTGGGAGAAAGTTAGTCCTCTTCGGGATGGGCGGTTTTCCCGGGAGGCGGCTGACGCCGTAGGGTGGCGCGGCCGCCTTTGCATGGTCAACGTCAAAGGCGACGCCGCCAAACAAGGTGCTGTATATGATGTAAAAGATGACGTGTGGTATGACATGAAGGAGGGGATGGTAGGTGGGTGGCGGGGCCCGGCGGCGGCGATGGATGAAGAGGTGATCTACATGGTGGAGGAATCTAAAGGGGTGGTGAAGAAGTATGTAGAAGAGAGTGATGGGTGGGTGGAGGTGGCGGAGAGTGAGAGACTACGTGGAGCTCAACAAATGGCGGCGCGTGGTGGGAGGCTTTGTATTGTTTGTAAAGGTGGGAGTGAGATTGTTGTGGTGGATGTAGTGGCGTCGCCGCCAAGAATGTGGGTGGTGGAGCCACCTAAAGGGTTTAATGTTGCTGCCGTACATGTTTTGCCAAGAATGAGTAGGGACCACTCGAGTTTGAACCTTCTATAA

Coding sequence (CDS)

ATGTCCAGAAAAAGCCCAAAGCACTCCTCCCATGGATCCCCCCACCACCATCACCACCACCATCACCGCCGTCTTGACCACCGTGACCACAACCAAGAAGAAAATAAGCAACAACAACAACTAATACCAGGATTACCAAATCACATAGCACACTTGATCCTCACCAAAATCCCACCTTCAATTCTTTACTCTGTTTCTATTTCATGGCGTAAATTTATAAATTCTCCTCTTTTCCCTCCATTTTTATCTCTCTACACTCTCCTAATTCCAAATAATATCATAAAAGATTCACCCAATTCAATTCCAATTCCACAACAATTTCTCACTCCAATTTCCTTTTTTAGCTTTGATCCTATTTCGTGTCAATGGCGGCAACTTCCTCTTCCGCCGCCGTTATCGCTTCTTTTACGCCACCCGCCTTTTATCTCACGCGACCTCCCTGTTCAGTCTGTCACGGTGGGTGACAGGCTGGCAGTGGTGGCGGGGACGACGCAGGATCTTGCTCCGGCTTTGTCTCGTCCCCTGGTGTTCGACCCACTCGCACGTGAGTGGCGGTATGGGCCGGGTTTACCGGTGCCCCGGAGGTGGTGTGCTGCCGGATCACTGGGTGAGTCCATTTACGTGGCGAGTGGGGTCGGGTCCCATTTCTCCACGGATACCGCCCGATCCGTGGAGAAATGGGACCTATCCGCCCATCCCGAAGACGGGTGGGAGAAAGTTAGTCCTCTTCGGGATGGGCGGTTTTCCCGGGAGGCGGCTGACGCCGTAGGGTGGCGCGGCCGCCTTTGCATGGTCAACGTCAAAGGCGACGCCGCCAAACAAGGTGCTGTATATGATGTAAAAGATGACGTGTGGTATGACATGAAGGAGGGGATGGTAGGTGGGTGGCGGGGCCCGGCGGCGGCGATGGATGAAGAGGTGATCTACATGGTGGAGGAATCTAAAGGGGTGGTGAAGAAGTATGTAGAAGAGAGTGATGGGTGGGTGGAGGTGGCGGAGAGTGAGAGACTACGTGGAGCTCAACAAATGGCGGCGCGTGGTGGGAGGCTTTGTATTGTTTGTAAAGGTGGGAGTGAGATTGTTGTGGTGGATGTAGTGGCGTCGCCGCCAAGAATGTGGGTGGTGGAGCCACCTAAAGGGTTTAATGTTGCTGCCGTACATGTTTTGCCAAGAATGAGTAGGGACCACTCGAGTTTGAACCTTCTATAA

Protein sequence

MSRKSPKHSSHGSPHHHHHHHHRRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKVSPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17478.1	Spo17478.1	mRNA

Homology

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BLAST of Spo17478.1 vs. NCBI nr
Match: gi|902177632|gb|KNA08979.1| (hypothetical protein SOVF_157790 [Spinacia oleracea])

HSP 1 Score: 802.7 bits (2072), Expect = 2.800e-229
Identity = 398/402 (99.00%), Postives = 398/402 (99.00%), Query Frame = 1


		  
Query: 1   MSRKSPKHSSHGSPHHHHHHHHRRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60
           MSRKSPKHSSHGSPHHHH    RRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS
Sbjct: 1   MSRKSPKHSSHGSPHHHH----RRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60

Query: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS 120
           ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS
Sbjct: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS 120

Query: 121 CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL 180
           CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL
Sbjct: 121 CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL 180

