Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCGTTAAAGAGTGAGTATAATTAATTAATTAATTAATTATGCGATAGTTTATAGTTAATACGGTTAATATCGAGTTAATTTCACTTTTAGTTTCTTATATGTAGCCTTCAAAAATTACGGAGTAAAGGATTATATGTGTGACTACGTGTGTAGTTTATACTGTTATACATATCATTTTTAAAAAAAAAATTCAATATATAGTCATTTTTGTTAGGAAAATGTGTCGGTTTTAATTCATAAGAAACTCCCACTCTAAGGTGCTTTATTATGCTCTAAAAATCCCAAAAAAAAGGGGGAAAAAGAGGAGTTTGTATAAGATACAAAAATGGCGGGTCTGAACTAGGCTGGTGAACCGGGCATTTCTCTGCAACTTTGATGGCGGTTTTTCCTTGACCAAAAGGTAAATTTGGGTCTCTTTAATTTTTGATTTTTTCATATGGGGTATTTCTCTAATTTCTTGTTCACATTTCAAAAGAATCAATGGGAAAATGCATTTTACAAAAAAAAAAAACATAGAAAATATAAGAAACCCCTTAGAAAAAACAGTTTCATTTTTCACATTTCTGATTAATCCGGGTTTTTTATTCATCTTGATTTTTGATTTTCAGGAAAGATTGAATCTTTTACTGATATTGTTCATTATTTGTGGAAAATTAGATTCAAAATGTTGGAATTTTCCCGTTTTTATTGGGTTCTCAAGAATATCCCCTTTTTTTTGCATATTTTTTCTTAGGCTGATTTGCTTTTGTTGAATTTTTTCTCTGGGATCTGAATTGGTTTCCCAACAATAATAAATAGTTTATCTGGGATCTGCTAGTATTTTGGTTTAATCTGCTGATTCAAGATGTATCATTGTAATTGTTTCATGTTTGACTGTAGCAGATGTTGCAAATCCCATCTGTTTTGACATTGAGAATCAGTTTCTATGAATCTTTAGATATTGCATAAGGAAGAAATAGTTAAATTTAAATTTGGTTAAAAATGGGGACTATTTATGGCGCAACATGATTGTGGAAGTAATTATTTTAGCGGATTTTCACCAGACAAGCTATATTTTGTGAGTCAATAAGCTGAAGAAAGTACACAATTATTTTAGCGGATTTTCACTAAACAAGCTATATTTTGTATGTGTTCCTAACTGTGGAGCTGTGATGGTATTCTATTTGCAGGTTGAAACTACACATCAAGGAATTCCTCGTTCCATAGTCTCTCATCTTTGCAGAAAATATGAAACTAGAATCCAAAGGTGGCTCGTCGAGTGGTAAATCTAGTCGTAGTAGAGGCAAATTTGCCTCTCGTTTTTGTATGTTCCCCAAGGTGAAATCAGTTGTTACCGGTCCAGGCTCTGCTCCGGTTTACCTAAACGTTTATGACTTAACACCTATCAATGGCTACATGTATTGGGCAGGAGTTGGTATATATCACACTGGTATTGAAGGTTAGCATACCTTTTCTTATAGAGTTATCTGGTTAATTGCGCAAATATTAAGACAAAGGTAGAAAAGTTGACTCGCAAAACATAGTTATCTTGTTGATTAGCTAGTCTTCTTGTTGATTTTTATCAATTTATACAATAAGATTGACAGACATTATCAGTGGACATTTTTATCCTAGGACTATTGTGAAAAGGATGGAATTTAGCTCATGTTTCTTGCCTTTTAAAGCTTATGTTTATTGAAATAATTGATCTCATGATGTTCAGATTATTCATTTGGCAGAACTAGAGGTCGTTTATGTACAATACTTATGTGTTAGTCAATTATAAGCAAATGAAAGGGAAAGTCACTAATAGGTGCCTCACTTTCAATGGGGTTAGTACAAATGGATCCGATAGTATTAGTTGATCCTGAATTTTCTGCTGTTTGACAGTCAATGGCTCAGAATATGCTTTTGGTGCTCATGACTTCCCGACTAGTGGTGTGTTTGAGGTTGAACCTCGGCAATGCCCTGGCTTCAAGTTCAGGAAAGCAATATTCATGGGAACAACATCTCTACAGCCTAGTGAAGTTAGAGAGTTCATGGAGCAACAATCACGAAATTTTCATGGTGATGCTTATCACTTGATTGTCAAGAATTGCAACCATTTCTGCGACGATATCTGTTACAAGTTAACAGGAAAGAGGATTCCTAAATGGGTTAATCGACTTGCTAGAATAGGTATGTAGATTTGGACCCAATGCCTTCCTGAATGGACCTAATTTCTCTGTGTTGTGTTTTATGATGGGATCTCTATTTTAATGTGATCATTTTGATCTATCAAATTGCAATAATCTGATACAATGTTTGTTAATAATGAATGATAGGTTCAGTTTGCAACTGCATACTTCCAGAAAGTCTAAAGGCCTCTACTATTCCAGAACCCCATCTTGAAGTATATGAAAGCGACAAGAAGCACCTACGACCCTTCAGTTGCTTTTCATCCTTCTCAATGTCTCAGAAGGAAGAATCAATTTCTTCCTTGTTTTTACATTCACACTATATGGGATGTCTACCACCTTGGGATTCAAAAAGTAGGACAAAATCTGGGATTTTTGAAGAGGAAGACTGATAAGAAAAAGAACTCTTTTTTCTTCTTCTTTTCCAACCAGTTCAAGGATTTAGAGGCGTTTAGTGAACAGTATCATTTATGTTTATTGTGCATAGATCTTAGGGGGTGAGTGTACATGTGTTGTCTCGCCATTTTGATTCAATTACAGTAGTTGATTTACTGTTGTACAAGAGGACTTAAGTGTTGTCCTTGCAAATGTCTGTTTCAGTGTTAGTGCTTTTTGATTCATAAATGGGTTCTTTAGTTCTTGCATCTTAGTTCTATCCTCTTGAGCTCGAACACCAATCTTATTGTAAAGGATAGGTCTTCCTCGGATTGTTTAATCAAAGGTTGTTTTTCGATAGTTTTATGTCTTGAATTATTATGAAAATTCACATCAAAATAGGCAACTCTTGCGATGATTTTAAACCAAAA TAGCGTTAAAGAGTGAGTATAATTAATTAATTAATTAATTATGCGATAGTTTATAGTTAATACGGTTAATATCGAGTTAATTTCACTTTTAGTTTCTTATATGTAGCCTTCAAAAATTACGGAGTAAAGGATTATATGTGTGACTACGTGTGTAGTTTATACTGTTATACATATCATTTTTAAAAAAAAAATTCAATATATAGTCATTTTTGTTAGGAAAATGTGTCGGTTTTAATTCATAAGAAACTCCCACTCTAAGGTGCTTTATTATGCTCTAAAAATCCCAAAAAAAAGGGGGAAAAAGAGGAGTTTGTATAAGATACAAAAATGGCGGGTCTGAACTAGGCTGGTGAACCGGGCATTTCTCTGCAACTTTGATGGCGGTTTTTCCTTGACCAAAAGGTTGAAACTACACATCAAGGAATTCCTCGTTCCATAGTCTCTCATCTTTGCAGAAAATATGAAACTAGAATCCAAAGGTGGCTCGTCGAGTGGTAAATCTAGTCGTAGTAGAGGCAAATTTGCCTCTCGTTTTTGTATGTTCCCCAAGGTGAAATCAGTTGTTACCGGTCCAGGCTCTGCTCCGGTTTACCTAAACGTTTATGACTTAACACCTATCAATGGCTACATGTATTGGGCAGGAGTTGGTATATATCACACTGGTATTGAAGTCAATGGCTCAGAATATGCTTTTGGTGCTCATGACTTCCCGACTAGTGGTGTGTTTGAGGTTGAACCTCGGCAATGCCCTGGCTTCAAGTTCAGGAAAGCAATATTCATGGGAACAACATCTCTACAGCCTAGTGAAGTTAGAGAGTTCATGGAGCAACAATCACGAAATTTTCATGGTGATGCTTATCACTTGATTGTCAAGAATTGCAACCATTTCTGCGACGATATCTGTTACAAGTTAACAGGAAAGAGGATTCCTAAATGGGTTAATCGACTTGCTAGAATAGGTTCAGTTTGCAACTGCATACTTCCAGAAAGTCTAAAGGCCTCTACTATTCCAGAACCCCATCTTGAAGTATATGAAAGCGACAAGAAGCACCTACGACCCTTCAGTTGCTTTTCATCCTTCTCAATGTCTCAGAAGGAAGAATCAATTTCTTCCTTGTTTTTACATTCACACTATATGGGATGTCTACCACCTTGGGATTCAAAAAGTAGGACAAAATCTGGGATTTTTGAAGAGGAAGACTGATAAGAAAAAGAACTCTTTTTTCTTCTTCTTTTCCAACCAGTTCAAGGATTTAGAGGCGTTTAGTGAACAGTATCATTTATGTTTATTGTGCATAGATCTTAGGGGGTGAGTGTACATGTGTTGTCTCGCCATTTTGATTCAATTACAGTAGTTGATTTACTGTTGTACAAGAGGACTTAAGTGTTGTCCTTGCAAATGTCTGTTTCAGTGTTAGTGCTTTTTGATTCATAAATGGGTTCTTTAGTTCTTGCATCTTAGTTCTATCCTCTTGAGCTCGAACACCAATCTTATTGTAAAGGATAGGTCTTCCTCGGATTGTTTAATCAAAGGTTGTTTTTCGATAGTTTTATGTCTTGAATTATTATGAAAATTCACATCAAAATAGGCAACTCTTGCGATGATTTTAAACCAAAA