Homology
BLAST of Spo15945.1 vs. NCBI nr
Match:
gi|902230262|gb|KNA21785.1| (hypothetical protein SOVF_039620 [Spinacia oleracea])
HSP 1 Score: 2465.3 bits (6388), Expect = 0.000e+0
Identity = 1212/1213 (99.92%), Postives = 1212/1213 (99.92%), Query Frame = 1
Query: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF
Sbjct: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
Query: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS
Sbjct: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
Query: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV
Sbjct: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
Query: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK
Sbjct: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
Query: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV
Sbjct: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
Query: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK
Sbjct: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
Query: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD
Sbjct: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
Query: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN
Sbjct: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
Query: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH
Sbjct: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
Query: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST
Sbjct: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
Query: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR
Sbjct: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
Query: 661 ILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
ILRPLLVVENLKRIKLLKGDEYSFE LLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG
Sbjct: 661 ILRPLLVVENLKRIKLLKGDEYSFETLLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
Query: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS
Sbjct: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
Query: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV
Sbjct: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
Query: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP
Sbjct: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
Query: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP
Sbjct: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
Query: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Sbjct: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
Query: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR
Sbjct: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
Query: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL
Sbjct: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
Query: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF
Sbjct: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
Query: 1201 SMGISLRFDTQLC 1214
SMGISLRFDTQLC
Sbjct: 1201 SMGISLRFDTQLC 1213
BLAST of Spo15945.1 vs. NCBI nr
Match:
gi|731317048|ref|XP_010667540.1| (PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 2214.5 bits (5737), Expect = 0.000e+0
Identity = 1070/1213 (88.21%), Postives = 1153/1213 (95.05%), Query Frame = 1
Query: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
MG+ GK GLG+SS N KE FD ID+EM WDD DMESD+D D+MD+DLHDLGEAS+M+F
Sbjct: 1 MGIEGKGGLGSSS---NGKEAFDDIDMEMSWDDEDMESDDDADIMDMDLHDLGEASLMNF 60
Query: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
CKKA+AAFFKQHGLISHQINSYNNFV NGIQ+VFDAI EI+VNPGYDPSKKG+G WRYAS
Sbjct: 61 CKKAAAAFFKQHGLISHQINSYNNFVRNGIQKVFDAIGEITVNPGYDPSKKGDGEWRYAS 120
Query: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
V+FGKVELE PMFWTGEKFHA+GG D++KLLPRHARLQNMTYSARLKVET LQIY+QEKV
Sbjct: 121 VRFGKVELERPMFWTGEKFHADGGDDFIKLLPRHARLQNMTYSARLKVETHLQIYSQEKV 180
Query: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
+SDKFKTGKSEY+D+ +LKD+TT+VIVGR+PVMV SDICWMS+V+KGDCEFD GGYFIVK
Sbjct: 181 RSDKFKTGKSEYVDKKILKDDTTDVIVGRIPVMVKSDICWMSEVQKGDCEFDTGGYFIVK 240
Query: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
GAEKTFIAQEQ+CL+RLW+SN+P+WKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV
Sbjct: 241 GAEKTFIAQEQMCLRRLWVSNDPFWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
Query: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
YF ++EVPIWILFFALGV SDKEVVELIDC+TDDGRISNILFASIHDADEKC+ FR+G K
Sbjct: 301 YFLLVEVPIWILFFALGVESDKEVVELIDCNTDDGRISNILFASIHDADEKCEDFRKG-K 360
Query: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
A+EY+D++IRE KFPP E T E++ LFPSLSG+KQKARFLAYMVKCLLQAFSG+RKCD
Sbjct: 361 ALEYLDKVIRECKFPPAEPTKEFIEANLFPSLSGSKQKARFLAYMVKCLLQAFSGKRKCD 420
Query: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
NRDDFRNKR+ECASELLERELRVHMRHAEKRMVKAMQRDLYGERDL +IE YLDASIVTN
Sbjct: 421 NRDDFRNKRIECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLHAIEQYLDASIVTN 480
Query: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
GLTRSFSTGAWAHP+KR++RVSGVVANLRRTNPLQ+ICDMRKTRQQVSYTGKVGDARYPH
Sbjct: 481 GLTRSFSTGAWAHPYKRSDRVSGVVANLRRTNPLQSICDMRKTRQQVSYTGKVGDARYPH 540
Query: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
PSHWGKICFLSTPDGENCGLVKNIAATG VSS+I ++ER+ LL+TL C M++LV+DS T
Sbjct: 541 PSHWGKICFLSTPDGENCGLVKNIAATGFVSSNIVEDERLLLLDTLAGCKMEKLVNDSCT 600
Query: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
SLSGK+KVLVDGEWVGVC++SL VEELRRKRR++ + +VEIKRD QNAEVRIFCDAGR
Sbjct: 601 SLSGKNKVLVDGEWVGVCAESLSFVEELRRKRRKRHISREVEIKRDAQNAEVRIFCDAGR 660
Query: 661 ILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
ILRPLLVVENLK+ KLLKGDE+SFE L+DKGII+LIG EEEEDCRTAWGI+ L+EDKGK
Sbjct: 661 ILRPLLVVENLKKTKLLKGDEFSFETLMDKGIIELIGVEEEEDCRTAWGIKYLFEDKGKD 720
Query: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
VKY+HCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS
Sbjct: 721 AVKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
Query: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
HQMYYPQRPLFRSVISDCLGK + LGR+QILP EFFNGQNGIVAVNVHLGYNQEDSLV
Sbjct: 781 HQMYYPQRPLFRSVISDCLGKPGYPLGRSQILPKAEFFNGQNGIVAVNVHLGYNQEDSLV 840
Query: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
MNRASLERGMFRT+H RSYKAEVDNKESSEKRRKF+DTVSFGKMQSKLGRVD+LDDDGFP
Sbjct: 841 MNRASLERGMFRTEHTRSYKAEVDNKESSEKRRKFDDTVSFGKMQSKLGRVDSLDDDGFP 900
Query: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
YIGANLQSGDIIIGRCAESG DHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP
Sbjct: 901 YIGANLQSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
Query: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
CLGDKFSSMHGQKGVLG+LESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Sbjct: 961 CLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
Query: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR
Sbjct: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
Query: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL
Sbjct: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
Query: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
SDSSQMHVCRKCKN+ANVIQR +PGGKKIRGPYCRFCESVDE+VKV+VPYGAKLLCQELF
Sbjct: 1141 SDSSQMHVCRKCKNIANVIQRAIPGGKKIRGPYCRFCESVDEIVKVNVPYGAKLLCQELF 1200
Query: 1201 SMGISLRFDTQLC 1214
SMGISLRF+TQLC
Sbjct: 1201 SMGISLRFETQLC 1209
BLAST of Spo15945.1 vs. NCBI nr
Match:
gi|697103774|ref|XP_009605686.1| (PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana tomentosiformis])
HSP 1 Score: 1837.4 bits (4758), Expect = 0.000e+0
Identity = 878/1185 (74.09%), Postives = 1026/1185 (86.58%), Query Frame = 1
Query: 31 WDDVDMESDEDGDLMDLD-LHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNG 90
WD+ + + D+D D +D+ + +LGE + +FCKKAS FF+++GLISHQINSYN+F+ G
Sbjct: 41 WDEDEDDDDDDDDNLDVGPIKELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYG 100
Query: 91 IQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKDYMK 150
IQRVFD++ EI V PGYDPSK+G+G W++ASVKFGKV LE P FW GEKF +GGK+Y+
Sbjct: 101 IQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKEYLD 160
Query: 151 LLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGR 210
L PRHARLQNMTYSAR+ VET +Q+YT++ V+SDKFKTG +++D+ ++ +V++GR
Sbjct: 161 LWPRHARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGR 220
Query: 211 VPVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAY 270
+PVMVNS++CWM+ V+K DCEFDHGGYFIVKGAEKTFIAQEQICLKRLW+SN P W VAY
Sbjct: 221 IPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAY 280
Query: 271 RSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELID 330
R KR RV++KL E K E+I+G EK ++VYFS+ E+PIWILFFALGVSSD+EVV+LID
Sbjct: 281 RPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLID 340
Query: 331 CSTDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLF 390
+D I NIL ASIHDAD+KC+ FR+G KA+ Y+D++I+ +FPP E+ E + +YLF
Sbjct: 341 VDIEDTNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLF 400
Query: 391 PSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAE 450
P+LSG KQKARFL YMVK LL AF GRRK DNRDDFRNKRLE A ELLERELR H++HAE
Sbjct: 401 PNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAE 460
Query: 451 KRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLR 510
+RM+KAMQRDLYG+R +Q IEHYLDASI+TNGL+R+FSTG W HP+KR ERVSGVVA +R
Sbjct: 461 RRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIR 520
Query: 511 RTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGL 570
RTNPLQ DMRKTRQQV+YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKN+A+ GL
Sbjct: 521 RTNPLQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGL 580
Query: 571 VSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELR 630
VS++I K LLETL RCGM +LV DS+ SL GK KVL++G+WVGVC DS V +LR
Sbjct: 581 VSTTILKP----LLETLYRCGMQKLVDDSAISLHGKQKVLLNGDWVGVCEDSALFVSKLR 640
Query: 631 RKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFEALLD 690
RKRRR +P QVE+KRD Q EVRIF DAGRILRPLLVV NLK+IK LKG +Y F++LLD
Sbjct: 641 RKRRRNEVPHQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLD 700
Query: 691 KGIIDLIGTEEEEDCRTAWGIR-LLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFANHD 750
GII+LIG EEEEDCRTAWG+ LL DK P KY+HCELDMSFLLG+SCGIIPFANHD
Sbjct: 701 NGIIELIGPEEEEDCRTAWGVEYLLKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHD 760
Query: 751 HARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGR 810
HARRVLYQSEKHS QAIG+S+ NPNIRVDT +HQ+YYPQRPLFR+++SD LGK +++ +
Sbjct: 761 HARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQ 820
Query: 811 NQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKES 870
+LP E++NGQ IVAVNVHLGYNQEDSLVMNRASLERGMFR++H+RSYKAEVDNKE+
Sbjct: 821 KGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEA 880
Query: 871 SEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSVKLK 930
K+ K ED+V+FGK QSK+GRVD+LDDDGFP+IGANLQSGDIIIG+ AESG DHSVKLK
Sbjct: 881 IGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKHAESGADHSVKLK 940
Query: 931 HTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFT 990
