Spo15479 (gene)

Overview
NameSpo15479
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 35218537 .. 35221592 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCAAGGCCACGCTTTTGCTTGGCCTCATCTGCATTACTCTCGCCGTTGCCGGCGGACAATCCCCCGCCTCATCCCCCACTCAATCTCCTCCCACCACCACCCAGCCACCTCCAGCAAACCAACCTCCACCAGCTACTCAACCTCCTCAAGCAAGCCAACCTCCACCAGCTACTCAACCACCTCAAGCAAGCCAACCTCCACCAGCAACTCAACCACCTCAAGCAAGCCAGCCTCCTCAAGCTAGCCAACCTCCACCAGCTACTCAACCACCTACCGCTTCTCCCCCTACCCAAACCACCACTCCACCTCCTACCACCACCGCCTCACCACCACCAGTAGCACAAGCACCCCAACAACAATCTCCACCACCAGTGGCTGCAACTCCACCTCCAGTAGCTGCAACTCCACCACCTGTTTCCTCCCCACCACCAGTGGCAACTCCACCACCAGTTGCAACCCCACCACCAGTCTCCGCTCCACCACCAGCAACAACCACTCCACCCGCTGCTGCCCCAGTTGCTACACCAGTGGCTACACCGGCTGTTTCCCCCGTCGCAGCGGCACCATCTCCATTGTTGTCTTCCCCACCATCTCCCCCCGCTGAAGCTCCTGGACCTGGTATGGGTGGTGCTCTCTCTCCTGGGCCCACCAGCTCCGATTCTGATCAGGTATACATTTTTAAATCTTTATTGTTTTTAATTTAATTGTTGCATTGTTCAGATCTAAGTAGGTGTCAAGTGTTAAATTAGATCTGATCGATGTACTATGTCGATCTTCGTGTTGTTGTGTTTAGCGTGCTGCATTGTTGTCGGGTATCTTTAGTCAAACATCAGTGATAATAGTAGCACTAGTTTAGTCTAGTAGAAGTACTCAATTCTCTCTCTGTCTTCATTACATTGGTCTACGGTGCAGTTAGTACTCTGTATTGCATTGACTGATTCACATGGTCGTGGAAGATAATCTACTCCAAAGTAATTTGTTGTTAACAAAATGTCGTATGAGGCTGTTTTACAATAAATTATCGTGAGATCGTAGCTTTTAATATCACACGGTAAATTACCCGAGATTTTGTTGTTTATGTTTCCTGCTATGGGCAATGAATGAGACAATGTGATATGCTCGTATTCATGATGACATGAATTATTCAATCATCTTTTGGGATGTTTTAATTTGTGTTAGATATCAGAGAATTAGGTTAGGAGGTCTTGTATTGTATACTTAGGATCCATTCGACATTTTTGCGCTTAGCCGTTGAACATATGTTTATCTGAAGTTTTGCATTTGTTATTTGTAAAATCTTGTTACACTAATTAGTGCACTGCACTAAGCATGTTGTTACTGTAAAACAAAGTATGAAAGTATCTTGTCTTGGATAGTAAAATGGGTGGACTAAATGAACGATGATTCTGGCTAAGTGGCTAAGTGGCTAAGCATCCTTAAATGTATTTACATTATCACTGGTGTTACCGTGTCAAGGGTTTCGAGTTGTGGCCTGTAATTCGGAGTAGTATGGATATAAATTGTACGAAAAAATAGATGTTCCTTTAGGTACGAAAATTCTTACAAGTTGCTAATTACAGATATAAAAAATACGTATTGTTACTGCTATAATTAGCAACATGTATAACAACTACAGTACACAACAAAAACTTGAATCATCATGTGAAACATGGTAAAGCCTATATTACGCTAAATATACTCCCATCCAGCTGTTTGCTGCCACCTTGAGGATCCCTAGATTGGAAGAACTTTGCTTAGCTTTAAAGAGAACCACGGGTGGGACCTTTTACTATATTAATTTCGGATGATTGGTGTGATGAATTAACCATGTGGTATTGGCATGATGTAGCTGGTACAACATCATCTTATGCTTCTTTTTATTGCCTAATATATGCTTGTTTTCTNAACAAAAACTTGAATCATCATGTGAAACATGGTAAAGCCTATATTATCGCTAAATATACTCCCATCCAGCTGTTTGCTGCCACCTTGAGGATCCCTAGATTGGAAGAACTTTGCTTAGCTTTAAAGAGAACCACGGGTGGGACCTTTTACTATATTACTTTCGGATGATTGGTGTGATGAATTAACCATGTGGTATTGGCATGATCAATGATGTAGCTGGTACAACATCATCTTATGCTTCTTTTTATTGCCTAATATATGCTTGTTTTCTNATGATGTAGCTGGTACAACATCATCTTATGCTTCTTTTTATTGCCTAATATATGCTTGTTTTCTTTTGTTATGAGGATTGAGGACCTATCATGAAAGAGACTTTGGTAGTTAATGTTTTCACTTCATCGTTTTTTTCGAATTAAACCGTTTTAGTGATTGCTAGTCCTATTGGATCAAAATTGATTCATTAGACAGTATTAGTATCAATCTATCACTCAAATTGTTGGTTGGTTAAATGATCTTGGCGGGTCCATTCCTTCTATACACTGTGAGCTGACTTTGGATTCTACTTTTTGTATTTCTTCATTGCGTCTAAATCATATTCATGAACATTATGAAACATGATTAGATATGATCTCAATTTAAAATGACTCATTCAAGAAAACAGGGGAATTGCCTTTACTTTCAAGGCTTAAACTTAAGAATCCTAAGTAGCACTACCACTAGCACTTACCCTTTACCGCTTCTGAAGCAAATGTTGTGATTCTTGTGATCACCTTTAGCTGTTGCTAATGTTGAGGAATTGAGGTCATGTATTGAAGTATAATATTCAATGCTAACAAGATACAACTCGTGATCCTTGAACAAACATGCTAGTTTTGGTTGGTTGTTACCTGCTAGAAGAGATTGGCCCACAATCTAGTGATCATATGCAGAAAAGTCAGCTGTTTCTGGATTCATTCATAAATTGACATCACATTTCATGCAAGTTTGCCATTATTACATAAACTAGAGCTGTTACCTGTTACTGATATATATATATATATATATAAATTTTGAAATGCAGAGTGGAGTAGAGAAGATGTGGTCTGTTTCCAAGTTGATTGGAAGCTTGATTTCTGGATGTGCAATCCTTGCCTTGCTATTTTAA