ATGAAACTAGAATCCAAAGGTGGCTCGTCGAGTGGTAAATCTAGTCGTAGTAGAGGCAAATTTGCCTCTCGTTTTTGTATGTTCCCCAAGGTGAAATCAGTTGTTACCGGTCCAGGCTCTGCTCCGGTTTACCTAAACGTTTATGACTTAACACCTATCAATGGCTACATGTATTGGGCAGGAGTTGGTATATATCACACTGGTATTGAAGTCAATGGCTCAGAATATGCTTTTGGTGCTCATGACTTCCCGACTAGTGGTGTGTTTGAGGTTGAACCTCGGCAATGCCCTGGCTTCAAGTTCAGGAAAGCAATATTCATGGGAACAACATCTCTACAGCCTAGTGAAGTTAGAGAGTTCATGGAGCAACAATCACGAAATTTTCATGGTGATGCTTATCACTTGATTGTCAAGAATTGCAACCATTTCTGCGACGATATCTGTTACAAGTTAACAGGAAAGAGGATTCCTAAATGGGTTAATCGACTTGCTAGAATAGGTTCAGTTTGCAACTGCATACTTCCAGAAAGTCTAAAGGCCTCTACTATTCCAGAACCCCATCTTGAAGTATATGAAAGCGACAAGAAGCACCTACGACCCTTCAGTTGCTTTTCATCCTTCTCAATGTCTCAGAAGGAAGAATCAATTTCTTCCTTGTTTTTACATTCACACTATATGGGATGTCTACCACCTTGGGATTCAAAAAGTAGGACAAAATCTGGGATTTTTGAAGAGGAAGACTGA MKLESKGGSSSGKSSRSRGKFASRFCMFPKVKSVVTGPGSAPVYLNVYDLTPINGYMYWAGVGIYHTGIEVNGSEYAFGAHDFPTSGVFEVEPRQCPGFKFRKAIFMGTTSLQPSEVREFMEQQSRNFHGDAYHLIVKNCNHFCDDICYKLTGKRIPKWVNRLARIGSVCNCILPESLKASTIPEPHLEVYESDKKHLRPFSCFSSFSMSQKEESISSLFLHSHYMGCLPPWDSKSRTKSGIFEEED Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16783.1 vs. NCBI nr
Match: gi|902229707|gb|KNA21580.1| (hypothetical protein SOVF_041840 [Spinacia oleracea]) HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Spo16783.1 vs. NCBI nr
Match: gi|731358765|ref|XP_010690923.1| (PREDICTED: deSI-like protein At4g17486 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 443.7 bits (1140), Expect = 2.100e-121 Identity = 204/247 (82.59%), Postives = 226/247 (91.50%), Query Frame = 1
BLAST of Spo16783.1 vs. NCBI nr
Match: gi|567861114|ref|XP_006423211.1| (hypothetical protein CICLE_v10029154mg [Citrus clementina]) HSP 1 Score: 364.0 bits (933), Expect = 2.100e-97 Identity = 177/247 (71.66%), Postives = 203/247 (82.19%), Query Frame = 1
BLAST of Spo16783.1 vs. NCBI nr
Match: gi|703097794|ref|XP_010096210.1| (hypothetical protein L484_026945 [Morus notabilis]) HSP 1 Score: 358.6 bits (919), Expect = 8.700e-96 Identity = 172/243 (70.78%), Postives = 201/243 (82.72%), Query Frame = 1
BLAST of Spo16783.1 vs. NCBI nr
Match: gi|590687685|ref|XP_007042734.1| (PPPDE thiol peptidase family protein, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 357.5 bits (916), Expect = 1.900e-95 Identity = 168/245 (68.57%), Postives = 202/245 (82.45%), Query Frame = 1
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041840 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.600e-144 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHK9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g217780 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.400e-121 Identity = 204/247 (82.59%), Postives = 226/247 (91.50%), Query Frame = 1
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Match: A0A067E8D8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025832mg PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.400e-97 Identity = 177/247 (71.66%), Postives = 203/247 (82.19%), Query Frame = 1
