Spo16951 (gene) | SpinachBase

Overview


Name	Spo16951
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein LOW PSII ACCUMULATION 1, chloroplastic (Precursor)
Location	chr6 : 22202390 .. 22208476 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCAAACCTACCTCCATCCCCGCCTACTTGGAACGGATGCGGGGCGGGTCTCCCACAAAACCCGCCCCACTGACATCCCTACTCTTACCGAAACACAATCAGCCCCGTAAAATAATTAAACTCGAACAAGGAACATGCGTACCTTGGTGCGTGGCACAATTCTAGTCATCAAACGGACGCATAATTTCAGCCTCAATCTATCCTACCACCCCAAAAAAACCCACAAAAAATTAAAAATCGGGGTATCCTTAATCAAAAATTTTAACACCAACTTTCGCCATTGATAACCTTTAATTGCTGATGTTCTTCACCTTCAAATTGTCCTCCAAATTATGGCTGCTGTGGCCCAAGTTGCCCATTTTCTGAGATGGGAACCCCGCAATTTCTCTCTCCAAAATAGTAGGACTAAAAACTGCTCCACATTTTCTCACCAAAATCTGTGGTTTGGGAAGGTTTCTCTCTCTATTTATGGTTATGGCTGTAACGGTAGAAGAAAAAGAAGTTATTCTTCCGCTGTTTTTACTTGCTCTGCTTCGAATAAACCCTCTACTTCTTCAGATGAAATCAGGTTTGATTTTGTAATTTCTTTCGCTTTTTTTTCTTGTGATTTATGATGATTGCATTAATTTGACGTTGTATTTAATTTCTCTGTATCATGCTTAAAAAGTTTTTATTTTTTAATGTCGTTTAATGTTTAGAGTGGATGGAATTTGAGATTCATTTAAATGATAAAATTAAAGTGAAAATTCTAGATGAAGCATGTGTCTTCGTTTGAGTTTGTGTATTGTTAATACATGAGAATCTGGAATGGTTGAGGGTGAATTAAAAACTTTCAAAGACAGCATGATCTTGTATAAGACGGACTTATAATAACTTATACAGGTGATAAGTTAGTGTAGGTTTGCCTCACCTAAAAGGCTAAAACTCACTCTTGAGAAAGTATTCCTCATTCCTGTATATAAGTTCCTTGCTTTAATAAGTTAGGATTTAATTTTGACAACATCCTAAACATGTATATTTGGGAAGTGTAGAGATGATTGTTTCTGAAATGCTCATTTTTCTTTGCTCAACTACTAATGATAGTATTAAAATGTGCAACTGAAACTTACAATACATGTTTGAAAGGTAATCAGAGCTTGAATGGGCTCTATAAAAGGCAATGTATTTTGAAATTAAATTAAGATGTGATGATATTTTAATTTCTCTGTCCCTAAGATATAGGCCACATTTGATGATGGGTCTTTTTTGAGGAATTGTGGTTTCAGTTTTGCATGTCTAACATGCTAATGTATTTTTTTTGGAAAAATCTCAGTTAAGGGCATCATTAAGGGTCATATGAGAAAGGTGGTCTGTTGTATTGGGACAGCCTTTAGTAGAAACATACGGAGTAGCTTATTTATTTGGGACGGAAGAAGTACTTTTAGTCGCTTCTGTCTTTGTCCTGTTTATATTTCCTGGATGTGTTACGACTTACGAGACTTATGACTGGTAGAGAGACTTGATAAAAACATGTTCATCTGTGTACTTACCATAGATAAAAAATGCGGTATCGGTCACCGTCGCGGGATCGGTCGCGGAGTCTCGGTAACGGAACTGATGCGTTAGTCGCGGACTGTGTCGCGGTTGTCGCGTAGGAATTTGAAATTTAAAAAGAATCCCCATGTCAGCCCCATTCACTACCTACCCTAGTCCCCCTCCCCTAAACCGTACACGCGACATAATTAAAATGAATTCCTTTCTCTACCTTCTCTCCTCTCTTGTTTTTTATTTGAAAATGGAGTTCTCTACTCTATTTCAATGGAGTTTCTCCATTTCTTTCATTTTTCCCTTTTGCCGAAAACATGGGAATTCGACTGAAAACCGAGTAGATGTGAGGTTTATAACGTTCAATGCGGACAAAATTCGTTGGGATCGGTTGAACCGGCCGAGATCTCGCCGTTTTTAAAAACACCTTTACAACTCGGGATATCTCGTATCGCCAGCCTCCAAAACCTTGTTAACTCGGGCGATACGAGTTAACTCGGGCTAGTTTTTACACCATGGTACTTACTCTAACTAGCTTTCTTCTGTCTTTCTACTTTTTCCCTTGATATCCTTCTTGATATACTACAACTTGTTAATATCACCTATAAACCATTTTATTCAAAAAATAAATAAATTGTGTTGTACTGTAAAAATTTGGAATTCGCATTAAGTTGATATACATGTCTTGCTAATAGTGTATATCAGGTTATCCTTTTGTCTAACTTGATTAATACTTGTCTTATCAGGTTGTGATTTCCAAGTATGGCTTCTTCCCTGTATTCATGATTTTATTTGTTATTCAGTTCTACAGCCAAGATAAGGAGTGAAGTTCTTACTCCTTTCCGCTCTGTTCGAATGTTCTTTTATCTTGCTTTCATTGCAAGTGCTGGCTTGGGTTCATTAATAGCTGTATCACAACTGATTGGCGCTCTAGCAAATCCATTCAGATCAGCTGAAGTACCTGAAATTCTCAAGGGTCTTGGCATAGATGTAGCCGCAGTTTCTATCTTTGCCTTTCTATATAGTAGAGAGAACAAGGCAAAGAATGCACAGATAGCCAGACTTTCAAGAGAAGAGAACCTTGCTAATCTTAAGGTCCGTATTGTTAATCGGAAGACCATTCCAATTAGCTCATTAAGAGGTATTGCTCGCCTTGTTATTCTTGCTGGTCCTAGCTCCTTTATTGCCGAGTCCTTTAAGCTTAGTGAACCTTTCACTGCGGATCTTTTGGAAAGAGGGGTACTTGTGGTTCCGCTTACAACTGATGCAGAGCTACCTACGTTTGAATTTGATGAGAGTGAAGAAATGAAGGAGATGACAAGTAAAAGGAAGAAGCTTTGGCAGTTGCTTCCTTTTGATATTTCTCAATGGTCCAAGTAAGGGTCTAGCTATATATGAAGTTCATTGCTTTCATATTTCTTGTGTTCTTCTCTTCCTTTTTCTCAAAATGTTTGTTCTTATTCAATACAGATGGATAGATGCACAGAAGGAGTTAGCAAATGTCTCTTCTGATTCTCCAGTGTAAGTCCATTGTTTTTAATATTCTATAGCTTGCTTATTATTTTCCCATTATCGGAACATATAATTCTTTTCTATTGTTGTAGGAAATCTCAGTGCTTTTGCTAACCGAAAATTCCTTAAGTTGATAAATTTCTCCAAAAATCATCATCATTTTACCTTGGTGAACACTGACAGAAAATTACTACCAAAAATGCACATAAAATCCTGCTATCATACTGAAAGTCCTATGCTGCGTTAAATTTTCTTTCAAGATACTCTCATTAGGAACATTATTAATTTACTGTACACCTTATTGGAGTGTGTCTTGTTAAACCACCCTACACCAGCTGACCAGCCAGTTTTTTCTATAAAAAAAAATCAGTGTGTAAAGATTTGTGAAGGCTCAAAGCTTTAACATATTATTAATCTCAAAGAGTATTTATACAAGAAATATCTTAGGCAACCAAGAACTAACTTATGCATCACATTGATTTAGGAAATAAATGTTAAGTTCCTAATACCTCATCAATACTTCAACATCCTATCATCAATACTTCAACAGTTACGGCAATACCTCAACATTCCTAATCACTATCATGAATACTTTGACCGTTACAGGAATACTTCAACTTCCCNCCCCCCCCCCCCCCCCGACAACTGTGTCAATGTTGGAACATAGGACAATGCAACCAAACCTTCTGTTATAGCATCTCGTACAAAATGACAACTCCACGAACTGGAGTTTTAGCCAAGTGAAGAGCGGAGTGACTTCACAAACCCTTGAGCCATTTCAGCTCACAACAAACCCACGATATTCTATCAGTCAATACCCTCTCGCAATCAGAACGGCAGTTCCACGATCGTTGCGATTGGAGATATAAAAAAGAAAACTTCATACGCCTGTCTTGTCGTGTCAAGGAGTCCTGGCGTTTCAAGAAATCATGTCATTTCGTACAAGAGGAAAAAAACACTAATATGAACGGTATGAACCTTGTCTCACGGTACAAGGAGAACCAAATTAACCCTGTCTCACGGCACAAGGAGAACCAAACTCTATCTCACGGCACTAGGAGAACCGTCCATGTCTTACGACACAAGGAGAACCGTCCATGTCTTACGACACACGGAAAACCGTCCATGTCTTACGACACACGGAAAACCTTCCATGTCTTACGACACATGGAAAACCGTAAAAATCATGACAACTTTAGTGAAGTTTTAATAGTACTCCAATATCAAAACATAACAAGAACCCAAACAAATACTCTAAATTTCTTGAATATCGAATTCAACCACATAACCATGAACATCGCACAAATCCGCAAACCTTTAACACATCAAAGTGATTTTCTGTTAGATTTGAACTTGTAAGCTGCTGTTAGCTTTGGTTTTCTTGGCTGTCTAGACTTTGTGGCCTTGTGCTTGTATTTGGGTTGTTGCCTTCTTTCTTCCCCTTTTGGTAATAAAATTCTTTAATTGCCAAAAAAAAAAAAAATACTTTCCTAAAATTACCCCAATACACGAACCAATAGAAATCCCCCTTTCTTTAAATGGAAAAATAGAAATCAAACTTTATAATGAAACGTAAATAAACACAACGGAAGTATAATAATCGGGAAAAAGAAAATCTATAATTTTGGGTATTGTTTATGAATCCCACCGGTGAGTTTAATTTTCTAAACCCACCGGCAGGGGAATGTTTATAAATCGATTCCAAAATCTAACCTGCTCTGATACCATGTTAAGATAGTAATTAGGAAAGTTGAAGTATTCCTGTAACGGTCAAAGTATTCATGATAGTAATTCATGATAGTAATTAGGAATGTTGAGGTATTGCCGTAACTGTTGAAGTATTGATGATAGGATGTTGAAGTATTGATGAGGTATTAGGAACTTAACATTCATTTCCTAAATCAATGTGATGCATAAGTTAGTTCTTGGTTGCCTAGGATATTTCTTGTGTAAATACTCTTTGAGAATAATAATATGTTAAAGCTTTGAGCCTTCACAAATTTTTACATGGTATCAGAGCTAGACCCACAACTGGGACCTTACTGTAGTGTATTCTGGGCCAACTAAACGGGATACAAGTGAGGGGGAGCGATAAAAGACACTCTGACCCATGAAAACATCACATGTGACCCATATTAAAAAAGAGGGACCTCACACGTAAGGGGAAGTGTTAAGATCTAACCCATAAAACAACACGTGTGAGAGTCCCACATTGACAGAACATGAGAGATTTAATCACTTAATAAGGCAAAGGGGCTACTCCCCTTATTGCCATATGGTTTTAAGGTGAAACCTCCTACTGTCTTGTTAAGTGGACTCTCTCTCTTGGTGACGGGTGCGACCCAAGCCCGTATTTAACACAGTGAAAAGAAATTATCATCAAAATGTATTTTGTGGGGTGTGCTCTATGGTTTGTTTGGCACAGGAATTGACCAACCTGTAAAGTATCAGAACTACTGAACTAGGCAACCATTCTATCTTTTATGCAGTGTGCGTGTTTAAACGGCCTATGAGGCTATTGAAGGTTCTCTATTCCTAATATCTCAGCATTTTCGGAATGGCTTGCTTATATGCATCATGTACCATGTACAGGTATATGTCCCTACGCATGGATGGCCGTGTTCGTGGAAGTGGAGTTGGTTACCCGCCATGGGGTGCTTTTGTGGCACAGCTACCGCAGGTAAAGGGTTTGTGGTCGGGCCTTCTTGATGGTATGGATGGGCGAGTTTGATAGAGTATTCGTTCATATTGTTTGTTGGCAAGGTTAGATTTTACTTTTTATTTGTACCCATTGGCAACAACCATTTGTATATCTCAAGTGCACAAAACTTGGATTAGGAGAATGTATTTACGACATAAATATTATTCCCTTACACACAAAATGAAATATGGTCAACTCTTCTGACCTTCCAACTGATCTTATTGCTCATATACTTTCAATAATTTTGTTTGATCTTGGTTATCATTGTAGTAATCTTCAAAATAGACCAGTTGAATTGATAAGCTCAAATGTATGAGGAGCCGACAATTTTGTGATTCCAAGTAAAT