HTERGMVQKV+LSAND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT
Sbjct: 941 HTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT 1000
Query: 991 KQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVEAITEQLHRA 1050
QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA GG +YATPFSTLSV+AI EQLH
Sbjct: 1001 AQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGR 1060
Query: 1051 GFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADR 1110
GFS+WGNERVYNGRTGEM++ LIFMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1061 GFSKWGNERVYNGRTGEMVQNLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1120
Query: 1111 KRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVIQRTVPGGKK 1170
KRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMH+C KCKN+ANVIQR+V GG K
Sbjct: 1121 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-K 1180
Query: 1171 IRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
+RGPYCRFCESV+++VKV+VPYGAKLLCQELFSMGISL+FDT++C
Sbjct: 1181 VRGPYCRFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEVC 1220
BLAST of Spo15945.1 vs. NCBI nr
Match:
gi|225430474|ref|XP_002283296.1| (PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Vitis vinifera])
HSP 1 Score: 1836.6 bits (4756), Expect = 0.000e+0
Identity = 876/1192 (73.49%), Postives = 1033/1192 (86.66%), Query Frame = 1
Query: 28 EMLWDDVDMESDEDGDLM-DLDLHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFV 87
E L + V ME D+D LM +++ DL + + +FCKK + +FF ++GLI HQINS+N+F+
Sbjct: 18 EKLSNGVQMEIDDD--LMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFI 77
Query: 88 TNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKD 147
NGIQRVFD+ EI V PGYDPSK+GEG WRYASV+FGKV LE P W GE GK+
Sbjct: 78 KNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKE 137
Query: 148 YMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGK-SEYIDRTVLKDETTEV 207
+ LPRHARLQNMTYS+R+K + Q+YTQ+ V+SDK+KTGK ++Y+++ V+ ++ ++
Sbjct: 138 SLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 197
Query: 208 IVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYW 267
++GR+PVMV S++CWM+ VE+GDCE+DHGGYF++KGAEKTFIAQEQICLKRLW+S+ P W
Sbjct: 198 LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 257
Query: 268 KVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVV 327
VAYR +KR+RV+VKL E PK EN +GGEKV++VYFS E+PIWILFFALG SSDKEVV
Sbjct: 258 MVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVV 317
Query: 328 ELIDCSTDDGRISNILFASIHDADEKCDG----FRRGAKAMEYIDQMIRESKFPPDETTA 387
+LID + DD ISNIL ASIH+AD + + FRR A+ ++D++++ KFPP E+
Sbjct: 318 DLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQ 377
Query: 388 EYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLEREL 447
E + KYLFP+ SG KQKARFL YMVKCLLQA++GRRKCDNRDDFRNKRLE A ELLEREL
Sbjct: 378 ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 437
Query: 448 RVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERV 507
RVH+RHAE+RMVKAMQR+LYG+RDL+ IE+YLDASI+TNGL+R+FSTG W+HPFKR ER+
Sbjct: 438 RVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERI 497
Query: 508 SGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLV 567
SGVVA LRRTNPLQ DMRKTRQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLV
Sbjct: 498 SGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLV 557
Query: 568 KNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDS 627
KN+A TGLVS+ + L++ L CGM++LV D+ST LSGK+KV +DG+WVGVC D
Sbjct: 558 KNLAITGLVSTEVLDP----LVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDP 617
Query: 628 LKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDE 687
+ V ELR KRR K LP QVEIKRD Q EVRIF DAGRILRPLLVVENLK++K KGD+
Sbjct: 618 ISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDD 677
Query: 688 YSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGI 747
++F++LLDKGI++LIG EEEEDC TAWGI+ L + PVKY+HCELDMSFLLG+SCGI
Sbjct: 678 FTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDDPPVKYTHCELDMSFLLGLSCGI 737
Query: 748 IPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGK 807
IP+ANHDHARRVLYQSEKHS QAIG+S+TNPNIRVDTLSHQ+YYPQRPLFR++ISDCLGK
Sbjct: 738 IPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGK 797
Query: 808 AEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKA 867
+S G I+P E+FNGQ IVAVNVHLGYNQEDSLVMNRASLERGMFR++HIRSYK+
Sbjct: 798 PGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKS 857
Query: 868 EVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGT 927
EVDN ES +K+RK ED+V FGKMQSK+GRVD+LDDDGFP+IGANLQ+GDI+IGRCAESG
Sbjct: 858 EVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGV 917
Query: 928 DHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLES 987
DHS+KLKHTERGMVQKVV+SANDDGKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLG+LES
Sbjct: 918 DHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLES 977
Query: 988 QENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVEAI 1047
QENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG LR+ATPFSTLSV+AI
Sbjct: 978 QENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAI 1037
Query: 1048 TEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLT 1107
+QLHRAGFSRWG+ERVYNGRTGEM+R+LIFMGPTFYQRLIHM+EDKVKFRNTGPVHPLT
Sbjct: 1038 ADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLT 1097
Query: 1108 RQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVIQR 1167
RQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDS+ MH+CR+CKN++NVIQR
Sbjct: 1098 RQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQR 1157
Query: 1168 TVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
+V GG+K+RGPYCR+CES +E+VKV+VPYGAKLLCQELFSMGISL+F+TQLC
Sbjct: 1158 SVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198
BLAST of Spo15945.1 vs. NCBI nr
Match:
gi|698480989|ref|XP_009787511.1| (PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1 [Nicotiana sylvestris])
HSP 1 Score: 1828.1 bits (4734), Expect = 0.000e+0
Identity = 881/1194 (73.79%), Postives = 1025/1194 (85.85%), Query Frame = 1
Query: 22 FDGIDL-EMLWDDVDMESDEDGDLMDLDLHDLGEASVMSFCKKASAAFFKQHGLISHQIN 81
FD DL E+ DD D + D+D +L + +LGE + +FCKKAS FF+++GLISHQIN
Sbjct: 38 FDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFLKNFCKKASTGFFEKYGLISHQIN 97
Query: 82 SYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFH 141
SYN+F+ GIQRVFD + EI V PGYDPSK+G+G W++ASVKFGKV LE P FW GEKF
Sbjct: 98 SYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFS 157
Query: 142 AEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKD 201
+GGK+Y+ L PRHARLQNMTYSAR+ VET +Q+YT++ V+SDKFKTG +++D+ +
Sbjct: 158 VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEME 217
Query: 202 ETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWIS 261
+ +V++GR+PVMVNS++CWM+ V+K DCEFDHGGYFIVKGAEKTFIAQEQICLKRLW+S
Sbjct: 218 DKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVS 277
Query: 262 NEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSS 321
N P W VAYR KR RV++KL E K E+I+G EK ++VYFS+ E+PIWILFFALGVSS
Sbjct: 278 NSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSS 337
Query: 322 DKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETT 381
D+EVV LID +D I NIL ASIHDAD+KC+ FR+G KA+ Y+D++I+ +FPP E+
Sbjct: 338 DREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESV 397
Query: 382 AEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERE 441
E + +YLFP+LSG KQKARFL YMVK LL AF GRRK DNRDDFRNKRLE A ELLERE
Sbjct: 398 EECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERE 457
Query: 442 LRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAER 501
LR H++HAE+RM+KAMQRDLYG+R +Q IEHYLDASI+TNGL+R+FSTG W HP+KR ER
Sbjct: 458 LRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMER 517
Query: 502 VSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGL 561
VSGVVA +RRTNPLQ DMRKTRQQV+YTGKVGDARYPHPSHWGK+CFLSTPDGENCGL
Sbjct: 518 VSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGL 577
Query: 562 VKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSD 621
VKN+A+ GLVS++I K LLETL RCGM +LV DS+TSL GK KVL++G+WVG+C D
Sbjct: 578 VKNLASMGLVSTTILKP----LLETLYRCGMQKLVDDSATSLHGKQKVLLNGDWVGICED 637
Query: 622 SLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGD 681
S V +LRRKRRR +P QVE+KRD Q EVR+F DAGRILRPLLVV NLK+IK LKG
Sbjct: 638 SAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDAGRILRPLLVVSNLKKIKALKGG 697
Query: 682 EYSFEALLDKGIIDLIGTEEEEDCRTAWGIR-LLYEDKGKGPVKYSHCELDMSFLLGVSC 741
+ F++LLD GII+LIG EEEEDCRTAWG+ LL DK P KY+HCELDMSFLLG+SC
Sbjct: 698 DCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADKENPPAKYTHCELDMSFLLGLSC 757
Query: 742 GIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCL 801
GIIPFANHDHARRVLYQSEKHS QAIG+S+ NPNIRVDT +HQ+YYPQRPLFR+++SD L
Sbjct: 758 GIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRPLFRTMLSDSL 817
Query: 802 GKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSY 861
GK +++ + +LP E++NGQ IVAVNVHLGYNQEDSLVMN ASLERGMFR++H+RSY
Sbjct: 818 GKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNCASLERGMFRSEHVRSY 877
Query: 862 KAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAES 921
KAEVDNKE+ K+ K ED+V+FGK QSK+GRVD+LDDDGFP+IGANLQSGDIIIG+ AES
Sbjct: 878 KAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKYAES 937
Query: 922 GTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYL 981
G DHSVKLKHTERGMVQKV+LSAND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+L
Sbjct: 938 GADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 997
Query: 982 ESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVE 1041
ESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA GG +YATPFSTLSV+
Sbjct: 998 ESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVD 1057
Query: 1042 AITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHP 1101
AI EQLH GFS+WGNERVYNGRTGEM + LIFMGPTFYQRLIHM+EDKVKFRNTGPVHP
Sbjct: 1058 AIIEQLHGRGFSKWGNERVYNGRTGEMGQNLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1117
Query: 1102 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVI 1161
LTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHVC KCKN+ANVI
Sbjct: 1118 LTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCGKCKNMANVI 1177
Query: 1162 QRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
QR+V GG K+RGPYCRFCESV+++VKV+VPYGAKLLCQELFSMGISL+FDT++C
Sbjct: 1178 QRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1226
BLAST of Spo15945.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9RQH5_SPIOL (DNA-directed RNA polymerase subunit beta OS=Spinacia oleracea GN=SOVF_039620 PE=3 SV=1)
HSP 1 Score: 2465.3 bits (6388), Expect = 0.000e+0
Identity = 1212/1213 (99.92%), Postives = 1212/1213 (99.92%), Query Frame = 1
Query: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF
Sbjct: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
Query: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS
Sbjct: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
Query: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV
Sbjct: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
Query: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK
Sbjct: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
Query: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV
Sbjct: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
Query: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK
Sbjct: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
Query: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD
Sbjct: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
Query: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN
Sbjct: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
Query: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH
Sbjct: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
Query: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST
Sbjct: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
Query: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR
Sbjct: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
Query: 661 ILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
ILRPLLVVENLKRIKLLKGDEYSFE LLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG
Sbjct: 661 ILRPLLVVENLKRIKLLKGDEYSFETLLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
Query: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS
Sbjct: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
Query: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV
Sbjct: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
Query: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP
Sbjct: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
Query: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP
Sbjct: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
Query: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Sbjct: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
Query: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR
Sbjct: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
Query: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL
Sbjct: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
Query: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF
Sbjct: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
Query: 1201 SMGISLRFDTQLC 1214
SMGISLRFDTQLC
Sbjct: 1201 SMGISLRFDTQLC 1213
BLAST of Spo15945.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8CWZ3_BETVU (DNA-directed RNA polymerase subunit beta OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g031510 PE=3 SV=1)
HSP 1 Score: 2214.5 bits (5737), Expect = 0.000e+0
Identity = 1070/1213 (88.21%), Postives = 1153/1213 (95.05%), Query Frame = 1
Query: 1 MGLGGKDGLGTSSKSRNDKEPFDGIDLEMLWDDVDMESDEDGDLMDLDLHDLGEASVMSF 60
MG+ GK GLG+SS N KE FD ID+EM WDD DMESD+D D+MD+DLHDLGEAS+M+F
Sbjct: 1 MGIEGKGGLGSSS---NGKEAFDDIDMEMSWDDEDMESDDDADIMDMDLHDLGEASLMNF 60
Query: 61 CKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYAS 120
CKKA+AAFFKQHGLISHQINSYNNFV NGIQ+VFDAI EI+VNPGYDPSKKG+G WRYAS
Sbjct: 61 CKKAAAAFFKQHGLISHQINSYNNFVRNGIQKVFDAIGEITVNPGYDPSKKGDGEWRYAS 120
Query: 121 VKFGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKV 180
V+FGKVELE PMFWTGEKFHA+GG D++KLLPRHARLQNMTYSARLKVET LQIY+QEKV
Sbjct: 121 VRFGKVELERPMFWTGEKFHADGGDDFIKLLPRHARLQNMTYSARLKVETHLQIYSQEKV 180
Query: 181 KSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVK 240
+SDKFKTGKSEY+D+ +LKD+TT+VIVGR+PVMV SDICWMS+V+KGDCEFD GGYFIVK
Sbjct: 181 RSDKFKTGKSEYVDKKILKDDTTDVIVGRIPVMVKSDICWMSEVQKGDCEFDTGGYFIVK 240
Query: 241 GAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
GAEKTFIAQEQ+CL+RLW+SN+P+WKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV
Sbjct: 241 GAEKTFIAQEQMCLRRLWVSNDPFWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISV 300
Query: 301 YFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAK 360
YF ++EVPIWILFFALGV SDKEVVELIDC+TDDGRISNILFASIHDADEKC+ FR+G K
Sbjct: 301 YFLLVEVPIWILFFALGVESDKEVVELIDCNTDDGRISNILFASIHDADEKCEDFRKG-K 360
Query: 361 AMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCD 420
A+EY+D++IRE KFPP E T E++ LFPSLSG+KQKARFLAYMVKCLLQAFSG+RKCD
Sbjct: 361 ALEYLDKVIRECKFPPAEPTKEFIEANLFPSLSGSKQKARFLAYMVKCLLQAFSGKRKCD 420
Query: 421 NRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN 480
NRDDFRNKR+ECASELLERELRVHMRHAEKRMVKAMQRDLYGERDL +IE YLDASIVTN
Sbjct: 421 NRDDFRNKRIECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLHAIEQYLDASIVTN 480
Query: 481 GLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPH 540
GLTRSFSTGAWAHP+KR++RVSGVVANLRRTNPLQ+ICDMRKTRQQVSYTGKVGDARYPH
Sbjct: 481 GLTRSFSTGAWAHPYKRSDRVSGVVANLRRTNPLQSICDMRKTRQQVSYTGKVGDARYPH 540
Query: 541 PSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSST 600
PSHWGKICFLSTPDGENCGLVKNIAATG VSS+I ++ER+ LL+TL C M++LV+DS T
Sbjct: 541 PSHWGKICFLSTPDGENCGLVKNIAATGFVSSNIVEDERLLLLDTLAGCKMEKLVNDSCT 600
Query: 601 SLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGR 660
SLSGK+KVLVDGEWVGVC++SL VEELRRKRR++ + +VEIKRD QNAEVRIFCDAGR
Sbjct: 601 SLSGKNKVLVDGEWVGVCAESLSFVEELRRKRRKRHISREVEIKRDAQNAEVRIFCDAGR 660
Query: 661 ILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG 720
ILRPLLVVENLK+ KLLKGDE+SFE L+DKGII+LIG EEEEDCRTAWGI+ L+EDKGK
Sbjct: 661 ILRPLLVVENLKKTKLLKGDEFSFETLMDKGIIELIGVEEEEDCRTAWGIKYLFEDKGKD 720
Query: 721 PVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
VKY+HCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS
Sbjct: 721 AVKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLS 780
Query: 781 HQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLV 840
HQMYYPQRPLFRSVISDCLGK + LGR+QILP EFFNGQNGIVAVNVHLGYNQEDSLV
Sbjct: 781 HQMYYPQRPLFRSVISDCLGKPGYPLGRSQILPKAEFFNGQNGIVAVNVHLGYNQEDSLV 840
Query: 841 MNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFP 900
MNRASLERGMFRT+H RSYKAEVDNKESSEKRRKF+DTVSFGKMQSKLGRVD+LDDDGFP
Sbjct: 841 MNRASLERGMFRTEHTRSYKAEVDNKESSEKRRKFDDTVSFGKMQSKLGRVDSLDDDGFP 900
Query: 901 YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
YIGANLQSGDIIIGRCAESG DHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP
Sbjct: 901 YIGANLQSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960
Query: 961 CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
CLGDKFSSMHGQKGVLG+LESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Sbjct: 961 CLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020
Query: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR
Sbjct: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080
Query: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL
Sbjct: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140
Query: 1141 SDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELF 1200
SDSSQMHVCRKCKN+ANVIQR +PGGKKIRGPYCRFCESVDE+VKV+VPYGAKLLCQELF
Sbjct: 1141 SDSSQMHVCRKCKNIANVIQRAIPGGKKIRGPYCRFCESVDEIVKVNVPYGAKLLCQELF 1200
Query: 1201 SMGISLRFDTQLC 1214
SMGISLRF+TQLC
Sbjct: 1201 SMGISLRFETQLC 1209
BLAST of Spo15945.1 vs. UniProtKB/TrEMBL
Match:
F6H335_VITVI (DNA-directed RNA polymerase subunit beta OS=Vitis vinifera GN=VIT_04s0008g06580 PE=3 SV=1)
HSP 1 Score: 1836.6 bits (4756), Expect = 0.000e+0
Identity = 876/1192 (73.49%), Postives = 1033/1192 (86.66%), Query Frame = 1
Query: 28 EMLWDDVDMESDEDGDLM-DLDLHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFV 87
E L + V ME D+D LM +++ DL + + +FCKK + +FF ++GLI HQINS+N+F+
Sbjct: 18 EKLSNGVQMEIDDD--LMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFI 77
Query: 88 TNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKD 147
NGIQRVFD+ EI V PGYDPSK+GEG WRYASV+FGKV LE P W GE GK+
Sbjct: 78 KNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKE 137
Query: 148 YMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGK-SEYIDRTVLKDETTEV 207
+ LPRHARLQNMTYS+R+K + Q+YTQ+ V+SDK+KTGK ++Y+++ V+ ++ ++
Sbjct: 138 SLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 197
Query: 208 IVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYW 267
++GR+PVMV S++CWM+ VE+GDCE+DHGGYF++KGAEKTFIAQEQICLKRLW+S+ P W
Sbjct: 198 LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 257
Query: 268 KVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVV 327
VAYR +KR+RV+VKL E PK EN +GGEKV++VYFS E+PIWILFFALG SSDKEVV
Sbjct: 258 MVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVV 317
Query: 328 ELIDCSTDDGRISNILFASIHDADEKCDG----FRRGAKAMEYIDQMIRESKFPPDETTA 387
+LID + DD ISNIL ASIH+AD + + FRR A+ ++D++++ KFPP E+
Sbjct: 318 DLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQ 377
Query: 388 EYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLEREL 447
E + KYLFP+ SG KQKARFL YMVKCLLQA++GRRKCDNRDDFRNKRLE A ELLEREL
Sbjct: 378 ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 437
Query: 448 RVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERV 507
RVH+RHAE+RMVKAMQR+LYG+RDL+ IE+YLDASI+TNGL+R+FSTG W+HPFKR ER+
Sbjct: 438 RVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERI 497
Query: 508 SGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLV 567
SGVVA LRRTNPLQ DMRKTRQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLV
Sbjct: 498 SGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLV 557
Query: 568 KNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDS 627
KN+A TGLVS+ + L++ L CGM++LV D+ST LSGK+KV +DG+WVGVC D
Sbjct: 558 KNLAITGLVSTEVLDP----LVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDP 617
Query: 628 LKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDE 687
+ V ELR KRR K LP QVEIKRD Q EVRIF DAGRILRPLLVVENLK++K KGD+
Sbjct: 618 ISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDD 677
Query: 688 YSFEALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGI 747
++F++LLDKGI++LIG EEEEDC TAWGI+ L + PVKY+HCELDMSFLLG+SCGI
Sbjct: 678 FTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDDPPVKYTHCELDMSFLLGLSCGI 737
Query: 748 IPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGK 807
IP+ANHDHARRVLYQSEKHS QAIG+S+TNPNIRVDTLSHQ+YYPQRPLFR++ISDCLGK
Sbjct: 738 IPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGK 797
Query: 808 AEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKA 867
+S G I+P E+FNGQ IVAVNVHLGYNQEDSLVMNRASLERGMFR++HIRSYK+
Sbjct: 798 PGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKS 857
Query: 868 EVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGT 927
EVDN ES +K+RK ED+V FGKMQSK+GRVD+LDDDGFP+IGANLQ+GDI+IGRCAESG
Sbjct: 858 EVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGV 917
Query: 928 DHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLES 987
DHS+KLKHTERGMVQKVV+SANDDGKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLG+LES
Sbjct: 918 DHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLES 977
