Spo16489 (gene) | SpinachBase

Overview


Name	Spo16489
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (6.4.1.2)
Location	chr2 : 26637 .. 33617 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGTCTTGGTCCTATTGAAAATACCAGTACAAAGGAAGATCCGAGTCTAAATGATCCAGAAAAACAAATTCATAGTTCGAGAAATAGTGAAAGTTCTAGTTACAGTAATGTTAATCATTTAGTTCGTGGCATTGACATTCAGAATTTCATCTCGGATGATACTTTTTTACTTATAGATACTAAAGGGGACAGTTATTCCATATATTTTGATATTGAAAATCAAATTTTTGAGATTGACAACGATCATTCTTTTCTGAGTAAACTGCAAAGTTCTTTTTCAAATTATTGGAATTCAAGTTATCTGAACTCTAGATCTAAGAATGGCGATACTTATAATGGTCATTCGCTGTATTATACTAACGATAGTTGGAATAATCACATTAATAATTGCATTGACAGTTATCTTCATTCTCAAATCCGTAGTGACAGTTCCATCCTAAGTGGTAATGACAGTTACATTTTGAGTTACATTTTTAATGAAAGTGGAAATAGGAGTGAAAGTTTCAGTAAAAGAAGTATCACGAATGGCAGTAATTTAACTAGAAGAGAAAGTTCTCATAATCTTGATGTAACTCAAAAATATAGACATTTGTGGGTTCAATGCGAAAGTTGTTATGCATTAAATTATAAGAAATTGCTGAAGTCAAAAATGGGTATTTGTGAACAATGTGGATATCATTTGAAAATAAGTAGTTCAGATAGAATCGAACTTCTGATTGATCCCGGTACTTGGAATCCAATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTNACTTTTCCTATAATTTCTAAAACAAAATGCTCAACTACCACCAAACTAAACCAAATTCGTCAAAGCTATTGAAAAGTAATTTCAGAATAACTTTTCATAAAATATCTAGAGAGTTGCAAAACTCAGTGGAAGCTTAGTGTTTGTCATTCGACAAACTAAGGCCCAAGTATAGATATATGTTTCATTGTGATTTATTCAAATGAGACACAAGGGTATTGTTTCTACCACAAATTTTTGAGAACATAATGTTTGTTTGCTCGAAATAATGTCCTTTTGGAGATTCGTTTCCAAAATGACAAGTGGGAGAAAATAGACCTCGAAAGTCTTCGAGGCGAACAACAAACATAAACGGACATTCCGGAGGCTTTTCGAAGTGCTTCAGAAAATCCGAACTTATTCTTTAAGGACTTTAGAAGTGGCTTTAAAGAATAGACATCTCTTAGAAGACTTTACAAGTGCTTCAAGGAGAACAGAATATTCAAAGGACTTTCAAGTGGCTATTGATATTCTATTGATGTTCTATACCCAAGTAGGCATAGAATTCAAGTCACTGAAACTATGAGATTCTTCTATTAGATAGTAAAGAAACATAGAGATCAGGTCAATGAAACTATGAGATTCTTCTATTAAATAGTGAAGAAACCTACAACTTGCAGTCAAACTATTATCATGTAGATTAATGAGTTTGTGACTTGTAAGAAAGCTATGACGAAACCCAAATTCCCTAGCTTGGTTAGAGGCCATATATAGACTCAAATGTTTTAAATGGTTAGAGGCCATAAAACATACTCAATGTTTTGATGACAAAATTGAAATTTTGTTGATTTGCAAGAATAGGTTCACACCTATTGGTTGCAAGTTTGTTTTAAGGATAAAAACCATCAAACATGAAATTGTGTTCACACACAAAGCTAGATTAGTTGCTAAAGGTTACAAGCAAATTCACGATGTGGATTGTGTTGAAACCTCATGCAAAATCGTAATGCTTAAGTCTATAATTCAAGCAATGATTACATATTGGTACATATGGCAATTGGATGACAAAACATCTTCCTCAGTCAAATGTTGGAAGAAACTATGTACATGGTATGTCATAGGATTTGTGGATCCAAATAAATGCTTGAAAGAGAAAGCTAGCTTATAAAATCTAAGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGGACAGTCTTGGTCCTATTGAAAATACCAGTACAAAGGAAGATCCGAGTCTAAATGATCCAGAAAAACAAATTCATAGTTCGAGAAATAGTGAAAGTTCTAGTTACAGTAATGTTAATCATTTAGTTCGTGGCATTGACATTCAGAATTTCATCTCGGATGATACTTTTTTACTTATAGATACTAAAGGGGACAATAGAATCGAACTTCTGATTGATCCCGGTACTTGGAATCCAATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGCTCCCCAAGCACGTTAAAAATTCGTCCAAGAGTCGCTCCACCGGCTGGAACGCTTAAAGGAGCTCCTGTGTCGATAACTTCCATTCCTCGCGTTAGACCATCTATAGCACTCATAGCTACATCTCTAACTCTATAA

