Spo16293 (gene) | SpinachBase

Overview


Name	Spo16293
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cornichon family protein
Location	SpoScf_01831 : 23424 .. 33216 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGCCAATAATAGAAATTGACCGGGCGGAGCTGCAACTGCGGTTGAACTTACAACCGAACTGTAACGGAAAAACATTCTCTCTTCTGCTGCAATTTCCACCTCCTTTTCTCCGCATACTTTCCCAATTTTCTCTTCTGCAACTTTTCCCCCTCCTCACTATCATCACTTCAAGCCCCAATTAAGTTGTTCAGTATCAATCTTCACTGAAACCATGCATTGGGACTTAATCTTATGGCTAATTTCCCTAATCTCCAACATCGTTCTCCTCGTTCTCCTCATCTACCAGGTTTACTCCGATTTCTGTAAACCCTAATTCTCCAACTTTTGATGTTGCCCAAGTTTTCTTTAATTTTAGTGCTTATTTTAATACATTGTGAATTTGCGATTTATGTTAGCTGATATGTTTGTCGGATTTGGAGGCGGATTATATGAATCCATACGAAACGGCAGCGAATATCAATTCTTTGATTTTACCAGAGTTTGGATTGCAGGCAGCTTTCTGTGCTCTTTTTCTTGTTACAGGCCATTTCTTCATGTTTCTCGTCACTCTTCCTGTCGCCATTTATCATGCAAGATTGTAAGTACCACTTAAGTTGGTTCCGTATTTATATCTGATTTTTAATGAGTGGTTGTTGTTATGCTTTTGTTTTATTGGTAGTTTAACTTCATGTTTTGGATTGTATTTGTTAAAATATACCCTAGAATATAGGGTATGGTGGGAGGTGTGGGGCGGAACTGAACAGCTGAAGGGGTTTTCGTAAGAGCAGGGTTCATGATGGACAGTGCACAGGTTAGTGCGTTTGGAAGACTTGTTGTGGATTGTAAGTTTTCGTTAGGGTTATAAAATGAGTATAATTGCCGAATATCTAATTGGGATTTACTGAGGAGGTGAGGGGGCGAAACGGCTGAAGGAGATTTGTAAAAGCGGAGTTGATGGTTAAAAAGTGGGTAGGTTCAAGTTCATTTGGAAGACATGATGTGGTTATTAATTTTCTTTAGGTTTTATGAATGACTAGAATTGCCGAATATCCAAGTATCCAACTGGACTTGGCTAAGAAGGTGAGGGGGTGGGGGACTGTAGAAGGGGGTTCCGTTAGAGCAAAGTTAATAGATGGACAATGCACACGAAGTTGATAGATGGACAATGCACAATTAAGTGTGTTTGGAAGACTTGGTGTGGTTTATTAATTTTCTTTAAGGTTTATCAATGAGTAGAATTGTTAATAATCTGTTGGTCATGCCAAGGAGTTTATGTGTTGGGTTCTATGTTGATGAGTGACAAGTGAGACTCGAGTTTGATTTTGGTTTTACACCCGGTTCAGTTGCATAAGTTTTGACATATATTATATATACACTTATACTACGTAAGAATGAAGACGGAATATTTTGTCACTACTAAAGTGTGGATTAATGATTAAAAGGCTATTTTCTTGAGGATTTTTTGGTGGGTGCATGGGGATGTTCCTGACGTATATCGACTTACCATGTGGTAAAACCTAGAACAAAAAAAAAGATAAATATACCTACGATGGACTATCTTTTAAAATCAAATATGGCCTGTTTGTTTGATGTTCGAGTTAGTGGTAGGTATGATTCTATATTGACAAGGGAAAAAAGGATTGAGGATGACATGATTGATTATGCCCTCAGTAGTAATAGAGGAATAGAGGAATAGAGAGTACAATTAAGCTTGGTGCTAGCTTAAGTCAAAATTGTTGATTGTATGCGGGATCCCCTTAGATGATCTAGGCCGCACGCACGCTACACTAATTTTGATAGTGCATGGGGGTGATCTTGATGTATATCTTTTGTATACATGTATAGCCTTTCTGTACAAGTTGACATCAATGCAATTTTGAACTTTTAAAGTTAAATCGGTTCAGTGTATGCTACTATGCTAGCATACGATAGGGAAAAGCGCCTTTTTATTTGCCTAAGGGAGGTGATGTGTGCAATTTCATGGTTCTTCTTATATTAGTGTTTGTGTGTCGTTTCTTTTAGCTAGCACGTTTTTTACACTGATTTGGTGTGGGTTTTTCGTGGTTTTAACTCCTGGTTCAGTCAAGAATTGGTTTTCATGCATTTCAATTCTCAACTCGTTTAGGATTTGCCTTTTGTCATTTTCAATCCCTACTTTGTTTAGAATTTGTTTTTAGTTTTCTCGTTCCTAATTAAGTCATGATTTGTTTTTCATTTCCTAGTTTCTTTAAGATTTTTTTTGTTTATGGGTCAAAGTTTGACTTGATCGAGACTTGTTTTAGGTTTCTTTTGATGCGTGTTTTAGTAGTCATATAATTCTTTTTGACATGAGTTTGTAAGCCTATTTAAAGGCCACAAAATTATGAAGAAAAGAAAAGAGTTTTGTTGAGAATTATTATTCTTATTTATGAGCTTTGCTATCACAGGTTAAGTTAAAAACCAAACACAAACCATGAATTTTGTGCCCTCAATAACGCGACTATTGAGATCTATCTAATGATTTCCATCCTTCACCTTATCCCACGTCCATAATCCATCTGAGTTCTGAGTTCTTAGTTCTGAGTTCTTAGTTCTGAGTTCTTGTTCGTTTGATTCAATTTCAAATTTGTTACTTTGTTTCATAAAAATCGTTGTTTGGATCTCTTTTTGTTGAGTGCACTTTTTCTTTGAGTGGTCTGATACCAATTGATGTGAACTTAAAGGGTAAAAACTTTCACTCAAGGAATACAGATCCAAACAACGATTCTTTTGTGATAGGATTTGATTAACGTTTTTGTTGATTTTGTCTTGTAAGATTTGTAACTCCTCCAATAACTAGTTTGAGAAGAGCCCTCCTCCACTCCCCTATGCACGGGTTCTAAGGACATTTAAGGTTCCAAAGAAAGTGAATGCTGTAAAAGTTATTGTTTGAGTGACAATGATGGATACATACAATCAACTCCAAATTGTACATCTAGAGATCAATTAGATTTATCTCCAAAGTGTTCACTATATGTTGTAAAATTGGCAATAAAGGTTGATATTTAACTATTCATTGAAAGTTGGGCACTTCTTTGCAGCAGACATTTTTCTTTTGCAATGGACAGGGAATTTTGGAACTTTTTGACTATACAGAACACATGGTTTAAAATATTACACAGAAGCCCATCAGAGCCATTTTTTTTTGGCGAAGTATACCCTCTACATTTTTATAAAAATTCCAAAAAAGTTTGTTTCTTACTATGGACAACTTCCATTTTTGAAAATAAAAAAATGATTTAATCCCCATCTTTGCATAATCTGTACTCCCTAAGGCATGCAAAAGTTGATGCGAGTCCATAAGAAAAATGCGGTTAGCTGAATTCAGCTTATCCGCATTGTTAAAAGCGTGGGTCCACCCTGTATGTGAAGTAGTGATAATGTGAATACCTTCAGTGGCGGAACCAATTTTTTTTATTATGGGGGCCAATATCAAATAGTTAAGTTAAACTTAATTTTAAAAATATGTATGAATGTATGATGTGTGATTAGTGGATTACCCTGTTTTCTGAAAAACAAAAGAAATTAGGAATGAAATTAAAAAAAAAATTGCATTGGCAAGAATCGAACATCAGTCATCAGTCCAAGACATCTGTATTACCAGATTTTCTTTCGTTGTTGTTGCAAATTTGCAATTTCGATTAGTCTCTTACTGGTTTGAATCTCGATACGGATGAGTATCCAAGTAGCAAGTAGAACAAACTTCTTCTACATTTGTTATTTTTGGACATTATTGGCTTATTGAATGGATTGTGGATAGTCGGATAAACTTACATTTTTGCATCAATTTTAAAATTTTGACGAGTGTTCAGGAATAAAATTAAAATGCTTCTCAGTGGGGGTTTTATGTTCTGTCAAAGACAGAATAAAGTTGCCAAGTTGGTGTTCAGACTTCAGAATCATCAAACTGCACTTTATCACTCTTCTTACCACCAGATGCTCCTCTGCCTCTATGATATTACAGTGCTTCAATTGTCGTTACGTTGTGCTACTCTTCCGGTCCTACCTCATATCTTCAGCTTGTTTTGAATATCTGCGTATTATGTCTAATCACGGCTCTCATTTTGAGATGTCATTGCTGCAGATATTTGGATCACTTTAGATGAGTTGTGCAAATATCAATCTTTTCACCATTTCAAGTCTTGTTCTTCGGCTCTTCCCTTAGCTTTAAAAAGTGCGCCAAGGCGCAAGGCGCAGTAAGGTGCGGGAGCTGGCGCATGTCAGCAGACCTACATAAGGCTCGCACCTGTGCTCGTTTTTCTGGGCTCTAGACGCAAGCCTTCTGTGAATAACTGATGTGTAATATATATATTTTTTTTTTGAAAAAACAACACGTGAGTTTGCAACAGCCATTCACTTTAATACCTGAGGAGAGAGAAACCCCAAAATCCCTAATTCCATTCAAACATACTATTAATGAAAAGAGGAAAGAGAAATATGTTGTATTTGGGGTGTTTGTTTGTGGGAGTTTAAAGGTGGGAATGGGATTTTTTAATCCCATGTTTGTTTGAGGGGATTGAGAATAAGAGGTGCGAATTAGATTGGGTATACATCCCTTCTATTAAGGATTCAATACTGGGGGGATTGGTATTAGGGGATGAGAATGAAATTGGAGCAAGACACCCTTTTACCCTTAATAAAACTAAAGAAGAGAGTATAATACTAATGGTAACTTTGTAAATTTCCCAATATATTCCCAACACTTACTAAACAAAGCAATTACCATATTTTTACTAATTGCCAACTACCAATCCCCATCCCACCACTTAATCCCCAAACGGGATTCCCACATACTAAACACAACGCCCCCTGAAAGGAATAATTTGAAAACCAGAGGTATGAAATTTCTTCTATCTCCTTCGTCTTCCTTTTCTCTCCTTCTTCTTCTTCTCTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCTCATTTCCATTTTTTCTTTATCTCTTTGGATCTGGAAGTCGGCTCACTAACTCTGCCTGGGGTGAGGACACCTAATGAAGAAGCTGTGGCTGGCAAAAAATGGATGCCTAGTCCCACCTTCTCTTCATTCCACTATTTTTTTATTCTCCTTTTTTTTAAATTTTTTATTGTGACTTTGTCAGCACACTCATTAACTAGAGGAGAGTGCAGAATCGTGAAGGGCTCTGTTTTTTATTCAAAACACTTTTAATTTTAATCGTGAAGCCTTCCCCCTCTTATTTTTTATTCAAAACACTTTTAGTTTTACTCTCACTACATTTTACCCGTGCTGTGAGACAACAAGCATTAATTACCTTCTGTGCAGAAAAATAAGTACCACAAATAAAGAAAATAGAAGTTCTATAAAAAAGTGAACCTGCTCCTGTTCCTTGCGCCTGGATTCCAGGGACCCTTTGCACCTTTGTGCGCCTTGCACCTTTTGAAACGAAGGCTCTTTCAAAACTTTTGTCTTTGTATTCCATTCCAAAACAAGGAGAGGGTGCCCAGAGTGGTACATGATACTACGGCAGAGTGAGTGAGTGAGTGTGTCTTAGGTGTAGCAACATTGATAATGTTGGACACCAGATTAGTTGAGTGTGTATGAGTAGCATACATGTCAAGTATAGGTACACATAGCATGTGCGTGGATTTGTGGATATATTTTGCATTTTCATGCACAGATTTTAACGTAGGCCTTTTTCTTTATTGTGTCAGAACTTCTGAGTGTCCCACTGGTTCTCAGTGTTCCCGTGGGAGATGAATTATGTATTAGAGGTTTACTATCAATTTCTAATGCGTAAATCAAGAGCAAGAATCATAAAAAAAAATCTCAGAGATTTTAAGTGGAAATCCCCAAGAAGACTTGGAAAAGTAGTTTCTGACTTTCTCCTCTTCATCAGTCCTCTTAAGCAAGTAGGCAAAGACGTGGATGGAGTTTGGGAAGGTTGATGTATGTTTTATTTGTGGTACCAATCTGGTGTAGATGTTGTGCAAGTTGTTTGATGAGAGAAGGATACGTCAGGATGACTCGATGACTCATGAAACTAAACCTGTAATACACTTACCATTTTCTGCAGTTTAAACATTTATATAGATCAGCTGTCCTTCAATTATCAGGTTTCGGTGGCTGTGGATGAAGTTGTTGGGATCAGGGGCTTATAAACTGTGCAATCAACAGTGTAATAATGCGGAATAATAGACAGGAAATGACAAATAAGAATCACAAAGAATACAAGAAGAATTAACGTGGAAAACCTCCTCTTTGGCAAATTTTTTTTTTTTAAAAGAAACCCACCAATTTGAACTACCACTATACTTTATTTTACTTTTGACAACAGCTAACTAAAAAGAACAGTTAAATGAAATTAGAAAAAGAAAGTAAACCTTGAGAAGCGCCTGTTGTGCTAGAGCATGTGCTTGATGAACTCGTTGACGCTCCACCTTGTGATCTGCACCATGAAAAAGCATTTCCTAAGCGTCTGATATCCTTTACTGTCCATAGCATGGACATTACAATCGAATCTTCCCCCAAAAGCTTATGAACCAGCTGATGATGATCAGTGAGAATAGCAATTCTTTGCAAACCAGCTTGCAGTGCTCAACGCATGCCAAAAAGGCAAGCTAATGTTTCATCCTGTAGCGCACTAGTTGTAGTTCCTGATGAAGCTCCACCCGAAATTCTTCCATCTATTCTCCGTTGATCTTCCCAAGCATTTCGCTTATTTTTTCCACTAGTATTGTTGCTATCTGATCGTCAGTGCCAGTATCGTTAGTGATAGCTCTGTAGAATCTAGGTGGGTTCACTGGGTCACTCTCCGAAGGATGGAGAAATTGCAGAGAGTTGCGGTCATCCTTCCTGAAAATTTCATGTTGATTAAGGCCTTTCTTAGTCAATGCGAATACCGAAGCAATGGTAGTGTTCCTTGACAACCAAAGTGCCCAAATGTGCCGATGAAGTAGACACTTCTAGGACTATTTTTCCCATTATGGCGTTGAAAGAGCCAGAAATAAAAAAGAAACCAATCTTAGAACTTATAGTTTTTGGCTAACCCCCAAAATTTATGTCTGATGGATTTATTACATTAGCCTTTTCTGATTTCTATATTTGACATTCTGGCATTGTTTGGTTTCGTTCTTGAGTTGCAGAAGTTATTTTCTTAATGAACTCTTGGTTGACAATATTATTGAAAAGAATATTGTGAGCAGTTCAGAGATCCAAAGGGTTATCTAAGTATGGAGTTTTTGCTTACAACCCCTCCCCCCCTTTATGGGATTTGTCTGATTGAAGACCACCCAAAAGTATCCACTTTATAGGATTGAACATCCAATTTTAGGAACAATGGTAGGAGTCTTTTAGAATTGCTCCATCTTTGGCACTTCTAAGCCTTTCCCTTGTTTAAAATTATATGAAAGAAGTCAAGAACTCAAAGATGATATTTCCATTGTCCTTATTTAATGTGTTGGTAAATGTCTAACTTGGCAATTTATAGATTCTAGGACTTGGGAGACACCTATTTAAATACGCATTCTGCCTCAGGAATTATCAAGATCTAGAACATTTCAAGCCGTGAGTGTTGTATGAAGATTGTATATTACCTGTTCTCTTTAAGAAAATGGCAAATGAACTGCAGAAAAGTTGAAGCAGAAGTATGAAACATCTTACTACTTTTGATATGAAAATGTGTCACTATTAACTCTTAAATTCCTACTAATATGCAGGTTTGCTAGGGGAGAGCATCTTGTAGACGTGACAGAGATTTTCAGAGCACTTAGTGTTGAGAAGAAACACCGGTTAATCAAGCTGGGCCTTTACTTATTGTTTTTCTTCTTGGTCATTTTCAGGTAATTGATTTATATATATGTATACGTGTGTGTGCTCCCATATGCCTGCGTTCTGCCTAATATCTACTCTCTCTGTCCCTTTTGTTTGCCACATTTTCCTTTTTGGGATGTCCCTAAAGAATTGCCCCATACTAAAATGACCTTGGGGGACCACAACTTTTTGGTCCCACCCCTTTGGTCTCTTATCAACTCCACCGAACCAAAATTTAAAAAGTAACTCAACCCCAATGGGGCAAACTAAAGGGCACGGAGGGAGTATTTTACAGCATGTTTAGATCAATTCTGAATGTTTTCTCTTGATATTTGGTCGTAGATTTCCGGCAGGCTCCATTTCCAGTTTGTCAATCTTCTCATCCAAGCATGGAGATTTAGATATCCGTTCCTCTTTTCTAGAGTTTTAGATATTTTCTGTTTAACGTGTAACCAATTTAGAGCGTTGTAAATTTGAACCTGAAAGAAAATCTTGGAATTTGCATCAGTTATATATTCTTTGTCCCGTCTCTAGGATCTTGCTCCACCCCCCTCTGTATTTTGTTAGGAACAAAGTTGCAATATTTTCATTCAACTTAAATGGATTAGGACAAACAAGAAGTTTTTTTTTTTAATGATTGGCTTCTGTATGGTAAATTGTAATGATGTTAATGTTTTCCTTGCCGTGCATCTTTTTATCATGAGCGGAAGTGTGAAAACAATAAAGTGCCAAGGAATCTACATGGTTCAAGATTTTTTGTGAATTTTGGATTTGTTGCATTGTTTACTTGATGCATATCTTTATGATGTTTTACGTGACCCAACCATTATCCTATCAATGTGCTTTGATCTACCTATATTTTACTAAGAAAACCCTCTTTTTAATAAGGAAGGTTACATTTTCTAGCAAAACAGCATTTAAATACTTGGTTTCCCTTTATTTTTTACTAAGAAAACCCTCTTTTTAATAAGGAAGGTTACATTTTCTAGCAAAACAGCATTTAAATACTTGGTTTCCCTTTATTTTTTGACCTTTGTTAAAAACAATTTCTCAGATGTTGGCAGGGGGTGGGCTTTATGTACTGTGTGTTTATTATGTTCATCTTGTTTTCTACCAATGATGAACTATAATTATGCAGGCTTGTGATAGCTATTTATAATTCATTAGCTGATGAAGAAGAAGCATTGCATGGATTTTGGGTGTTCTAGATCCCCAAGGTTTAAGCTCTATAATTGGTTTTCCCTGTGAGTATGTCTTTGGATTCTTTTTAACATGAATGTTCAGATACTTTCATTATAGACATAGATGTAAAGAAAAGAGTAACTGAAATTGCATTTTCTTGAACAGTTTTGACCTTTGGCTGTGCAAGTATCATTTTTGGGGCTCCATCAATATCTGAGTCAGTGAAGGCTGTGACTAACAGAGAAGCGGCGTGTCATAATCATGGCCACTGAAATGGTAAAAATGATGCCTTTTCATGTCATGTTAAAAAGATGACTACACTATTTATGGAATGGGAATCTGGCATCTAAGTTGCTTATAGTATTATCTAAGAAGCCCTTTGTAGTTTGGGTTGAGCGAGAAAGGTTGTTATTTGGTTGTTCCAGTAATGGTGTTTGTTGATGCGACATGTTTTGCTGCTTCTTGTTGATTTGCTAGTTAAAACCTGTAATAGCCTCAAGTTGTGAGGTAGTATGAATGATGTCGAAACCTAACTAGAGCATAAAGTTTTGGGGCCTCCGAAAGTAGGAAGATTTTCATGGAGTTTGTACTGTTGTAGGATGTGGACTAAAAAGCTTTTTAGGGGCTGACAGTAGAATTTAAGGTTCACAGAGAAGAGAGGCATGCTATGTAGAAATGGACGTGACATTCTTGTGCAATTCCCATGTGATGCTGTGTCCAGTTTCTCATAATTTCATGATTTTTTAAAATTTGATTATTGATCTTTTGATTCTTATTTCCCCATCCATATAACCATTAATTAGATAATGATAACAAAAAAA