Query: 988 QENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVEAI 1047
QENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG LR+ATPFSTLSV+AI
Sbjct: 978 QENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAI 1037
Query: 1048 TEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLT 1107
+QLHRAGFSRWG+ERVYNGRTGEM+R+LIFMGPTFYQRLIHM+EDKVKFRNTGPVHPLT
Sbjct: 1038 ADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLT 1097
Query: 1108 RQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVIQR 1167
RQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDS+ MH+CR+CKN++NVIQR
Sbjct: 1098 RQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQR 1157
Query: 1168 TVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
+V GG+K+RGPYCR+CES +E+VKV+VPYGAKLLCQELFSMGISL+F+TQLC
Sbjct: 1158 SVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198
BLAST of Spo15945.1 vs. UniProtKB/TrEMBL
Match:
A0A0B0MV80_GOSAR (DNA-directed RNA polymerase subunit beta OS=Gossypium arboreum GN=F383_08788 PE=3 SV=1)
HSP 1 Score: 1822.4 bits (4719), Expect = 0.000e+0
Identity = 871/1185 (73.50%), Postives = 1017/1185 (85.82%), Query Frame = 1
Query: 33 DVDMESDEDGDLMD--LDLHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNGI 92
D++M+ DED D+ D + + +LGE + +FC+KA+ +FF Q+GLISHQINSYN+F+ G+
Sbjct: 26 DLNMDIDEDDDVFDELVSVQELGEEFLRNFCRKAAVSFFNQYGLISHQINSYNDFIKYGL 85
Query: 93 QRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKDYMKL 152
Q FD+ E ++ GYDPSKKGEG WR+A VKFGKV +E P FW A G + + +
Sbjct: 86 QNTFDSFGEFVIHSGYDPSKKGEGDWRHARVKFGKVTVERPTFW------AVTGGNELNM 145
Query: 153 LPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRV 212
LPRHARLQNMTYS+R+KV LQ+YT + VKSDKFKTG+ E ++ ++ + E+I+GR+
Sbjct: 146 LPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFKTGREEIVEEEIVHQDNREIIIGRI 205
Query: 213 PVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYR 272
PVMV S++CWM++VEK DC+FDHGGYF++KGAEK FIAQEQI LKRLWISN W VAYR
Sbjct: 206 PVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIFIAQEQISLKRLWISNIQGWTVAYR 265
Query: 273 SEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDC 332
SE KR R+ ++LVEN K E I+GGEK+++V+F IE+P+WILFFALGV SDKEVV LID
Sbjct: 266 SEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIEIPVWILFFALGVRSDKEVVSLIDY 325
Query: 333 STDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFP 392
+ D ISNILFASI DAD KC FR + A+ ++D++ +E++FPP+E+ E LGKYLFP
Sbjct: 326 GSSDSSISNILFASIRDADWKCRNFREESAALNHLDRLRKETRFPPEESVEECLGKYLFP 385
Query: 393 SLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEK 452
SL G KQKARFL YMVKCLLQAF+G RKCDNRDDFRNKRLE A ELLERE++VH+ HA +
Sbjct: 386 SLKGFKQKARFLGYMVKCLLQAFTGHRKCDNRDDFRNKRLELAGELLEREMKVHIAHARR 445
Query: 453 RMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRR 512
RM K +QRDLY +R ++ IEHYLDASIVTNGL+R+FSTGAW+HP+K+ ER+SGVVANL R
Sbjct: 446 RMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGR 505
Query: 513 TNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLV 572
NPLQT+ D+RKTRQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKN+A T LV
Sbjct: 506 ANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALV 565
Query: 573 SSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRR 632
S++I K S+++TL GM+++V+D+S+SL GKDKV ++GEWVGVC DSL ELRR
Sbjct: 566 STNIVKSVVESIVDTLFDSGMEKVVNDTSSSLDGKDKVFLNGEWVGVCEDSLFFAAELRR 625
Query: 633 KRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDE-YSFEALLD 692
KRRR+ LP QVEIKRD EVRIF DAGRILRPLLVVENL ++K KG E Y+F+ LLD
Sbjct: 626 KRRRRELPYQVEIKRDEHKGEVRIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLD 685
Query: 693 KGIIDLIGTEEEEDCRTAWGIR-LLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFANHD 752
KGI++LIG EEEEDCRTAWGIR LL E +GK PVKY+HCELDMSFLLG+SCGIIPFANHD
Sbjct: 686 KGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHD 745
Query: 753 HARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGR 812
HARRVLYQ++KHS QAIG+S+TNPNIRVDTLSHQMYYPQRPLF ++ SDCLGK+ LG+
Sbjct: 746 HARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYYPQRPLFHTMTSDCLGKSGFPLGQ 805
Query: 813 NQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKES 872
N++ P E +NGQN IVAVNVHLGYNQEDSLVMNRAS+ERGMFRT+H+RSYKAEVDNKE
Sbjct: 806 NRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVRSYKAEVDNKEI 865
Query: 873 SEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSVKLK 932
EKRRK ED V+FGK +SK+GRVD+LDDDGFPYIGA+LQSGDI+IGR AESG DH VKLK
Sbjct: 866 QEKRRKAEDIVNFGKTESKIGRVDSLDDDGFPYIGASLQSGDIVIGRFAESGADHGVKLK 925
Query: 933 HTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFT 992
HTERGMVQKVVLS+NDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LES ENFPFT
Sbjct: 926 HTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESHENFPFT 985
Query: 993 KQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVEAITEQLHRA 1052
QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGS ++ATPFSTLS++AITEQLHR
Sbjct: 986 TQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKKHATPFSTLSIDAITEQLHRV 1045
Query: 1053 GFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADR 1112
GFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1046 GFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADR 1105
Query: 1113 KRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVIQRTVPGGKK 1172
KR+GGIKFGEMERDCLIAHGASANLHERLFTLSD SQMHVC+ CKN ANVI+RTV G+K
Sbjct: 1106 KRYGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHVCQNCKNAANVIERTVAAGRK 1165
Query: 1173 IRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
IRGPYCR C+S DE+VKVSVPYGAKLLCQELFSMGISL+F+TQLC
Sbjct: 1166 IRGPYCRVCQSGDEIVKVSVPYGAKLLCQELFSMGISLKFETQLC 1204
BLAST of Spo15945.1 vs. UniProtKB/TrEMBL
Match:
A0A0D2LUE5_GOSRA (DNA-directed RNA polymerase subunit beta OS=Gossypium raimondii GN=B456_001G037900 PE=3 SV=1)
HSP 1 Score: 1819.3 bits (4711), Expect = 0.000e+0
Identity = 877/1212 (72.36%), Postives = 1024/1212 (84.49%), Query Frame = 1
Query: 7 DGLGTSSKSRNDKEPF-DGIDLEMLWDDVDMESDEDGDLMD--LDLHDLGEASVMSFCKK 66
DG G E F +G DL +M+ DED D+ D + + +LGE + +FC+K
Sbjct: 6 DGKGNGGMGSTSGEKFANGTDL-------NMDIDEDDDVFDELVSVQELGEEFLRNFCRK 65
Query: 67 ASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKF 126
A+ +FF Q+GL+SHQINSYN+F+ G+Q FD+ E ++ GYDPSKKGEG WR+A VKF
Sbjct: 66 AAVSFFNQYGLVSHQINSYNDFIKYGLQNTFDSFGEFVIHSGYDPSKKGEGDWRHARVKF 125
Query: 127 GKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSD 186
GKV +E P FW A G + + +LPRHARLQNMTYS+R+KV LQ+YT + VKSD
Sbjct: 126 GKVTVERPTFW------AVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSD 185
Query: 187 KFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCEFDHGGYFIVKGAE 246
KFKTG+ E ++ ++ + E+I+GR+PVMV S++CWM++VEK DC+FDHGGYF++KGAE
Sbjct: 186 KFKTGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAE 245
Query: 247 KTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFS 306
K FIAQEQI LKRLWISN W VAYRSE KR R+ ++LVEN K E I+GGEK+++V+F
Sbjct: 246 KIFIAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFL 305
Query: 307 IIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKCDGFRRGAKAME 366
IE+P+WILFFALGV SDKEVV LID + D ISNILFASI DAD KC FR + A+
Sbjct: 306 SIEIPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRNFREESAALN 365
Query: 367 YIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRD 426
++D++ +E++FPP+E+ E LGKYLFPSL G KQKARFL YMVK LLQAF+G RKCDNRD
Sbjct: 366 HLDRLRKETRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKSLLQAFTGHRKCDNRD 425
Query: 427 DFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLT 486
DFRNKRLE A ELLERE++VH+ HA +RM K +QRDLY +R ++ IEHYLDASIVTNGL+
Sbjct: 426 DFRNKRLELAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLS 485
Query: 487 RSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSH 546
R+FSTGAW+HP+K+ ER+SGVVANL R NPLQT+ D+RKTRQQV YTGKVGDARYPHPSH
Sbjct: 486 RAFSTGAWSHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSH 545
Query: 547 WGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLS 606
WGK+CFLSTPDGENCGLVKN+A T LVS++I K S+++TL GM+++V+D+S+SL
Sbjct: 546 WGKVCFLSTPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKVVNDTSSSLD 605
Query: 607 GKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILR 666
GKDKV ++GEWVGVC DSL ELRRKRRRK LP QVEIKRD EVRIF DAGRILR
Sbjct: 606 GKDKVFLNGEWVGVCEDSLFFAAELRRKRRRKELPYQVEIKRDEHKGEVRIFTDAGRILR 665
Query: 667 PLLVVENLKRIKLLKGDE-YSFEALLDKGIIDLIGTEEEEDCRTAWGIR-LLYEDKGKGP 726
PLLVVENL ++K KG E Y+F+ LLDKGI++LIG EEEEDCRTAWGIR LL E +GK P
Sbjct: 666 PLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQP 725
Query: 727 VKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSH 786
VKY+HCELDMSFLLG+SCGIIPFANHDHARRVLYQ++KHS QAIG+S+TNPNIRVDTLSH
Sbjct: 726 VKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSH 785
Query: 787 QMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVM 846
QMYYPQRPLF ++ +DCLGK+ LG+N++ P E +NGQN IVAVNVHLGYNQEDSLVM
Sbjct: 786 QMYYPQRPLFHTMTADCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVM 845
Query: 847 NRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPY 906
NRAS+ERGMFRT+H+RSYKAEVDNKE EKRRK ED V+FGK +SK+GRVD+LDDDGFPY
Sbjct: 846 NRASIERGMFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGKTESKIGRVDSLDDDGFPY 905
Query: 907 IGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPC 966
IGA+LQSGDI+IGR AESG DH VKLKHTERGMVQKVVLS+NDDGKNFAVVSLRQVRSPC
Sbjct: 906 IGASLQSGDIVIGRFAESGADHGVKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPC 965
Query: 967 LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1026
LGDKFSSMHGQKGVLG+LES ENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGI
Sbjct: 966 LGDKFSSMHGQKGVLGFLESHENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1025
Query: 1027 ACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 1086
ACGGS ++ATPFSTLS++AITEQLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL
Sbjct: 1026 ACGGSKKHATPFSTLSIDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRL 1085
Query: 1087 IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 1146
+HM+EDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGASANLHERLFTLS
Sbjct: 1086 VHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLFTLS 1145
Query: 1147 DSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFS 1206
D SQMHVC+ CKN ANVI+RTV G+KIRGPYCR C+S DE+VKVSVPYGAKLLCQELFS
Sbjct: 1146 DCSQMHVCQNCKNAANVIERTVAAGRKIRGPYCRVCQSGDEIVKVSVPYGAKLLCQELFS 1204
Query: 1207 MGISLRFDTQLC 1214
MGISL+F+TQLC
Sbjct: 1206 MGISLKFETQLC 1204
BLAST of Spo15945.1 vs. ExPASy Swiss-Prot
Match:
NRPD2_ARATH (DNA-directed RNA polymerases IV and V subunit 2 OS=Arabidopsis thaliana GN=NRPD2 PE=1 SV=1)
HSP 1 Score: 1594.7 bits (4128), Expect = 0.000e+0
Identity = 778/1199 (64.89%), Postives = 955/1199 (79.65%), Query Frame = 1
Query: 33 DVDMESDEDGDLM--DLDLHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNGI 92
