Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATGACGAGACTGGATGCCAAGCTGCTCCCGAAGGTCCAATCTTGTGCATCAATAACTGTGGATTCTTCGGGAGTGTTGCCACAATGAACATGTGCTCGAAATGCTACAAAGATGCGGTTCTCAAACAAGAGCAAGCTAAACTCGCCGCATCATCAATTGAAAACATAGTGAACGGTAACGGTGGTTCATCATCATCAAGCTGCAACAACAACAACAACAACAAGGAACCAATTGTTGTTGAAACATCAGTGGATTTACAGCAACAGCAAGTCAAACCAATAGAACTGAAAGTTATATCAAGCCCAAACAAGGCCCAAGTCGTTGCACCACCCGAGTCGGTGGTGGAGGAGAGTGGAGATAACACCACCAAGCCCAAACAAGGCCCGAGTCGTTGCACCAGTTGCAAGAAACGGGTAGGGTTGACGGGTTTCAATTGCCGGTGCGGTAACCTTTTCTGTGCCACACATCGGTACTCGGACAAACACGAGTGCCCCTTTGACTACCGCACCGCAGCTCGTGATGCCATAGCGAAAGCTAACCCGGTTATCAAGGCTGAAAAACTCGATAAAATCTAA ATGGATCATGACGAGACTGGATGCCAAGCTGCTCCCGAAGGTCCAATCTTGTGCATCAATAACTGTGGATTCTTCGGGAGTGTTGCCACAATGAACATGTGCTCGAAATGCTACAAAGATGCGGTTCTCAAACAAGAGCAAGCTAAACTCGCCGCATCATCAATTGAAAACATAGTGAACGGTAACGGTGGTTCATCATCATCAAGCTGCAACAACAACAACAACAACAAGGAACCAATTGTTGTTGAAACATCAGTGGATTTACAGCAACAGCAAGTCAAACCAATAGAACTGAAAGTTATATCAAGCCCAAACAAGGCCCAAGTCGTTGCACCACCCGAGTCGGTGGTGGAGGAGAGTGGAGATAACACCACCAAGCCCAAACAAGGCCCGAGTCGTTGCACCAGTTGCAAGAAACGGGTAGGGTTGACGGGTTTCAATTGCCGGTGCGGTAACCTTTTCTGTGCCACACATCGGTACTCGGACAAACACGAGTGCCCCTTTGACTACCGCACCGCAGCTCGTGATGCCATAGCGAAAGCTAACCCGGTTATCAAGGCTGAAAAACTCGATAAAATCTAA ATGGATCATGACGAGACTGGATGCCAAGCTGCTCCCGAAGGTCCAATCTTGTGCATCAATAACTGTGGATTCTTCGGGAGTGTTGCCACAATGAACATGTGCTCGAAATGCTACAAAGATGCGGTTCTCAAACAAGAGCAAGCTAAACTCGCCGCATCATCAATTGAAAACATAGTGAACGGTAACGGTGGTTCATCATCATCAAGCTGCAACAACAACAACAACAACAAGGAACCAATTGTTGTTGAAACATCAGTGGATTTACAGCAACAGCAAGTCAAACCAATAGAACTGAAAGTTATATCAAGCCCAAACAAGGCCCAAGTCGTTGCACCACCCGAGTCGGTGGTGGAGGAGAGTGGAGATAACACCACCAAGCCCAAACAAGGCCCGAGTCGTTGCACCAGTTGCAAGAAACGGGTAGGGTTGACGGGTTTCAATTGCCGGTGCGGTAACCTTTTCTGTGCCACACATCGGTACTCGGACAAACACGAGTGCCCCTTTGACTACCGCACCGCAGCTCGTGATGCCATAGCGAAAGCTAACCCGGTTATCAAGGCTGAAAAACTCGATAAAATCTAA MDHDETGCQAAPEGPILCINNCGFFGSVATMNMCSKCYKDAVLKQEQAKLAASSIENIVNGNGGSSSSSCNNNNNNKEPIVVETSVDLQQQQVKPIELKVISSPNKAQVVAPPESVVEESGDNTTKPKQGPSRCTSCKKRVGLTGFNCRCGNLFCATHRYSDKHECPFDYRTAARDAIAKANPVIKAEKLDKI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15640.1 vs. NCBI nr
Match: gi|902155877|gb|KNA05961.1| (hypothetical protein SOVF_185500 [Spinacia oleracea]) HSP 1 Score: 388.7 bits (997), Expect = 6.100e-105 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of Spo15640.1 vs. NCBI nr
Match: gi|731325608|ref|XP_010673602.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 277.7 bits (709), Expect = 1.500e-71 Identity = 143/193 (74.09%), Postives = 157/193 (81.35%), Query Frame = 1
BLAST of Spo15640.1 vs. NCBI nr
Match: gi|225435496|ref|XP_002285530.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Vitis vinifera]) HSP 1 Score: 250.8 bits (639), Expect = 2.000e-63 Identity = 129/193 (66.84%), Postives = 148/193 (76.68%), Query Frame = 1
BLAST of Spo15640.1 vs. NCBI nr
Match: gi|743816971|ref|XP_011020304.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform X1 [Populus euphratica]) HSP 1 Score: 246.5 bits (628), Expect = 3.800e-62 Identity = 127/191 (66.49%), Postives = 148/191 (77.49%), Query Frame = 1
BLAST of Spo15640.1 vs. NCBI nr
Match: gi|1012219787|ref|XP_015935441.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Arachis duranensis]) HSP 1 Score: 246.5 bits (628), Expect = 3.800e-62 Identity = 132/193 (68.39%), Postives = 149/193 (77.20%), Query Frame = 1