mRNA sequence

CCCGCCAAACCTACCTCCATCCCCGCCTACTTGGAACGGATGCGGGGCGGGTCTCCCACAAAACCCGCCCCACTGACATCCCTACTCTTACCGAAACACAATCAGCCCCGTAAAATAATTAAACTCGAACAAGGAACATGCGTACCTTGGTGCGTGGCACAATTCTAGTCATCAAACGGACGCATAATTTCAGCCTCAATCTATCCTACCACCCCAAAAAAACCCACAAAAAATTAAAAATCGGGGTATCCTTAATCAAAAATTTTAACACCAACTTTCGCCATTGATAACCTTTAATTGCTGATGTTCTTCACCTTCAAATTGTCCTCCAAATTATGGCTGCTGTGGCCCAAGTTGCCCATTTTCTGAGATGGGAACCCCGCAATTTCTCTCTCCAAAATAGTAGGACTAAAAACTGCTCCACATTTTCTCACCAAAATCTGTGGTTTGGGAAGGTTTCTCTCTCTATTTATGGTTATGGCTGTAACGGTAGAAGAAAAAGAAGTTATTCTTCCGCTGTTTTTACTTGCTCTGCTTCGAATAAACCCTCTACTTCTTCAGATGAAATCAGTTCTACAGCCAAGATAAGGAGTGAAGTTCTTACTCCTTTCCGCTCTGTTCGAATGTTCTTTTATCTTGCTTTCATTGCAAGTGCTGGCTTGGGTTCATTAATAGCTGTATCACAACTGATTGGCGCTCTAGCAAATCCATTCAGATCAGCTGAAGTACCTGAAATTCTCAAGGGTCTTGGCATAGATGTAGCCGCAGTTTCTATCTTTGCCTTTCTATATAGTAGAGAGAACAAGGCAAAGAATGCACAGATAGCCAGACTTTCAAGAGAAGAGAACCTTGCTAATCTTAAGGTCCGTATTGTTAATCGGAAGACCATTCCAATTAGCTCATTAAGAGGTATTGCTCGCCTTGTTATTCTTGCTGGTCCTAGCTCCTTTATTGCCGAGTCCTTTAAGCTTAGTGAACCTTTCACTGCGGATCTTTTGGAAAGAGGGGTACTTGTGGTTCCGCTTACAACTGATGCAGAGCTACCTACGTTTGAATTTGATGAGAGTGAAGAAATGAAGGAGATGACAAGTAAAAGGAAGAAGCTTTGGCAGTTGCTTCCTTTTGATATTTCTCAATGGTCCAAATGGATAGATGCACAGAAGGAGTTAGCAAATGTCTCTTCTGATTCTCCAGTGTATATGTCCCTACGCATGGATGGCCGTGTTCGTGGAAGTGGAGTTGGTTACCCGCCATGGGGTGCTTTTGTGGCACAGCTACCGCAGGTAAAGGGTTTGTGGTCGGGCCTTCTTGATGGTATGGATGGGCGAGTTTGATAGAGTATTCGTTCATATTGTTTGTTGGCAAGGTTAGATTTTACTTTTTATTTGTACCCATTGGCAACAACCATTTGTATATCTCAAGTGCACAAAACTTGGATTAGGAGAATGTATTTACGACATAAATATTATTCCCTTACACACAAAATGAAATATGGTCAACTCTTCTGACCTTCCAACTGATCTTATTGCTCATATACTTTCAATAATTTTGTTTGATCTTGGTTATCATTGTAGTAATCTTCAAAATAGACCAGTTGAATTGATAAGCTCAAATGTATGAGGAGCCGACAATTTTGTGATTCCAAGTAAAT

