Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGAAATTTGCGTAGGTGACGACAAGTATCGTAGGCATTAGATCTCGTGAAAGAGCAGCTTAGCGTAGGTCCCGGATCCGTTAAATGTTGGAGCGCGCAGACACTCCACTCCACATGGAATCAACGCGGTTACTCACTCATCTCTCTCTCTCCGTCTCTTTCCCTTTTCTTTTTTAATTTTTGTTTCTTGAGATTGGGATTTTGGAATTTTATATTTTTGTTTGTAGGATTCTTCTTCTTTCTCTAATTCTTTATCTACGTCTTCTTCTTCACCCCACACCAGTTACCCCACTACATTTCTCTCCACCAATTCATCAAAACATTTCATGTAATTTCAACTCCTGGGTTTGCTTTTAAGAGATTTGCCAACTCTTTTCTATCCAAACATGTAAATTGAAATCTGGGTTTTATTTTTATCTGTATAATTGTATTCAATCATGTAAATCAAATTCTGGGTTTCATCAATCTGTCAAGTTGCACGTGAGGATTGAGAATATCATTTTGATTTCTTTGATTATTCTACCATTTTCCAATGGAAGTTCTTCCTGATGTTGAGGCCACTCAATATTTGAGGTGACTATGTTTTCTTCTTCTAATTTCTTTTCTTTTTTTTATTGTTCTGGGTTTTAAAAGAACAATTATGGGTTTCATTTGATCAGCTTTTATGGGAATGTAGATCATTCAATATTTAAATCATTCATAAGTGATTGATGCATGTTGGATTATTGTTCATTTTTTTGTATTTTTTTTATAATACAACATGATTCATTGTGAATCATTCATCTTTCATTTCTCAGCATTGCTGTTTGCAGTGAGTCTGATTAGATCAGAAAGTGTAAAACTTTTGTTAAATTGGCTGTGTTACCTTAAATCTTTAATGTTGTTGTACCTAATATTTTGTATTGTAATCACATATGGTACTCGTATTGCATGTGATTAGATACATTAACTACCATATTAACTTTGCATAATACTATCACATTATAATGTTGGGGCTATAAGTGGTAATGGTGGTCCCCCCGAATCGAGGAGTCGGAGTGCATCTGTCACTCTGTCAGGCTGTCACTGAGTCAGTCACCAATCAATACCAGAATAAGTAAAAGAAAGTAAAGTGAGGTGGATGATCATGTAGATTGTGTCATATGACAGAAAAGGCTGTTACCCAGTTAGTCCAAAACAATTTGTCAGAAAGTTGCAGAAGACTTAGATTTTTGGTATACTTCAAGAATTGCTGAATTATGAACACAAGTGAGAGATGAAATAATGACATTGTGGCAAATGCGGAAACTGCATAATGTCTGTTAACTACTTCGGCTATTATTTGTTATAAATAACTAAAAGCTGTGTGTTTGTTGCATTTGTATTGATCTAGTGAATGAATTTGGATTAAACTACTTACTTTAGTACATTTCGTTGATTATAAATGAGAGGGAGTGTGTAACCCATATGTATTAATTTGAGTATGTAGAGGGTATTGAGTTCTTAAGTGATTTTGAGGGGTTTCAACTTAGTTGAAATAGAAGTTCTCAGTTTCTCACTATATTGTGCATTTGTGCTACTAATATACTACAACAATATGCAGAGAAGACTATCTTGTTGTGGCCAGGGTTGTGGAGTAATTTAGGATTCAACCGTGAACTTATTATCTTATTTTCTTAGTGTTTACAATTTTCAAACTGGTATCTCTTGCCTACAGTTTATTTGCTGCCTTGTCTTATGGAGCAACTTCAATGGCTATGGTCTTCCTCAACAAGGCAATCCTCATGGAATACTCGTACTCAATGACTCTCCTGACAGTCCAGGTACGTGGTGGGATTTACACTTGAAACATGTGATTTCTAAACTTAGCATTGTGTTAATATCTGCCTTGTTTTACCTTGTTCAATTCATCAATTGAGTTGTGCTTGTTTTATGTTCAGCAAATTGCAACTGCTCTGCTTATTCACACCGGTCGTGTGATGGGATACACAAAGGCCAAGGCTTTGAGCATGGATACTGCTAAGAAGCTTCTTTGGGTGTCACTTTTCTACAATGCCAATGTAGCCTTTGCTTTAGCAAGCTTGAAAGGAGTTAACATTCCCATGTATATTGCGATCAAACGACTTACGCCGCTTGCTGTACTGGTGGCTGGATTCTTTTCAGGGAAGAAAAGACCTTCAAGACAGGTTTTTTGCACTTATCATTTTAGTTCCACGGCAAAGATTTATCAAAATCTTTTGTGCAAATGTTTGTTACTCCCTAGATAAGGATGCTGCTTTTTTCAGTATTCTAGTTTGCTATCAGATGGTGAGAGTAAGTGAACAACGGATGCTAGTTCATCTTTAGCTATCCATACGGATGCATATGTTTCTGCATTAGGATGTGATTTTAGTTACCTCTATATGGTTGGATATGCAGGACTTTTTCAGGAAGTTAATTGGTGCTTGACTTGGAAACAGTGTGTTTCTGTACATAAGGAGCAAGGCTAAATGCATCTGGCTGCTGAATTTTCAGTTGTATGCCAAAATGCACATGGTGGTGATTGTATACCGGGAGCATTGAGTTTAGCTTTGGCCTTACTTTATAACTCTCGTGTGTCCTAGATTACTTGGTTTTTTTTATCATTGGGTTAAAAATATACTAAGTTTTAGATTCTTTTGATAGGAATGTACTGTACGTCCTACATAATCATGCAGGTTAACAGCTGTTTGGCTATTGTTTTTGTTCAGGTCAGTCTTTCAGTGATTCTCACAGCTGTTGGGGTACTTATTGCAGCACTTGGAGATTTTTCCTTTGATCTTTTTGGTTACAGCTTGGCATTAATTTCTGTCTTTTTTCAGGTAATCTTTGCCTTGACGGCTAATGCTATGTATAGATGCTTTTTCTCTTCAATTTTTCATTGTTACAACAGACAAAACTTGGATTTCATCATCTTTGTTTTGTGGGGGTAATGGAATGTTCGTTATGGATGCAGACAATGTACTTAGTCTTAGTTGAGAAATCTGGTGCAGAAGATGGGCTTTCATCGGTGGAGATTATGTTCTATAACAGCTTTTTATCAATTCCAGTTCTTCTGTTTCTCATTGTAGCAACAAAAGAGTTTCCTGATTCATTATCTTTGTTGTTTGCCAAGGTAAGATATCAATCTCGTCCTTGTGTTTGAAATCATGTTGTTTTACAAGATCCAGATCAATATCATGACACCTTCATGTATTGGGAACTGAATGCTCTTTTCAAATTCAAGAACCAGATAAGTATCAAAACGAGTACAATTTAAGTAAAACATGTGATTTTTATTTCATCTGATTGAATATAGTAATGTGATTTTGAACTGTGGAACAGAGTTCTTCCCTGTCGTTTTTGGTGATCCTTACTACTTCTCTAATCATGGGAATTGCTCTCAACTTCACCATGTTCCTGTGCACAATAGTCAACTCTGCTCTGACAACAACTATTGTTGGAGTTCTGAAAGGTGTTGGATCAACGGTATGGATGGATATCTTCCTTTTGTAAATAATAATTAGCTTGTTTATCTGGAAGGTTAGATAAATGTAACTAACTTGTTTTTTTCTGTAACTCAGACCCTTGGATTTGTGTTGCTGGGAGGAGTAGAAGTACATGCTCTGAATGTGAGTGGATTGGTTATCAACACTGCAGGAGGCATCTGGTATTCTTACGCTAAATACCACGAGAAGAGAAAGAAACTACCTAAGACGACTCTTGATGTGGAGGCACATCGAAAATAATAGCATTTTTAGTTTTTACTTTGTTACTTTCATTTTGATACACATCATTTTTTACATCCGATGTATACTTCATATGAACCTCAGAAATAGAGATATATCTGTCACACATTGTTCAGAAAGAAATACAAGATGTTGAAAGATCAAGGGATTTTACTTGTTCATAGATTTTCTGGAAACAAGTGAGTTGGAAATCTGAAGACGGATTGCACTTACATTATTTAAA AGCGAAATTTGCGTAGGTGACGACAAGTATCGTAGGCATTAGATCTCGTGAAAGAGCAGCTTAGCGTAGGTCCCGGATCCGTTAAATGTTGGAGCGCGCAGACACTCCACTCCACATGGAATCAACGCGGTTACTCACTCATCTCTCTCTCTCCGTCTCTTTCCCTTTTCTTTTTTAATTTTTGTTTCTTGAGATTGGGATTTTGGAATTTTATATTTTTGTTTGTAGGATTCTTCTTCTTTCTCTAATTCTTTATCTACGTCTTCTTCTTCACCCCACACCAGTTACCCCACTACATTTCTCTCCACCAATTCATCAAAACATTTCATGTAATTTCAACTCCTGGGTTTGCTTTTAAGAGATTTGCCAACTCTTTTCTATCCAAACATGTAAATTGAAATCTGGGTTTTATTTTTATCTGTATAATTGTATTCAATCATGTAAATCAAATTCTGGGTTTCATCAATCTGTCAAGTTGCACGTGAGGATTGAGAATATCATTTTGATTTCTTTGATTATTCTACCATTTTCCAATGGAAGTTCTTCCTGATGTTGAGGCCACTCAATATTTGAGTTTATTTGCTGCCTTGTCTTATGGAGCAACTTCAATGGCTATGGTCTTCCTCAACAAGGCAATCCTCATGGAATACTCGTACTCAATGACTCTCCTGACAGTCCAGCAAATTGCAACTGCTCTGCTTATTCACACCGGTCGTGTGATGGGATACACAAAGGCCAAGGCTTTGAGCATGGATACTGCTAAGAAGCTTCTTTGGGTGTCACTTTTCTACAATGCCAATGTAGCCTTTGCTTTAGCAAGCTTGAAAGGAGTTAACATTCCCATGTATATTGCGATCAAACGACTTACGCCGCTTGCTGTACTGGTGGCTGGATTCTTTTCAGGGAAGAAAAGACCTTCAAGACAGGTCAGTCTTTCAGTGATTCTCACAGCTGTTGGGGTACTTATTGCAGCACTTGGAGATTTTTCCTTTGATCTTTTTGGTTACAGCTTGGCATTAATTTCTGTCTTTTTTCAGACAATGTACTTAGTCTTAGTTGAGAAATCTGGTGCAGAAGATGGGCTTTCATCGGTGGAGATTATGTTCTATAACAGCTTTTTATCAATTCCAGTTCTTCTGTTTCTCATTGTAGCAACAAAAGAGTTTCCTGATTCATTATCTTTGTTGTTTGCCAAGAGTTCTTCCCTGTCGTTTTTGGTGATCCTTACTACTTCTCTAATCATGGGAATTGCTCTCAACTTCACCATGTTCCTGTGCACAATAGTCAACTCTGCTCTGACAACAACTATTGTTGGAGTTCTGAAAGGTGTTGGATCAACGACCCTTGGATTTGTGTTGCTGGGAGGAGTAGAAGTACATGCTCTGAATGTGAGTGGATTGGTTATCAACACTGCAGGAGGCATCTGGTATTCTTACGCTAAATACCACGAGAAGAGAAAGAAACTACCTAAGACGACTCTTGATGTGGAGGCACATCGAAAATAATAGCATTTTTAGTTTTTACTTTGTTACTTTCATTTTGATACACATCATTTTTTACATCCGATGTATACTTCATATGAACCTCAGAAATAGAGATATATCTGTCACACATTGTTCAGAAAGAAATACAAGATGTTGAAAGATCAAGGGATTTTACTTGTTCATAGATTTTCTGGAAACAAGTGAGTTGGAAATCTGAAGACGGATTGCACTTACATTATTTAAA ATGGAAGTTCTTCCTGATGTTGAGGCCACTCAATATTTGAGTTTATTTGCTGCCTTGTCTTATGGAGCAACTTCAATGGCTATGGTCTTCCTCAACAAGGCAATCCTCATGGAATACTCGTACTCAATGACTCTCCTGACAGTCCAGCAAATTGCAACTGCTCTGCTTATTCACACCGGTCGTGTGATGGGATACACAAAGGCCAAGGCTTTGAGCATGGATACTGCTAAGAAGCTTCTTTGGGTGTCACTTTTCTACAATGCCAATGTAGCCTTTGCTTTAGCAAGCTTGAAAGGAGTTAACATTCCCATGTATATTGCGATCAAACGACTTACGCCGCTTGCTGTACTGGTGGCTGGATTCTTTTCAGGGAAGAAAAGACCTTCAAGACAGGTCAGTCTTTCAGTGATTCTCACAGCTGTTGGGGTACTTATTGCAGCACTTGGAGATTTTTCCTTTGATCTTTTTGGTTACAGCTTGGCATTAATTTCTGTCTTTTTTCAGACAATGTACTTAGTCTTAGTTGAGAAATCTGGTGCAGAAGATGGGCTTTCATCGGTGGAGATTATGTTCTATAACAGCTTTTTATCAATTCCAGTTCTTCTGTTTCTCATTGTAGCAACAAAAGAGTTTCCTGATTCATTATCTTTGTTGTTTGCCAAGAGTTCTTCCCTGTCGTTTTTGGTGATCCTTACTACTTCTCTAATCATGGGAATTGCTCTCAACTTCACCATGTTCCTGTGCACAATAGTCAACTCTGCTCTGACAACAACTATTGTTGGAGTTCTGAAAGGTGTTGGATCAACGACCCTTGGATTTGTGTTGCTGGGAGGAGTAGAAGTACATGCTCTGAATGTGAGTGGATTGGTTATCAACACTGCAGGAGGCATCTGGTATTCTTACGCTAAATACCACGAGAAGAGAAAGAAACTACCTAAGACGACTCTTGATGTGGAGGCACATCGAAAATAA MEVLPDVEATQYLSLFAALSYGATSMAMVFLNKAILMEYSYSMTLLTVQQIATALLIHTGRVMGYTKAKALSMDTAKKLLWVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKKRPSRQVSLSVILTAVGVLIAALGDFSFDLFGYSLALISVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSIPVLLFLIVATKEFPDSLSLLFAKSSSLSFLVILTTSLIMGIALNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVLLGGVEVHALNVSGLVINTAGGIWYSYAKYHEKRKKLPKTTLDVEAHRK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15952.1 vs. NCBI nr
Match: gi|902203236|gb|KNA14500.1| (hypothetical protein SOVF_107040 [Spinacia oleracea]) HSP 1 Score: 585.9 bits (1509), Expect = 4.400e-164 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
BLAST of Spo15952.1 vs. NCBI nr
