Spo16641 (gene)

Overview
NameSpo16641
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaC01g20550D protein
LocationSuper_scaffold_164 : 20341 .. 26802 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAATTATGCCCTTTTGCCTCAACCACAACAACAAAATAGAACGAGAGGAAGAGGGAGAAAGAGCGTGGGAAATCATAGCTTGAAAATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAGTAAGTTCACACTATTTTCACTTCTATTTCTTCCTTCATTATTATCATGTTTCTATGTTCTCAATTCTCCAAATTTATGCCAATTTTTCTGGGTAATTGCCTAATATAATGTTCGATATGATTCAGGGGGGGAATAATTCATACCCTTTTTGAACTTTTCCCGAATTCAAAATTAGATGGAAATTGGAATGATCTACTTAGTTTGAGAAGCCCCAATTCTGGATTACTGCAAATACTTGGAAGTCGTATTTTTTAAAGTTGTACCATGATTATCTGTTTTATCTTTTAGTAGTAAACCCTTACCCCATGATTTATTGTCAGGGATGAAGGAGAAAACTAAGAGTAATTGTGCTGTAAATTGAGTTAGCATCAATTGAGGTTAGTTTTGGAGTTGGGTTTGTTAGATAAAAGACTGTCACTCCATGAAAAACATTAGAAATTTTGAATAGAGCATTTGTATCGAGCTCGGTTTGCACATGCTTGATCACTTGGTTTATTGTTATTGTGCAAGTGAGGTTCGAATGTCTATCCAATTATCCGGATGCCACTCATACTATTTTTTGGGATTGGGAGAGTGATATTACATTTGGTTTCTTAATATAACAACCACCCGGCATAGAATGTGTTGACAGAGTTCTATCTATTCACCTGATTTTCACTTTTTCTGAATTGATCTTATCTGAACTTAATTAAACTTATCTGGACTTATTAGAACTTATCAAAACTTATTTTGGTTATAAATTGTATTTGGTCAACACTTATTTTTCGTGAACTTATCTTATCTAAACTTAACTGAACCATCATGACACAATAAGACACAATAAGAAACAGTAAGTTAGTATACCGATCAGGTAGTGGTTTACCCAAGAACATCTTGTCATGATGGTATTTTTATTTTCCTATTGGACCCTAAATCAAAATGGCTCTTAAAACCTCTTCGCTTCTTTTCCATGAAGTAGAAGATAGTCGTCCCGTTATTGCTTTTGGGTCAATTGGAAACAACCTATCTGCAATTGCAGGGGTAAGGTTGCGTACACCCGACCCCCCCTTACCCCGCTTCTTGCGGGAGCCTTTTTGAGGCAATGGGGTAATGATAATGATAATGATAATGATGATGACCCTAATTGAACGAATTTGATTTAGCACCAATGAATTTCCATCACGAAGCTGATTTGGCAGTATAGTAGCTTGCTAATGAAGCGAATTGTATAGGAATTCTGATAAATTTTTACTTCTATTTCACTAGTTTGGCAACTGCGCTCATCGTCCGTGACTGAGAATAAACCATTTGACATTACTTCATGAATTTGGAGCAAGGTTGCACACTTGCATTTATTTAGAATTTCTCTAAAATTATAGAGAATCGCAGAACTATCCCTTCTGAAACTAAAGTCCAAAATACCATTGACCTGGTTAGCTATAGACCTAGAGTGCAACTTTAGCAAGTGATAAGTATTGAGAAACATTCATTTAATAGTTGCAAGATCTTCTCTGTTGTGATAAACAAATGGCGAGGGGGGTAATGGCCATATATAATAAGGTGATGGTGATATGGAAAAGAACAGCAAGAAAGACATAGACATAGAAACTTCCAAGCTAACACAGCCTACTAAAACTTAATGAAGTTGTTTTCTAAGAGTCCAAGACCGGCATTTTTTACTGCATGCAGCATAGGTGTAGGCGTGTAACCACTAGATTCTCAGATCAGCTGTGTTTTAATTAGTAAATAAGGTACTAGTATTACCTTTCAAGTCCCACTCTCTAAACAACTTCGGGTCAACTCCTTTCTTGGCCACTTTTTCTTATCCTTTAGAAATTGGCAAATAGGTTTTGTCCTCAACCCTGTGTCATACTGGATTTAATATTCTTGTGATAGAAATTAGAAACACTGCTTAAAAAAGGAGCTATAATTGTGCAGCTATAACGGGATCTATTTCTTCCTTGTGCTTCATTAGCCGTATACTTAATGGTCTACCTCATTTTGACAGCTTCATTCAACATGAGTTTGGCACCACTACTTGCAAGATACCAATTATTTATAAGTTTATTAAGTCTTTAGAGTTTGGAGTTATCATATTCACCATGAAGAGTATGGCCTAGCTGTAGATGTAAGGCACTAAAGAGTAATAACTATCACGTAATAGATGTATTCACTCTTTTCTTTGCAACGATCTCACAAATTATCAACAATTGCAAAGATAATTCACACCTATTATAAGAAAGGTGGAGTCTTTGATTAATAAGACACAAAACAGAGCAAACGTTTGGTTACAAAATTAGCAGCTTGAGGCTACAACTCTCCTACAGTGACAATACAACTCTCCAAAGTACAATACAACTCACAAAATGCCTTTTCCTCCCTTTCTCCTCTCTACTTATTTGCCTACGGTAGATGCCAAGTACTCATTAATTTATGCCTTTGTCTTCTAACTCACTCAGGTCTGCTCTGTGCTAGGCTCTGGTTTCCGTGGCTGCTTGTCCCTCTTCTGTGTTCTGTAGTATAATTCTTTTTGAGGGATGGGGGTTCGTTGCTTGTTACCTTACCTATCCCAAAACATAAAGTCATTTGCTTTTGATATCCTTCGTGTTTGTGAAATATTGGTATAGTTAATGTTATGACTCCTAATTAGTGAATTATATTTTGATTCAGATGATTTTCTTTTACTGTTCTTGTGATGGTTGTCTTGAATTGTATATTCTATGGCTATTCTCTTTCAGATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGTATGCATTAAGTATTTCACTTTATATCATAAGGTTTTAGTTAGTTTGCTTATGATCTGGATTTTATTAAGGTGTGTGATTTGTTGGATCAATTTTGACAGAATTTTGTTAGTTTCAGTTTGAGTTTCTTGTTTAATGCTAGGTTCATATAACATATAGTTTCACTGATTGTTTTCGAGGTTATTATGTAGCTTAGTAATTTTTAGGTTCTCAAGGACATGCACTTGACGTTTTTCTTGATTTGGTTAATAATTGTCACTCTTTCCATCCCTAAATAATACTTCAGCAGGTCTTATTTCTATTATCTATTTTAGGCCATTCCAAAATATTAGGTTACTTACCCTTCACTAAGAAGTCCAAATAAAGACTATATTGGTACTGTGGAAATGTAAGAATATAACTAGTGAATGATAGTTATGTATCCACGTATCCTAATCAATTTCTTCAAAATGGCCCTTATCATAAGTGGCTTATTTCCTAGGGATAGAGGAATTGCATTATAGCTTGAGAGCATCAGTCTTTTGTTAGTAGCCTTCCTTTGGTATATGGTGGTGCCCCATTGGTGTCTTCCTAATATATGCCTTTATTACTTGTCATAGAAATGAAAAAAAAAAAAAAACACAACTTGATTTTCTTATGGATTTTACTTGTATGGTTTCAGATTTGAGGTGTGTTTGTGGCTGTACTATGACTAGTTGACAACAAGATTACACTGCAGTTGGCAAGATTGAGTGCCAATTGTTAATTTGCAACATGGTGCTCTTTGCACAACTTTTCAAAGCTGATTTGTGTTTCTTACTAGATTGCTCAACTTCATAATTTGCAAAAAATAATGTTGTTTTTCTGAAACAAGTTCCACTGTGTAGTTCATGCCCGGCCCGGCGGCCCACACCCCCTCTCCCCCAAAAAATCTCAGCTTTGTTGCATGTCTGACTTTATTTATTATTAGGTTTATAATTTCCTGAATCCTGATATCTCTTGCACATACATACGCTCACCGCCTTTCCCTCCCTCTCTTTTTTCCGGTTAATTAACATAGATGAGGTTATACTATGTATCTATGAGTTTCTCTTTTTCTCCTCAGGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGGTTCGTAATTTTCAGTCTTTGAACTTATTTGCAGCACAATTGGTGCTGCTTTCCTTTGCGACTGACATGTTAAAGCTAAATCTAGGGAAACTTAGTCCTGCGAAACCTTTAAGAATTAAGAGATCTGAAGTCCTTAGCCATGCTGTTTTATGTTTTCCTCCATTCTTGTTTACTTCAGAGGATTCTATAACTGTTTTATCTTGAAGCATTTCACTCTGGTAGGTTTGGAGTTTCGGACCAATTTATAATGGAAATCTAAAATCCACAAAGAACTAATGGGCTTCTATTGATTCCTTTTATATAAAAGGCTCAAATACAGTTCTAAGTTTCTAACTTCTGAAGGGTTGGCCTTATAAGTCAATGAACTAATGCTTGTTCTAATTTATCCACTCATTGACTCGCTACTGTGTGAGCTAAAAGCCTATAGTATTTATAGTGAACTATTCTTGTATTACTTTTGAACCTCTAGCTGTAATCCAGTAATGCAATTCATAATGCATTAATGTTTGATGGTTGATTTCTTAGGACCATAAGTTTAGCACGTTTTAATTGTGTGATTCTGGACAAGCCGAACTGTGTAACTTATATATGGAGTGATTAGGCTTTACCAGTTGCAGTCTTAACTGTTTGTGGTAGATAGTTACTGAAGAAAAAATGGATTTTTCTTTCTTGTTAAAAAGTTAAAACAACTCCGTCCATTCCACTCTTATTACTGATATTTGTAGGAGAATTATTTTAGAAAATGGCTTTGACTGGATTTGGGGTAAAAAAAAATCATATGCTTCTCACATTACACCTTCTCTTTCGAAGAAAATGGATGATTAAGCCCATTAAGGTGGAATACCTAAAATCAAAATGTACAATTAGGATAATCGTGAAACAAGCTAATCATGTATTGGTCACATATGTTTCCACCCATACTTCAGAGTTCAGATATAACCATTTTCCATGCCACAGGGATATTTGACTTATGGAGTTACTGTTTATATTGACCTAAGGGGCTCCATGTTCTTTATCTTTATTCAGTAATTCCTCTCATCTGTGATAAGTATAGCTTATTGGCCTTCAACACTACACTATTAGTTTTCCTTGTGATCTTTTAAATTTATCCCACCTTTCTTTTACCTCGTCACCTTGGGCTGAGCCTTGCCAGTTTTTTCTAACAGAGAATGAGAGACAGAACATCTTATTCTGTAATTCAGATTCAGGATTCATTTTGGTAAAAATCAATAAAGCATCGTTGCTCAATGCTGTCTAGATGGTTGTCAGTGACATACTGCCGCCATGTCATTTGACTTGTTATCACCCTCAATTCAGAAACAATAGTCATGTGGGAAAAATGCCACATGTCCTGCAATTGATTAGGTTTAAGAAATCTCTTCCACTTAATTTGGGTGATGGAGAGAGGACAACTATTATTTGAGGGGGTTTCAGTGAAAGAATGGTGGATCCTTAATTATCAGTGGTTACTGGTTAGGACTTACTACATTTGCATTATCATCCCCTCCCCTTTGGCCCTCCCACGTTAAAAAAATTGTAACAGGAGTTTCTGACTGCAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGGTATGTTTTTCTTTTTTCTTTATTTTTGGTGTAACTGTATTTTAAGACCTTTGAAGTAAGATATTTGAGTGTAACACACTAATGCTATTGTGTGATAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAGAAGTTTTCCCATTCGGGCATTTGAGTTTATAGCCGTAGATTGATGGAGTTTGTACATGTTCAAGAGATTTACATTCATCCCTACCAAATTCGCAAAAAAAAAAATCTGCTTACCATCTAATTCTTGTATTTTATTGTTTTTATCATCACATTTAATCAGACAACTCCGTTCATGCTGATTCTTTCAGCAAAAGAAATTCCAATGATAGAAACACATTGAAACCAATGTGATTTGATTTGATACCCTTGTTCTTGTAATGTGACATGATATACTCTTGTACTTCGTATGTTGTACTTTGTATTCTCACGAACTGTAAACGAGGCATTATCGTTACCGACATTTATAACCGATGAAGAAAACCGTGATGGGATAGCCGGAATATTCTACCGGGAAATAGTACTTTGCTTTGGTCATAGGAATTTCTGCATGAAATTCCGCCGGACATTTTTCACCAATCCTTTTTTTATTATTCATTGACTCG