D+D++ E+ + +++L +LGE + SFCKKA+ +FF ++GLISHQ+NSYN F+ +G+
Sbjct: 5 DIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIEHGL 64
Query: 93 QRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKDYMKL 152
Q VF + E+ V P +D KK + WRYA+VKFG+V +E P F++ +K ++
Sbjct: 65 QNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDK--------ELEF 124
Query: 153 LPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRV 212
LP HARLQNMTYSAR+KV +++++ VKSDKFKTG+ Y+++ +L + ++++G +
Sbjct: 125 LPWHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSI 184
Query: 213 PVMVNSDICWMSK-----VEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYW 272
PVMV S +C S+ +KGDC FD GGYF++KGAEK FIAQEQ+C KRLWISN P W
Sbjct: 185 PVMVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-W 244
Query: 273 KVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVV 332
V++RSE KR R V+L EN KAE+ + EKV++VYF E+P+W+LFFALGVSSDKE +
Sbjct: 245 TVSFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAM 304
Query: 333 ELIDCSTDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLG 392
+LI DD I+N L ASIH AD C+ FR G A+ Y++Q I+ +KFPP E+ E L
Sbjct: 305 DLIAFDGDDASITNSLIASIHVADAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLH 364
Query: 393 KYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHM 452
YLFP L K+KARFL YMVKCLL +++G+RKC+NRD FRNKR+E A ELLERE+RVH+
Sbjct: 365 LYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHL 424
Query: 453 RHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVV 512
HA ++M +AMQ+ L G+ DL+ IEHYLDAS++TNGL+R+FSTGAW+HPF++ ERVSGVV
Sbjct: 425 AHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVV 484
Query: 513 ANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIA 572
ANL R NPLQT+ D+R+TRQQV YTGKVGDARYPHPSHWG++CFLSTPDGENCGLVKN++
Sbjct: 485 ANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMS 544
Query: 573 ATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVV 632
GLVS+ + S++E L CGM+ L+ D+ T L GK KVL++G+WVG+C+DS V
Sbjct: 545 LLGLVST----QSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFV 604
Query: 633 EELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFE 692
EL+ +RR+ LP ++EIKRD + EVRIF DAGR+LRPLLVVENL+++K K +Y F+
Sbjct: 605 AELKSRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFD 664
Query: 693 ALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFA 752
LLD GI++LIG EEEEDC TAWGI+ L K P Y+HCELD+SFLLGVSC ++PFA
Sbjct: 665 HLLDHGILELIGIEEEEDCNTAWGIKQLL----KEPKIYTHCELDLSFLLGVSCAVVPFA 724
Query: 753 NHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHS 812
NHDH RRVLYQS+KH QAIG+SSTNPNIR DTLS Q++YPQ+PLF+++ S+CL K
Sbjct: 725 NHDHGRRVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLKK---- 784
Query: 813 LGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDN 872
++L FNGQN IVAVNVHLGYNQEDS+VMN+ASLERGMFR++ IRSYKAEVD
Sbjct: 785 ----EVL-----FNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDA 844
Query: 873 KESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSV 932
K+ SEKR+K ++ V FGK SK+G+VD+L+DDGFP+IGAN+ +GDI+IGRC ESG DHS+
Sbjct: 845 KD-SEKRKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSI 904
Query: 933 KLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENF 992
KLKHTERG+VQKVVLS+ND+GKNFA VSLRQVRSPCLGDKFSSMHGQKGVLGYLE Q+NF
Sbjct: 905 KLKHTERGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNF 964
Query: 993 PFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC-----GGS------LRYATPFS 1052
PFT QGIVPDIVINPHAFPSRQTPGQLLEAAL KGIAC G S R+ATPFS
Sbjct: 965 PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFS 1024
Query: 1053 TLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNT 1112
T V ITEQLHRAGFSRWGNERVYNGR+GEM+R++IFMGPTFYQRL+HMSEDKVKFRNT
Sbjct: 1025 TPGVTEITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNT 1084
Query: 1113 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKN 1172
GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH+CRKCK
Sbjct: 1085 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKT 1144
Query: 1173 LANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
ANVI+RT G+KIRGPYCR C S D VV+V VPYGAKLLCQELFSMGI+L FDT+LC
Sbjct: 1145 YANVIERTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172
BLAST of Spo15945.1 vs. ExPASy Swiss-Prot
Match:
RPD2B_ARATH (DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b PE=2 SV=1)
HSP 1 Score: 1464.9 bits (3791), Expect = 0.000e+0
Identity = 710/1057 (67.17%), Postives = 859/1057 (81.27%), Query Frame = 1
Query: 174 IYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSK-----VEKGD 233
++ + +K DKFKTG+ EY+++ +L + ++++G +PVMV S +C S+ +KG+
Sbjct: 86 VFKKIVIKHDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVKSVLCKTSEKGKENCKKGN 145
Query: 234 CEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKA 293
C FD GGYF++KGAEK FIAQEQ+C KRLWISN P W V++RSE KR R V+L EN KA
Sbjct: 146 CAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-WTVSFRSETKRNRFIVRLSENEKA 205
Query: 294 ENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDA 353
E+ + EKV++VYF E+P+W+LFFALGVSSDKE ++LI DD I+N L ASIH+A
Sbjct: 206 EDYKIMEKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEA 265
Query: 354 DEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVKC 413
D C+ FR G A+ Y++ I+ +KFPP E+ + L YLFP L G K+KARFL YMVKC
Sbjct: 266 DAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCLRLYLFPCLQGLKKKARFLGYMVKC 325
Query: 414 LLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQS 473
LL A++G+RKC+NRD FRNKR+E A ELLERE+RVH+ HA ++M +AMQ+ L G+ DL+
Sbjct: 326 LLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKP 385
Query: 474 IEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQVS 533
IEHYLDAS++TNGL R+FSTGAW+HPF++ ERVSGVVANL R NPLQT+ D+R+TRQQV
Sbjct: 386 IEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVL 445
Query: 534 YTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLLR 593
YTGKVGDAR+PHPSHWG++CFLSTPDGENCGLVKN++ GLVS+ + S++E L
Sbjct: 446 YTGKVGDARHPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVST----QGLESVVEMLFT 505
Query: 594 CGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDVQ 653
CGM+ L++D+ST L GK KVL++G+WVG+C+DS V EL+ +RR+ LP ++EIKRD
Sbjct: 506 CGMEELMNDTSTPLCGKHKVLLNGDWVGLCADSESFVGELKSRRRQSELPLEMEIKRDKD 565
Query: 654 NAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAW 713
+ EVRIF DAGR+LRPLLVVENL ++K K +Y F+ LLD+GI++LIG EEEEDC TAW
Sbjct: 566 DNEVRIFTDAGRLLRPLLVVENLHKLKQDKPTQYPFKHLLDQGILELIGIEEEEDCTTAW 625
Query: 714 GIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYS 773
GI+ L K P Y+HCELD+SFLLGVSC I+PFANHDH +RVLYQS+KH QAIG+S
Sbjct: 626 GIKQLL----KEPKNYTHCELDLSFLLGVSCAIVPFANHDHGKRVLYQSQKHCQQAIGFS 685
Query: 774 STNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVN 833
STNPNIR DTLS Q++YPQ+PLF+++ S+CL K ++L FNGQN IVAVN
Sbjct: 686 STNPNIRCDTLSQQLFYPQKPLFKTLASECLEK--------EVL-----FNGQNAIVAVN 745
Query: 834 VHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKL 893
VHLGYNQEDS+VMN+ASLERGMFR++ IRSYKAEVD K+ SEKR+K ++ V FGK SK+
Sbjct: 746 VHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDTKD-SEKRKKMDELVQFGKTYSKI 805
Query: 894 GRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKN 953
G+VD+L+DDGFP+IGAN+ +GDI+IGRC ESG DHS+KLKHTERG+VQKVVLS+ND+GKN
Sbjct: 806 GKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEGKN 865
Query: 954 FAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQT 1013
FA VSLRQVRSPCLGDKFSSMHGQKGVLGYLE Q+NFPFT QGIVPDIVINPHAFPSRQT
Sbjct: 866 FAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQT 925
Query: 1014 PGQLLEAALGKGIAC------GGS------LRYATPFSTLSVEAITEQLHRAGFSRWGNE 1073
PGQLLEAAL KGIAC G S R+ATPFST V ITEQLHRAGFSRWGNE
Sbjct: 926 PGQLLEAALSKGIACPIQKKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNE 985
Query: 1074 RVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 1133
RVYNGR+GEM+R+LIFMGPTFYQRL+HMSE+KVKFRNTGPVHPLTRQPVADRKRFGGI+F
Sbjct: 986 RVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVADRKRFGGIRF 1045
Query: 1134 GEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANVIQRTVPGGKKIRGPYCRF 1193
GEMERDCLIAHGASANLHERLFTLSDSSQMH+CRKCK ANVI+RT G+KIRGPYCR
Sbjct: 1046 GEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRV 1105
Query: 1194 CESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
C S D VV+V VPYGAKLLCQELFSMGI+L FDT+LC
Sbjct: 1106 CASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1119
BLAST of Spo15945.1 vs. ExPASy Swiss-Prot
Match:
NRPB2_ARATH (DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana GN=NRPB2 PE=1 SV=2)
HSP 1 Score: 644.8 bits (1662), Expect = 1.900e-183
Identity = 412/1201 (34.30%), Postives = 638/1201 (53.12%), Query Frame = 1
Query: 66 AAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPG--YDPSKKGEGGWRYASVKF 125
+A+F++ GL+ Q++S++ F+ N +Q + D +I + P ++P + + + F
Sbjct: 31 SAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKISF 90
Query: 126 GKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSD 185
G++ L PM E + L P+ ARL+N+TYSA L V+ T+ +K
Sbjct: 91 GQIYLSKPMM-------TESDGETATLFPKAARLRNLTYSAPLYVDV-----TKRVIK-- 150
Query: 186 KFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSK------VEKGDCEFDHGGYF 245
K E + T + T+V +G+VP+M+ S C + + E G+C +D GGYF
Sbjct: 151 --KGHDGEEVTET---QDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYF 210
Query: 246 IVKGAEKTFIAQEQICLKRLWI--SNEPYWKVAYRSEFKRRR---------VHVKLVENP 305
I+ G+EK IAQE++ +++ +P K AY E + + V+++
Sbjct: 211 IINGSEKVLIAQEKMSTNHVYVFKKRQPN-KYAYVGEVRSMAENQNRPPSTMFVRMLARA 270
Query: 306 KAENIQGGEKV-ISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASI 365
A+ G+ + ++ + E+PI I+F ALG +DK+++E I D ++ +L S+
Sbjct: 271 SAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSL 330
Query: 366 HDADEKCDGFRRGAKAMEYIDQM---IRESKFPPDETTAEYLGKYLFPSLSGNK----QK 425
+A + A++YI + + +K + + L K + P + + +K
Sbjct: 331 EEAFV----IQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKK 390
Query: 426 ARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQR 485
A + Y++ LL GRR D+RD + NKRL+ A LL R+ R + + +Q+
Sbjct: 391 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 450
Query: 486 DLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTIC 545
+ +++ +++ + A +T+GL S +TG W R +GV L R T+
Sbjct: 451 CVDNGKEV-NLQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLS 510
Query: 546 DMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEE 605
+R+ + GK+ R H S WG +C TP+G+ CGLVKN+A ++
Sbjct: 511 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG---SA 570
Query: 606 RVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLP 665
+LE L G + S + + K+ V+G WVGV D +V+ LRR RRR +
Sbjct: 571 AYPILEFLEEWGTENFEEISPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVN 630
Query: 666 CQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFEA-----------L 725