Coding sequence (CDS)

ATGGCTGCTGTGGCCCAAGTTGCCCATTTTCTGAGATGGGAACCCCGCAATTTCTCTCTCCAAAATAGTAGGACTAAAAACTGCTCCACATTTTCTCACCAAAATCTGTGGTTTGGGAAGGTTTCTCTCTCTATTTATGGTTATGGCTGTAACGGTAGAAGAAAAAGAAGTTATTCTTCCGCTGTTTTTACTTGCTCTGCTTCGAATAAACCCTCTACTTCTTCAGATGAAATCAGTTCTACAGCCAAGATAAGGAGTGAAGTTCTTACTCCTTTCCGCTCTGTTCGAATGTTCTTTTATCTTGCTTTCATTGCAAGTGCTGGCTTGGGTTCATTAATAGCTGTATCACAACTGATTGGCGCTCTAGCAAATCCATTCAGATCAGCTGAAGTACCTGAAATTCTCAAGGGTCTTGGCATAGATGTAGCCGCAGTTTCTATCTTTGCCTTTCTATATAGTAGAGAGAACAAGGCAAAGAATGCACAGATAGCCAGACTTTCAAGAGAAGAGAACCTTGCTAATCTTAAGGTCCGTATTGTTAATCGGAAGACCATTCCAATTAGCTCATTAAGAGGTATTGCTCGCCTTGTTATTCTTGCTGGTCCTAGCTCCTTTATTGCCGAGTCCTTTAAGCTTAGTGAACCTTTCACTGCGGATCTTTTGGAAAGAGGGGTACTTGTGGTTCCGCTTACAACTGATGCAGAGCTACCTACGTTTGAATTTGATGAGAGTGAAGAAATGAAGGAGATGACAAGTAAAAGGAAGAAGCTTTGGCAGTTGCTTCCTTTTGATATTTCTCAATGGTCCAAATGGATAGATGCACAGAAGGAGTTAGCAAATGTCTCTTCTGATTCTCCAGTGTATATGTCCCTACGCATGGATGGCCGTGTTCGTGGAAGTGGAGTTGGTTACCCGCCATGGGGTGCTTTTGTGGCACAGCTACCGCAGGTAAAGGGTTTGTGGTCGGGCCTTCTTGATGGTATGGATGGGCGAGTTTGA

Protein sequence

MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSSAVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16951.1	Spo16951.1	mRNA

Homology

[Close]

BLAST of Spo16951.1 vs. NCBI nr
Match: gi|902221732|gb|KNA18983.1| (hypothetical protein SOVF_065770 isoform A [Spinacia oleracea])

HSP 1 Score: 643.7 bits (1659), Expect = 1.800e-181
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1


		  
Query: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60
           MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS
Sbjct: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60

Query: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120
           AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG
Sbjct: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120

Query: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180
           ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV
Sbjct: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180

Query: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240
           NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE
Sbjct: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240

Query: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300
           FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS
Sbjct: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300

Query: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV
Sbjct: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 332

[Close]

BLAST of Spo16951.1 vs. NCBI nr
Match: gi|731347121|ref|XP_010684819.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 487.3 bits (1253), Expect = 2.200e-134
Identity = 256/332 (77.11%), Postives = 286/332 (86.14%), Query Frame = 1


		  
Query: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60
           MA+VAQVAHFLRW P NFS Q SR  + STFSHQ +  GK S+SI     +G R+   SS
Sbjct: 1   MASVAQVAHFLRWAPCNFSPQISRCHS-STFSHQFVCHGKFSISI---SVHGFRRTKSSS 60

Query: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120
             FTCSASNKPS SS++ISSTAKIRSEVL+PFRS RMFFYLAFIAS  LG LIA SQLIG
Sbjct: 61  INFTCSASNKPSASSNDISSTAKIRSEVLSPFRSFRMFFYLAFIASGSLGGLIATSQLIG 120

Query: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180
           ALANP R+AEVPEI+KGLGIDVAAV++FAFLYSR++KA NAQIARL+REENL+NLK+R+ 
Sbjct: 121 ALANPARAAEVPEIVKGLGIDVAAVAVFAFLYSRDSKASNAQIARLTREENLSNLKIRVS 180

Query: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240
           +RK IP++S RGIARLVIL+GP SFIAESFKLSEPFT  LL+RGVLVVP  TD E PTFE
Sbjct: 181 DRKIIPLNSFRGIARLVILSGPGSFIAESFKLSEPFTEMLLDRGVLVVPFATDGEFPTFE 240

Query: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300
           FDESE+M  MTSKRK+LWQLLPFDIS+WSKWID QK LANVSS+SPVYMSLR+DGRVRGS
Sbjct: 241 FDESEDMTLMTSKRKRLWQLLPFDISEWSKWIDEQKSLANVSSESPVYMSLRLDGRVRGS 300