Query: 181 AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV 240
           AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV
Sbjct: 181 AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV 240

Query: 241 SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA 300
           SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA
Sbjct: 241 SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA 300

Query: 301 AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI 360
           AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI
Sbjct: 301 AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI 360

Query: 361 VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 403
           VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL
Sbjct: 361 VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 398

[Close]

BLAST of Spo17478.1 vs. NCBI nr
Match: gi|731333029|ref|XP_010677516.1| (PREDICTED: F-box/kelch-repeat protein SKIP25 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 583.6 bits (1503), Expect = 2.700e-163
Identity = 301/404 (74.50%), Postives = 341/404 (84.41%), Query Frame = 1


		  
Query: 1   MSRKSPKHSSHGSPHHHHHHHHRRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60
           MS KS K S HGSPHH+     R      + Q++ +QQQQLIPGLP+HIAHLIL+KIPPS
Sbjct: 1   MSTKSLKLSYHGSPHHNLQQEKRT---HINEQQQQQQQQQLIPGLPDHIAHLILSKIPPS 60

Query: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNN-IIKDSPNSIPIPQQFLTPISFFSFDPI 120
           ILYSVS SWRKFI SPLFPPF SL+TLLIPNN II  SP++   PQQFLTPISFFSFDPI
Sbjct: 61  ILYSVSPSWRKFIYSPLFPPFYSLFTLLIPNNVIINSSPSN---PQQFLTPISFFSFDPI 120

Query: 121 SCQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDP 180
           S QW  LP PPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPAL RPLVFDP
Sbjct: 121 SSQWHPLPPPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALPRPLVFDP 180

Query: 181 LAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPED-GWE 240
             R+W YGP LPVPRRWC AG+L  S+Y+ASGVG HFSTD ARSVEK D+S       W+
Sbjct: 181 RTRDWGYGPALPVPRRWCIAGALDGSLYMASGVGPHFSTDLARSVEKCDMSQSQLCWDWD 240

Query: 241 KVSPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRG 300
           KVS LRDGRFSREAADAVGW+G LCMVNVKGDAAKQGAVY  ++D W DMK+GMVGGWRG
Sbjct: 241 KVSCLRDGRFSREAADAVGWQGCLCMVNVKGDAAKQGAVYSAENDAWSDMKDGMVGGWRG 300

Query: 301 PAAAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGS 360
           PAA+M+E+VIY+V+ESKGVV+KY EE D WV+V ES++LRGAQQMAARGGRLC+VC+GG+
Sbjct: 301 PAASMNEQVIYVVDESKGVVRKYNEERDCWVDVLESDKLRGAQQMAARGGRLCVVCRGGT 360

Query: 361 EIVVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 403
           EIVVVDVV SPP++WVV PP+G+NVAAVH+LPR+S  +S+ NLL
Sbjct: 361 EIVVVDVVVSPPKIWVVVPPEGYNVAAVHILPRISGSYSNFNLL 398

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BLAST of Spo17478.1 vs. NCBI nr
Match: gi|661878556|emb|CDP17709.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 436.0 bits (1120), Expect = 7.000e-119
Identity = 221/399 (55.39%), Postives = 272/399 (68.17%), Query Frame = 1


		  
Query: 14  PHHHHHHHHRRLDHRDHNQEE---NKQQQQLIPGLPNHIAHLILTKIPPSILYSVSISWR 73
           P HHHHHHH+    ++  QEE     + Q L+PGLP+HIA L L+K+ PS+LYSV   WR
Sbjct: 24  PKHHHHHHHQTPQKQEQEQEELPETSEDQSLLPGLPDHIAQLCLSKVQPSLLYSVCWPWR 83

Query: 74  KFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPP 133
           + I SP FPPFLS+Y LLIP+    D         Q    I F  FDPIS  W  LP PP
Sbjct: 84  RLIYSPSFPPFLSIYALLIPSETTPD--------HQSHDSIKFSCFDPISSNWLSLPSPP 143

Query: 134 P---LSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYG 193
           P   L LLLRHP FISR LP+QSVTV  +L ++A T     PAL+ PL+F+PL++ W YG
Sbjct: 144 PDPLLCLLLRHPSFISRRLPIQSVTVSGKLVLLAATADQFQPALNSPLIFNPLSKTWTYG 203

Query: 194 PGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDG----------- 253
           P +  PRRWCAAG+    +Y+ASGVGSH++ D ARSVEKWDL  +  +            
Sbjct: 204 PPIAAPRRWCAAGASAGVVYMASGVGSHYNLDVARSVEKWDLLMNQNNSSINIKRDSQTA 263

Query: 254 ---WEKVSPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMV 313
              WEK+  LRDGRFSR+A DAVGW+G+LCMVNVKGDAAK+G +YD+K+D W +M EGM+
Sbjct: 264 NWRWEKMGGLRDGRFSRDAIDAVGWKGKLCMVNVKGDAAKEGIIYDMKNDAWEEMPEGML 323

Query: 314 GGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIV 373
            GWRGPAAAMDEE+IYMV ESKGV++ Y    D WV++ ES+ L+ AQ +AA GGR+CIV
Sbjct: 324 AGWRGPAAAMDEEIIYMVNESKGVLRMYDPLKDAWVQILESKMLQDAQYVAAAGGRVCIV 383

Query: 374 CKGGSEIVVVDVVASPPRMWVVEPPKGFNVAAVHVLPRM 393
              G EIVVVDVV SPPR WVV+ P  +   A+HVLPRM
Sbjct: 384 GGSGLEIVVVDVVVSPPRFWVVDTPPAYQAVAIHVLPRM 414

[Close]

BLAST of Spo17478.1 vs. NCBI nr
Match: gi|747040293|ref|XP_011074258.1| (PREDICTED: F-box/kelch-repeat protein SKIP25-like [Sesamum indicum])

HSP 1 Score: 426.8 bits (1096), Expect = 4.200e-116
Identity = 208/372 (55.91%), Postives = 262/372 (70.43%), Query Frame = 1


		  
Query: 28  RDHNQEENKQQQQLIPGLPNHIAHLILTKIPPSILYSVSISWRKFINSPLFPPFLSLYTL 87
           R H   E+ + Q L+PG+P+HIA L L+ +PPS+LYSV  SWR+ I SP FPPFLSLY L
Sbjct: 22  RHHLTTEDDRHQSLLPGIPDHIAQLCLSLVPPSLLYSVCHSWRRLIYSPSFPPFLSLYAL 81

Query: 88  LIPNNIIKDSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPP---PLSLLLRHPPFISR 147
                    SP            + F SFDPISC+W+ LP PP   PL  L RHP FI R
Sbjct: 82  F--------SPTDTESQPHLSNSVEFCSFDPISCKWQLLPAPPAAPPLRFLFRHPSFIPR 141

Query: 148 DLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGE 207
            LP+QSV     L V+A T  +  PALS+PLVF+ L+++W  GP LP PRRWCAAG+   
Sbjct: 142 KLPIQSVAASGNLVVLAATDDNFLPALSQPLVFNSLSKKWARGPPLPAPRRWCAAGTTRG 201

Query: 208 SIYVASGVGSHFSTDTARSVEKWDLSAHPEDGW--EKVSPLRDGRFSREAADAVGWRGRL 267
           ++YVASG+GSH++TD ARSVEKWDL+   + GW  EK+  L+DG+FSR+A +AVGWRG+L
Sbjct: 202 AVYVASGIGSHYNTDVARSVEKWDLTNQWQRGWIWEKMGKLKDGKFSRDAIEAVGWRGKL 261

Query: 268 CMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYV 327
           CMVNVKGDAAK+G +Y V+ D W +M EGM+ GWRGPAAAM+EE IY+V+ESKG +KKY 
Sbjct: 262 CMVNVKGDAAKEGIIYHVEKDSWEEMPEGMLAGWRGPAAAMEEETIYVVDESKGSLKKYD 321

Query: 328 EESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPP-RMWVVEPPKGF 387
              D WVE+ E+E L+GAQQ+ A GGR+C++C  G+ I VVDV + PP R WVV  P GF
Sbjct: 322 HVKDAWVEMVENEMLKGAQQVVAAGGRVCVLCADGARITVVDVASPPPARQWVVHVPSGF 381

Query: 388 NVAAVHVLPRMS 394
            V AVH+LPR+S
Sbjct: 382 QVVAVHILPRLS 385

[Close]

BLAST of Spo17478.1 vs. NCBI nr
Match: gi|645265200|ref|XP_008238037.1| (PREDICTED: F-box/kelch-repeat protein SKIP25 [Prunus mume])

HSP 1 Score: 423.7 bits (1088), Expect = 3.600e-115
Identity = 209/366 (57.10%), Postives = 264/366 (72.13%), Query Frame = 1


		  
Query: 39  QQLIPGLPNHIAHLILTKIPPSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSP 98
           Q L+PGLP+ +A + L+ + PS+L+SV  SWR+ I S  FPPFLSLY LL  ++    SP
Sbjct: 25  QPLLPGLPDDVAQVCLSLVHPSVLFSVCSSWRRLIYSSSFPPFLSLYALLTSSS----SP 84