mRNA sequence

CTCGCCAATAATAGAAATTGACCGGGCGGAGCTGCAACTGCGGTTGAACTTACAACCGAACTGTAACGGAAAAACATTCTCTCTTCTGCTGCAATTTCCACCTCCTTTTCTCCGCATACTTTCCCAATTTTCTCTTCTGCAACTTTTCCCCCTCCTCACTATCATCACTTCAAGCCCCAATTAAGTTGTTCAGTATCAATCTTCACTGAAACCATGCATTGGGACTTAATCTTATGGCTAATTTCCCTAATCTCCAACATCGTTCTCCTCGTTCTCCTCATCTACCAGCTGATATGTTTGTCGGATTTGGAGGCGGATTATATGAATCCATACGAAACGGCAGCGAATATCAATTCTTTGATTTTACCAGAGTTTGGATTGCAGGCAGCTTTCTGTGCTCTTTTTCTTGTTACAGGCCATTTCTTCATGTTTCTCGTCACTCTTCCTGTCGCCATTTATCATGCAAGATTGTTTGCTAGGGGAGAGCATCTTGTAGACGTGACAGAGATTTTCAGAGCACTTAGTGTTGAGAAGAAACACCGGTTAATCAAGCTGGGCCTTTACTTATTGTTTTTCTTCTTGGTCATTTTCAGGCTTGTGATAGCTATTTATAATTCATTAGCTGATGAAGAAGAAGCATTGCATGGATTTTGGGTGTTCTAGATCCCCAAGGTTTAAGCTCTATAATTGGTTTTCCCTTTTTGACCTTTGGCTGTGCAAGTATCATTTTTGGGGCTCCATCAATATCTGAGTCAGTGAAGGCTGTGACTAACAGAGAAGCGGCGTGTCATAATCATGGCCACTGAAATGGTAAAAATGATGCCTTTTCATGTCATGTTAAAAAGATGACTACACTATTTATGGAATGGGAATCTGGCATCTAAGTTGCTTATAGTATTATCTAAGAAGCCCTTTGTAGTTTGGGTTGAGCGAGAAAGGTTGTTATTTGGTTGTTCCAGTAATGGTGTTTGTTGATGCGACATGTTTTGCTGCTTCTTGTTGATTTGCTAGTTAAAACCTGTAATAGCCTCAAGTTGTGAGGTAGTATGAATGATGTCGAAACCTAACTAGAGCATAAAGTTTTGGGGCCTCCGAAAGTAGGAAGATTTTCATGGAGTTTGTACTGTTGTAGGATGTGGACTAAAAAGCTTTTTAGGGGCTGACAGTAGAATTTAAGGTTCACAGAGAAGAGAGGCATGCTATGTAGAAATGGACGTGACATTCTTGTGCAATTCCCATGTGATGCTGTGTCCAGTTTCTCATAATTTCATGATTTTTTAAAATTTGATTATTGATCTTTTGATTCTTATTTCCCCATCCATATAACCATTAATTAGATAATGATAACAAAAAAA