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QH80_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185500 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 4.300e-105 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FF42_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g072320 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.100e-71 Identity = 143/193 (74.09%), Postives = 157/193 (81.35%), Query Frame = 1
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Match: F6GU85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01820 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.400e-63 Identity = 129/193 (66.84%), Postives = 148/193 (76.68%), Query Frame = 1
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Match: V7AEI2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G058100g PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.400e-62 Identity = 132/193 (68.39%), Postives = 141/193 (73.06%), Query Frame = 1
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Match: A0A0L9V6V7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g161300 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 7.600e-62 Identity = 131/193 (67.88%), Postives = 140/193 (72.54%), Query Frame = 1
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 4.300e-58 Identity = 118/194 (60.82%), Postives = 144/194 (74.23%), Query Frame = 1
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2) HSP 1 Score: 225.7 bits (574), Expect = 4.300e-58 Identity = 118/194 (60.82%), Postives = 144/194 (74.23%), Query Frame = 1
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55 Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 1
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2) HSP 1 Score: 200.3 bits (508), Expect = 1.900e-50 Identity = 111/193 (57.51%), Postives = 134/193 (69.43%), Query Frame = 1
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 1.800e-32 Identity = 85/193 (44.04%), Postives = 112/193 (58.03%), Query Frame = 1
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 200.3 bits (508), Expect = 1.100e-51 Identity = 111/193 (57.51%), Postives = 134/193 (69.43%), Query Frame = 1
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 140.6 bits (353), Expect = 1.000e-33 Identity = 85/193 (44.04%), Postives = 112/193 (58.03%), Query Frame = 1
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Match: AT1G12440.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 136.7 bits (343), Expect = 1.500e-32 Identity = 73/183 (39.89%), Postives = 101/183 (55.19%), Query Frame = 1
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Match: AT2G27580.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 136.0 bits (341), Expect = 2.500e-32 Identity = 71/180 (39.44%), Postives = 106/180 (58.89%), Query Frame = 1
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Match: AT4G12040.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 129.4 bits (324), Expect = 2.400e-30 Identity = 70/185 (37.84%), Postives = 106/185 (57.30%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15640.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15640.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15640.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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