Query: 99  NSIPIPQQFLTPISFFSFDPISCQWRQLPLPPP---LSLLLRHPPFISRDLPVQSVTVGD 158
           NSI           F+SFDP+S  W  LP  PP   L L LRHP FISR+LP+QSV+V  
Sbjct: 85  NSI----------QFYSFDPLSSNWHALPATPPDPPLRLFLRHPSFISRNLPIQSVSVSG 144

Query: 159 RLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSH 218
            L +VA TT +L PAL RPLVFDP+A++W +GP L  PRRWCAAG+LG  +YVASG+GSH
Sbjct: 145 NLVLVAATTSNLLPALPRPLVFDPVAKKWAFGPPLTTPRRWCAAGALGGRVYVASGIGSH 204

Query: 219 FSTDTARSVEKWDLSA---HPEDG----WEKVSPLRDGRFSREAADAVGWRGRLCMVNVK 278
           FS D ARSVEKWDL+    H  D     WEK   LRDGRFSR+A +AVGWRG+LCMVN+K
Sbjct: 205 FSIDVARSVEKWDLTKNKKHRNDHLGWEWEKARGLRDGRFSRDAIEAVGWRGKLCMVNLK 264

Query: 279 GDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDGW 338
           GDA ++G +YDV+ D W DM EGM+GGW+GP AAMDEEV+Y+V+E+KG +++Y  E D W
Sbjct: 265 GDAVQEGLMYDVEKDTWQDMPEGMIGGWKGPVAAMDEEVMYVVDEAKGALRRYDPEKDVW 324

Query: 339 VEVAESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNVAAVHV 395
           VE+ ESERL GA Q+A  GGR+C+VC+G  +I+VVDV A+PP  W V+ P G    A+H+
Sbjct: 325 VEILESERLIGADQIAGGGGRVCVVCRG--KILVVDVTAAPPSFWDVKTPLGLEAVAIHI 374

[Close]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNY4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_157790 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 2.000e-229
Identity = 398/402 (99.00%), Postives = 398/402 (99.00%), Query Frame = 1


		  
Query: 1   MSRKSPKHSSHGSPHHHHHHHHRRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60
           MSRKSPKHSSHGSPHHHH    RRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS
Sbjct: 1   MSRKSPKHSSHGSPHHHH----RRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60

Query: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS 120
           ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS
Sbjct: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPIS 120

Query: 121 CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL 180
           CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL
Sbjct: 121 CQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPL 180

Query: 181 AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV 240
           AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV
Sbjct: 181 AREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKV 240

Query: 241 SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA 300
           SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA
Sbjct: 241 SPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPA 300

Query: 301 AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI 360
           AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI
Sbjct: 301 AAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEI 360

Query: 361 VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 403
           VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL
Sbjct: 361 VVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 398

[Close]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F6E7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g108300 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 1.900e-163
Identity = 301/404 (74.50%), Postives = 341/404 (84.41%), Query Frame = 1


		  
Query: 1   MSRKSPKHSSHGSPHHHHHHHHRRLDHRDHNQEENKQQQQLIPGLPNHIAHLILTKIPPS 60
           MS KS K S HGSPHH+     R      + Q++ +QQQQLIPGLP+HIAHLIL+KIPPS
Sbjct: 1   MSTKSLKLSYHGSPHHNLQQEKRT---HINEQQQQQQQQQLIPGLPDHIAHLILSKIPPS 60

Query: 61  ILYSVSISWRKFINSPLFPPFLSLYTLLIPNN-IIKDSPNSIPIPQQFLTPISFFSFDPI 120
           ILYSVS SWRKFI SPLFPPF SL+TLLIPNN II  SP++   PQQFLTPISFFSFDPI
Sbjct: 61  ILYSVSPSWRKFIYSPLFPPFYSLFTLLIPNNVIINSSPSN---PQQFLTPISFFSFDPI 120

Query: 121 SCQWRQLPLPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDP 180
           S QW  LP PPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPAL RPLVFDP
Sbjct: 121 SSQWHPLPPPPPLSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALPRPLVFDP 180

Query: 181 LAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPED-GWE 240
             R+W YGP LPVPRRWC AG+L  S+Y+ASGVG HFSTD ARSVEK D+S       W+
Sbjct: 181 RTRDWGYGPALPVPRRWCIAGALDGSLYMASGVGPHFSTDLARSVEKCDMSQSQLCWDWD 240

Query: 241 KVSPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRG 300
           KVS LRDGRFSREAADAVGW+G LCMVNVKGDAAKQGAVY  ++D W DMK+GMVGGWRG
Sbjct: 241 KVSCLRDGRFSREAADAVGWQGCLCMVNVKGDAAKQGAVYSAENDAWSDMKDGMVGGWRG 300