Query: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           GVGYPPW AFVAQLP VKG+WSGLLDGMDGRV
Sbjct: 301 GVGYPPWNAFVAQLPPVKGMWSGLLDGMDGRV 328

[Close]

BLAST of Spo16951.1 vs. NCBI nr
Match: gi|902221733|gb|KNA18984.1| (hypothetical protein SOVF_065770 isoform B [Spinacia oleracea])

HSP 1 Score: 456.1 bits (1172), Expect = 5.400e-125
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1


		  
Query: 97  MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN 156
           MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN
Sbjct: 1   MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN 60

Query: 157 KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF 216
           KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF
Sbjct: 61  KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF 120

Query: 217 TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK 276
           TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK
Sbjct: 121 TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK 180

Query: 277 ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV
Sbjct: 181 ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 236

[Close]

BLAST of Spo16951.1 vs. NCBI nr
Match: gi|1021050096|gb|KZN07874.1| (hypothetical protein DCAR_000543 [Daucus carota subsp. sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 2.900e-110
Identity = 212/306 (69.28%), Postives = 251/306 (82.03%), Query Frame = 1


		  
Query: 28  CSTFS-HQNLWFGKVSLSIYGYGCNGRRKRSYSSAVFTCSASNKPSTSSDEISSTAKIRS 87
           C  FS H N       LS     C  +R R+    + TCSAS++P TSS + SS AKIRS
Sbjct: 25  CLGFSRHLNRHESGFILSTATLSCTLQR-RTRLRCLITCSASDEP-TSSPQFSSDAKIRS 84

Query: 88  EVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVS 147
           EVLTPFRSVRMFFYLAFIASA LG LIA +QLIGAL+NP R+AEVP+IL+GLGID+AAVS
Sbjct: 85  EVLTPFRSVRMFFYLAFIASASLGGLIATTQLIGALSNPSRAAEVPKILEGLGIDIAAVS 144

Query: 148 IFAFLYSRENKAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFI 207
           +FAFLYS +N AKNAQ+ARL+REENL+NLK+R+  +K +P+++ RG ARLVI++GPSSFI
Sbjct: 145 VFAFLYSGDNNAKNAQLARLTREENLSNLKLRVNEKKVVPVNAFRGFARLVIVSGPSSFI 204

Query: 208 AESFKLSEPFTADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDIS 267
           +ESFK SEPFT  LLERGVLVVP  TD ELP F+FDESEEMKE+T KRK+LWQL P  ++
Sbjct: 205 SESFKFSEPFTEGLLERGVLVVPFATDGELPDFQFDESEEMKELTGKRKRLWQLNPVLLT 264

Query: 268 QWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLD 327
           +WSKW+D QK+LANVSSDSPVY+SLR+DGRVRGSGVGYPPW AFVAQLP +KGLW+GL D
Sbjct: 265 EWSKWLDEQKKLANVSSDSPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPPIKGLWTGLFD 324

Query: 328 GMDGRV 333
           G DGRV
Sbjct: 325 GFDGRV 328

[Close]

BLAST of Spo16951.1 vs. NCBI nr
Match: gi|255560289|ref|XP_002521162.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 [Ricinus communis])

HSP 1 Score: 406.4 bits (1043), Expect = 4.900e-110
Identity = 207/273 (75.82%), Postives = 237/273 (86.81%), Query Frame = 1


		  
Query: 60  SAVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLI 119
           S+   CSA+NKPS  +D ISSTAKIRSEVL+PFRSVRMFFYLAFIAS GLG+LIA +QLI
Sbjct: 59  SSSIACSAANKPSPPTD-ISSTAKIRSEVLSPFRSVRMFFYLAFIASGGLGALIATTQLI 118

Query: 120 GALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRI 179
            ALANP R+AEVPEILKGLGID+ AVSIFAFLY REN AK AQ+ARLSREE+L+NLK+R+
Sbjct: 119 AALANPARAAEVPEILKGLGIDIGAVSIFAFLYYRENNAKQAQVARLSREESLSNLKLRV 178

Query: 180 VNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTF 239
            ++K I ISSLRGIARLVI AGP S++ ESF+LSEPFT  LL+RGVLVVP  TD   P F
Sbjct: 179 DDKKIISISSLRGIARLVICAGPGSYVLESFRLSEPFTQSLLDRGVLVVPFATDGNFPNF 238

Query: 240 EFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRG 299
           EF+ESEEMKE+TSKRK+LWQL P  +S+WSKW+D QK +A VS +SPVY+SLR+DGRVRG
Sbjct: 239 EFEESEEMKEITSKRKRLWQLNPTFVSEWSKWLDEQKNMAGVSPESPVYLSLRLDGRVRG 298

Query: 300 SGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           SGVGYPPW AFVAQLPQVKG+WSGLLDGMDGRV
Sbjct: 299 SGVGYPPWNAFVAQLPQVKGMWSGLLDGMDGRV 330

[Close]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065770 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.300e-181
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1


		  
Query: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60
           MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS
Sbjct: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60

Query: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120
           AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG
Sbjct: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120

Query: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180
           ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV
Sbjct: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180

Query: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240
           NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE
Sbjct: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240

Query: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300
           FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS
Sbjct: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300

Query: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV
Sbjct: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 332

[Close]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0H3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g166480 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.500e-134
Identity = 256/332 (77.11%), Postives = 286/332 (86.14%), Query Frame = 1


