Spo16303 (gene)

Overview
NameSpo16303
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA07g17560D protein
Locationchr3 : 32928001 .. 32928414 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGAGTTAAAGGAAAAGGCAAGAAGCAGACCGTGTTTACAGCTAAAGATGATGTAGAGAACGCGAAAGGGGAGAACATTGAGGCATCTAAGAGAAGGGGAAGGCCACAGAAATCATTGAAGGAAGAGGTTGGAGATGAAGAGTTTGAGAAAATAGTGAATTTTGATGAAAATGCTAATAGTTCAATAACAAGTAGAAGCTCAAAAGGTGAAATTACTGCTATGAATGGAACAAAAAGGAAGAGGCCGTCACAAGTGAAGGAGAATTCAGATACTGCCGAGGTGGAAAATGGTTCAGAAGCCAATTCTAGTACTGAGGGCTTTGTGAAATCTGTAGGGTTTAGACAAAATGGAAGCAGGAGAAAAAGCAAGCCTCACCGAGCTGCTGAAGTTGGAGTAAAATGCAAATGA

mRNA sequence

ATGGGTAGAGTTAAAGGAAAAGGCAAGAAGCAGACCGTGTTTACAGCTAAAGATGATGTAGAGAACGCGAAAGGGGAGAACATTGAGGCATCTAAGAGAAGGGGAAGGCCACAGAAATCATTGAAGGAAGAGGTTGGAGATGAAGAGTTTGAGAAAATAGTGAATTTTGATGAAAATGCTAATAGTTCAATAACAAGTAGAAGCTCAAAAGGTGAAATTACTGCTATGAATGGAACAAAAAGGAAGAGGCCGTCACAAGTGAAGGAGAATTCAGATACTGCCGAGGTGGAAAATGGTTCAGAAGCCAATTCTAGTACTGAGGGCTTTGTGAAATCTGTAGGGTTTAGACAAAATGGAAGCAGGAGAAAAAGCAAGCCTCACCGAGCTGCTGAAGTTGGAGTAAAATGCAAATGA

Coding sequence (CDS)

ATGGGTAGAGTTAAAGGAAAAGGCAAGAAGCAGACCGTGTTTACAGCTAAAGATGATGTAGAGAACGCGAAAGGGGAGAACATTGAGGCATCTAAGAGAAGGGGAAGGCCACAGAAATCATTGAAGGAAGAGGTTGGAGATGAAGAGTTTGAGAAAATAGTGAATTTTGATGAAAATGCTAATAGTTCAATAACAAGTAGAAGCTCAAAAGGTGAAATTACTGCTATGAATGGAACAAAAAGGAAGAGGCCGTCACAAGTGAAGGAGAATTCAGATACTGCCGAGGTGGAAAATGGTTCAGAAGCCAATTCTAGTACTGAGGGCTTTGTGAAATCTGTAGGGTTTAGACAAAATGGAAGCAGGAGAAAAAGCAAGCCTCACCGAGCTGCTGAAGTTGGAGTAAAATGCAAATGA

Protein sequence

MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGSRRKSKPHRAAEVGVKCK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16303.1Spo16303.1mRNA


Homology
BLAST of Spo16303.1 vs. NCBI nr
Match: gi|902225059|gb|KNA19947.1| (hypothetical protein SOVF_056810 [Spinacia oleracea])

HSP 1 Score: 255.0 bits (650), Expect = 7.500e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60
           MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA
Sbjct: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60

Query: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120
           NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS
Sbjct: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120

Query: 121 RRKSKPHRAAEVGVKCK 138
           RRKSKPHRAAEVGVKCK
Sbjct: 121 RRKSKPHRAAEVGVKCK 137

BLAST of Spo16303.1 vs. NCBI nr
Match: gi|731324153|ref|XP_010672817.1| (PREDICTED: uncharacterized protein LOC104889319 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 8.100e-35
Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60
           MG+ +GK KKQTV TA+ DV N K E I ASK RGRPQK  K+EV DEE EKI N D+N 
Sbjct: 1   MGKRRGKSKKQTVVTAQHDVGNVKEEKIRASKSRGRPQKPFKDEVVDEEIEKIANGDDNG 60

Query: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120
            SSI ++SSK +I A NG KRKR +QV ENSD  + +NG+E+    +  V+SVGFRQNGS
Sbjct: 61  KSSIENKSSKCQIIAENGAKRKRSTQVNENSDVVKDDNGAESKCIADNCVRSVGFRQNGS 120

Query: 121 RRKSKPHRAAEVGVKCK 138
           RRKSKPHRAAEVGV+CK
Sbjct: 121 RRKSKPHRAAEVGVECK 137

BLAST of Spo16303.1 vs. NCBI nr
Match: gi|147864059|emb|CAN83221.1| (hypothetical protein VITISV_031365 [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 3.100e-26
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD--- 60
           MGR +GKGKKQTV   +DD  + + E I A KRRGRPQK +K++V +EE  + V  +   
Sbjct: 118 MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 177