Query: 301 PAAAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGS 360
           PAA+M+E+VIY+V+ESKGVV+KY EE D WV+V ES++LRGAQQMAARGGRLC+VC+GG+
Sbjct: 301 PAASMNEQVIYVVDESKGVVRKYNEERDCWVDVLESDKLRGAQQMAARGGRLCVVCRGGT 360

Query: 361 EIVVVDVVASPPRMWVVEPPKGFNVAAVHVLPRMSRDHSSLNLL 403
           EIVVVDVV SPP++WVV PP+G+NVAAVH+LPR+S  +S+ NLL
Sbjct: 361 EIVVVDVVVSPPKIWVVVPPEGYNVAAVHILPRISGSYSNFNLL 398

[Close]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Match: A0A068VAZ1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010287001 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 4.900e-119
Identity = 221/399 (55.39%), Postives = 272/399 (68.17%), Query Frame = 1


		  
Query: 14  PHHHHHHHHRRLDHRDHNQEE---NKQQQQLIPGLPNHIAHLILTKIPPSILYSVSISWR 73
           P HHHHHHH+    ++  QEE     + Q L+PGLP+HIA L L+K+ PS+LYSV   WR
Sbjct: 24  PKHHHHHHHQTPQKQEQEQEELPETSEDQSLLPGLPDHIAQLCLSKVQPSLLYSVCWPWR 83

Query: 74  KFINSPLFPPFLSLYTLLIPNNIIKDSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPP 133
           + I SP FPPFLS+Y LLIP+    D         Q    I F  FDPIS  W  LP PP
Sbjct: 84  RLIYSPSFPPFLSIYALLIPSETTPD--------HQSHDSIKFSCFDPISSNWLSLPSPP 143

Query: 134 P---LSLLLRHPPFISRDLPVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYG 193
           P   L LLLRHP FISR LP+QSVTV  +L ++A T     PAL+ PL+F+PL++ W YG
Sbjct: 144 PDPLLCLLLRHPSFISRRLPIQSVTVSGKLVLLAATADQFQPALNSPLIFNPLSKTWTYG 203

Query: 194 PGLPVPRRWCAAGSLGESIYVASGVGSHFSTDTARSVEKWDLSAHPEDG----------- 253
           P +  PRRWCAAG+    +Y+ASGVGSH++ D ARSVEKWDL  +  +            
Sbjct: 204 PPIAAPRRWCAAGASAGVVYMASGVGSHYNLDVARSVEKWDLLMNQNNSSINIKRDSQTA 263

Query: 254 ---WEKVSPLRDGRFSREAADAVGWRGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMV 313
              WEK+  LRDGRFSR+A DAVGW+G+LCMVNVKGDAAK+G +YD+K+D W +M EGM+
Sbjct: 264 NWRWEKMGGLRDGRFSRDAIDAVGWKGKLCMVNVKGDAAKEGIIYDMKNDAWEEMPEGML 323

Query: 314 GGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDGWVEVAESERLRGAQQMAARGGRLCIV 373
            GWRGPAAAMDEE+IYMV ESKGV++ Y    D WV++ ES+ L+ AQ +AA GGR+CIV
Sbjct: 324 AGWRGPAAAMDEEIIYMVNESKGVLRMYDPLKDAWVQILESKMLQDAQYVAAAGGRVCIV 383

Query: 374 CKGGSEIVVVDVVASPPRMWVVEPPKGFNVAAVHVLPRM 393
              G EIVVVDVV SPPR WVV+ P  +   A+HVLPRM
Sbjct: 384 GGSGLEIVVVDVVVSPPRFWVVDTPPAYQAVAIHVLPRM 414

[Close]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Match: B9HPR6_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0009s02891g PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.300e-115
Identity = 208/371 (56.06%), Postives = 262/371 (70.62%), Query Frame = 1


		  
Query: 38  QQQLIPGLPNHIAHLILTKIPPSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDS 97
           +Q LIPGLPN IA L L+ + PS LYSV  SWR+ I SP FPPF SLY +L   N   + 
Sbjct: 32  EQPLIPGLPNDIAQLCLSLVHPSTLYSVCHSWRRLIYSPSFPPFFSLYAVLSSTNTNHNL 91

Query: 98  PNSIPIPQQFLTPISFFSFDPISCQWRQLPLPPP---LSLLLRHPPFISRDLPVQSVTVG 157
           P++          I FF+FDPIS +W  LP PPP   L L+LRHP FISRDLP+QS++  
Sbjct: 92  PDN--------NSIQFFNFDPISSRWDSLPPPPPDPPLHLILRHPSFISRDLPIQSISAS 151

Query: 158 DRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGS 217
            RL ++A T+   +PALSRPLVF+PL+  W +GP L  PRRWCAAGS   ++YVASG+GS
Sbjct: 152 YRLILLAATSHSFSPALSRPLVFNPLSGSWAFGPPLATPRRWCAAGSAHGTVYVASGIGS 211