Coding sequence (CDS)

ATGCATTGGGACTTAATCTTATGGCTAATTTCCCTAATCTCCAACATCGTTCTCCTCGTTCTCCTCATCTACCAGCTGATATGTTTGTCGGATTTGGAGGCGGATTATATGAATCCATACGAAACGGCAGCGAATATCAATTCTTTGATTTTACCAGAGTTTGGATTGCAGGCAGCTTTCTGTGCTCTTTTTCTTGTTACAGGCCATTTCTTCATGTTTCTCGTCACTCTTCCTGTCGCCATTTATCATGCAAGATTGTTTGCTAGGGGAGAGCATCTTGTAGACGTGACAGAGATTTTCAGAGCACTTAGTGTTGAGAAGAAACACCGGTTAATCAAGCTGGGCCTTTACTTATTGTTTTTCTTCTTGGTCATTTTCAGGCTTGTGATAGCTATTTATAATTCATTAGCTGATGAAGAAGAAGCATTGCATGGATTTTGGGTGTTCTAG

Protein sequence

MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFRLVIAIYNSLADEEEALHGFWVF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16293.1	Spo16293.1	mRNA

Homology

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BLAST of Spo16293.1 vs. NCBI nr
Match: gi|902138834|gb|KNA04527.1| (hypothetical protein SOVF_198890 [Spinacia oleracea])

HSP 1 Score: 283.5 bits (724), Expect = 2.100e-73
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF
Sbjct: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF
Sbjct: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGFWVF 150
           FFLVIFRLVIAIYNSLADEEEALHGFWVF
Sbjct: 121 FFLVIFRLVIAIYNSLADEEEALHGFWVF 149

[Close]

BLAST of Spo16293.1 vs. NCBI nr
Match: gi|731324001|ref|XP_010672732.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.300e-62
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           MHWDLILWLI+LISNI LLVLLIYQ+ICLSDLEADYMNPYE++ NINS+ILPEFGLQAAF
Sbjct: 1   MHWDLILWLIALISNIGLLVLLIYQMICLSDLEADYMNPYESSTNINSMILPEFGLQAAF 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           CALFL+TGH+ MFLVTLPVAIYHARLF RGEHLVDVTEIFRALS+EKK+R +KL LYLLF
Sbjct: 61  CALFLLTGHWLMFLVTLPVAIYHARLFTRGEHLVDVTEIFRALSLEKKYRFVKLVLYLLF 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGFWVF 150
           FFLVIFRLVIAIYNSL DE+EA+ G W+F
Sbjct: 121 FFLVIFRLVIAIYNSLVDEDEAVRGLWLF 149

[Close]

BLAST of Spo16293.1 vs. NCBI nr
Match: gi|731323999|ref|XP_010672731.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.2 bits (544), Expect = 1.600e-52
Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           MHWDLILWLI+LISNI LLVLLIYQ+ICLSDLEADYMNPYE++ NINS+ILPEFGLQAAF
Sbjct: 1   MHWDLILWLIALISNIGLLVLLIYQMICLSDLEADYMNPYESSTNINSMILPEFGLQAAF 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           CALFL+TGH+ MFLVTLPVAIYHARLF RGEHLVDVTEIFRALS+EKK+R +KL LYLLF
Sbjct: 61  CALFLLTGHWLMFLVTLPVAIYHARLFTRGEHLVDVTEIFRALSLEKKYRFVKLVLYLLF 120

Query: 121 FFLVIFRLVIAIYNSLA 138
           FFLVIFR      +SL+
Sbjct: 121 FFLVIFRFPTGSVSSLS 137

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BLAST of Spo16293.1 vs. NCBI nr
Match: gi|870864264|gb|KMT15384.1| (hypothetical protein BVRB_3g060880 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 176.4 bits (446), Expect = 3.700e-41
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 1


		  
Query: 26  LICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVTGHFFMFLVTLPVAIYHAR 85
           +ICLSDLEADYMNPYE++ NINS+ILPEFGLQAAFCALFL+TGH+ MFLVTLPVAIYHAR
Sbjct: 1   MICLSDLEADYMNPYESSTNINSMILPEFGLQAAFCALFLLTGHWLMFLVTLPVAIYHAR 60

Query: 86  LFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFRLVIAIYNSLA 138
           LF RGEHLVDVTEIFRALS+EKK+R +KL LYLLFFFLVIFR      +SL+
Sbjct: 61  LFTRGEHLVDVTEIFRALSLEKKYRFVKLVLYLLFFFLVIFRFPTGSVSSLS 112

[Close]

BLAST of Spo16293.1 vs. NCBI nr
Match: gi|225441700|ref|XP_002282874.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Vitis vinifera])

HSP 1 Score: 168.7 bits (426), Expect = 7.700e-39
Identity = 82/146 (56.16%), Postives = 112/146 (76.71%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M W+LILW+I    NI LL    YQ++CLSDLEADYMNPYE+++ INS+++P+F LQ   
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           C LFL+T H+F+FL+++P+  Y+A LF + +HL+DVTE+FR LS EKK+R+ KL  YL  
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGF 147
           F +VI RLVI I+NS+ DEE+A+H F
Sbjct: 121 FIIVIIRLVICIFNSVIDEEDAVHIF 146

