Spo16336 (gene)

Overview
NameSpo16336
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGATA transcription factor 15
Locationchr6 : 21267166 .. 21268340 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATCATCATCATTTATCATTTCCCCCCTCTTTTGATCATCTTTCTCTATCCAAAGCAAAATAAATTATAATTTCAATCATGTTGGATTTAAAAGAGGAAGTGAGTATTTTTAAACCCTAAATTGATCAAAAAAATTGTTCTTTTGAAAACCAGTGTTCTAATTTTTGGATTGTTTTTTGTGCAGCAGCAACCCTGTTCAGTCTCGGAATCACACAGTAGTAGCAGCGAATTGCTTAAACGATGTACGGATTGTCAAACCACGGCCACTCCTCTCTGGCGAGGCGGCCCCGCCGGTCCCAAGGTAAACCCCAAACCCTAATTCCTTCACATCTACTTTTCTGCCTCCGCATTGTAAATGATTAATTTGTTTCTATTCTTTCCGCAGACATTGTGTAATGCATGCGGTATCAAGTACCACAAGAAAAGAAGGGCGCTTCTAGGACTAGATAAATCGAAAATAGACAAAAACAACAACAAAAAGAAAACCAACAAGAGTTGCGGCGGCGGAAGTAGTAATAGTAGTGGTAGCAGCAGTAGTAATGGAAGCGAAAGTCGCCATGGAATAACATCGTTGAAGATTAAAATGATGGCTTCAGGAGGAATTAGACAAAGTGGTGAGAAATTAAGAGATAAATTAGGTGAAGTCGAACAAGCGGCTATGCTGTTAATGGCTTTATCTTACGGCTCTGTTTATGCTTAATAACTGAGAGATTTTGGTTTCTTATTCCGATTTTGCCCCTTCTTCAACCTGACTGGACCAACAACAACAACACAATCTTACCCTCTCCCCTTATCTTTATTTTCAAATGTCCGCTCCTTTTTCCGATATTACCCCTGCCTAAAATAGGCTTCAAGTTTTGTGGGGTTGTTCTTTAAGAGTTTTATTTCTCGGATTTTATATTTTATTTATTATTAATTATTATTATTAGTAATAGTAGGGCATTGTTGTAAAAGTAGATAGAGCGTGGTGTTATTTTGACAAATTGGCTAAATTAATCAAAGAATTTTGGCTTGAGTATCTTGATCATATAATGTTTTTCCTTTTTTGTTAATTTTTAATTTTTGCTACTTATGTACATTGTGATAAAATTGTCAAAGTTTACCATAGTTGTCTCAAAATAGATTCATCACAACATTTCATTGTGATCAATATCACTTATGTATTGTCCGTCAG

mRNA sequence

TGATCATCATCATTTATCATTTCCCCCCTCTTTTGATCATCTTTCTCTATCCAAAGCAAAATAAATTATAATTTCAATCATGTTGGATTTAAAAGAGGAACAGCAACCCTGTTCAGTCTCGGAATCACACAGTAGTAGCAGCGAATTGCTTAAACGATGTACGGATTGTCAAACCACGGCCACTCCTCTCTGGCGAGGCGGCCCCGCCGGTCCCAAGACATTGTGTAATGCATGCGGTATCAAGTACCACAAGAAAAGAAGGGCGCTTCTAGGACTAGATAAATCGAAAATAGACAAAAACAACAACAAAAAGAAAACCAACAAGAGTTGCGGCGGCGGAAGTAGTAATAGTAGTGGTAGCAGCAGTAGTAATGGAAGCGAAAGTCGCCATGGAATAACATCGTTGAAGATTAAAATGATGGCTTCAGGAGGAATTAGACAAAGTGGTGAGAAATTAAGAGATAAATTAGGTGAAGTCGAACAAGCGGCTATGCTGTTAATGGCTTTATCTTACGGCTCTGTTTATGCTTAATAACTGAGAGATTTTGGTTTCTTATTCCGATTTTGCCCCTTCTTCAACCTGACTGGACCAACAACAACAACACAATCTTACCCTCTCCCCTTATCTTTATTTTCAAATGTCCGCTCCTTTTTCCGATATTACCCCTGCCTAAAATAGGCTTCAAGTTTTGTGGGGTTGTTCTTTAAGAGTTTTATTTCTCGGATTTTATATTTTATTTATTATTAATTATTATTATTAGTAATAGTAGGGCATTGTTGTAAAAGTAGATAGAGCGTGGTGTTATTTTGACAAATTGGCTAAATTAATCAAAGAATTTTGGCTTGAGTATCTTGATCATATAATGTTTTTCCTTTTTTGTTAATTTTTAATTTTTGCTACTTATGTACATTGTGATAAAATTGTCAAAGTTTACCATAGTTGTCTCAAAATAGATTCATCACAACATTTCATTGTGATCAATATCACTTATGTATTGTCCGTCAG