Query: 218 HFSTDTARSVEKWDLSAHPED-----------GWEKVSPLRDGRFSREAADAVGWRGRLC 277
            ++TD A+S+EKWDL                  W KV  L++GRFSR+A DAVGWRG+LC
Sbjct: 212 QYNTDVAKSLEKWDLQNQKAMISNIRNKTTTWKWVKVKELKNGRFSRDAIDAVGWRGKLC 271

Query: 278 MVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVE 337
           MVN+KGDAAK+G VYD + D W DM +GMV GWRGP AAMDEEV+Y+V+E+KGV++KY  
Sbjct: 272 MVNMKGDAAKEGIVYDTEKDTWEDMPQGMVAGWRGPVAAMDEEVMYVVDEAKGVLRKYDP 331

Query: 338 ESDGWVEVAESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNV 395
           E D W  + ESERL GAQQ+AA GGR+C++C G +E+VV+DVVA P R+WVVE P GF  
Sbjct: 332 ERDCWERIMESERLIGAQQIAAGGGRVCVICGGSTELVVLDVVALPVRLWVVETPPGFEA 391

[Close]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Match: M5WZH1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020135mg PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.300e-115
Identity = 210/365 (57.53%), Postives = 264/365 (72.33%), Query Frame = 1


		  
Query: 39  QQLIPGLPNHIAHLILTKIPPSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIKDSP 98
           Q L+PGLP+ IA + L+ + PS+L+SV  SWR+ I S  FPPFLSLY LL  ++    SP
Sbjct: 25  QPLLPGLPDDIAQVCLSLVHPSVLFSVCTSWRRLIYSSSFPPFLSLYALLTSSS----SP 84

Query: 99  NSIPIPQQFLTPISFFSFDPISCQWRQLPLPPP---LSLLLRHPPFISRDLPVQSVTVGD 158
           NSI           F+SFDP+S  W  LP  PP   L L LRHP FISR+LP+QSV+V  
Sbjct: 85  NSI----------QFYSFDPLSSNWHALPATPPDPPLRLFLRHPSFISRNLPIQSVSVSG 144

Query: 159 RLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASGVGSH 218
            L +VA TT +L PAL RPLVFDP+A++W +GP L  PRRWC+AG+LG ++YVASG+GSH
Sbjct: 145 NLVLVAATTSNLLPALPRPLVFDPVAKKWAFGPPLATPRRWCSAGALGGAVYVASGIGSH 204

Query: 219 FSTDTARSVEKWDLSA---HPEDG----WEKVSPLRDGRFSREAADAVGWRGRLCMVNVK 278
           FS D ARSVEKWDL+    HP D     WEK   LRDGRFSR+A +AVGWRG+LCMVN+K
Sbjct: 205 FSIDVARSVEKWDLTKNKKHPNDHLGWEWEKARGLRDGRFSRDAIEAVGWRGKLCMVNLK 264

Query: 279 GDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDGW 338
           GDA K+G +YDV+ D W DM EGM+GGW+GP AAMDEEV+Y+V+E+KG +++Y  E D W
Sbjct: 265 GDAVKEGLMYDVEKDTWQDMPEGMIGGWKGPVAAMDEEVMYVVDEAKGALRRYNPEKDVW 324

Query: 339 VEVAESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNVAAVHV 394
           VE+ ESERL GA Q+A  GGR+C+VC+G  +I+VVDV A+PP    V+ P G    A+H+
Sbjct: 325 VEILESERLIGADQIAGGGGRVCVVCRG--KILVVDVTAAPPSFRDVKTPLGLEAVAIHI 373

[Close]

BLAST of Spo17478.1 vs. ExPASy Swiss-Prot
Match: SKI25_ARATH (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana GN=SKIP25 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.300e-88
Identity = 173/371 (46.63%), Postives = 235/371 (63.34%), Query Frame = 1


		  
Query: 37  QQQQLIPGLPNHIAHLILTKIP-PSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIK 96
           +   LI GLP+HI+ + L+ +  PS+L +V   WR+ + SP FP F SLY L + +    
Sbjct: 31  ENSALIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDST--S 90

Query: 97  DSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPPP----LSLLLRHPPFISRDLPVQSV 156
           D+    P        + F  F+P+S +W  LP PPP      +L RHP FIS +LP+Q V
Sbjct: 91  DTGRVNP-------SVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCV 150

Query: 157 TVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASG 216
           +   +L ++AG+ Q L+PA+S PL+FDP++  W  GP +  PRRWCA G+   +IY+ASG
Sbjct: 151 SAAGKLILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASG 210