mRNA sequence

GACAATTATGCCCTTTTGCCTCAACCACAACAACAAAATAGAACGAGAGGAAGAGGGAGAAAGAGCGTGGGAAATCATAGCTTGAAAATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAGAAGTTTTCCCATTCGGGCATTTGAGTTTATAGCCGTAGATTGATGGAGTTTGTACATGTTCAAGAGATTTACATTCATCCCTACCAAATTCGCAAAAAAAAAAATCTGCTTACCATCTAATTCTTGTATTTTATTGTTTTTATCATCACATTTAATCAGACAACTCCGTTCATGCTGATTCTTTCAGCAAAAGAAATTCCAATGATAGAAACACATTGAAACCAATGTGATTTGATTTGATACCCTTGTTCTTGTAATGTGACATGATATACTCTTGTACTTCGTATGTTGTACTTTGTATTCTCACGAACTGTAAACGAGGCATTATCGTTACCGACATTTATAACCGATGAAGAAAACCGTGATGGGATAGCCGGAATATTCTACCGGGAAATAGTACTTTGCTTTGGTCATAGGAATTTCTGCATGAAATTCCGCCGGACATTTTTCACCAATCCTTTTTTTATTATTCATTGACTCG

Coding sequence (CDS)

ATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAG

Protein sequence

MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGHTGKSFLGQLDGYRHAVLSFFVWW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16641.1Spo16641.1mRNA


Homology
[Close]
BLAST of Spo16641.1 vs. NCBI nr
Match: gi|902233295|gb|KNA22983.1| (hypothetical protein SOVF_028910 [Spinacia oleracea])

HSP 1 Score: 292.0 bits (746), Expect = 5.800e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 

		  

Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS
Sbjct: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG
Sbjct: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
           HTGKSFLGQLDGYRHAVLSFFVWW
Sbjct: 121 HTGKSFLGQLDGYRHAVLSFFVWW 144
[Close]
BLAST of Spo16641.1 vs. NCBI nr
Match: gi|731352768|ref|XP_010687710.1| (PREDICTED: uncharacterized protein LOC104901794 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 208.0 bits (528), Expect = 1.100e-50
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1 

		  

Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAAS LP+ GCIIPST  QSFFTQ  ASILQWN +GKQH R+  + RGAF+MLA P+ SS
Sbjct: 1   MAASGLPVIGCIIPSTRCQSFFTQHSASILQWNFIGKQHSRRFTNTRGAFRMLANPDVSS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GK SFRKEVLMVDP+EAKK+A KQMV IKT+E++ERRR+IEAINGAWAMIGLT GL+IE 
Sbjct: 61  GKSSFRKEVLMVDPVEAKKLAAKQMVEIKTKEKFERRRRIEAINGAWAMIGLTAGLIIEC 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
            TGK  LGQL+ Y H +LSFFV W
Sbjct: 121 QTGKGILGQLNEYWHTILSFFVRW 144
[Close]
BLAST of Spo16641.1 vs. NCBI nr
Match: gi|1000937230|ref|XP_015583994.1| (PREDICTED: uncharacterized protein LOC8259350 [Ricinus communis])

HSP 1 Score: 136.3 bits (342), Expect = 4.100e-29
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1 

		  

Query: 4   SALPITGCIIPST--PRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSG 63
           S L I G ++ S+  P  S   QR A +++W    +     +  K  AF++LA PN  SG
Sbjct: 6   SPLSINGNLLLSSQYPFHSHILQRSAHVVKWGFR-RDKDSSSRTKSQAFRILANPNEVSG 65

Query: 64  KGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGH 123
           K  F+KEV+MVDPLEAK++A KQM  I+ +E+++RRRQIEAINGAWAMIGLT GLVIEG 
Sbjct: 66  KRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQ 125

Query: 124 TGKSFLGQLDGYRHAVLSFFV 143
           TGKS L QL GY  A++ FF+
Sbjct: 126 TGKSILDQLAGYWSAIVHFFL 145
[Close]
BLAST of Spo16641.1 vs. NCBI nr
Match: gi|802633462|ref|XP_012077487.1| (PREDICTED: uncharacterized protein LOC105638302 [Jatropha curcas])

HSP 1 Score: 134.8 bits (338), Expect = 1.200e-28
Identity = 79/145 (54.48%), Postives = 98/145 (67.59%), Query Frame = 1 

		  

Query: 3   ASALPITGCIIPSTPRQSFFTQ--RPASILQWNLMGKQHPRQNAH---KRGAFQMLATPN 62
           +S LPI G I+ S    S      RPA+IL+W   G+     +A    KR AF++LA PN
Sbjct: 5   SSVLPINGNILISCQYSSLSLNLHRPATILKWGF-GRDRDNNSASSRTKRQAFRILANPN 64

Query: 63  ASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLV 122
            S GKG  ++E++MVDPLEAK++A KQM  I+ +ER +RRR IEAINGAWAMIGLT GLV
Sbjct: 65  VS-GKGDSKREIIMVDPLEAKRLAAKQMQEIQAKERIKRRRLIEAINGAWAMIGLTAGLV 124

Query: 123 IEGHTGKSFLGQLDGYRHAVLSFFV 143
           IEG TGKS L QL GY  A++  FV
Sbjct: 125 IEGQTGKSILDQLAGYWFAIIHLFV 147
[Close]
BLAST of Spo16641.1 vs. NCBI nr
Match: gi|1009107385|ref|XP_015879487.1| (PREDICTED: uncharacterized protein LOC107415642 [Ziziphus jujuba])

HSP 1 Score: 133.3 bits (334), Expect = 3.500e-28
Identity = 74/144 (51.39%), Postives = 93/144 (64.58%), Query Frame = 1 

		  

Query: 2   AASALPITGCIIPSTPRQSFFTQRPASILQ---WNLMGKQHPRQNAHKRGAFQMLATPNA 61
           + S LPI G    ST    F T RP+S +    W      +      +  AFQ+LA PN 
Sbjct: 3   STSLLPINGGYPLSTHCSFFPTHRPSSTISKWGWRRYEDANIVVYRTRSQAFQVLANPNV 62