+V + RD++ E+RI+ D GR RPL +V+N +++ + K D Y+ + L
Sbjct: 631 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVDN-QKLLIKKRDIYALQQRESAEEDGWHHL 690
Query: 726 LDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG----PVKYSHCELDMSFLLGVSCGIIP 785
+ KG I+ I TEEEE + I L + + + Y+HCE+ S +LGV IIP
Sbjct: 691 VAKGFIEYIDTEEEETTMISMTISDLVQARLRPEEAYTENYTHCEIHPSLILGVCASIIP 750
Query: 786 FANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAE 845
F +H+ + R YQS QA+G TN R+DTL++ +YYPQ+PL + +A
Sbjct: 751 FPDHNQSPRNTYQSAM-GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT-------RAM 810
Query: 846 HSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEV 905
L Q LP G N IVA++ + GYNQEDS++MN++S++RG FR+ RSY+ E
Sbjct: 811 EHLHFRQ-LP-----AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDE- 870
Query: 906 DNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAE----- 965
+ K + + F M + G D LDDDG G + D+IIG+
Sbjct: 871 EKKMGTLVKEDFGRPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDE 930
Query: 966 --------SGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMH 1025
+ DHS+ L+H+E GMV +V+L+ N DG F V +R VR P +GDKFSS H
Sbjct: 931 AQGQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRH 990
Query: 1026 GQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYA 1085
GQKG +G +QE+ P+T +G+ PDI++NPHA PSR T GQL+E +GK A G A
Sbjct: 991 GQKGTVGMTYTQEDMPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDA 1050
Query: 1086 TPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVK 1145
TPF+ ++V+ I++ LH+ G+ G ER+YNG TG + +IF+GPT+YQRL HM +DK+
Sbjct: 1051 TPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIH 1110
Query: 1146 FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCR 1205
R GPV LTRQP R R GG++FGEMERDC+IAHGA+ L ERLF SD+ ++HVC
Sbjct: 1111 SRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE 1170
Query: 1206 KCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDT 1212
C +A K CR C++ ++V+V +PY KLL QEL SM I+ R T
Sbjct: 1171 VCGLIA-------IANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLT 1179
BLAST of Spo15945.1 vs. ExPASy Swiss-Prot
Match:
RPB2_SOLLC (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum GN=RPB2 PE=2 SV=1)
HSP 1 Score: 642.1 bits (1655), Expect = 1.200e-182
Identity = 412/1203 (34.25%), Postives = 635/1203 (52.78%), Query Frame = 1
Query: 66 AAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPG--YDPSKKGEGGWRYASVKF 125
+A+F++ GL+ Q++S++ F+ N +Q + D +I + P ++P + + + F
Sbjct: 30 SAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKINF 89
Query: 126 GKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSD 185
G++ L PM E + L P+ ARL+N+TYSA L V+ T+ +K
Sbjct: 90 GQIYLSKPMM-------TESDGETATLFPKAARLRNLTYSAPLYVDV-----TKRVIK-- 149
Query: 186 KFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSK------VEKGDCEFDHGGYF 245
K E + T + T+V +G+VP+M+ S C + + E G+C D GGYF
Sbjct: 150 --KGHDGEEVTET---QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYF 209
Query: 246 IVKGAEKTFIAQEQICLKRLWI--SNEPYWKVAYRSEFKRRR---------VHVKLVENP 305
I+ G+EK IAQE++ +++ +P K A+ +E + + V+++
Sbjct: 210 IINGSEKVLIAQEKMSTNHVYVFKKRQPN-KYAFVAEVRSMADTQNRPPSTMFVRMLSRT 269
Query: 306 KAENIQGGEKV-ISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASI 365
A+ G+ + ++ + E+PI I+F ALG +DK+++E I +D ++ +L S+
Sbjct: 270 SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSL 329
Query: 366 HDADEKCDGFRRGAKAMEYIDQ------MIRESKFPPDETTAEYLGKYLFPSLSGNK--- 425
+A + A++YI + + RE + + E L K + P + +
Sbjct: 330 EEAFV----IQNQQVALDYIGKRGATVGVTREKRI---KYAKEILQKEMLPHVGVGEYCE 389
Query: 426 -QKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKA 485
+KA + Y++ LL GRR D+RD + NKRL+ A LL R+ R + +
Sbjct: 390 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 449
Query: 486 MQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQ 545
+Q+ + +D+ +++ + A +T+GL S +TG W R +GV L R
Sbjct: 450 VQKCVDNGKDV-NLQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYAS 509
Query: 546 TICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSIS 605
T+ +R+ + GK+ R H S WG +C TP+G+ CGLVKN+A ++ +
Sbjct: 510 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 569
Query: 606 KEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRK 665
+LE L G + S + K+ V+G WVG+ D +V LRR RRR
Sbjct: 570 A---YPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRV 629
Query: 666 RLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENL------KRIKLLKG----DEYSFE 725
+ +V + RD++ E+RI+ D GR RPL +VE K I+ L+ DE +
Sbjct: 630 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWH 689
Query: 726 ALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDK-GKGPV---KYSHCELDMSFLLGVSCGI 785
L+ KG I+ I TEEEE + I L + + G Y+HCE+ S +LGV I
Sbjct: 690 DLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASI 749
Query: 786 IPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGK 845
IPF +H+ + R YQS QA+G TN R+DTL++ +YYPQ+PL + +
Sbjct: 750 IPFPDHNQSPRNTYQSAMGK-QAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT-------R 809
Query: 846 AEHSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKA 905
A L Q+ + N IVA++ + GYNQEDS++MN++S++RG FR+ RSY+
Sbjct: 810 AMEHLHFRQLPAGI------NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRD 869
Query: 906 EVDNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAE--- 965
E + K + + F M + G D LDDDG G + D+IIG+
Sbjct: 870 E-EKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQ 929
Query: 966 ----------SGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSS 1025
+ DHS L+H+E GMV +V+L+ N DG F V +R VR P +GDKFSS
Sbjct: 930 DDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSS 989
Query: 1026 MHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLR 1085
HGQKG +G +QE+ P+T +GI PDI++NPHA PSR T GQL+E +GK A G
Sbjct: 990 RHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEG 1049
Query: 1086 YATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDK 1145
ATPF+ ++V+ I++ LH+ G+ G E +YNG TG + +IF+GPT+YQRL HM +DK
Sbjct: 1050 DATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDK 1109
Query: 1146 VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHV 1205
+ R GPV LTRQP R R GG++FGEMERDC+IAHGA+ L ERLF SD+ ++HV
Sbjct: 1110 IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHV 1169
Query: 1206 CRKCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRF 1212
C +C +A K CR C++ ++V+V +PY KLL QEL +M I+ R
Sbjct: 1170 CERCGLIA-------IANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1178
BLAST of Spo15945.1 vs. ExPASy Swiss-Prot
Match:
RPB2_DICDI (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1)
HSP 1 Score: 634.8 bits (1636), Expect = 1.900e-180
Identity = 407/1198 (33.97%), Postives = 632/1198 (52.75%), Query Frame = 1
Query: 66 AAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPG--YDPSKKG-EGGWRYASVK 125
+A+F++ GL+ Q++S++ F+ N +Q + D I++ P + P + SVK
Sbjct: 28 SAYFQEKGLVRQQLDSFDEFIQNTMQEIIDESPPITLRPESQHHPGQAVVSNNVSTFSVK 87
Query: 126 FGKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKS 185
FG++ L P AE ++ P AR++N+TYSA L V+ + T K K
Sbjct: 88 FGQIYLSKPT--------AEIDGVSQQVTPNQARIRNLTYSAPLFVDITKTVMTGSKSKG 147
Query: 186 DKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEK------GDCEFDHGGY 245
D+ +T + VLK + +G+VP+M+ S C +++ + G+C FD GGY
Sbjct: 148 DERRTDE-------VLK----RIFIGKVPIMLRSQYCMLNEADDRDLTTMGECSFDQGGY 207
Query: 246 FIVKGAEKTFIAQEQICLKRLWI-SNEPYWKVAYRSEFKRRR---------VHVKLVENP 305
FI+ G+EK IAQE++ +++ P K +Y +E + + +++K++ N
Sbjct: 208 FIINGSEKVLIAQEKMNNNHVYVFKKSPPSKYSYVAEIRSCQETGSRPTSTMYLKMLHNT 267
Query: 306 KAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIH 365
+ G K Y +VP+ I+F ALG +DK+++E I D ++ +++ S+
Sbjct: 268 NKGPV--GIKATVPYIKQ-DVPVIIVFRALGFVADKDILEHICYDFKDAQMMDLMRPSLE 327
Query: 366 DA------DEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNK---- 425
++ + D + M +Q I+ ++ E L K + P +S +
Sbjct: 328 ESFVIQSQEVALDYLGKRGSTMGTREQRIKFAR--------EVLQKEMLPHVSVAEFYET 387
Query: 426 QKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAM 485
+KA + Y+ LL A RR D+RD F NKRL+ A LL R + K + +
Sbjct: 388 KKAFYFGYITHRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYL 447
Query: 486 QRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQT 545
QR + +++ + + + +T+GL S +TG W K SGV L R T
Sbjct: 448 QRCIDKDKEFIA-SSAVKSKTITSGLKYSLATGNWGSS-KSGGTKSGVAQVLNRLTFAST 507
Query: 546 ICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISK 605
+ +R+ + GK+ R H +HWG +C TP+G+ CGLVKN+A +S +
Sbjct: 508 LSHLRRLNTPIGREGKLAKPRQLHNTHWGIVCPSETPEGQACGLVKNLAMMSYISVGSAS 567
Query: 606 EERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKR 665
+ + LE ++ + +S+ K+ V+G WVG+ K++ LR RR
Sbjct: 568 QPILEFLEEWTTENLEEI--SDLSSIFSATKIFVNGMWVGIHHQPDKLLSTLRLLRRCGD 627
Query: 666 LPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRI-------KLLKGDEYSFEALLD 725
+ +V + RD++ E+R++ D GR RPL VV++ K KL+ DEY ++ LL
Sbjct: 628 VSVEVSVVRDIREKELRLYTDPGRCCRPLFVVQDNKVQIKKQHINKLINNDEYKWQDLLS 687
Query: 726 KGIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVK-YSHCELDMSFLLGVSCGIIPFANHD 785
+GI++ I EEEE A L + V Y+HCE+ S +LG+ C IIPF +H+
Sbjct: 688 EGIVEYIDAEEEETVLIAMTPEDLVPMPNEQIVHTYTHCEIHPSMILGICCSIIPFPDHN 747
Query: 786 HARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGR 845
+ R YQ+ QA+G TN +R+DT++H ++YPQ+PL + + L E
Sbjct: 748 QSPRNTYQAAMGK-QAMGVYITNYQLRMDTMAHVLFYPQKPLVTTRSMEYLHFRE----- 807
Query: 846 NQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKES 905
LP GQN VA+ + GYNQEDS+++N+++++RG+FR+ R+YK E K++
Sbjct: 808 ---LPA-----GQNVCVAIACYSGYNQEDSVILNQSAIDRGLFRSMFYRAYKDE-QKKQT 867
Query: 906 SEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCA----------- 965
S FE + G + +DDDG G + DIIIG+
Sbjct: 868 SLMEEVFEKPERDTCAGMRHGSYEKIDDDGLVAPGVRVAGDDIIIGKTTPLPPSDDDLGP 927
Query: 966 ----ESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQK 1025
+ D S L+ +E G+V +V+L+ + +G F V +R +R P +GDKFSS HGQK
Sbjct: 928 KTRRHTKRDSSTALRSSETGIVDQVILTTSGEGFKFCKVRVRSMRVPQIGDKFSSRHGQK 987
Query: 1026 GVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPF 1085
G G QE+ PFT +GIVPDI++NPHA PSR T GQL+E LGK A G ATPF
Sbjct: 988 GTCGMAYRQEDLPFTVEGIVPDIIVNPHAIPSRMTIGQLIECLLGKVSASTGDEGDATPF 1047
Query: 1086 STLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRN 1145
+ ++VEAI++ LH+ G+ G+E +YNG TG + IF+GPT+YQRL HM +DK+ R+
Sbjct: 1048 TDVTVEAISQALHKIGYQMTGHEVMYNGHTGRRMDAQIFIGPTYYQRLKHMVDDKIHSRS 1107
Query: 1146 TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCK 1205
GPV LTRQPV R R GG++FGEMERDC+I+HGA+ L ERLF SDS ++H+C C
Sbjct: 1108 RGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGAAQFLKERLFDQSDSYRVHICDICG 1167
Query: 1206 NLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQ 1212
+A K CR C++ ++ ++ +PY AKLL QEL SM I+ R TQ
Sbjct: 1168 LIA-------IANLKKNSFECRRCKNKTQISQIRMPYAAKLLFQELMSMSIAPRMFTQ 1169