mRNA sequence

ATGGATCTCAAGGCCACGCTTTTGCTTGGCCTCATCTGCATTACTCTCGCCGTTGCCGGCGGACAATCCCCCGCCTCATCCCCCACTCAATCTCCTCCCACCACCACCCAGCCACCTCCAGCAAACCAACCTCCACCAGCTACTCAACCTCCTCAAGCAAGCCAACCTCCACCAGCTACTCAACCACCTCAAGCAAGCCAACCTCCACCAGCAACTCAACCACCTCAAGCAAGCCAGCCTCCTCAAGCTAGCCAACCTCCACCAGCTACTCAACCACCTACCGCTTCTCCCCCTACCCAAACCACCACTCCACCTCCTACCACCACCGCCTCACCACCACCAGTAGCACAAGCACCCCAACAACAATCTCCACCACCAGTGGCTGCAACTCCACCTCCAGTAGCTGCAACTCCACCACCTGTTTCCTCCCCACCACCAGTGGCAACTCCACCACCAGTTGCAACCCCACCACCAGTCTCCGCTCCACCACCAGCAACAACCACTCCACCCGCTGCTGCCCCAGTTGCTACACCAGTGGCTACACCGGCTGTTTCCCCCGTCGCAGCGGCACCATCTCCATTGTTGTCTTCCCCACCATCTCCCCCCGCTGAAGCTCCTGGACCTGGTATGGGTGGTGCTCTCTCTCCTGGGCCCACCAGCTCCGATTCTGATCAGAGTGGAGTAGAGAAGATGTGGTCTGTTTCCAAGTTGATTGGAAGCTTGATTTCTGGATGTGCAATCCTTGCCTTGCTATTTTAA

Coding sequence (CDS)