Coding sequence (CDS)

ATGTTGGATTTAAAAGAGGAACAGCAACCCTGTTCAGTCTCGGAATCACACAGTAGTAGCAGCGAATTGCTTAAACGATGTACGGATTGTCAAACCACGGCCACTCCTCTCTGGCGAGGCGGCCCCGCCGGTCCCAAGACATTGTGTAATGCATGCGGTATCAAGTACCACAAGAAAAGAAGGGCGCTTCTAGGACTAGATAAATCGAAAATAGACAAAAACAACAACAAAAAGAAAACCAACAAGAGTTGCGGCGGCGGAAGTAGTAATAGTAGTGGTAGCAGCAGTAGTAATGGAAGCGAAAGTCGCCATGGAATAACATCGTTGAAGATTAAAATGATGGCTTCAGGAGGAATTAGACAAAGTGGTGAGAAATTAAGAGATAAATTAGGTGAAGTCGAACAAGCGGCTATGCTGTTAATGGCTTTATCTTACGGCTCTGTTTATGCTTAA

Protein sequence

MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16336.1Spo16336.1mRNA


Homology
[Close]
BLAST of Spo16336.1 vs. NCBI nr
Match: gi|902180724|gb|KNA09608.1| (hypothetical protein SOVF_152090 isoform A [Spinacia oleracea])

HSP 1 Score: 285.4 bits (729), Expect = 5.700e-74
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60

Query: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120
           RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR
Sbjct: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120

Query: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           QSGEKLRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 150
[Close]
BLAST of Spo16336.1 vs. NCBI nr
Match: gi|902180725|gb|KNA09609.1| (hypothetical protein SOVF_152090 isoform B [Spinacia oleracea])

HSP 1 Score: 276.6 bits (706), Expect = 2.600e-71
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDL +E+QPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 1   MLDL-KEEQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60

Query: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120
           RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR
Sbjct: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120

Query: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           QSGEKLRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 149
[Close]
BLAST of Spo16336.1 vs. NCBI nr
Match: gi|731346759|ref|XP_010684625.1| (PREDICTED: GATA transcription factor 15-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 193.0 bits (489), Expect = 3.800e-46
Identity = 118/152 (77.63%), Postives = 123/152 (80.92%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEEQ  CSVSES SSS+EL KRCTDCQTT TPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 2   MLDLKEEQ--CSVSESQSSSNEL-KRCTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKKR 61

Query: 61  RALLGLDKSKIDKNNNKKK--TNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGG 120
           RALLGLDK K+DK+NNKKK   NKS       SS  SSSNGS        LKIK+MAS G
Sbjct: 62  RALLGLDKGKVDKHNNKKKMMNNKS-------SSSGSSSNGSLG----IPLKIKVMAS-G 121

Query: 121 IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           IRQ+ E LRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 122 IRQTSENLRDKLGEVEQAAMLLMALSYGSVYA 138
[Close]
BLAST of Spo16336.1 vs. NCBI nr
Match: gi|731346761|ref|XP_010684626.1| (PREDICTED: GATA transcription factor 16-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 190.7 bits (483), Expect = 1.900e-45
Identity = 117/152 (76.97%), Postives = 122/152 (80.26%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEE   CSVSES SSS+EL KRCTDCQTT TPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 2   MLDLKEE---CSVSESQSSSNEL-KRCTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKKR 61

Query: 61  RALLGLDKSKIDKNNNKKK--TNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGG 120
           RALLGLDK K+DK+NNKKK   NKS       SS  SSSNGS        LKIK+MAS G
Sbjct: 62  RALLGLDKGKVDKHNNKKKMMNNKS-------SSSGSSSNGSLG----IPLKIKVMAS-G 121

Query: 121 IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           IRQ+ E LRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 122 IRQTSENLRDKLGEVEQAAMLLMALSYGSVYA 137
[Close]
BLAST of Spo16336.1 vs. NCBI nr
Match: gi|661874905|emb|CDP20385.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 132.5 bits (332), Expect = 6.200e-28
Identity = 87/160 (54.37%), Postives = 106/160 (66.25%), Query Frame = 1 

		  