Query: 62  SSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVI 121
           S  KG F ++V+MVDPLEAK++A KQM  IK +E+++R+RQIEAINGAWAMIGL  GLVI
Sbjct: 63  SPNKGDFNRKVIMVDPLEAKRLAAKQMEQIKAKEKFKRQRQIEAINGAWAMIGLAAGLVI 122

Query: 122 EGHTGKSFLGQLDGYRHAVLSFFV 143
           EGHTGK  L QL GY   +++FFV
Sbjct: 123 EGHTGKGILAQLAGYWSIIVNFFV 146
[Close]
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU45_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028910 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.100e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 

		  

Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS
Sbjct: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG
Sbjct: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
           HTGKSFLGQLDGYRHAVLSFFVWW
Sbjct: 121 HTGKSFLGQLDGYRHAVLSFFVWW 144
[Close]
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUG6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192300 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.700e-51
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1 

		  

Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAAS LP+ GCIIPST  QSFFTQ  ASILQWN +GKQH R+  + RGAF+MLA P+ SS
Sbjct: 1   MAASGLPVIGCIIPSTRCQSFFTQHSASILQWNFIGKQHSRRFTNTRGAFRMLANPDVSS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GK SFRKEVLMVDP+EAKK+A KQMV IKT+E++ERRR+IEAINGAWAMIGLT GL+IE 
Sbjct: 61  GKSSFRKEVLMVDPVEAKKLAAKQMVEIKTKEKFERRRRIEAINGAWAMIGLTAGLIIEC 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
            TGK  LGQL+ Y H +LSFFV W
Sbjct: 121 QTGKGILGQLNEYWHTILSFFVRW 144
[Close]
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: B9T892_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_0251910 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.200e-28
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1 

		  

Query: 4   SALPITGCIIPST--PRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSG 63
           S L I G ++ S+  P  S   QR A +++W    +     +  K  AF++LA PN S G
Sbjct: 6   SPLSINGNLLLSSQYPFHSHILQRSAHVVKWGFR-RDKDSSSRTKSQAFRILANPNVS-G 65

Query: 64  KGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGH 123
           K  F+KEV+MVDPLEAK++A KQM  I+ +E+++RRRQIEAINGAWAMIGLT GLVIEG 
Sbjct: 66  KRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQ 125

Query: 124 TGKSFLGQLDGYRHAVLSFFV 143
           TGKS L QL GY  A++ FF+
Sbjct: 126 TGKSILDQLAGYWSAIVHFFL 144
[Close]
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0B0P3E8_GOSAR (Early light-induced, chloroplastic OS=Gossypium arboreum GN=F383_07234 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.600e-27
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 1 

		  

Query: 12  IIPSTPRQSFFTQRPASILQWNLMGKQHPR--QNAHKRGAFQMLATPNASSGKGSFRKEV 71
           +  S+ RQ  F  R A+I +W+    Q      +  K  AFQ+LA PN SS KG+  KEV
Sbjct: 19  LFSSSNRQ--FPHRSATIFRWSFGRDQGSSLVTSRTKGRAFQILANPNVSSDKGNSGKEV 78

Query: 72  LMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGHTGKSFLGQ 131
           +MVDPLEAK++A KQMV IK +E+ +RRRQIEAINGAWAMIGLT GLVIEG TGK  L Q
Sbjct: 79  IMVDPLEAKRLAAKQMVQIKAKEKAKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILEQ 138

Query: 132 LDGYRHAVLSFFV 143
           L GY  A++  FV
Sbjct: 139 LAGYLWAIVHIFV 149
[Close]
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: D7T0R2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00850 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.000e-27
Identity = 76/148 (51.35%), Postives = 93/148 (62.84%), Query Frame = 1 

		  

Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQH-----PRQNAHKRG-AFQMLA 60
           +++S LP  G +  S P        P    Q  L   Q      PR     RG AFQ+LA
Sbjct: 2   VSSSLLPFNGALFQSIPHP------PTVFFQRGLRRGQDASLVIPRTAHSTRGQAFQILA 61

