Spo15966 (gene)

Overview
NameSpo15966
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 3731079 .. 3731378 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCAACACATGTAGATCCCCACAACCCCACAAAATATACTCCCCATCAAAATGCATGCTATGCCACTCCTTCATTTTCCTCCCTCCACGTGTCCCCCTACCCCTTAAATATCTCCCCCCTTCTTTACTTAACGCCGTCATCACCTCCACCTCTCACCCTCCCCCAAAAAACGTCAATTAAACACCGTCAAATTCCCTCACTCATTCCTTGTTTCTTTCACCCCCCCTCTCCAACATCCCTCCTACTCTCACATTCCCTCATTCCTCTCATTCTCTCATTCTCTCTCTTCCTTTGA

mRNA sequence

ATGAGTGCAACACATGTAGATCCCCACAACCCCACAAAATATACTCCCCATCAAAATGCATGCTATGCCACTCCTTCATTTTCCTCCCTCCACGTGTCCCCCTACCCCTTAAATATCTCCCCCCTTCTTTACTTAACGCCGTCATCACCTCCACCTCTCACCCTCCCCCAAAAAACGTCAATTAAACACCGTCAAATTCCCTCACTCATTCCTTGTTTCTTTCACCCCCCCTCTCCAACATCCCTCCTACTCTCACATTCCCTCATTCCTCTCATTCTCTCATTCTCTCTCTTCCTTTGA

Coding sequence (CDS)

ATGAGTGCAACACATGTAGATCCCCACAACCCCACAAAATATACTCCCCATCAAAATGCATGCTATGCCACTCCTTCATTTTCCTCCCTCCACGTGTCCCCCTACCCCTTAAATATCTCCCCCCTTCTTTACTTAACGCCGTCATCACCTCCACCTCTCACCCTCCCCCAAAAAACGTCAATTAAACACCGTCAAATTCCCTCACTCATTCCTTGTTTCTTTCACCCCCCCTCTCCAACATCCCTCCTACTCTCACATTCCCTCATTCCTCTCATTCTCTCATTCTCTCTCTTCCTTTGA

Protein sequence

MSATHVDPHNPTKYTPHQNACYATPSFSSLHVSPYPLNISPLLYLTPSSPPPLTLPQKTSIKHRQIPSLIPCFFHPPSPTSLLLSHSLIPLILSFSLFL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15966.1Spo15966.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15966.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15966.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15966.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15966.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003960 NADPH:quinone reductase activity
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo133610.65Barchart | Table