Coding sequence (CDS)

ATGGACAGTCTTGGTCCTATTGAAAATACCAGTACAAAGGAAGATCCGAGTCTAAATGATCCAGAAAAACAAATTCATAGTTCGAGAAATAGTGAAAGTTCTAGTTACAGTAATGTTAATCATTTAGTTCGTGGCATTGACATTCAGAATTTCATCTCGGATGATACTTTTTTACTTATAGATACTAAAGGGGACAATAGAATCGAACTTCTGATTGATCCCGGTACTTGGAATCCAATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGCTCCCCAAGCACGTTAAAAATTCGTCCAAGAGTCGCTCCACCGGCTGGAACGCTTAAAGGAGCTCCTGTGTCGATAACTTCCATTCCTCGCGTTAGACCATCTATAGCACTCATAGCTACATCTCTAACTCTATAA

Protein sequence

MDSLGPIENTSTKEDPSLNDPEKQIHSSRNSESSSYSNVNHLVRGIDIQNFISDDTFLLIDTKGDNRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSPSTLKIRPRVAPPAGTLKGAPVSITSIPRVRPSIALIATSLTL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16489.1	Spo16489.1	mRNA

Homology

[Close]

BLAST of Spo16489.1 vs. NCBI nr
Match: gi|221222431|sp|Q9M3L7.2|ACCD_SPIOL (RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta (chloroplast) [Spinacia oleracea])

HSP 1 Score: 157.1 bits (396), Expect = 2.900e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 259 DRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 318

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 319 IPVAIGVMDFQFMGGS 334

[Close]

BLAST of Spo16489.1 vs. NCBI nr
Match: gi|11497537|ref|NP_054945.1| (acetyl-CoA carboxylase beta subunit [Spinacia oleracea])

HSP 1 Score: 157.1 bits (396), Expect = 2.900e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 290 DRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 349

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 350 IPVAIGVMDFQFMGGS 365

[Close]

BLAST of Spo16489.1 vs. NCBI nr
Match: gi|836642812|ref|YP_009143816.1| (acetyl-CoA carboxylase beta subunit (chloroplast) [Salicornia bigelovii])

HSP 1 Score: 150.2 bits (378), Expect = 3.500e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 278 DRIELLIDPGTWNPMDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 337

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 338 IPVAIGVMDFQFMGGS 353

[Close]

BLAST of Spo16489.1 vs. NCBI nr
Match: gi|836613938|ref|YP_009143732.1| (acetyl-CoA carboxylase beta subunit (chloroplast) [Salicornia europaea])

HSP 1 Score: 150.2 bits (378), Expect = 3.500e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 305 DRIELLIDPGTWNPMDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 364

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 365 IPVAIGVMDFQFMGGS 380

[Close]

BLAST of Spo16489.1 vs. NCBI nr
Match: gi|910354326|ref|YP_009160811.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 149.8 bits (377), Expect = 4.600e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 278 DRIELLIDPGTWNPMDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNG 337

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 338 IPVAIGVMDFQFMGGS 353

[Close]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QY59_SALBI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia bigelovii GN=accD PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.400e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 278 DRIELLIDPGTWNPMDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 337

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 338 IPVAIGVMDFQFMGGS 353

[Close]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXC4_SALEU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia europaea GN=accD PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.400e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 305 DRIELLIDPGTWNPMDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 364

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 365 IPVAIGVMDFQFMGGS 380

[Close]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8E8_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon persicum GN=accD PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.200e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 278 DRIELLIDPGTWNPMDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNG 337

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 338 IPVAIGVMDFQFMGGS 353

[Close]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K868_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon ammodendron GN=accD PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.200e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 278 DRIELLIDPGTWNPMDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNG 337

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 338 IPVAIGVMDFQFMGGS 353

[Close]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Match: A0A023ZQ52_BETVU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Beta vulgaris subsp. vulgaris GN=accD PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.200e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMD+DMVSMDPI FHSE+EAYKDRIDSYQI TGLTEAVQTGIGQLNG
Sbjct: 292 DRIELLIDPGTWNPMDEDMVSMDPIEFHSEDEAYKDRIDSYQINTGLTEAVQTGIGQLNG 351