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BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QB72_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_198890 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.500e-73
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF
Sbjct: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF
Sbjct: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGFWVF 150
           FFLVIFRLVIAIYNSLADEEEALHGFWVF
Sbjct: 121 FFLVIFRLVIAIYNSLADEEEALHGFWVF 149

[Close]

BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTK3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060880 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.600e-41
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 1


		  
Query: 26  LICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVTGHFFMFLVTLPVAIYHAR 85
           +ICLSDLEADYMNPYE++ NINS+ILPEFGLQAAFCALFL+TGH+ MFLVTLPVAIYHAR
Sbjct: 1   MICLSDLEADYMNPYESSTNINSMILPEFGLQAAFCALFLLTGHWLMFLVTLPVAIYHAR 60

Query: 86  LFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFRLVIAIYNSLA 138
           LF RGEHLVDVTEIFRALS+EKK+R +KL LYLLFFFLVIFR      +SL+
Sbjct: 61  LFTRGEHLVDVTEIFRALSLEKKYRFVKLVLYLLFFFLVIFRFPTGSVSSLS 112

[Close]

BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Match: A0A103YMW6_CYNCS (Cornichon OS=Cynara cardunculus var. scolymus GN=Ccrd_009518 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.800e-38
Identity = 83/150 (55.33%), Postives = 114/150 (76.00%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M W++ILW+I  I N  L+   +YQ++CL+DLEADYMNPY++++ IN++I+PE  L    
Sbjct: 1   MAWEVILWVIFFIMNTALIASNLYQIVCLTDLEADYMNPYDSSSRINAVIIPEMVLHGVC 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           CALFLVTGH+FMFL+TLP+AIY   L+++  HL+DVTE+FR +  EKK+R+ KL  YL+ 
Sbjct: 61  CALFLVTGHWFMFLLTLPIAIYSTMLYSKKRHLIDVTEVFRFIDAEKKYRIAKLAFYLIL 120

Query: 121 FFLVIFRLVIAIYNSLA-DEEEALHGFWVF 150
           F LVI R+VIAI N+L  DEEE + GF +F
Sbjct: 121 FVLVIIRMVIAIVNNLIDDEEERVPGFGIF 150

[Close]

BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Match: A0A0D6R3K4_ARACU (Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.600e-36
Identity = 78/141 (55.32%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M W+++LWLIS +  I LL +++YQLICLSDLE DY+NPY++++ IN L++PEF +QA  
Sbjct: 1   MAWEVLLWLISFVIVIALLGIVVYQLICLSDLEFDYINPYDSSSRINWLVIPEFVIQAGL 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           C LFL+T H+FMFL+T P+  YH +L+ + +HLVDVTEIF  L+ EKK+R+IKLG YL+F
Sbjct: 61  CLLFLLTWHWFMFLITAPLVYYHVQLYLKRKHLVDVTEIFNVLNGEKKYRMIKLGYYLIF 120

Query: 121 FFLVIFRLVIAIYNSLADEEE 142
           FF+VI+RLV +   +L D ++
Sbjct: 121 FFIVIYRLVASAVIALIDGDD 141

[Close]

BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HLM6_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.200e-35
Identity = 82/143 (57.34%), Postives = 109/143 (76.22%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M W+ ILWLI L  NI L+ LLIYQ++CL+DLEADYMNPYE+++ INS++L E+ L  AF
Sbjct: 1   MSWEPILWLIFLAINISLISLLIYQIVCLTDLEADYMNPYESSSRINSVVLKEYILHGAF 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           C LFLVTGH+F+FL+TL  A Y+ R F   +HL+DVTE+FR +  EKK R++KLG YL+ 
Sbjct: 61  CILFLVTGHWFIFLLTLLPAYYNVRKFLSWQHLIDVTEVFRFIESEKKIRILKLGFYLVL 120

Query: 121 FFLVIFRLVIAIYNSLADEEEAL 144
           F LV+  LV++  N L DE+EA+
Sbjct: 121 FVLVLVSLVLSFINVLVDEDEAI 143

[Close]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Match: CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.000e-35
Identity = 71/146 (48.63%), Postives = 103/146 (70.55%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M WDL LW++S   ++ L+  + YQ+ICL+DLEADY+NP+ET+  IN L++PEF LQ + 
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           C LFL+T H+  FLV +PV +YHA L+    +L+DVTE+FR +S EKK R  KLG Y+  
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGF 147
           F +V+FRL ++   S  ++++ LH F
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Match: CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.100e-28
Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 1


		  
Query: 4   DLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCAL 63
           D+  WLIS    I L+ +++YQL+CL+DLE DY+NPY++A+ INS++LPEF +Q   C  
Sbjct: 3   DIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVF 62

Query: 64  FLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFL 123
           +L+TGH+FM L+ LP   Y+  L+++ +HLVDVTEIF  L+ EKK RL KL   +L  FL
Sbjct: 63  YLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFL 122

Query: 124 VIFRLVIAIYNSLADEEE 142
            IF +   IY++L D E+
Sbjct: 123 TIFWM---IYSALDDYED 137

[Close]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Match: CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.500e-26
Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 8   WLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVT 67
           W+IS +  I LL L++YQLI L+DLE DY+NPY++A+ IN ++LPE  LQ   C  +LVT
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFR 127
           GH+FM L+ +P   Y+  L++R +HL+DVTEIF  L  EKK RL KL   +L  FL IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LVIAIYNSLADEEE 142
           L   IY++L D E+
Sbjct: 127 L---IYSTLDDYED 137

[Close]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Match: CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.200e-25
Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = 1


		  
Query: 23  IYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVTGHFFMFLVTLPVAIY 82
           I+ L+CL+DLE DY+NPY++A+ INS++LPEF +Q   C  +L+TGH+FM L+ LP   Y
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 83  HARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFRLVIAIYNSLADEEE 142
           +  L+++ +HLVDVTEIF  L+ EKK RL KL   +L  FL IF +   IY++L D E+
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWM---IYSALDDYED 129