Query: 217 VGSHFSTDTARSVEKWDLSAHPEDG----WEKVSPLRDGRFSREAADAVGWRGRLCMVNV 276
           + S FS+  A+SVEK DL+    +     WEK+  +RD RFSREA DAVG+R +L MVNV
Sbjct: 211 ISSQFSSTVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNV 270

Query: 277 KGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDG 336
           KGDA K+GA+YDV  D W  M E M+ GWRGP AAM+EE++Y V+E +G V+KY +E   
Sbjct: 271 KGDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKRE 330

Query: 337 WVEV----AESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNV 395
           W EV       E L+GA Q+ A  G+LC+V  G  +IVVVDV A P ++W VE P G   
Sbjct: 331 WREVVVVEGGEEMLKGATQVTADSGKLCVV-TGDGKIVVVDVAAEPAKIWNVEIPDGLEP 390

[Close]

BLAST of Spo17478.1 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.300e-10
Identity = 83/342 (24.27%), Postives = 130/342 (38.01%), Query Frame = 1


		  
Query: 32  QEENKQQQQLIPGLPNHIAHLILTKIP---PSILYSVSISWRKFINSPLFPPFLSLYTLL 91
           +E   + Q LI GLPN IA L L ++P    ++  SVS SW K I +P F        L 
Sbjct: 19  EETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRF--------LF 78

Query: 92  IPNNIIKDSPNSIPIP-QQFLTPISFFSFDPISCQWRQLPLPPPLSLLLRHPPFIS-RDL 151
              ++   SP        +    I + S D  S +W  LP  P     +  P  +S   +
Sbjct: 79  SKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASM 138

Query: 152 PVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSL-GES 211
           P Q      +L V+ G   + +      +V+  L   W     +  PR +  +G++ G+ 
Sbjct: 139 PRQG-----KLFVLGGGDVNRS-----AVVYTALTNRWSCISPMMSPRTYFVSGNVNGKI 198

Query: 212 IYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKVSPL-------RDGRFSREAADAVGW 271
           + V   VG +    T   VE +D      D W  V  L             +E     GW
Sbjct: 199 MAVGGSVGGNGEATT--EVESYD---PDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGW 258

Query: 272 RGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVV 331
                           G VYD  +  W +M  GM  GW G +  + + +  + E     +
Sbjct: 259 AWPFMF-------PPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPM 318

Query: 332 KKYVEESDGWVEVA----ESERLRGAQQMAARGGRLCIVCKG 357
           K Y  + D W  V+    + E++R    +     R+ +V  G
Sbjct: 319 KVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASG 330

[Close]

BLAST of Spo17478.1 vs. TAIR (Arabidopsis)
Match: AT1G31350.1 (KAR-UP F-box 1)

HSP 1 Score: 325.5 bits (833), Expect = 4.700e-89
Identity = 173/371 (46.63%), Postives = 235/371 (63.34%), Query Frame = 1


		  
Query: 37  QQQQLIPGLPNHIAHLILTKIP-PSILYSVSISWRKFINSPLFPPFLSLYTLLIPNNIIK 96
           +   LI GLP+HI+ + L+ +  PS+L +V   WR+ + SP FP F SLY L + +    
Sbjct: 31  ENSALIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDST--S 90

Query: 97  DSPNSIPIPQQFLTPISFFSFDPISCQWRQLPLPPP----LSLLLRHPPFISRDLPVQSV 156
           D+    P        + F  F+P+S +W  LP PPP      +L RHP FIS +LP+Q V
Sbjct: 91  DTGRVNP-------SVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCV 150

Query: 157 TVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSLGESIYVASG 216
           +   +L ++AG+ Q L+PA+S PL+FDP++  W  GP +  PRRWCA G+   +IY+ASG
Sbjct: 151 SAAGKLILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASG 210

Query: 217 VGSHFSTDTARSVEKWDLSAHPEDG----WEKVSPLRDGRFSREAADAVGWRGRLCMVNV 276
           + S FS+  A+SVEK DL+    +     WEK+  +RD RFSREA DAVG+R +L MVNV
Sbjct: 211 ISSQFSSTVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNV 270

Query: 277 KGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVVKKYVEESDG 336
           KGDA K+GA+YDV  D W  M E M+ GWRGP AAM+EE++Y V+E +G V+KY +E   
Sbjct: 271 KGDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKRE 330

Query: 337 WVEV----AESERLRGAQQMAARGGRLCIVCKGGSEIVVVDVVASPPRMWVVEPPKGFNV 395
           W EV       E L+GA Q+ A  G+LC+V  G  +IVVVDV A P ++W VE P G   
Sbjct: 331 WREVVVVEGGEEMLKGATQVTADSGKLCVV-TGDGKIVVVDVAAEPAKIWNVEIPDGLEP 390

[Close]