ATGGATCTCAAGGCCACGCTTTTGCTTGGCCTCATCTGCATTACTCTCGCCGTTGCCGGCGGACAATCCCCCGCCTCATCCCCCACTCAATCTCCTCCCACCACCACCCAGCCACCTCCAGCAAACCAACCTCCACCAGCTACTCAACCTCCTCAAGCAAGCCAACCTCCACCAGCTACTCAACCACCTCAAGCAAGCCAACCTCCACCAGCAACTCAACCACCTCAAGCAAGCCAGCCTCCTCAAGCTAGCCAACCTCCACCAGCTACTCAACCACCTACCGCTTCTCCCCCTACCCAAACCACCACTCCACCTCCTACCACCACCGCCTCACCACCACCAGTAGCACAAGCACCCCAACAACAATCTCCACCACCAGTGGCTGCAACTCCACCTCCAGTAGCTGCAACTCCACCACCTGTTTCCTCCCCACCACCAGTGGCAACTCCACCACCAGTTGCAACCCCACCACCAGTCTCCGCTCCACCACCAGCAACAACCACTCCACCCGCTGCTGCCCCAGTTGCTACACCAGTGGCTACACCGGCTGTTTCCCCCGTCGCAGCGGCACCATCTCCATTGTTGTCTTCCCCACCATCTCCCCCCGCTGAAGCTCCTGGACCTGGTATGGGTGGTGCTCTCTCTCCTGGGCCCACCAGCTCCGATTCTGATCAGAGTGGAGTAGAGAAGATGTGGTCTGTTTCCAAGTTGATTGGAAGCTTGATTTCTGGATGTGCAATCCTTGCCTTGCTATTTTAA

Protein sequence

MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPATQPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVATPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGSLISGCAILALLF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15479.1Spo15479.1mRNA


Homology
[Close]
BLAST of Spo15479.1 vs. NCBI nr
Match: gi|902181827|gb|KNA09808.1| (hypothetical protein SOVF_150200 [Spinacia oleracea])

HSP 1 Score: 396.7 bits (1018), Expect = 2.900e-107
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60
           MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT
Sbjct: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60

Query: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120
           QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ
Sbjct: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120

Query: 121 QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA 180
           QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA
Sbjct: 121 QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA 180

Query: 181 TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS 240
           TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS
Sbjct: 181 TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS 240

Query: 241 LISGCAILALLF 253
           LISGCAILALLF
Sbjct: 241 LISGCAILALLF 252
[Close]
BLAST of Spo15479.1 vs. NCBI nr
Match: gi|731352363|ref|XP_010687508.1| (PREDICTED: classical arabinogalactan protein 9-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 257.7 bits (657), Expect = 2.100e-65
Identity = 199/258 (77.13%), Postives = 217/258 (84.11%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60
           MDLKATLLLGLICITL+V GGQSPA+SP+QS    TQPPP  QPPPATQPPQASQPPPAT
Sbjct: 1   MDLKATLLLGLICITLSVVGGQSPAASPSQS----TQPPPTTQPPPATQPPQASQPPPAT 60

Query: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120
           QPPQASQPPPA QPPQA+QPPQASQPPPATQPPTASPPTQTTT P      PP VAQAP 
Sbjct: 61  QPPQASQPPPAAQPPQATQPPQASQPPPATQPPTASPPTQTTTAP------PPQVAQAP- 120

Query: 121 QQSPPPVAATPPPVAATPPPV--SSPPPVATPPPVATPPPVSAPPPATTTPPAA--APVA 180
           QQSPPPV ATPPPVAATPPPV  S PPPVATPPP ATPPPVSAPPP +T PPAA  AP++
Sbjct: 121 QQSPPPV-ATPPPVAATPPPVVSSPPPPVATPPP-ATPPPVSAPPPVSTPPPAATPAPLS 180

Query: 181 TPVATPAVSPVAAAPSP-LLSSPPSPPAEAPGPGMGGALSPGPTSSDS-DQSGVEKMWSV 240
           TP   PAV+PVAA P P L +SPP P +EAPGP + GA SPGP ++ + D+SGVE+MWS+
Sbjct: 181 TP---PAVAPVAATPGPSLAASPPVPLSEAPGPSLLGAASPGPANAQADDESGVERMWSM 240