		  
Query: 1   MAAVAQVAHFLRWEPRNFSLQNSRTKNCSTFSHQNLWFGKVSLSIYGYGCNGRRKRSYSS 60
           MA+VAQVAHFLRW P NFS Q SR  + STFSHQ +  GK S+SI     +G R+   SS
Sbjct: 1   MASVAQVAHFLRWAPCNFSPQISRCHS-STFSHQFVCHGKFSISI---SVHGFRRTKSSS 60

Query: 61  AVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIG 120
             FTCSASNKPS SS++ISSTAKIRSEVL+PFRS RMFFYLAFIAS  LG LIA SQLIG
Sbjct: 61  INFTCSASNKPSASSNDISSTAKIRSEVLSPFRSFRMFFYLAFIASGSLGGLIATSQLIG 120

Query: 121 ALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIV 180
           ALANP R+AEVPEI+KGLGIDVAAV++FAFLYSR++KA NAQIARL+REENL+NLK+R+ 
Sbjct: 121 ALANPARAAEVPEIVKGLGIDVAAVAVFAFLYSRDSKASNAQIARLTREENLSNLKIRVS 180

Query: 181 NRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTFE 240
           +RK IP++S RGIARLVIL+GP SFIAESFKLSEPFT  LL+RGVLVVP  TD E PTFE
Sbjct: 181 DRKIIPLNSFRGIARLVILSGPGSFIAESFKLSEPFTEMLLDRGVLVVPFATDGEFPTFE 240

Query: 241 FDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGS 300
           FDESE+M  MTSKRK+LWQLLPFDIS+WSKWID QK LANVSS+SPVYMSLR+DGRVRGS
Sbjct: 241 FDESEDMTLMTSKRKRLWQLLPFDISEWSKWIDEQKSLANVSSESPVYMSLRLDGRVRGS 300

Query: 301 GVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           GVGYPPW AFVAQLP VKG+WSGLLDGMDGRV
Sbjct: 301 GVGYPPWNAFVAQLPPVKGMWSGLLDGMDGRV 328

[Close]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJ73_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065770 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.800e-125
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1


		  
Query: 97  MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN 156
           MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN
Sbjct: 1   MFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSREN 60

Query: 157 KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF 216
           KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF
Sbjct: 61  KAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPF 120

Query: 217 TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK 276
           TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK
Sbjct: 121 TADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQK 180

Query: 277 ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV
Sbjct: 181 ELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 236

[Close]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Match: A0A166FK59_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_000543 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 2.000e-110
Identity = 212/306 (69.28%), Postives = 251/306 (82.03%), Query Frame = 1


		  
Query: 28  CSTFS-HQNLWFGKVSLSIYGYGCNGRRKRSYSSAVFTCSASNKPSTSSDEISSTAKIRS 87
           C  FS H N       LS     C  +R R+    + TCSAS++P TSS + SS AKIRS
Sbjct: 25  CLGFSRHLNRHESGFILSTATLSCTLQR-RTRLRCLITCSASDEP-TSSPQFSSDAKIRS 84

Query: 88  EVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEILKGLGIDVAAVS 147
           EVLTPFRSVRMFFYLAFIASA LG LIA +QLIGAL+NP R+AEVP+IL+GLGID+AAVS
Sbjct: 85  EVLTPFRSVRMFFYLAFIASASLGGLIATTQLIGALSNPSRAAEVPKILEGLGIDIAAVS 144

Query: 148 IFAFLYSRENKAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIARLVILAGPSSFI 207
           +FAFLYS +N AKNAQ+ARL+REENL+NLK+R+  +K +P+++ RG ARLVI++GPSSFI
Sbjct: 145 VFAFLYSGDNNAKNAQLARLTREENLSNLKLRVNEKKVVPVNAFRGFARLVIVSGPSSFI 204

Query: 208 AESFKLSEPFTADLLERGVLVVPLTTDAELPTFEFDESEEMKEMTSKRKKLWQLLPFDIS 267
           +ESFK SEPFT  LLERGVLVVP  TD ELP F+FDESEEMKE+T KRK+LWQL P  ++
Sbjct: 205 SESFKFSEPFTEGLLERGVLVVPFATDGELPDFQFDESEEMKELTGKRKRLWQLNPVLLT 264

Query: 268 QWSKWIDAQKELANVSSDSPVYMSLRMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLD 327
           +WSKW+D QK+LANVSSDSPVY+SLR+DGRVRGSGVGYPPW AFVAQLP +KGLW+GL D
Sbjct: 265 EWSKWLDEQKKLANVSSDSPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPPIKGLWTGLFD 324

Query: 328 GMDGRV 333
           G DGRV
Sbjct: 325 GFDGRV 328

[Close]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Match: B9S593_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1723640 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.400e-110
Identity = 207/273 (75.82%), Postives = 237/273 (86.81%), Query Frame = 1


		  
Query: 60  SAVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLI 119
           S+   CSA+NKPS  +D ISSTAKIRSEVL+PFRSVRMFFYLAFIAS GLG+LIA +QLI
Sbjct: 59  SSSIACSAANKPSPPTD-ISSTAKIRSEVLSPFRSVRMFFYLAFIASGGLGALIATTQLI 118

Query: 120 GALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRI 179
            ALANP R+AEVPEILKGLGID+ AVSIFAFLY REN AK AQ+ARLSREE+L+NLK+R+
Sbjct: 119 AALANPARAAEVPEILKGLGIDIGAVSIFAFLYYRENNAKQAQVARLSREESLSNLKLRV 178