BLAST of Spo15945.1 vs. TAIR (Arabidopsis)
Match:
AT3G23780.1 (nuclear RNA polymerase D2A)
HSP 1 Score: 1594.7 bits (4128), Expect = 0.000e+0
Identity = 778/1199 (64.89%), Postives = 955/1199 (79.65%), Query Frame = 1
Query: 33 DVDMESDEDGDLM--DLDLHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNGI 92
D+D++ E+ + +++L +LGE + SFCKKA+ +FF ++GLISHQ+NSYN F+ +G+
Sbjct: 5 DIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIEHGL 64
Query: 93 QRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKDYMKL 152
Q VF + E+ V P +D KK + WRYA+VKFG+V +E P F++ +K ++
Sbjct: 65 QNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDK--------ELEF 124
Query: 153 LPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRV 212
LP HARLQNMTYSAR+KV +++++ VKSDKFKTG+ Y+++ +L + ++++G +
Sbjct: 125 LPWHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSI 184
Query: 213 PVMVNSDICWMSK-----VEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYW 272
PVMV S +C S+ +KGDC FD GGYF++KGAEK FIAQEQ+C KRLWISN P W
Sbjct: 185 PVMVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-W 244
Query: 273 KVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVV 332
V++RSE KR R V+L EN KAE+ + EKV++VYF E+P+W+LFFALGVSSDKE +
Sbjct: 245 TVSFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAM 304
Query: 333 ELIDCSTDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLG 392
+LI DD I+N L ASIH AD C+ FR G A+ Y++Q I+ +KFPP E+ E L
Sbjct: 305 DLIAFDGDDASITNSLIASIHVADAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLH 364
Query: 393 KYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHM 452
YLFP L K+KARFL YMVKCLL +++G+RKC+NRD FRNKR+E A ELLERE+RVH+
Sbjct: 365 LYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHL 424
Query: 453 RHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVV 512
HA ++M +AMQ+ L G+ DL+ IEHYLDAS++TNGL+R+FSTGAW+HPF++ ERVSGVV
Sbjct: 425 AHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVV 484
Query: 513 ANLRRTNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIA 572
ANL R NPLQT+ D+R+TRQQV YTGKVGDARYPHPSHWG++CFLSTPDGENCGLVKN++
Sbjct: 485 ANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMS 544
Query: 573 ATGLVSSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVV 632
GLVS+ + S++E L CGM+ L+ D+ T L GK KVL++G+WVG+C+DS V
Sbjct: 545 LLGLVST----QSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFV 604
Query: 633 EELRRKRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFE 692
EL+ +RR+ LP ++EIKRD + EVRIF DAGR+LRPLLVVENL+++K K +Y F+
Sbjct: 605 AELKSRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFD 664
Query: 693 ALLDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFA 752
LLD GI++LIG EEEEDC TAWGI+ L K P Y+HCELD+SFLLGVSC ++PFA
Sbjct: 665 HLLDHGILELIGIEEEEDCNTAWGIKQLL----KEPKIYTHCELDLSFLLGVSCAVVPFA 724
Query: 753 NHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHS 812
NHDH RRVLYQS+KH QAIG+SSTNPNIR DTLS Q++YPQ+PLF+++ S+CL K
Sbjct: 725 NHDHGRRVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLKK---- 784
Query: 813 LGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDN 872
++L FNGQN IVAVNVHLGYNQEDS+VMN+ASLERGMFR++ IRSYKAEVD
Sbjct: 785 ----EVL-----FNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDA 844
Query: 873 KESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSV 932
K+ SEKR+K ++ V FGK SK+G+VD+L+DDGFP+IGAN+ +GDI+IGRC ESG DHS+
Sbjct: 845 KD-SEKRKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSI 904
Query: 933 KLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENF 992
KLKHTERG+VQKVVLS+ND+GKNFA VSLRQVRSPCLGDKFSSMHGQKGVLGYLE Q+NF
Sbjct: 905 KLKHTERGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNF 964
Query: 993 PFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC-----GGS------LRYATPFS 1052
PFT QGIVPDIVINPHAFPSRQTPGQLLEAAL KGIAC G S R+ATPFS
Sbjct: 965 PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFS 1024
Query: 1053 TLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNT 1112
T V ITEQLHRAGFSRWGNERVYNGR+GEM+R++IFMGPTFYQRL+HMSEDKVKFRNT
Sbjct: 1025 TPGVTEITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNT 1084
Query: 1113 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKN 1172
GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH+CRKCK
Sbjct: 1085 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKT 1144
Query: 1173 LANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
ANVI+RT G+KIRGPYCR C S D VV+V VPYGAKLLCQELFSMGI+L FDT+LC
Sbjct: 1145 YANVIERTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172
BLAST of Spo15945.1 vs. TAIR (Arabidopsis)
Match:
AT3G18090.1 (nuclear RNA polymerase D2B)
HSP 1 Score: 1489.2 bits (3854), Expect = 0.000e+0
Identity = 722/1075 (67.16%), Postives = 875/1075 (81.40%), Query Frame = 1
Query: 156 RLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVN 215
RLQNMTYSAR+KV +++++ + +K DKFKTG+ EY+++ +L + ++++G +PVMV
Sbjct: 4 RLQNMTYSARIKVNAQVEVFKKIVIKHDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVK 63
Query: 216 SDICWMSK-----VEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYR 275
S +C S+ +KG+C FD GGYF++KGAEK FIAQEQ+C KRLWISN P W V++R
Sbjct: 64 SVLCKTSEKGKENCKKGNCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-WTVSFR 123
Query: 276 SEFKRRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDC 335
SE KR R V+L EN KAE+ + EKV++VYF E+P+W+LFFALGVSSDKE ++LI
Sbjct: 124 SETKRNRFIVRLSENEKAEDYKIMEKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAF 183
Query: 336 STDDGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFP 395
DD I+N L ASIH+AD C+ FR G A+ Y++ I+ +KFPP E+ + L YLFP
Sbjct: 184 DGDDASITNSLIASIHEADAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCLRLYLFP 243
Query: 396 SLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEK 455
L G K+KARFL YMVKCLL A++G+RKC+NRD FRNKR+E A ELLERE+RVH+ HA +
Sbjct: 244 CLQGLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARR 303
Query: 456 RMVKAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRR 515
+M +AMQ+ L G+ DL+ IEHYLDAS++TNGL R+FSTGAW+HPF++ ERVSGVVANL R
Sbjct: 304 KMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGVVANLGR 363
Query: 516 TNPLQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLV 575
NPLQT+ D+R+TRQQV YTGKVGDAR+PHPSHWG++CFLSTPDGENCGLVKN++ GLV
Sbjct: 364 ANPLQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLV 423
Query: 576 SSSISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRR 635
S+ + S++E L CGM+ L++D+ST L GK KVL++G+WVG+C+DS V EL+
Sbjct: 424 ST----QGLESVVEMLFTCGMEELMNDTSTPLCGKHKVLLNGDWVGLCADSESFVGELKS 483
Query: 636 KRRRKRLPCQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFEALLDK 695
+RR+ LP ++EIKRD + EVRIF DAGR+LRPLLVVENL ++K K +Y F+ LLD+
Sbjct: 484 RRRQSELPLEMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPTQYPFKHLLDQ 543
Query: 696 GIIDLIGTEEEEDCRTAWGIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFANHDHA 755
GI++LIG EEEEDC TAWGI+ L K P Y+HCELD+SFLLGVSC I+PFANHDH
Sbjct: 544 GILELIGIEEEEDCTTAWGIKQLL----KEPKNYTHCELDLSFLLGVSCAIVPFANHDHG 603
Query: 756 RRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQ 815
+RVLYQS+KH QAIG+SSTNPNIR DTLS Q++YPQ+PLF+++ S+CL K +
Sbjct: 604 KRVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLEK--------E 663
Query: 816 ILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKESSE 875
+L FNGQN IVAVNVHLGYNQEDS+VMN+ASLERGMFR++ IRSYKAEVD K+ SE
Sbjct: 664 VL-----FNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDTKD-SE 723
Query: 876 KRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSVKLKHT 935
KR+K ++ V FGK SK+G+VD+L+DDGFP+IGAN+ +GDI+IGRC ESG DHS+KLKHT
Sbjct: 724 KRKKMDELVQFGKTYSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHT 783
Query: 936 ERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTKQ 995
ERG+VQKVVLS+ND+GKNFA VSLRQVRSPCLGDKFSSMHGQKGVLGYLE Q+NFPFT Q
Sbjct: 784 ERGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQ 843
Query: 996 GIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC------GGS------LRYATPFSTLSV 1055
GIVPDIVINPHAFPSRQTPGQLLEAAL KGIAC G S R+ATPFST V
Sbjct: 844 GIVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKKEGSSAAYTKLTRHATPFSTPGV 903
Query: 1056 EAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVH 1115
ITEQLHRAGFSRWGNERVYNGR+GEM+R+LIFMGPTFYQRL+HMSE+KVKFRNTGPVH
Sbjct: 904 TEITEQLHRAGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVH 963
Query: 1116 PLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCRKCKNLANV 1175
PLTRQPVADRKRFGGI+FGEMERDCLIAHGASANLHERLFTLSDSSQMH+CRKCK ANV
Sbjct: 964 PLTRQPVADRKRFGGIRFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANV 1023
Query: 1176 IQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDTQLC 1214
I+RT G+KIRGPYCR C S D VV+V VPYGAKLLCQELFSMGI+L FDT+LC
Sbjct: 1024 IERTPSSGRKIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1055
BLAST of Spo15945.1 vs. TAIR (Arabidopsis)
Match:
AT4G21710.1 (DNA-directed RNA polymerase family protein)
HSP 1 Score: 644.8 bits (1662), Expect = 1.100e-184
Identity = 412/1201 (34.30%), Postives = 638/1201 (53.12%), Query Frame = 1
Query: 66 AAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPG--YDPSKKGEGGWRYASVKF 125
+A+F++ GL+ Q++S++ F+ N +Q + D +I + P ++P + + + F
Sbjct: 31 SAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKISF 90
Query: 126 GKVELEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSD 185
G++ L PM E + L P+ ARL+N+TYSA L V+ T+ +K
Sbjct: 91 GQIYLSKPMM-------TESDGETATLFPKAARLRNLTYSAPLYVDV-----TKRVIK-- 150
Query: 186 KFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSK------VEKGDCEFDHGGYF 245
K E + T + T+V +G+VP+M+ S C + + E G+C +D GGYF
Sbjct: 151 --KGHDGEEVTET---QDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYF 210
Query: 246 IVKGAEKTFIAQEQICLKRLWI--SNEPYWKVAYRSEFKRRR---------VHVKLVENP 305
I+ G+EK IAQE++ +++ +P K AY E + + V+++
Sbjct: 211 IINGSEKVLIAQEKMSTNHVYVFKKRQPN-KYAYVGEVRSMAENQNRPPSTMFVRMLARA 270
Query: 306 KAENIQGGEKV-ISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASI 365
A+ G+ + ++ + E+PI I+F ALG +DK+++E I D ++ +L S+
Sbjct: 271 SAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSL 330
Query: 366 HDADEKCDGFRRGAKAMEYIDQM---IRESKFPPDETTAEYLGKYLFPSLSGNK----QK 425
+A + A++YI + + +K + + L K + P + + +K
Sbjct: 331 EEAFV----IQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKK 390
Query: 426 ARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQR 485
A + Y++ LL GRR D+RD + NKRL+ A LL R+ R + + +Q+
Sbjct: 391 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 450
Query: 486 DLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTIC 545
+ +++ +++ + A +T+GL S +TG W R +GV L R T+
Sbjct: 451 CVDNGKEV-NLQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLS 510
Query: 546 DMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEE 605
+R+ + GK+ R H S WG +C TP+G+ CGLVKN+A ++