[Close]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Match: CNIH5_ARATH (Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 5.900e-23
Identity = 57/135 (42.22%), Postives = 91/135 (67.41%), Query Frame = 1


		  
Query: 4   DLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCAL 63
           DL+ W+IS +    L++++IYQL CL+DLE D +NPY+ ++ IN ++LPEFGLQ   C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFL 123
           +++TGH+FM +++LP   Y+ RL+ + EHL DVTE++     E+K R+ K+G   L  F+
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRLVIAIYNSLAD 139
             + L   I+++L D
Sbjct: 123 TTYWL---IHSALGD 134

[Close]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Match: AT3G12180.1 (Cornichon family protein)

HSP 1 Score: 149.1 bits (375), Expect = 2.200e-36
Identity = 71/146 (48.63%), Postives = 103/146 (70.55%), Query Frame = 1


		  
Query: 1   MHWDLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAF 60
           M WDL LW++S   ++ L+  + YQ+ICL+DLEADY+NP+ET+  IN L++PEF LQ + 
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CALFLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLF 120
           C LFL+T H+  FLV +PV +YHA L+    +L+DVTE+FR +S EKK R  KLG Y+  
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FFLVIFRLVIAIYNSLADEEEALHGF 147
           F +V+FRL ++   S  ++++ LH F
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Match: AT1G12390.1 (Cornichon family protein)

HSP 1 Score: 125.2 bits (313), Expect = 3.400e-29
Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 1


		  
Query: 4   DLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCAL 63
           D+  WLIS    I L+ +++YQL+CL+DLE DY+NPY++A+ INS++LPEF +Q   C  
Sbjct: 3   DIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVF 62

Query: 64  FLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFL 123
           +L+TGH+FM L+ LP   Y+  L+++ +HLVDVTEIF  L+ EKK RL KL   +L  FL
Sbjct: 63  YLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFL 122

Query: 124 VIFRLVIAIYNSLADEEE 142
            IF +   IY++L D E+
Sbjct: 123 TIFWM---IYSALDDYED 137

[Close]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Match: AT1G62880.1 (Cornichon family protein)

HSP 1 Score: 120.6 bits (301), Expect = 8.500e-28
Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 8   WLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVT 67
           W+IS +  I LL L++YQLI L+DLE DY+NPY++A+ IN ++LPE  LQ   C  +LVT
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFR 127
           GH+FM L+ +P   Y+  L++R +HL+DVTEIF  L  EKK RL KL   +L  FL IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LVIAIYNSLADEEE 142
           L   IY++L D E+
Sbjct: 127 L---IYSTLDDYED 137

[Close]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Match: AT1G12340.1 (Cornichon family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.200e-26
Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = 1


		  
Query: 23  IYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCALFLVTGHFFMFLVTLPVAIY 82
           I+ L+CL+DLE DY+NPY++A+ INS++LPEF +Q   C  +L+TGH+FM L+ LP   Y
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 83  HARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFLVIFRLVIAIYNSLADEEE 142
           +  L+++ +HLVDVTEIF  L+ EKK RL KL   +L  FL IF +   IY++L D E+
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWM---IYSALDDYED 129

[Close]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Match: AT4G12090.1 (Cornichon family protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.300e-24
Identity = 57/135 (42.22%), Postives = 91/135 (67.41%), Query Frame = 1


		  
Query: 4   DLILWLISLISNIVLLVLLIYQLICLSDLEADYMNPYETAANINSLILPEFGLQAAFCAL 63
           DL+ W+IS +    L++++IYQL CL+DLE D +NPY+ ++ IN ++LPEFGLQ   C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLVTGHFFMFLVTLPVAIYHARLFARGEHLVDVTEIFRALSVEKKHRLIKLGLYLLFFFL 123
           +++TGH+FM +++LP   Y+ RL+ + EHL DVTE++     E+K R+ K+G   L  F+
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRLVIAIYNSLAD 139
             + L   I+++L D
Sbjct: 123 TTYWL---IHSALGD 134

The following BLAST results are available for this feature:

BLAST of Spo16293.1 vs. NCBI nr
BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
BLAST of Spo16293.1 vs. TAIR (Arabidopsis)

BLAST of Spo16293.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902138834\|gb\|KNA04527.1\|	2.1e-73	100.	hypothetical protein SOVF_1988...	[more]
gi\|731324001\|ref\|XP_010672732.1\|	1.3e-62	85.2	PREDICTED: protein cornichon h...	[more]
gi\|731323999\|ref\|XP_010672731.1\|	1.6e-52	82.4	PREDICTED: protein cornichon h...	[more]
gi\|870864264\|gb\|KMT15384.1\|	3.7e-41	80.3	hypothetical protein BVRB_3g06...	[more]
gi\|225441700\|ref\|XP_002282874.1\|	7.7e-39	56.1	PREDICTED: protein cornichon h...	[more]

BLAST of Spo16293.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QB72_SPIOL	1.5e-73	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CTK3_BETVU	2.6e-41	80.3	Uncharacterized protein OS=Bet...	[more]
A0A103YMW6_CYNCS	7.8e-38	55.3	Cornichon OS=Cynara cardunculu...	[more]
A0A0D6R3K4_ARACU	5.6e-36	55.3	Uncharacterized protein OS=Ara...	[more]
A0A0V0HLM6_SOLCH	1.2e-35	57.3	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo16293.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CNIH1_ARATH	4.0e-35	48.6	Protein cornichon homolog 1 OS...	[more]
CNIH4_ARATH	6.1e-28	49.2	Protein cornichon homolog 4 OS...	[more]
CNIH3_ARATH	1.5e-26	50.7	Protein cornichon homolog 3 OS...	[more]
CNIH2_ARATH	2.2e-25	50.4	Probable protein cornichon hom...	[more]
CNIH5_ARATH	5.9e-23	42.2	Protein cornichon homolog 5 OS...	[more]