Query: 61  ENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQ 120
           EN    ITS+ +K + T  NG KRKR  Q KENSD+ + ENG+E  S+    +KSVGFRQ
Sbjct: 178 ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNND-LKSVGFRQ 237

Query: 121 NGSRRKSKPHRAAEVGVKCK 138
           NGSRRK+KP RAAE GV+CK
Sbjct: 238 NGSRRKNKPRRAAEAGVECK 256

BLAST of Spo16303.1 vs. NCBI nr
Match: gi|225441405|ref|XP_002278550.1| (PREDICTED: uncharacterized protein LOC100248625 [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 3.100e-26
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD--- 60
           MGR +GKGKKQTV   +DD  + + E I A KRRGRPQK +K++V +EE  + V  +   
Sbjct: 1   MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 60

Query: 61  ENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQ 120
           EN    ITS+ +K + T  NG KRKR  Q KENSD+ + ENG+E  S+    +KSVGFRQ
Sbjct: 61  ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNND-LKSVGFRQ 120

Query: 121 NGSRRKSKPHRAAEVGVKCK 138
           NGSRRK+KP RAAE GV+CK
Sbjct: 121 NGSRRKNKPRRAAEAGVECK 139

BLAST of Spo16303.1 vs. NCBI nr
Match: gi|703065085|ref|XP_010087361.1| (hypothetical protein L484_018387 [Morus notabilis])

HSP 1 Score: 126.7 bits (317), Expect = 3.100e-26
Identity = 79/138 (57.25%), Postives = 94/138 (68.12%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD-EN 60
           MGR +GKGK+ TV T  DD  + + E I A KRRGRPQK LK+E+ DEE EKI   D EN
Sbjct: 1   MGRGRGKGKRLTV-TNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEVEKIEEDDSEN 60

Query: 61  ANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNG 120
           A + I ++ +K    A NG KRKR SQ KE SD+ + ENG+   SST+   KS GFR NG
Sbjct: 61  AKAGIPTKEAKSPSAAENGKKRKRYSQAKEKSDSVKEENGNGTRSSTDESTKSNGFRHNG 120

Query: 121 SRRKSKPHRAAEVGVKCK 138
           SRRKSKP RAAE GV+CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RM68_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056810 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.200e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60
           MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA
Sbjct: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60

Query: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120
           NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS
Sbjct: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120

Query: 121 RRKSKPHRAAEVGVKCK 138
           RRKSKPHRAAEVGVKCK
Sbjct: 121 RRKSKPHRAAEVGVKCK 137

BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTF5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060440 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.600e-35
Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60
           MG+ +GK KKQTV TA+ DV N K E I ASK RGRPQK  K+EV DEE EKI N D+N 
Sbjct: 1   MGKRRGKSKKQTVVTAQHDVGNVKEEKIRASKSRGRPQKPFKDEVVDEEIEKIANGDDNG 60

Query: 61  NSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNGS 120
            SSI ++SSK +I A NG KRKR +QV ENSD  + +NG+E+    +  V+SVGFRQNGS
Sbjct: 61  KSSIENKSSKCQIIAENGAKRKRSTQVNENSDVVKDDNGAESKCIADNCVRSVGFRQNGS 120

Query: 121 RRKSKPHRAAEVGVKCK 138
           RRKSKPHRAAEVGV+CK
Sbjct: 121 RRKSKPHRAAEVGVECK 137

BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Match: W9QYA2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018387 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.200e-26
Identity = 79/138 (57.25%), Postives = 94/138 (68.12%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD-EN 60
           MGR +GKGK+ TV T  DD  + + E I A KRRGRPQK LK+E+ DEE EKI   D EN
Sbjct: 1   MGRGRGKGKRLTV-TNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEVEKIEEDDSEN 60

Query: 61  ANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQNG 120
           A + I ++ +K    A NG KRKR SQ KE SD+ + ENG+   SST+   KS GFR NG
Sbjct: 61  AKAGIPTKEAKSPSAAENGKKRKRYSQAKEKSDSVKEENGNGTRSSTDESTKSNGFRHNG 120

Query: 121 SRRKSKPHRAAEVGVKCK 138
           SRRKSKP RAAE GV+CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Match: F6HLK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06280 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.200e-26
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD--- 60
           MGR +GKGKKQTV   +DD  + + E I A KRRGRPQK +K++V +EE  + V  +   
Sbjct: 53  MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 112

Query: 61  ENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQ 120
           EN    ITS+ +K + T  NG KRKR  Q KENSD+ + ENG+E  S+    +KSVGFRQ
Sbjct: 113 ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNND-LKSVGFRQ 172

Query: 121 NGSRRKSKPHRAAEVGVKCK 138
           NGSRRK+KP RAAE GV+CK
Sbjct: 173 NGSRRKNKPRRAAEAGVECK 191

BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Match: A5BGN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031365 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.200e-26
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFD--- 60
           MGR +GKGKKQTV   +DD  + + E I A KRRGRPQK +K++V +EE  + V  +   
Sbjct: 118 MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 177