Match: gi|731362644|ref|XP_010692995.1| (PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 538.5 bits (1386), Expect = 8.000e-150 Identity = 291/323 (90.09%), Postives = 309/323 (95.67%), Query Frame = 1
BLAST of Spo15952.1 vs. NCBI nr
Match: gi|590571557|ref|XP_007011628.1| (UDP-N-acetylglucosamine (UAA) transporter family isoform 1 [Theobroma cacao]) HSP 1 Score: 484.2 bits (1245), Expect = 1.800e-133 Identity = 258/323 (79.88%), Postives = 297/323 (91.95%), Query Frame = 1
BLAST of Spo15952.1 vs. NCBI nr
Match: gi|697142906|ref|XP_009625558.1| (PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Nicotiana tomentosiformis]) HSP 1 Score: 483.4 bits (1243), Expect = 3.100e-133 Identity = 258/317 (81.39%), Postives = 292/317 (92.11%), Query Frame = 1
BLAST of Spo15952.1 vs. NCBI nr
Match: gi|1009156376|ref|XP_015896216.1| (PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Ziziphus jujuba]) HSP 1 Score: 479.9 bits (1234), Expect = 3.400e-132 Identity = 262/323 (81.11%), Postives = 291/323 (90.09%), Query Frame = 1
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4S0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107040 PE=4 SV=1) HSP 1 Score: 585.9 bits (1509), Expect = 3.100e-164 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEN7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g045240 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 5.600e-150 Identity = 291/323 (90.09%), Postives = 309/323 (95.67%), Query Frame = 1
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Match: A0A061GIL6_THECC (UDP-N-acetylglucosamine (UAA) transporter family isoform 1 OS=Theobroma cacao GN=TCM_036842 PE=4 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 1.300e-133 Identity = 258/323 (79.88%), Postives = 297/323 (91.95%), Query Frame = 1
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Match: M1CVB9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029372 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 5.300e-132 Identity = 258/317 (81.39%), Postives = 289/317 (91.17%), Query Frame = 1
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Match: B9RNP8_RICCO (UDP-sugar transporter, putative OS=Ricinus communis GN=RCOM_0919510 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 5.300e-132 Identity = 262/323 (81.11%), Postives = 288/323 (89.16%), Query Frame = 1
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Match: Y8631_DICDI (Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 3.700e-38 Identity = 99/271 (36.53%), Postives = 155/271 (57.20%), Query Frame = 1