Query: 2   LDLKEEQQPCSVSESHSSSS--------ELLKRCTDCQTTATPLWRGGPAGPKTLCNACG 61
           +DLKEE++  S +   SSSS        + LK C+DC TT TPLWRGGPAGPK+LCNACG
Sbjct: 1   MDLKEEKRSDSENAKRSSSSSSPSASGSKQLKSCSDCHTTRTPLWRGGPAGPKSLCNACG 60

Query: 62  IKYHKKRRALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKM 121
           IKY+KKRR LLGLD+ + DK    KK  KS GGG+ ++ G              SL++K+
Sbjct: 61  IKYNKKRRELLGLDRGRNDKG---KKKRKSSGGGNKSNEGGGVGQ---------SLRMKL 120

Query: 122 MASGG---IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           MA GG   +R+SG KL  KL E EQAA+LLMALS GSVYA
Sbjct: 121 MALGGDMVLRRSG-KLMGKLREEEQAAILLMALSCGSVYA 147
[Close]
BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSF5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_152090 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.000e-74
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60

Query: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120
           RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR
Sbjct: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120

Query: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           QSGEKLRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 150
[Close]
BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQS0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_152090 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.800e-71
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDL +E+QPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 1   MLDL-KEEQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60

Query: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120
           RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR
Sbjct: 61  RALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIR 120

Query: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           QSGEKLRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 121 QSGEKLRDKLGEVEQAAMLLMALSYGSVYA 149
[Close]
BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERX2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165180 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.700e-46
Identity = 118/152 (77.63%), Postives = 123/152 (80.92%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEEQ  CSVSES SSS+EL KRCTDCQTT TPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 2   MLDLKEEQ--CSVSESQSSSNEL-KRCTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKKR 61

Query: 61  RALLGLDKSKIDKNNNKKK--TNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGG 120
           RALLGLDK K+DK+NNKKK   NKS       SS  SSSNGS        LKIK+MAS G
Sbjct: 62  RALLGLDKGKVDKHNNKKKMMNNKS-------SSSGSSSNGSLG----IPLKIKVMAS-G 121

Query: 121 IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           IRQ+ E LRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 122 IRQTSENLRDKLGEVEQAAMLLMALSYGSVYA 138
[Close]
BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWA2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165180 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.300e-45
Identity = 117/152 (76.97%), Postives = 122/152 (80.26%), Query Frame = 1 

		  

Query: 1   MLDLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKR 60
           MLDLKEE   CSVSES SSS+EL KRCTDCQTT TPLWRGGPAGPKTLCNACGIKYHKKR
Sbjct: 2   MLDLKEE---CSVSESQSSSNEL-KRCTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKKR 61

Query: 61  RALLGLDKSKIDKNNNKKK--TNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGG 120
           RALLGLDK K+DK+NNKKK   NKS       SS  SSSNGS        LKIK+MAS G
Sbjct: 62  RALLGLDKGKVDKHNNKKKMMNNKS-------SSSGSSSNGSLG----IPLKIKVMAS-G 121

Query: 121 IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           IRQ+ E LRDKLGEVEQAAMLLMALSYGSVYA
Sbjct: 122 IRQTSENLRDKLGEVEQAAMLLMALSYGSVYA 137
[Close]
BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Match: A0A068VHS2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012611001 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.300e-28
Identity = 87/160 (54.37%), Postives = 106/160 (66.25%), Query Frame = 1 

		  

Query: 2   LDLKEEQQPCSVSESHSSSS--------ELLKRCTDCQTTATPLWRGGPAGPKTLCNACG 61
           +DLKEE++  S +   SSSS        + LK C+DC TT TPLWRGGPAGPK+LCNACG
Sbjct: 1   MDLKEEKRSDSENAKRSSSSSSPSASGSKQLKSCSDCHTTRTPLWRGGPAGPKSLCNACG 60

Query: 62  IKYHKKRRALLGLDKSKIDKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKM 121
           IKY+KKRR LLGLD+ + DK    KK  KS GGG+ ++ G              SL++K+
Sbjct: 61  IKYNKKRRELLGLDRGRNDKG---KKKRKSSGGGNKSNEGGGVGQ---------SLRMKL 120

Query: 122 MASGG---IRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           MA GG   +R+SG KL  KL E EQAA+LLMALS GSVYA
Sbjct: 121 MALGGDMVLRRSG-KLMGKLREEEQAAILLMALSCGSVYA 147
[Close]
BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.800e-19
Identity = 64/139 (46.04%), Postives = 79/139 (56.83%), Query Frame = 1 

		  

Query: 13  VSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKID 72
           + ++++S ++  K C DC T+ TPLWRGGP GPK+LCNACGI+  KKRR           
Sbjct: 24  IEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRR----------- 83