Query: 180 VNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTTDAELPTF 239
            ++K I ISSLRGIARLVI AGP S++ ESF+LSEPFT  LL+RGVLVVP  TD   P F
Sbjct: 179 DDKKIISISSLRGIARLVICAGPGSYVLESFRLSEPFTQSLLDRGVLVVPFATDGNFPNF 238

Query: 240 EFDESEEMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSLRMDGRVRG 299
           EF+ESEEMKE+TSKRK+LWQL P  +S+WSKW+D QK +A VS +SPVY+SLR+DGRVRG
Sbjct: 239 EFEESEEMKEITSKRKRLWQLNPTFVSEWSKWLDEQKNMAGVSPESPVYLSLRLDGRVRG 298

Query: 300 SGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           SGVGYPPW AFVAQLPQVKG+WSGLLDGMDGRV
Sbjct: 299 SGVGYPPWNAFVAQLPQVKGMWSGLLDGMDGRV 330

[Close]

BLAST of Spo16951.1 vs. ExPASy Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.400e-26
Identity = 82/272 (30.15%), Postives = 129/272 (47.43%), Query Frame = 1


		  
Query: 76  DEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEIL 135
           D      K+ SEV  PFR VR FFY AF A+AG+     V +L+ A+     +  + E  
Sbjct: 180 DNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLETT 239

Query: 136 KGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIAR 195
               I++  + +   L+  ENK +  Q+ +++R+E L+ L +R+   + + +  LR   R
Sbjct: 240 GNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVR 299

Query: 196 LVILAGPSSFIAESFKLSEPFTADLLERGVLVVPL------TTDAELPTF---------- 255
            VILAG    +  + + ++ F  +LL RGVL+VP+      T + E   F          
Sbjct: 300 PVILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSL 359

Query: 256 -----EFDESEEMKEMTSKRKKLWQLLPFDIS--QWSKWIDAQKELANVSSDSPVYMSLR 315
                +FD   +     SK K   +     +S  +W +WI  Q+    V+    VY+ LR
Sbjct: 360 PSIGEDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILR 419

Query: 316 MDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGL 325
           +DGRVR SG G P W     +LP +  + S L
Sbjct: 420 LDGRVRRSGRGMPDWAEISKELPPMDDVLSKL 451

[Close]

BLAST of Spo16951.1 vs. TAIR (Arabidopsis)
Match: AT4G28740.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 342.8 bits (878), Expect = 2.300e-94
Identity = 180/281 (64.06%), Postives = 219/281 (77.94%), Query Frame = 1


		  
Query: 54  RKRSYSSAVFTCSASNKPSTSSDEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLI 113
           RK+   S    C A+++PS    EIS+ A+IRSEVL+PFRSVRMFFYLAFIAS  LG LI
Sbjct: 71  RKQQPLSFNTVCFAADEPS----EISADARIRSEVLSPFRSVRMFFYLAFIASGSLGGLI 130

Query: 114 AVSQLIGALANPFRSAEVPEILKGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLA 173
           A S+LIGALANP RS EV EI+KGLG+D+ A S+FAFLY  ENK KNAQ+ARLSREENL 
Sbjct: 131 ATSRLIGALANPARSGEVLEIVKGLGVDIGAASLFAFLYFNENKTKNAQMARLSREENLG 190

Query: 174 NLKVRI-VNRKTIPISSLRGIARLVILAGPSSFIAESFKLSEPFTADLLERGVLVVPLTT 233
            LK+R+  N K I +  LRG+ARLVI AGP+ FI E+FK S+ +T  L+ERGV+VV   T
Sbjct: 191 KLKMRVEENNKVISVGDLRGVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVVAYAT 250

Query: 234 DAELPTFEFDESE-EMKEMTSKRKKLWQLLPFDISQWSKWIDAQKELANVSSDSPVYMSL 293
           D   P  EFDE++   +EM+ +RKKLW++ P  + +W KW++ QK+LANVSSDSPVY+SL
Sbjct: 251 DGNSPVLEFDETDIADEEMSQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSL 310

Query: 294 RMDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGLLDGMDGRV 333
           R+DGRVR SGVGYPPW AFVAQLP VKG+W+GLLDGMDGRV
Sbjct: 311 RLDGRVRASGVGYPPWQAFVAQLPPVKGMWTGLLDGMDGRV 347

[Close]

BLAST of Spo16951.1 vs. TAIR (Arabidopsis)
Match: AT1G02910.1 (tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.900e-27
Identity = 82/272 (30.15%), Postives = 129/272 (47.43%), Query Frame = 1


		  
Query: 76  DEISSTAKIRSEVLTPFRSVRMFFYLAFIASAGLGSLIAVSQLIGALANPFRSAEVPEIL 135
           D      K+ SEV  PFR VR FFY AF A+AG+     V +L+ A+     +  + E  
Sbjct: 180 DNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLETT 239

Query: 136 KGLGIDVAAVSIFAFLYSRENKAKNAQIARLSREENLANLKVRIVNRKTIPISSLRGIAR 195
               I++  + +   L+  ENK +  Q+ +++R+E L+ L +R+   + + +  LR   R
Sbjct: 240 GNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVR 299

Query: 196 LVILAGPSSFIAESFKLSEPFTADLLERGVLVVPL------TTDAELPTF---------- 255
            VILAG    +  + + ++ F  +LL RGVL+VP+      T + E   F          
Sbjct: 300 PVILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSL 359