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 352 IPVAIGVMDFQFMGGS 367

[Close]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Match: ACCD_SPIOL (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Spinacia oleracea GN=accD PE=3 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.800e-37
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG
Sbjct: 259 DRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 318

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 319 IPVAIGVMDFQFMGGS 334

[Close]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Match: ACCD_NICTO (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tomentosiformis GN=accD PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 9.200e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTW+PMD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 262 DRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNG 321

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 322 IPVAIGVMDFQFMGGS 337

[Close]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Match: ACCD_NICSY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana sylvestris GN=accD PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 9.200e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTW+PMD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 262 DRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNG 321

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 322 IPVAIGVMDFQFMGGS 337

[Close]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Match: ACCD_SOLTU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum tuberosum GN=accD PE=2 SV=3)

HSP 1 Score: 144.8 bits (364), Expect = 9.200e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTW+PMD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 257 DRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNG 316

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 317 IPVAIGVMDFQFMGGS 332

[Close]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Match: ACCD_TOBAC (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tabacum GN=accD PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 9.200e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1


		  
Query: 66  NRIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNG 125
           +RIELLIDPGTW+PMD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNG
Sbjct: 262 DRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNG 321

Query: 126 IPVAIGVMDFQFMGGS 142
           IPVAIGVMDFQFMGGS
Sbjct: 322 IPVAIGVMDFQFMGGS 337

[Close]

BLAST of Spo16489.1 vs. TAIR (Arabidopsis)
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta)

HSP 1 Score: 128.3 bits (321), Expect = 5.000e-30
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 1


		  
Query: 67  RIELLIDPGTWNPMDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGI 126
           RIEL IDPGTWNPMD+DMVS DPI FHS+EE YK+RIDS Q  TGLT+AVQTG GQLNGI
Sbjct: 261 RIELSIDPGTWNPMDEDMVSADPIKFHSKEEPYKNRIDSAQKTTGLTDAVQTGTGQLNGI 320

Query: 127 PVAIGVMDFQFMGGS 142
           PVA+GVMDF+FMGGS
Sbjct: 321 PVALGVMDFRFMGGS 335

The following BLAST results are available for this feature:

BLAST of Spo16489.1 vs. NCBI nr
BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
BLAST of Spo16489.1 vs. TAIR (Arabidopsis)

BLAST of Spo16489.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|221222431\|sp\|Q9M3L7.2\|ACCD_SPIOL	2.9e-35	98.6	RecName: Full=Acetyl-coenzyme ...	[more]
gi\|11497537\|ref\|NP_054945.1\|	2.9e-35	98.6	acetyl-CoA carboxylase beta su...	[more]
gi\|836642812\|ref\|YP_009143816.1\|	3.5e-33	94.7	acetyl-CoA carboxylase beta su...	[more]
gi\|836613938\|ref\|YP_009143732.1\|	3.5e-33	94.7	acetyl-CoA carboxylase beta su...	[more]
gi\|910354326\|ref\|YP_009160811.1\|	4.6e-33	94.7	acetyl-CoA carboxylase carboxy...	[more]

BLAST of Spo16489.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0G2QY59_SALBI	2.4e-33	94.7	Acetyl-coenzyme A carboxylase ...	[more]
A0A0G2QXC4_SALEU	2.4e-33	94.7	Acetyl-coenzyme A carboxylase ...	[more]
A0A0K0K8E8_9CARY	3.2e-33	94.7	Acetyl-coenzyme A carboxylase ...	[more]
A0A0K0K868_9CARY	3.2e-33	94.7	Acetyl-coenzyme A carboxylase ...	[more]
A0A023ZQ52_BETVU	4.2e-33	93.4	Acetyl-coenzyme A carboxylase ...	[more]

BLAST of Spo16489.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ACCD_SPIOL	1.8e-37	98.6	Acetyl-coenzyme A carboxylase ...	[more]
ACCD_NICTO	9.2e-34	90.7	Acetyl-coenzyme A carboxylase ...	[more]
ACCD_NICSY	9.2e-34	90.7	Acetyl-coenzyme A carboxylase ...	[more]
ACCD_SOLTU	9.2e-34	90.7	Acetyl-coenzyme A carboxylase ...	[more]
ACCD_TOBAC	9.2e-34	90.7	Acetyl-coenzyme A carboxylase ...	[more]

BLAST of Spo16489.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
ATCG00500.1	5.0e-30	81.3	acetyl-CoA carboxylase carboxy...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22855	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	coord: 66..141 score: 2.5
None	No IPR available	PANTHER	PTHR22855:SF15	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 66..141 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:2001295	malonyl-CoA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009539	photosystem II reaction center
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21251	0.76	Barchart \| Table