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Match: S35D3_HUMAN (Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.800e-25 Identity = 91/304 (29.93%), Postives = 156/304 (51.32%), Query Frame = 1
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Match: S35D3_MOUSE (Solute carrier family 35 member D3 OS=Mus musculus GN=Slc35d3 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.600e-25 Identity = 92/314 (29.30%), Postives = 160/314 (50.96%), Query Frame = 1
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Match: SQV7_CAEEL (UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.100e-24 Identity = 92/324 (28.40%), Postives = 161/324 (49.69%), Query Frame = 1
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Match: S35D1_HUMAN (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.900e-22 Identity = 91/301 (30.23%), Postives = 144/301 (47.84%), Query Frame = 1
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Match: AT4G31600.1 (UDP-N-acetylglucosamine (UAA) transporter family) HSP 1 Score: 451.8 bits (1161), Expect = 3.500e-127 Identity = 246/323 (76.16%), Postives = 280/323 (86.69%), Query Frame = 1
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Match: AT4G32272.2 (Nucleotide/sugar transporter family protein) HSP 1 Score: 111.3 bits (277), Expect = 1.100e-24 Identity = 91/317 (28.71%), Postives = 163/317 (51.42%), Query Frame = 1
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Match: AT5G42420.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 61.2 bits (147), Expect = 1.300e-9 Identity = 75/306 (24.51%), Postives = 141/306 (46.08%), Query Frame = 1
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Match: AT3G17430.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 54.3 bits (129), Expect = 1.600e-7 Identity = 72/314 (22.93%), Postives = 136/314 (43.31%), Query Frame = 1
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Match: AT4G39390.1 (nucleotide sugar transporter-KT 1) HSP 1 Score: 50.1 bits (118), Expect = 3.100e-6 Identity = 75/308 (24.35%), Postives = 135/308 (43.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15952.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15952.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15952.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15952.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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