Sbjct: 511 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG---SA 570
Query: 606 RVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLP 665
+LE L G + S + + K+ V+G WVGV D +V+ LRR RRR +
Sbjct: 571 AYPILEFLEEWGTENFEEISPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVN 630
Query: 666 CQVEIKRDVQNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFEA-----------L 725
+V + RD++ E+RI+ D GR RPL +V+N +++ + K D Y+ + L
Sbjct: 631 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVDN-QKLLIKKRDIYALQQRESAEEDGWHHL 690
Query: 726 LDKGIIDLIGTEEEEDCRTAWGIRLLYEDKGKG----PVKYSHCELDMSFLLGVSCGIIP 785
+ KG I+ I TEEEE + I L + + + Y+HCE+ S +LGV IIP
Sbjct: 691 VAKGFIEYIDTEEEETTMISMTISDLVQARLRPEEAYTENYTHCEIHPSLILGVCASIIP 750
Query: 786 FANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAE 845
F +H+ + R YQS QA+G TN R+DTL++ +YYPQ+PL + +A
Sbjct: 751 FPDHNQSPRNTYQSAM-GKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT-------RAM 810
Query: 846 HSLGRNQILPNVEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEV 905
L Q LP G N IVA++ + GYNQEDS++MN++S++RG FR+ RSY+ E
Sbjct: 811 EHLHFRQ-LP-----AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDE- 870
Query: 906 DNKESSEKRRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAE----- 965
+ K + + F M + G D LDDDG G + D+IIG+
Sbjct: 871 EKKMGTLVKEDFGRPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDE 930
Query: 966 --------SGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMH 1025
+ DHS+ L+H+E GMV +V+L+ N DG F V +R VR P +GDKFSS H
Sbjct: 931 AQGQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRH 990
Query: 1026 GQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYA 1085
GQKG +G +QE+ P+T +G+ PDI++NPHA PSR T GQL+E +GK A G A
Sbjct: 991 GQKGTVGMTYTQEDMPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDA 1050
Query: 1086 TPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVK 1145
TPF+ ++V+ I++ LH+ G+ G ER+YNG TG + +IF+GPT+YQRL HM +DK+
Sbjct: 1051 TPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIH 1110
Query: 1146 FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCR 1205
R GPV LTRQP R R GG++FGEMERDC+IAHGA+ L ERLF SD+ ++HVC
Sbjct: 1111 SRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE 1170
Query: 1206 KCKNLANVIQRTVPGGKKIRGPYCRFCESVDEVVKVSVPYGAKLLCQELFSMGISLRFDT 1212
C +A K CR C++ ++V+V +PY KLL QEL SM I+ R T
Sbjct: 1171 VCGLIA-------IANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLT 1179
BLAST of Spo15945.1 vs. TAIR (Arabidopsis)
Match:
AT5G45140.1 (nuclear RNA polymerase C2)
HSP 1 Score: 439.9 bits (1130), Expect = 5.100e-123
Identity = 358/1195 (29.96%), Postives = 561/1195 (46.95%), Query Frame = 1
Query: 68 FFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVE 127
F K GL+ ++S+N F+ GI ++ A I+ DPS ++F KV
Sbjct: 39 FLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITST--VDPS---------IYLRFKKVR 98
Query: 128 LEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKT 187
+ P + P RL +MTY+A + V E V
Sbjct: 99 VGEPSIINVNTVE--------NINPHMCRLADMTYAAPIFVNI-------EYVHGSHGNK 158
Query: 188 GKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEK------GDCEFDHGGYFIVKG 247
KS KD VI+GR+P+M+ S C + ++ G+C D GGYFI+KG
Sbjct: 159 AKSA-------KDN---VIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKG 218
Query: 248 AEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVY 307
EK + QEQ+ R+ I ++ + K V + E I + ++
Sbjct: 219 TEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIY-----LFLH 278
Query: 308 FSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHDADEKC--DGFRRGA 367
+ ++PI I+ A+G+ SD+E+V+++ D R S L SI E+C +G
Sbjct: 279 RFVKKIPIIIVLKAMGMESDQEIVQMVG---RDPRFSASLLPSI----EECVSEGVNTQK 338
Query: 368 KAMEYIDQMIRESKF--PPDET-TAEYLGKYLF----PSLSGN-KQKARFLAYMVKCLLQ 427
+A++Y++ +++ + PP++ A + + LF P N +QK ++ M++ +++
Sbjct: 339 QALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIE 398
Query: 428 AFSGRRKCDNRDDFRNKRLECASELL----ERELRVHMRHAEKRMVKAMQRDLYGER-DL 487
A + D++D NKRLE + +L+ E + + A K + + + + R D
Sbjct: 399 AMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDF 458
Query: 488 QSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQ 547
+ ++ GL R+ STG + R R G+ L R + + ++ + K Q
Sbjct: 459 SQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHR-KGMTQVLTRLSFIGSMGFITKISPQ 518
Query: 548 VSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETL 607
+ KV R PS WG +C TP+GE+CGLVKN+A L++ + EE L+
Sbjct: 519 FEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLA---LMTHVTTDEEEGPLVAMC 578
Query: 608 LRCGMDRLVHDSSTSLSGKDKVLV--DGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIK 667
+ G+ L S+ L D LV +G +G S LRR RR ++ V +
Sbjct: 579 YKLGVTDLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVF 638
Query: 668 RDVQNAEVRIFCDAGRILRPLLVVEN-LKRIKL-----LKGDEYSFEALLDKGIIDLIGT 727
+ + V + D GR+ RPL++ + + R+K L+ +F+ + G+I+ +
Sbjct: 639 TNEKQHCVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDV 698
Query: 728 EEEEDCRTAW----GIRLLYEDKGKGPVKYSHCELDMSFLLGVSCGIIPFANHDHARRVL 787
EE + A G L E +H E++ +LGV G+IP+ +H+ + R
Sbjct: 699 NEENNALIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNT 758
Query: 788 YQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPN 847
YQ QA+G + N R+DTL + + YPQRPL + + +G + LG
Sbjct: 759 YQCAMGK-QAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDK--LGA------ 818
Query: 848 VEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKA---EVDNKESSEK 907
GQN VAV GY+ ED++VMN++SL+RG R ++ A + DN +
Sbjct: 819 -----GQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRI 878
Query: 908 RRKFEDTVSFGKMQSKLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGT---------- 967
KMQ LDDDG G ++ DI I + T
Sbjct: 879 LIPQRTGPDAEKMQI-------LDDDGLATPGEIIRPNDIYINKQVPVDTVTKFTSALSD 938
Query: 968 ------DHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGV 1027
K E +V +V L ++ G+ +R R P LGDKFSS HGQKGV
Sbjct: 939 SQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGV 998
Query: 1028 LGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGK-GIACGGSLRYATPFS 1087
G + QE+FPF++ GI PD+++NPH FPSR T G+++E K G++CG Y + F
Sbjct: 999 CGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCG-RFHYGSAFG 1058
Query: 1088 TLS-----VEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKV 1147
S VE I+ L GFS G + +Y+G +GE + IFMGP +YQ+L HM DK+
Sbjct: 1059 ERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKM 1118
Query: 1148 KFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVC 1205
R +GP +TRQP + + GG++ GEMERDCLIA+GAS ++ERL SD ++ VC
Sbjct: 1119 HARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 1152
BLAST of Spo15945.1 vs. TAIR (Arabidopsis)
Match:
AT1G29940.1 (nuclear RNA polymerase A2)
HSP 1 Score: 331.6 bits (849), Expect = 2.000e-90
Identity = 328/1247 (26.30%), Postives = 531/1247 (42.58%), Query Frame = 1
Query: 68 FFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSKKGEGGWRYASVKFGKVE 127
F + H L++H I S++ G+ +F+ I+ +SV YDP+ + E +
Sbjct: 16 FKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSV---YDPNTENELS----------IW 75
Query: 128 LEYPMFWTGEKFHAEGGKDYMKLLPRHARLQNMTYSARLKVETRLQIYTQEKVKSDKFKT 187
LE P+ + +K + LLP R ++Y+ + + Y V DKF
Sbjct: 76 LENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFK-YNDGVVVRDKFD- 135
Query: 188 GKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDCE---------FDHGGYFI 247
G+ P+M+ S +C ++ DC + GGYFI
Sbjct: 136 -------------------FGQFPIMLMSKLC---SLKGADCRKLLKCKESTSEMGGYFI 195
Query: 248 VKGAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRR-------VHVKLVENPKAE-- 307
+ G E+ F I KR N P + R+ F+ R+ V + V + ++
Sbjct: 196 LNGIERVFRCV--IAPKR----NHPTSMI--RNSFRDRKEGYSSKAVVTRCVRDDQSSVT 255
Query: 308 ----NIQGGEKVISVYFSIIE--VPIWILFFALGVSSDKEVVELIDC------STDDGRI 367
++ G + + E +P+ ++ AL S D+E+ E ++C DG I
Sbjct: 256 VKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCCYSEHYGRGDGAI 315
Query: 368 --------SNILFASIHDAD----EKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLG 427
+ I+ + D E+C G +D + +ES E L
Sbjct: 316 GTQLVRERAKIILDEVRDLGLFTREQCRK-HLGQHFQPVLDGVKKESLSIVAEAV---LR 375
Query: 428 KYLFPSLSGNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHM 487
YLF L + K L ++++ L DN D +N+ + ++ L+ +
Sbjct: 376 DYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVPGHVITIYLKEKL 435
Query: 488 RHAEKRMVKAMQRDLYGERDLQSIEHYLDASIVTN---------GLTRSFSTGAW-AHPF 547
++ ++ +L S E D + N + TGA
Sbjct: 436 EEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTSIETLLKTGALKTQSG 495
Query: 548 KRAERVSGVVANLRRTNPLQTICDMRKTRQQVSYTG-KVGDARYPHPSHWGKICFLSTPD 607
++ +G R N L+ + R + S+ G + R P WG +C + TPD
Sbjct: 496 LDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPD 555
Query: 608 GENCGLVKNIAATGLVSSSISKEERV--------SLLETLLRCGM----DRLVHDSSTSL 667
G CGL+ ++ T ++S + + S+++ L GM +LV +
Sbjct: 556 GTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGMVPSLPKLVRAGPPKV 615
Query: 668 SGKDKVLVDGEWVGVCSDSL--KVVEELRRKRRRKR--LPCQVEI---KRDVQNAEVRIF 727
VL+DG+ VG S +L KVV +RR + +P +E+ + + ++
Sbjct: 616 I---HVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDLEVGYVPTSMGGSYPGLY 675
Query: 728 ---CDAGRILRPLLVVENLKRIKLLKGDEYSFEALLDKGIIDLIGTEEEEDCRTAWGIRL 787
C A R +RP V+N+ + I+LIG E+ + +
Sbjct: 676 LASCPA-RFIRP---VKNIS---------------IPSDNIELIGPFEQVF------MEI 735
Query: 788 LYEDKGKGPVKYS----HCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYS 847
D G G S H E+ + ++ V + P+++H+ + R +YQ + + Q + YS
Sbjct: 736 SCPDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQM-AKQTMAYS 795
Query: 848 STNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVAVN 907
+ R D + + PQ P+ R+ +S+ N G N IVAV
Sbjct: 796 TQALQFRADQKIYHLQTPQSPVVRTKTY-----TTYSIDENP--------TGTNAIVAVL 855
Query: 908 VHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQSKL 967
H G++ ED++++N++S+ERGM H + Y+ E N + S++ +F+ + +
Sbjct: 856 AHTGFDMEDAMILNKSSVERGMC---HGQIYQTE--NIDLSDQNSRFDSGSKSFRRSTNK 915
Query: 968 GRVDNLDDDGFPYIGANLQSGDIIIGRCAE-SGTDHSVKLKHTERGMVQKVVLSANDDGK 1027
+D DG P +G L + E + +K K T+ +V V +
Sbjct: 916 AEHFRIDADGLPSVGQKLYPDEPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKH 975
Query: 1028 -NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTK-QGIVPDIVINPHAFPS 1087
A + R R+P +GDKFSS HGQKGV L + PF G+ PD++INPHAFPS
Sbjct: 976 PQRANIRFRHARNPIIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPS 1035
Query: 1088 RQTPGQLLEAALGKGIACGGSLRYATPF--------------STLSVEAITEQLHRAGFS 1147
R T LLE+ KG + G ATPF S+L V+ + L GF+
Sbjct: 1036 RMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFN 1095
Query: 1148 RWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF 1207
+G E +Y+G G ++ IFMGP +YQRL HM DK + R+TG V LT QP+ RKR
Sbjct: 1096 HYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRG 1155
The following BLAST results are available for this feature:
