Spo16302 (gene)

Overview
NameSpo16302
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 32948053 .. 32948832 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGTAATTTGGATTCCTGTTGCATAAAATGTTATGTTTCCCTTGTTTATCCTTATTGCTATACCCTGTTTAAGTGTTTAGTTATCAACAACCCAAGCAAGTCAAGCTTCTTTATATCCTCTAAGGTTATGATATTACCTTACTTATTTCAATTTCTTTTGGGTGGATAAAATATCCTCCATATTAGCCCATGTCTTCCATGTAATTATTCTTTTGGCCAGTGCATCTTTGCATGGATTAAGATTCTCAGCAGATGAGGCCATTTGGTCTATTATGCATGAACATTTGATGACTTAATTGCAGGTAAATTGTGATATTACTCATTTGTGCAGAGTAAGTTTGTAATGGTGGTAGGAATGCTGTTTGGATTTCCACAGTTTTTAAACTTGATCATGGAGGAGTCTAAAAAACAAGACTGGACGATAGAGTTCGAATTAGTAATGCTGTACTTACAGCATTGCTAATGACCTTGTGTCCTGTTAGAACTGCTTACAGCATTGATTGTATGAGGTATTTCTAAGCTAAGTAAATATATTAACTAATCTCCACTCTCTGCAGAACAGATTAGATATGCCTTGAATACACTTTGAGATGCTTGGTTTTGAATGTATGTGCAGGTCTTGACGAAAATTAAAGAATAGAGCTACTGACCACAAGGCATCGACGAAGCCTATCTTGATGGTAATCCATTTCAATGTCTTGACGTTAGGAGCAGATCTGATGACCATTTCAATATAACTTCATATTACATGTTGCTTAGTCCATATCTCAGCTGA

mRNA sequence

ATGAATCGTAATTTGGATTCCTGTTGCATAAAATGTTATGTTTCCCTTGTTTATCCTTATTGCTATACCCTGTTTAAGTGTTTAGTTATCAACAACCCAAGCAAGTCAAGCTTCTTTATATCCTCTAAGGTTATGATATTACCTTACTTATTTCAATTTCTTTTGGCATTGCTAATGACCTTGTGTCCTGTTAGAACTGCTTACAGCATTGATTGTATGAGGAGCAGATCTGATGACCATTTCAATATAACTTCATATTACATGTTGCTTAGTCCATATCTCAGCTGA

Coding sequence (CDS)

ATGAATCGTAATTTGGATTCCTGTTGCATAAAATGTTATGTTTCCCTTGTTTATCCTTATTGCTATACCCTGTTTAAGTGTTTAGTTATCAACAACCCAAGCAAGTCAAGCTTCTTTATATCCTCTAAGGTTATGATATTACCTTACTTATTTCAATTTCTTTTGGCATTGCTAATGACCTTGTGTCCTGTTAGAACTGCTTACAGCATTGATTGTATGAGGAGCAGATCTGATGACCATTTCAATATAACTTCATATTACATGTTGCTTAGTCCATATCTCAGCTGA

Protein sequence

MNRNLDSCCIKCYVSLVYPYCYTLFKCLVINNPSKSSFFISSKVMILPYLFQFLLALLMTLCPVRTAYSIDCMRSRSDDHFNITSYYMLLSPYLS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16302.1Spo16302.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo16302.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16302.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16302.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16302.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0071704 organic substance metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016779 nucleotidyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo139000.66Barchart | Table