Query: 73  KNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASG-GIRQSGEKLRDKLG 132
                       GG   N     SS+G  +R    SLK  +M  G   R + EK R KLG
Sbjct: 84  ------------GGTEDNKKLKKSSSGGGNRKFGESLKQSLMDLGIRKRSTVEKQRQKLG 139

Query: 133 EVEQAAMLLMALSYGSVYA 151
           E EQAA+LLMALSYGSVYA
Sbjct: 144 EEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.700e-17
Identity = 70/174 (40.23%), Postives = 88/174 (50.57%), Query Frame = 1 

		  

Query: 3   DLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRA 62
           D+  E    S S   SSS +  + C DC T  TPLWRGGPAGPK+LCNACGIK  KKR+A
Sbjct: 20  DVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA 79

Query: 63  LLGLDKSKIDKNNNKKKTNKSCGGGSSNS--------------------------SGSSS 122
            LG+ +S+  K N K   N        N+                          S SSS
Sbjct: 80  ALGM-RSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSS 139

Query: 123 SNGSESRHGITSLKIKMMASGGIRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           SN   S+      K+ +M    + +  ++L  KLGE E+AA+LLMALS  SVYA
Sbjct: 140 SNKGVSKFLDLGFKVPVMKRSAVEK--KRLWRKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Match: GAT15_ARATH (GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.000e-14
Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1 

		  

Query: 12  SVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKI 71
           S S S+ + S   K C  C T+ TPLWRGGPAGPK+LCNACGI+  KKRR L+       
Sbjct: 28  SSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLIS------ 87

Query: 72  DKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIRQSGEKLRDKLG 131
           +++ +KKK           S   +   G   +  +  L  ++M      ++  + R+KLG
Sbjct: 88  NRSEDKKK----------KSHNRNPKFGDSLKQRLMELGREVMMQRSTAEN--QRRNKLG 147

Query: 132 EVEQAAMLLMALSY-GSVYA 151
           E EQAA+LLMALSY  SVYA
Sbjct: 148 EEEQAAVLLMALSYASSVYA 149
[Close]
BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 8.900e-11
Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1 

		  

Query: 24 LKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRA-LLGLDKSKIDKNNNKKKTN 82
          ++ C++C+TT TP+WRGGP GPK+LCNACGI++ K+RR+ LLG+   +  K+   KK N
Sbjct: 25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIHIIRSHKSLASKKIN 83
[Close]
BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.600e-10
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 1 

		  

Query: 23  LLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALL 65
           +++ C+DC TT TPLWR GP GPK+LCNACGI+  K RRA +
Sbjct: 197 VIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 238
[Close]
BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Match: AT5G49300.1 (GATA transcription factor 16)

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-20
Identity = 64/139 (46.04%), Postives = 79/139 (56.83%), Query Frame = 1 

		  

Query: 13  VSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKID 72
           + ++++S ++  K C DC T+ TPLWRGGP GPK+LCNACGI+  KKRR           
Sbjct: 24  IEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRR----------- 83

Query: 73  KNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASG-GIRQSGEKLRDKLG 132
                       GG   N     SS+G  +R    SLK  +M  G   R + EK R KLG
Sbjct: 84  ------------GGTEDNKKLKKSSSGGGNRKFGESLKQSLMDLGIRKRSTVEKQRQKLG 139

Query: 133 EVEQAAMLLMALSYGSVYA 151
           E EQAA+LLMALSYGSVYA
Sbjct: 144 EEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Match: AT3G16870.1 (GATA transcription factor 17)

HSP 1 Score: 89.4 bits (220), Expect = 2.100e-18
Identity = 70/174 (40.23%), Postives = 88/174 (50.57%), Query Frame = 1 

		  

Query: 3   DLKEEQQPCSVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRA 62
           D+  E    S S   SSS +  + C DC T  TPLWRGGPAGPK+LCNACGIK  KKR+A
Sbjct: 20  DVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA 79

Query: 63  LLGLDKSKIDKNNNKKKTNKSCGGGSSNS--------------------------SGSSS 122
            LG+ +S+  K N K   N        N+                          S SSS
Sbjct: 80  ALGM-RSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSS 139

Query: 123 SNGSESRHGITSLKIKMMASGGIRQSGEKLRDKLGEVEQAAMLLMALSYGSVYA 151
           SN   S+      K+ +M    + +  ++L  KLGE E+AA+LLMALS  SVYA
Sbjct: 140 SNKGVSKFLDLGFKVPVMKRSAVEK--KRLWRKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Match: AT3G06740.1 (GATA transcription factor 15)

HSP 1 Score: 81.3 bits (199), Expect = 5.700e-16
Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1 