BLAST of Spo16293.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G12180.1	2.2e-36	48.6	Cornichon family protein	[more]
AT1G12390.1	3.4e-29	49.2	Cornichon family protein	[more]
AT1G62880.1	8.5e-28	50.7	Cornichon family protein	[more]
AT1G12340.1	1.2e-26	50.4	Cornichon family protein	[more]
AT4G12090.1	3.3e-24	42.2	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..126 score: 8.5
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 5..126 score: 8.2
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 3..140 score: 8.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0030091	protein repair
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0010286	heat acclimation
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006621	protein retention in ER lumen
biological_process	GO:0042908	xenobiotic transport
biological_process	GO:0007165	signal transduction
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009617	response to bacterium
biological_process	GO:0006417	regulation of translation
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0009556	microsporogenesis
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0010076	maintenance of floral meristem identity
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0052543	callose deposition in cell wall
biological_process	GO:0006810	transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0006768	biotin metabolic process
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009651	response to salt stress
biological_process	GO:0032259	methylation
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008152	metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0010014	meristem initiation
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0051176	positive regulation of sulfur metabolic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0009744	response to sucrose
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0030007	cellular potassium ion homeostasis
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009723	response to ethylene
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0043090	amino acid import
biological_process	GO:0009749	response to glucose
biological_process	GO:0009750	response to fructose
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000325	plant-type vacuole
cellular_component	GO:0009349	riboflavin synthase complex
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0044464	cell part
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0000900	translation repressor activity, mRNA regulatory element binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008281	sulfonylurea receptor activity
molecular_function	GO:0008559	xenobiotic transmembrane transporting ATPase activity
molecular_function	GO:0046923	ER retention sequence binding
molecular_function	GO:0016866	intramolecular transferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008430	selenium binding
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0004746	riboflavin synthase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0004077	biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17578	0.77	Barchart \| Table
Spo21660	0.75	Barchart \| Table
Spo09554	0.75	Barchart \| Table
Spo24425	0.74	Barchart \| Table
Spo22811	0.74	Barchart \| Table
Spo21144	0.73	Barchart \| Table
Spo27081	0.73	Barchart \| Table
Spo26697	0.73	Barchart \| Table
Spo22583	0.72	Barchart \| Table
Spo02665	0.72	Barchart \| Table
Spo16996	0.72	Barchart \| Table
Spo08713	0.71	Barchart \| Table
Spo02918	0.71	Barchart \| Table
Spo12370	0.71	Barchart \| Table
Spo06953	0.70	Barchart \| Table
Spo00498	0.70	Barchart \| Table
Spo16240	0.70	Barchart \| Table
Spo00872	0.70	Barchart \| Table
Spo25196	0.70	Barchart \| Table
Spo24324	0.69	Barchart \| Table
Spo02696	0.69	Barchart \| Table
Spo04653	0.69	Barchart \| Table
Spo18578	0.69	Barchart \| Table
Spo05923	0.69	Barchart \| Table
Spo09335	0.69	Barchart \| Table
Spo27364	0.68	Barchart \| Table
Spo05402	0.68	Barchart \| Table
Spo08850	0.68	Barchart \| Table
Spo08935	0.68	Barchart \| Table
Spo09671	0.68	Barchart \| Table
Spo09769	0.68	Barchart \| Table
Spo12976	0.68	Barchart \| Table
Spo13161	0.68	Barchart \| Table
Spo13193	0.68	Barchart \| Table
Spo15461	0.68	Barchart \| Table
Spo20106	0.68	Barchart \| Table
Spo20544	0.68	Barchart \| Table
Spo24675	0.68	Barchart \| Table
Spo25008	0.68	Barchart \| Table
Spo14225	0.67	Barchart \| Table
Spo07609	0.67	Barchart \| Table
Spo20869	0.67	Barchart \| Table
Spo20912	0.67	Barchart \| Table
Spo08407	0.67	Barchart \| Table
Spo10835	0.67	Barchart \| Table
Spo21155	0.67	Barchart \| Table
Spo23745	0.67	Barchart \| Table
Spo11688	0.67	Barchart \| Table
Spo23384	0.67	Barchart \| Table
Spo13691	0.67	Barchart \| Table
Spo26610	0.66	Barchart \| Table
Spo01328	0.66	Barchart \| Table
Spo21046	0.66	Barchart \| Table
Spo03757	0.66	Barchart \| Table
Spo21446	0.66	Barchart \| Table
Spo03195	0.66	Barchart \| Table
Spo02932	0.66	Barchart \| Table
Spo02573	0.66	Barchart \| Table
Spo13180	0.66	Barchart \| Table
Spo13393	0.66	Barchart \| Table
Spo13490	0.66	Barchart \| Table
Spo15222	0.66	Barchart \| Table
Spo15317	0.66	Barchart \| Table
Spo25717	0.66	Barchart \| Table
Spo07915	0.66	Barchart \| Table
Spo16643	0.66	Barchart \| Table
Spo06004	0.66	Barchart \| Table
Spo18958	0.66	Barchart \| Table
Spo19341	0.66	Barchart \| Table
Spo23857	0.66	Barchart \| Table
Spo02106	0.66	Barchart \| Table
Spo01925	0.66	Barchart \| Table
Spo01054	0.66	Barchart \| Table
Spo10092	0.66	Barchart \| Table
Spo11558	0.66	Barchart \| Table
Spo00205	0.66	Barchart \| Table
Spo14342	0.65	Barchart \| Table
Spo25573	0.65	Barchart \| Table
Spo23076	0.65	Barchart \| Table
Spo19288	0.65	Barchart \| Table
Spo23658	0.65	Barchart \| Table
Spo05125	0.65	Barchart \| Table
Spo17828	0.65	Barchart \| Table
Spo01686	0.65	Barchart \| Table
Spo15843	0.65	Barchart \| Table