Query: 61  TPNASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTI 120
            PN S+GKG+  KEV+MVDPLEAK++A KQM   K +E+ +RRR+IEAINGAWAM+GLT 
Sbjct: 62  NPNVSAGKGNSDKEVVMVDPLEAKRLAAKQMQEFKAKEKLKRRRRIEAINGAWAMLGLTA 121

Query: 121 GLVIEGHTGKSFLGQLDGYRHAVLSFFV 143
           GLVIEGHTG   L QL GY  A++ FFV
Sbjct: 122 GLVIEGHTGNGILAQLAGYWGAIVRFFV 143
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BLAST of Spo16641.1 vs. TAIR (Arabidopsis)
Match: AT4G28025.1 (unknown protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.400e-24
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 1 

		  

Query: 43  NAHKRGAFQMLATPNASS----GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRR 102
           N  + G  ++LA PN S     GK   +KEV+MVDPLEAK++A KQM  IK  E+ +RRR
Sbjct: 51  NRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRR 110

Query: 103 QIEAINGAWAMIGLTIGLVIEGHTGKSFLGQLDGYRHAVLSFF 142
           +IEAINGAWA+IGL IGLVIE  TGK  L QL GY  AV+  F
Sbjct: 111 EIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153
The following BLAST results are available for this feature:
BLAST of Spo16641.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902233295|gb|KNA22983.1|5.8e-76100.hypothetical protein SOVF_0289... [more]
gi|731352768|ref|XP_010687710.1|1.1e-5072.2PREDICTED: uncharacterized pro... [more]
gi|1000937230|ref|XP_015583994.1|4.1e-2953.1PREDICTED: uncharacterized pro... [more]
gi|802633462|ref|XP_012077487.1|1.2e-2854.4PREDICTED: uncharacterized pro... [more]
gi|1009107385|ref|XP_015879487.1|3.5e-2851.3PREDICTED: uncharacterized pro... [more]
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BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RU45_SPIOL4.1e-76100.Uncharacterized protein OS=Spi... [more]
A0A0J8BUG6_BETVU7.7e-5172.2Uncharacterized protein OS=Bet... [more]
B9T892_RICCO3.2e-2853.1Putative uncharacterized prote... [more]
A0A0B0P3E8_GOSAR1.6e-2756.3Early light-induced, chloropla... [more]
D7T0R2_VITVI2.0e-2751.3Putative uncharacterized prote... [more]
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BLAST of Spo16641.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16641.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G28025.11.4e-2457.2unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 89..130
score: 2.2
NoneNo IPR availablePANTHERPTHR37752FAMILY NOT NAMEDcoord: 1..144
score: 1.5
NoneNo IPR availablePANTHERPTHR37752:SF1SUBFAMILY NOT NAMEDcoord: 1..144
score: 1.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0016043 cellular component organization
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0015031 protein transport
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0030154 cell differentiation
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0009744 response to sucrose
biological_process GO:0008152 metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009644 response to high light intensity
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006950 response to stress
biological_process GO:0009639 response to red or far red light
biological_process GO:0072593 reactive oxygen species metabolic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010014 meristem initiation
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0016556 mRNA modification
biological_process GO:0010150 leaf senescence
biological_process GO:0055072 iron ion homeostasis
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0006457 protein folding
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006833 water transport
biological_process GO:0009651 response to salt stress
biological_process GO:0009750 response to fructose
cellular_component GO:0005777 peroxisome
cellular_component GO:0034357 photosynthetic membrane
cellular_component GO:0044425 membrane part
cellular_component GO:0009507 chloroplast
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0010319 stromule
cellular_component GO:0016020 membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009523 photosystem II
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003779 actin binding
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019904 protein domain specific binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0051287 NAD binding
RNA-Seq Expression