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Match: V4SHF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029154mg PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.400e-97 Identity = 177/247 (71.66%), Postives = 203/247 (82.19%), Query Frame = 1
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Match: W9R104_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026945 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 6.100e-96 Identity = 172/243 (70.78%), Postives = 201/243 (82.72%), Query Frame = 1
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.600e-57 Identity = 94/159 (59.12%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Match: DESI2_XENLA (Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.100e-29 Identity = 66/167 (39.52%), Postives = 101/167 (60.48%), Query Frame = 1
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Match: DESI2_CHICK (Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.100e-29 Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Match: DESI2_DANRE (Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.100e-29 Identity = 64/166 (38.55%), Postives = 99/166 (59.64%), Query Frame = 1
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.000e-28 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 322.8 bits (826), Expect = 1.900e-88 Identity = 156/244 (63.93%), Postives = 191/244 (78.28%), Query Frame = 1
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Match: AT5G47310.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 228.8 bits (582), Expect = 3.700e-60 Identity = 95/166 (57.23%), Postives = 128/166 (77.11%), Query Frame = 1
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 228.0 bits (580), Expect = 6.300e-60 Identity = 110/206 (53.40%), Postives = 135/206 (65.53%), Query Frame = 1
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 224.2 bits (570), Expect = 9.000e-59 Identity = 94/159 (59.12%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 219.2 bits (557), Expect = 2.900e-57 Identity = 101/197 (51.27%), Postives = 134/197 (68.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16783.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16783.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16783.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16783.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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