Query: 241 SKLIGSLISGCAILALLF 253
           SKLIGSLISGCA+LALLF
Sbjct: 241 SKLIGSLISGCALLALLF 242
[Close]
BLAST of Spo15479.1 vs. NCBI nr
Match: gi|565359043|ref|XP_006346332.1| (PREDICTED: classical arabinogalactan protein 9 [Solanum tuberosum])

HSP 1 Score: 114.0 bits (284), Expect = 3.800e-22
Identity = 139/260 (53.46%), Postives = 165/260 (63.46%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQS--PPTTTQPPPANQPPPA-TQPPQASQPP 60
           MD K  L +G +CI +A  GGQ+PA+SPT S  PPT+T P P   PPPA + PP +   P
Sbjct: 1   MDRKNALWIGFLCIIVAGVGGQAPATSPTTSPAPPTSTTPAPTGSPPPAVSSPPPSVSSP 60

Query: 61  PATQP-PQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTT---ASPP 120
           PAT P P AS PPP + PP A+ PP  S PPPAT PP ++PP    TPPP +    A+PP
Sbjct: 61  PATSPLPAASPPPPVSAPPPAT-PPPVSAPPPATPPPVSAPP--PATPPPVSAPPPATPP 120

Query: 121 PVAQAPQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAA 180
           PV+ AP   +PPPV+A PP   ATPPPVS+PPP ATPPPV+TPPP +A P    TPPA+A
Sbjct: 121 PVS-APPPATPPPVSAPPP---ATPPPVSAPPP-ATPPPVSTPPPPAAAPAPVATPPASA 180

Query: 181 PVATPVATPAVSPVAAAPSPL-LSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMW 240
           P  TP    A SP   APSP+ L SPP+PP  AP P     LSP P  S  DQSGVE   
Sbjct: 181 PAPTPTTKVATSP---APSPVGLLSPPAPPLGAPSP---SGLSPAP--SAPDQSGVEGNM 240

Query: 241 SVSKLI-GSLISGCAILALL 252
             S +I GSL+ G  +L LL
Sbjct: 241 RFSNMIMGSLVFGWGLLYLL 244
[Close]
BLAST of Spo15479.1 vs. NCBI nr
Match: gi|731383936|ref|XP_002272036.3| (PREDICTED: classical arabinogalactan protein 9 [Vitis vinifera])

HSP 1 Score: 110.9 bits (276), Expect = 3.200e-21
Identity = 130/247 (52.63%), Postives = 156/247 (63.16%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60
           MD K+ L+LGL+CI  A  GGQ+PA  PT +P   T   PA  PP A   P AS PPP +
Sbjct: 69  MDCKSLLVLGLVCIVFAGVGGQAPAGGPTATPAPPTPTTPAASPPTAVTSPPASSPPPVS 128

Query: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120
            PP A+ PPPAT PP A+ PP  + PPPAT PP   PP    TPPP   A+PPP      
Sbjct: 129 APPPAT-PPPAT-PPPATPPP--ATPPPATPPPATPPP---ATPPP---ATPPPA----- 188

Query: 121 QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA 180
             +PPP  ATPPP  ATPPP + PP  ATPPP ATPPP + PP    +PPAA P   P +
Sbjct: 189 --TPPP--ATPPP--ATPPPATPPP--ATPPP-ATPPPATPPPAPLASPPAAVPAPAP-S 248

Query: 181 TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS 240
           T   SP A APSPL +SPP+PPAEAPGP + G +SP P +  +D +GVEK+WS+ K+ GS
Sbjct: 249 TKVKSP-ALAPSPLTNSPPAPPAEAPGP-ISGGISPAPAA--NDVNGVEKLWSMKKVAGS 286

Query: 241 LISGCAI 248
           L  G A+
Sbjct: 309 LAFGLAL 286
[Close]
BLAST of Spo15479.1 vs. NCBI nr
Match: gi|1009125493|ref|XP_015879640.1| (PREDICTED: classical arabinogalactan protein 9 [Ziziphus jujuba])

HSP 1 Score: 109.4 bits (272), Expect = 9.400e-21
Identity = 136/261 (52.11%), Postives = 154/261 (59.00%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPP----PANQPPPATQPPQ--AS 60
           M+ KA  L+G ICI +A  GGQSPA+SP+QSPP T  PP    P   PP   QPP   A+
Sbjct: 1   MNRKAIFLIGFICIVVAGVGGQSPANSPSQSPPATQAPPTPTTPTASPPANNQPPPTPAA 60