Query: 61  ENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKSVGFRQ 120
           EN    ITS+ +K + T  NG KRKR  Q KENSD+ + ENG+E  S+    +KSVGFRQ
Sbjct: 178 ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNND-LKSVGFRQ 237

Query: 121 NGSRRKSKPHRAAEVGVKCK 138
           NGSRRK+KP RAAE GV+CK
Sbjct: 238 NGSRRKNKPRRAAEAGVECK 256

BLAST of Spo16303.1 vs. TAIR (Arabidopsis)
Match: AT3G57930.1 (unknown protein)

HSP 1 Score: 91.3 bits (225), Expect = 5.100e-19
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIV------ 60
           M R +GKGK+Q   TA++D  + + E I A ++RGRPQK +K+E  +EE E++V      
Sbjct: 1   MRRGRGKGKRQNA-TAREDRGSGEEEKIPAFRKRGRPQKPVKDE--EEEEEELVKKTDEE 60

Query: 61  -NFDENANSSITSRSSKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVK-- 120
            + D++ N S+TS+ +  E    NG KRK+P + KE++ T E ENG  + SSTE  +K  
Sbjct: 61  EDKDDDTNGSVTSKENVTE----NGRKRKKPVESKESNITEE-ENGVGSKSSTEDSMKSS 120

Query: 121 -SVGFRQNGSRRKSKPHRAAEVGVKC 137
            S+GFRQNGSRRK+KP RAAE  V+C
Sbjct: 121 SSIGFRQNGSRRKNKPRRAAEAVVEC 138

BLAST of Spo16303.1 vs. TAIR (Arabidopsis)
Match: AT2G42190.1 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 9.900e-15
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 1

		  

Query: 1   MGRVKGKGKKQTVFTAKDDVENAKGENIEASKRRGRPQKSLKEEVGDEEFEKIVNFDENA 60
           M R +GKGKKQ   +A++D  +   E I A +RRGRPQK +K++  +EE E      E  
Sbjct: 1   MRRGRGKGKKQNA-SAREDRGSGDEEKIPAYRRRGRPQKPMKDDFEEEEEEDDEEMVEKM 60

Query: 61  NSSITSRS-SKGEITAMNGTKRKRPSQVKENSDTAEVENGSEANSSTEGFVKS--VGFRQ 120
                      G +T+ +  +RKR      N+D  E ENG  +  +T+   +S  +GFRQ
Sbjct: 61  EVEDEDEEIDDGSVTSKDLKERKRKMSNGSNTDLTEEENGLGSKPNTDDSTRSTSIGFRQ 120

Query: 121 NGSRRKSKPHRAAEVGVKC 137
           NGSRRKSKP RAAE  V+C
Sbjct: 121 NGSRRKSKPRRAAEAVVEC 138

The following BLAST results are available for this feature:
BLAST of Spo16303.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902225059|gb|KNA19947.1|7.5e-65100.hypothetical protein SOVF_0568... [more]
gi|731324153|ref|XP_010672817.1|8.1e-3563.5PREDICTED: uncharacterized pro... [more]
gi|147864059|emb|CAN83221.1|3.1e-2654.2hypothetical protein VITISV_03... [more]
gi|225441405|ref|XP_002278550.1|3.1e-2654.2PREDICTED: uncharacterized pro... [more]
gi|703065085|ref|XP_010087361.1|3.1e-2657.2hypothetical protein L484_0183... [more]
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BLAST of Spo16303.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RM68_SPIOL5.2e-65100.Uncharacterized protein OS=Spi... [more]
A0A0J8CTF5_BETVU5.6e-3563.5Uncharacterized protein OS=Bet... [more]
W9QYA2_9ROSA2.2e-2657.2Uncharacterized protein OS=Mor... [more]
F6HLK3_VITVI2.2e-2654.2Putative uncharacterized prote... [more]
A5BGN7_VITVI2.2e-2654.2Putative uncharacterized prote... [more]
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BLAST of Spo16303.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16303.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G57930.15.1e-1946.5unknown protein[more]
AT2G42190.19.9e-1541.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34055FAMILY NOT NAMEDcoord: 1..137
score: 2.1
NoneNo IPR availablePANTHERPTHR34055:SF4EXPRESSED PROTEINcoord: 1..137
score: 2.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016049 cell growth
biological_process GO:0016197 endosomal transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006869 lipid transport
biological_process GO:0010351 lithium ion transport
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0016567 protein ubiquitination
biological_process GO:0000902 cell morphogenesis
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031902 late endosome membrane
cellular_component GO:0005795 Golgi stack
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0005483 soluble NSF attachment protein activity
molecular_function GO:0016881 acid-amino acid ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
RNA-Seq Expression
   



Co-expression