Query: 256 -----EFDESEEMKEMTSKRKKLWQLLPFDIS--QWSKWIDAQKELANVSSDSPVYMSLR 315
                +FD   +     SK K   +     +S  +W +WI  Q+    V+    VY+ LR
Sbjct: 360 PSIGEDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILR 419

Query: 316 MDGRVRGSGVGYPPWGAFVAQLPQVKGLWSGL 325
           +DGRVR SG G P W     +LP +  + S L
Sbjct: 420 LDGRVRRSGRGMPDWAEISKELPPMDDVLSKL 451

The following BLAST results are available for this feature:

BLAST of Spo16951.1 vs. NCBI nr
BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
BLAST of Spo16951.1 vs. ExPASy Swiss-Prot
BLAST of Spo16951.1 vs. TAIR (Arabidopsis)

BLAST of Spo16951.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902221732\|gb\|KNA18983.1\|	1.8e-181	100.	hypothetical protein SOVF_0657...	[more]
gi\|731347121\|ref\|XP_010684819.1\|	2.2e-134	77.1	PREDICTED: protein LOW PSII AC...	[more]
gi\|902221733\|gb\|KNA18984.1\|	5.4e-125	100.	hypothetical protein SOVF_0657...	[more]
gi\|1021050096\|gb\|KZN07874.1\|	2.9e-110	69.2	hypothetical protein DCAR_0005...	[more]
gi\|255560289\|ref\|XP_002521162.1\|	4.9e-110	75.8	PREDICTED: protein LOW PSII AC...	[more]

BLAST of Spo16951.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RHL1_SPIOL	1.3e-181	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C0H3_BETVU	1.5e-134	77.1	Uncharacterized protein OS=Bet...	[more]
A0A0K9RJ73_SPIOL	3.8e-125	100.	Uncharacterized protein OS=Spi...	[more]
A0A166FK59_DAUCA	2.0e-110	69.2	Uncharacterized protein OS=Dau...	[more]
B9S593_RICCO	3.4e-110	75.8	Putative uncharacterized prote...	[more]

BLAST of Spo16951.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
LPA1_ARATH	3.4e-26	30.1	Protein LOW PSII ACCUMULATION ...	[more]

BLAST of Spo16951.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G28740.1	2.3e-94	64.0	FUNCTIONS IN: molecular_functi...	[more]
AT1G02910.1	1.9e-27	30.1	tetratricopeptide repeat (TPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021883	Protein of unknown function DUF3493	PFAM	PF11998	DUF3493	coord: 79..156 score: 1.5
None	No IPR available	PANTHER	PTHR35498	FAMILY NOT NAMED	coord: 37..332 score: 5.2E
None	No IPR available	PANTHER	PTHR35498:SF1	SUBFAMILY NOT NAMED	coord: 37..332 score: 5.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0008152	metabolic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0007389	pattern specification process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009416	response to light stimulus
biological_process	GO:1901401	regulation of tetrapyrrole metabolic process
biological_process	GO:0019216	regulation of lipid metabolic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0031408	oxylipin biosynthetic process
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006508	proteolysis
biological_process	GO:0046950	cellular ketone body metabolic process
biological_process	GO:0019521	D-gluconate metabolic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010150	leaf senescence
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006552	leucine catabolic process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0034357	photosynthetic membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009706	chloroplast inner membrane
molecular_function	GO:0048529	magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0052727	capsanthin synthase activity
molecular_function	GO:0052728	capsorubin synthase activity
molecular_function	GO:0003779	actin binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004185	serine-type carboxypeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003858	3-hydroxybutyrate dehydrogenase activity
molecular_function	GO:0008442	3-hydroxyisobutyrate dehydrogenase activity
molecular_function	GO:0030267	glyoxylate reductase (NADP) activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0050321	tau-protein kinase activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046914	transition metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo07896	0.73	Barchart \| Table
Spo17860	0.73	Barchart \| Table
Spo01448	0.71	Barchart \| Table
Spo02182	0.70	Barchart \| Table
Spo16079	0.70	Barchart \| Table
Spo15447	0.70	Barchart \| Table
Spo03896	0.70	Barchart \| Table
Spo10373	0.70	Barchart \| Table
Spo14655	0.70	Barchart \| Table
Spo05339	0.69	Barchart \| Table
Spo10990	0.69	Barchart \| Table
Spo18526	0.69	Barchart \| Table
Spo00165	0.68	Barchart \| Table
Spo04093	0.68	Barchart \| Table
Spo07390	0.68	Barchart \| Table
Spo19431	0.68	Barchart \| Table
Spo19259	0.67	Barchart \| Table
Spo27198	0.67	Barchart \| Table
Spo22683	0.67	Barchart \| Table
Spo25324	0.67	Barchart \| Table
Spo15949	0.67	Barchart \| Table
Spo22921	0.67	Barchart \| Table
Spo25854	0.67	Barchart \| Table
Spo05508	0.67	Barchart \| Table
Spo01135	0.67	Barchart \| Table
Spo00314	0.67	Barchart \| Table
Spo08651	0.66	Barchart \| Table
Spo16641	0.66	Barchart \| Table
Spo17345	0.66	Barchart \| Table
Spo23228	0.66	Barchart \| Table
Spo24630	0.66	Barchart \| Table
Spo11854	0.66	Barchart \| Table
Spo12823	0.65	Barchart \| Table
Spo02464	0.65	Barchart \| Table
Spo02890	0.65	Barchart \| Table
Spo24046	0.65	Barchart \| Table