Query: 61  QPPPATQPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPP 120
            PP ++ PP  S PPP TQ P  S PP  S PPPAT PP +SPP    +PPP T   PPP
Sbjct: 61  TPPASSPPPTTSSPPPVTQSPPPSTPPPVSAPPPATPPPVSSPPP--ASPPPAT---PPP 120

Query: 121 VAQAPQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAP 180
                   +PPP  ATPPP  A+PPP S PP  ATPPP ATPPP + PP    +PPA  P
Sbjct: 121 A-------TPPP--ATPPP--ASPPPASPPP--ATPPP-ATPPPATPPPAPLASPPATVP 180

Query: 181 VATPVATPAVSPVAAAPSPL----LSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEK 240
              P    A SP   APSPL     SSPP+PP EAPGP +   LSPGP+    D SGVEK
Sbjct: 181 APAPSKKKAKSP---APSPLGLSPGSSPPAPPTEAPGPSL-NTLSPGPS---QDVSGVEK 231

Query: 241 MWSVSKLIGSLISGCAILALL 252
           MWS    IGSL  GC  L L+
Sbjct: 241 MWS----IGSLSIGCVFLWLM 231
[Close]
BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSY9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150200 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.000e-107
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60
           MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT
Sbjct: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60

Query: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120
           QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ
Sbjct: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120

Query: 121 QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA 180
           QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA
Sbjct: 121 QQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATPVA 180

Query: 181 TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS 240
           TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS
Sbjct: 181 TPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLIGS 240

Query: 241 LISGCAILALLF 253
           LISGCAILALLF
Sbjct: 241 LISGCAILALLF 252
[Close]
BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EL01_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190490 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.500e-65
Identity = 199/258 (77.13%), Postives = 217/258 (84.11%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSPPTTTQPPPANQPPPATQPPQASQPPPAT 60
           MDLKATLLLGLICITL+V GGQSPA+SP+QS    TQPPP  QPPPATQPPQASQPPPAT
Sbjct: 1   MDLKATLLLGLICITLSVVGGQSPAASPSQS----TQPPPTTQPPPATQPPQASQPPPAT 60

Query: 61  QPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQAPQ 120
           QPPQASQPPPA QPPQA+QPPQASQPPPATQPPTASPPTQTTT P      PP VAQAP 
Sbjct: 61  QPPQASQPPPAAQPPQATQPPQASQPPPATQPPTASPPTQTTTAP------PPQVAQAP- 120

Query: 121 QQSPPPVAATPPPVAATPPPV--SSPPPVATPPPVATPPPVSAPPPATTTPPAA--APVA 180
           QQSPPPV ATPPPVAATPPPV  S PPPVATPPP ATPPPVSAPPP +T PPAA  AP++
Sbjct: 121 QQSPPPV-ATPPPVAATPPPVVSSPPPPVATPPP-ATPPPVSAPPPVSTPPPAATPAPLS 180

Query: 181 TPVATPAVSPVAAAPSP-LLSSPPSPPAEAPGPGMGGALSPGPTSSDS-DQSGVEKMWSV 240
           TP   PAV+PVAA P P L +SPP P +EAPGP + GA SPGP ++ + D+SGVE+MWS+
Sbjct: 181 TP---PAVAPVAATPGPSLAASPPVPLSEAPGPSLLGAASPGPANAQADDESGVERMWSM 240

Query: 241 SKLIGSLISGCAILALLF 253
           SKLIGSLISGCA+LALLF
Sbjct: 241 SKLIGSLISGCALLALLF 242
[Close]
BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Match: M1CF53_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025757 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.700e-22
Identity = 139/260 (53.46%), Postives = 165/260 (63.46%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQS--PPTTTQPPPANQPPPA-TQPPQASQPP 60
           MD K  L +G +CI +A  GGQ+PA+SPT S  PPT+T P P   PPPA + PP +   P
Sbjct: 1   MDRKNALWIGFLCIIVAGVGGQAPATSPTTSPAPPTSTTPAPTGSPPPAVSSPPPSVSSP 60