BLAST of Spo17478.1 vs. TAIR (Arabidopsis)
Match: AT2G24540.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 3.000e-11
Identity = 83/342 (24.27%), Postives = 130/342 (38.01%), Query Frame = 1


		  
Query: 32  QEENKQQQQLIPGLPNHIAHLILTKIP---PSILYSVSISWRKFINSPLFPPFLSLYTLL 91
           +E   + Q LI GLPN IA L L ++P    ++  SVS SW K I +P F        L 
Sbjct: 19  EETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRF--------LF 78

Query: 92  IPNNIIKDSPNSIPIP-QQFLTPISFFSFDPISCQWRQLPLPPPLSLLLRHPPFIS-RDL 151
              ++   SP        +    I + S D  S +W  LP  P     +  P  +S   +
Sbjct: 79  SKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASM 138

Query: 152 PVQSVTVGDRLAVVAGTTQDLAPALSRPLVFDPLAREWRYGPGLPVPRRWCAAGSL-GES 211
           P Q      +L V+ G   + +      +V+  L   W     +  PR +  +G++ G+ 
Sbjct: 139 PRQG-----KLFVLGGGDVNRS-----AVVYTALTNRWSCISPMMSPRTYFVSGNVNGKI 198

Query: 212 IYVASGVGSHFSTDTARSVEKWDLSAHPEDGWEKVSPL-------RDGRFSREAADAVGW 271
           + V   VG +    T   VE +D      D W  V  L             +E     GW
Sbjct: 199 MAVGGSVGGNGEATT--EVESYD---PDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGW 258

Query: 272 RGRLCMVNVKGDAAKQGAVYDVKDDVWYDMKEGMVGGWRGPAAAMDEEVIYMVEESKGVV 331
                           G VYD  +  W +M  GM  GW G +  + + +  + E     +
Sbjct: 259 AWPFMF-------PPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPM 318

Query: 332 KKYVEESDGWVEVA----ESERLRGAQQMAARGGRLCIVCKG 357
           K Y  + D W  V+    + E++R    +     R+ +V  G
Sbjct: 319 KVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASG 330

The following BLAST results are available for this feature:

BLAST of Spo17478.1 vs. NCBI nr
BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
BLAST of Spo17478.1 vs. ExPASy Swiss-Prot
BLAST of Spo17478.1 vs. TAIR (Arabidopsis)

BLAST of Spo17478.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902177632\|gb\|KNA08979.1\|	2.8e-229	99.0	hypothetical protein SOVF_1577...	[more]
gi\|731333029\|ref\|XP_010677516.1\|	2.7e-163	74.5	PREDICTED: F-box/kelch-repeat ...	[more]
gi\|661878556\|emb\|CDP17709.1\|	7.0e-119	55.3	unnamed protein product [Coffe...	[more]
gi\|747040293\|ref\|XP_011074258.1\|	4.2e-116	55.9	PREDICTED: F-box/kelch-repeat ...	[more]
gi\|645265200\|ref\|XP_008238037.1\|	3.6e-115	57.1	PREDICTED: F-box/kelch-repeat ...	[more]

BLAST of Spo17478.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QNY4_SPIOL	2.0e-229	99.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8F6E7_BETVU	1.9e-163	74.5	Uncharacterized protein OS=Bet...	[more]
A0A068VAZ1_COFCA	4.9e-119	55.3	Uncharacterized protein OS=Cof...	[more]
B9HPR6_POPTR	3.3e-115	56.0	F-box family protein OS=Populu...	[more]
M5WZH1_PRUPE	3.3e-115	57.5	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo17478.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
SKI25_ARATH	8.3e-88	46.6	F-box/kelch-repeat protein SKI...	[more]
AFR_ARATH	5.3e-10	24.2	F-box protein AFR OS=Arabidops...	[more]

BLAST of Spo17478.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G31350.1	4.7e-89	46.6	KAR-UP F-box 1	[more]
AT2G24540.1	3.0e-11	24.2	Galactose oxidase/kelch repeat...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 112..356 score: 1.7
None	No IPR available	PANTHER	PTHR24412	FAMILY NOT NAMED	coord: 33..376 score: 2.6E
None	No IPR available	PANTHER	PTHR24412:SF217	F-BOX/KELCH-REPEAT PROTEIN SKIP25	coord: 33..376 score: 2.6E
None	No IPR available	PFAM	PF13964	Kelch_6	coord: 146..194 score: 1.
None	No IPR available	unknown	SSF117281	Kelch motif	coord: 111..360 score: 1.16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010114	response to red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009744	response to sucrose
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09335	0.67	Barchart \| Table
Spo00256	0.66	Barchart \| Table
Spo13393	0.66	Barchart \| Table
Spo02573	0.65	Barchart \| Table