		  

Query: 12  SVSESHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKI 71
           S S S+ + S   K C  C T+ TPLWRGGPAGPK+LCNACGI+  KKRR L+       
Sbjct: 28  SSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLIS------ 87

Query: 72  DKNNNKKKTNKSCGGGSSNSSGSSSSNGSESRHGITSLKIKMMASGGIRQSGEKLRDKLG 131
           +++ +KKK           S   +   G   +  +  L  ++M      ++  + R+KLG
Sbjct: 88  NRSEDKKK----------KSHNRNPKFGDSLKQRLMELGREVMMQRSTAEN--QRRNKLG 147

Query: 132 EVEQAAMLLMALSY-GSVYA 151
           E EQAA+LLMALSY  SVYA
Sbjct: 148 EEEQAAVLLMALSYASSVYA 149
[Close]
BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.600e-13
Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 1 

		  

Query: 16 SHSSSSELLKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRALLGLDKSKIDKNN 75
          S  S  +  K C DC T+ TPLWRGGPAGPK+LCNACGIK  KKR+A LG+ +  I    
Sbjct: 28 SSGSGGDTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDI---K 87

Query: 76 NKKKTNKSCGGGSSN 91
           K K+N + G  S N
Sbjct: 88 IKSKSNNNLGLESRN 99
[Close]
BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Match: AT5G26930.1 (GATA transcription factor 23)

HSP 1 Score: 68.2 bits (165), Expect = 5.000e-12
Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1 

		  

Query: 24 LKRCTDCQTTATPLWRGGPAGPKTLCNACGIKYHKKRRA-LLGLDKSKIDKNNNKKKTN 82
          ++ C++C+TT TP+WRGGP GPK+LCNACGI++ K+RR+ LLG+   +  K+   KK N
Sbjct: 25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIHIIRSHKSLASKKIN 83
The following BLAST results are available for this feature:
BLAST of Spo16336.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180724|gb|KNA09608.1|5.7e-74100.hypothetical protein SOVF_1520... [more]
gi|902180725|gb|KNA09609.1|2.6e-7198.0hypothetical protein SOVF_1520... [more]
gi|731346759|ref|XP_010684625.1|3.8e-4677.6PREDICTED: GATA transcription ... [more]
gi|731346761|ref|XP_010684626.1|1.9e-4576.9PREDICTED: GATA transcription ... [more]
gi|661874905|emb|CDP20385.1|6.2e-2854.3unnamed protein product [Coffe... [more]
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BLAST of Spo16336.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSF5_SPIOL4.0e-74100.Uncharacterized protein OS=Spi... [more]
A0A0K9QQS0_SPIOL1.8e-7198.0Uncharacterized protein OS=Spi... [more]
A0A0J8ERX2_BETVU2.7e-4677.6Uncharacterized protein OS=Bet... [more]
A0A0J8BWA2_BETVU1.3e-4576.9Uncharacterized protein OS=Bet... [more]
A0A068VHS2_COFCA4.3e-2854.3Uncharacterized protein OS=Cof... [more]
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BLAST of Spo16336.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GAT16_ARATH1.8e-1946.0GATA transcription factor 16 O... [more]
GAT17_ARATH3.7e-1740.2GATA transcription factor 17 O... [more]
GAT15_ARATH1.0e-1442.1GATA transcription factor 15 O... [more]
GAT23_ARATH8.9e-1152.5GATA transcription factor 23 O... [more]
GAT22_ARATH2.6e-1061.9Putative GATA transcription fa... [more]
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BLAST of Spo16336.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G49300.11.0e-2046.0GATA transcription factor 16[more]
AT3G16870.12.1e-1840.2GATA transcription factor 17[more]
AT3G06740.15.7e-1642.1GATA transcription factor 15[more]
AT4G16141.11.6e-1353.3GATA type zinc finger transcri... [more]
AT5G26930.15.0e-1252.5GATA transcription factor 23[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 27..61
score: 5.4
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 21..80
score: 4.3
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 27..52
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 25..56
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 26..61
score: 1.6
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 15..77
score: 2.4
NoneNo IPR availablePANTHERPTHR10071:SF178SUBFAMILY NOT NAMEDcoord: 15..77
score: 2.4
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 22..61
score: 3.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0001510 RNA methylation
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009658 chloroplast organization
biological_process GO:0044238 primary metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0006334 nucleosome assembly
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006412 translation
biological_process GO:0051604 protein maturation
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0090351 seedling development
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0042545 cell wall modification
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005618 cell wall
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043021 ribonucleoprotein complex binding
RNA-Seq Expression