Query: 61  PATQP-PQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTT---ASPP 120
           PAT P P AS PPP + PP A+ PP  S PPPAT PP ++PP    TPPP +    A+PP
Sbjct: 61  PATSPLPAASPPPPVSAPPPAT-PPPVSAPPPATPPPVSAPP--PATPPPVSAPPPATPP 120

Query: 121 PVAQAPQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAA 180
           PV+ AP   +PPPV+A PP   ATPPPVS+PPP ATPPPV+TPPP +A P    TPPA+A
Sbjct: 121 PVS-APPPATPPPVSAPPP---ATPPPVSAPPP-ATPPPVSTPPPPAAAPAPVATPPASA 180

Query: 181 PVATPVATPAVSPVAAAPSPL-LSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMW 240
           P  TP    A SP   APSP+ L SPP+PP  AP P     LSP P  S  DQSGVE   
Sbjct: 181 PAPTPTTKVATSP---APSPVGLLSPPAPPLGAPSP---SGLSPAP--SAPDQSGVEGNM 240

Query: 241 SVSKLI-GSLISGCAILALL 252
             S +I GSL+ G  +L LL
Sbjct: 241 RFSNMIMGSLVFGWGLLYLL 244
[Close]
BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Match: A0A103XMC5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004614 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.100e-20
Identity = 121/246 (49.19%), Postives = 141/246 (57.32%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSP--PTTTQPPPANQPPPATQPPQASQPPP 60
           MD KA  L  LICI  A A  QSP+SSPT +P  PTTT PPP+  PPP T PP AS PPP
Sbjct: 1   MDRKAVFLTALICIVFASAAAQSPSSSPTATPAPPTTTTPPPST-PPPVTAPPPASTPPP 60

Query: 61  ATQPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQA 120
                  S PPP   PP  S PP  + PPPAT PP ASPP                    
Sbjct: 61  V------SSPPPVATPPPVSSPPPVASPPPATPPPVASPP-------------------- 120

Query: 121 PQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATP 180
                     ATPPPVA+  PP ++PPPVA+PPP ATPPPV++PPPA          A P
Sbjct: 121 ---------PATPPPVAS--PPAATPPPVASPPP-ATPPPVASPPPA----------AVP 180

Query: 181 VATPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLI 240
           V++PA++P +AAPSPL  SPP+PP  AP P +   +SP P  S +D SGVEKM SV   +
Sbjct: 181 VSSPAMTP-SAAPSPLTLSPPAPPTGAPSPALTTDVSPAP--SATDVSGVEKMESV---V 191

Query: 241 GSLISG 245
           GSL  G
Sbjct: 241 GSLFFG 191
[Close]
BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Match: A0A103Y3S2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_019788 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.000e-19
Identity = 120/254 (47.24%), Postives = 141/254 (55.51%), Query Frame = 1 

		  

Query: 1   MDLKATLLLGLICITLAVAGGQSPASSPTQSP--PTTTQPPPANQPPPATQPPQASQPPP 60
           MD  A  L   ICI  +  GGQSP+SSPT +P  PTTT PPP   PP  T          
Sbjct: 1   MDRNAIFLTAFICIVFSCVGGQSPSSSPTATPAPPTTTTPPPTASPPQVT---------- 60

Query: 61  ATQPPQASQPPPATQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQA 120
                  S PPP + PP  + PP  S PPPAT PP ASPP           A+PPPVA  
Sbjct: 61  -------STPPPVSSPPPVATPPPVSSPPPATPPPVASPPP----------ATPPPVA-- 120

Query: 121 PQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATP 180
               SPPP         ATPPPV+SPPP ATPPPVA+PPP  AP     +PPA+ PV++P
Sbjct: 121 ----SPPP---------ATPPPVASPPP-ATPPPVASPPP--AP---LASPPASVPVSSP 180

Query: 181 VATPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSDSDQSGVEKMWSVSKLI 240
             TP      AAPSPL  SPP+PP  AP P +   LSP P  S +D SGVEKM S   ++
Sbjct: 181 TVTPT-----AAPSPLTLSPPAPPTGAPSPSLATDLSPAP--SATDVSGVEKMGS---MV 196

Query: 241 GSLISGCAILALLF 253
           GS++ G A++  LF
Sbjct: 241 GSMVFGLALVYSLF 196
[Close]
BLAST of Spo15479.1 vs. ExPASy Swiss-Prot
Match: AGP9_ARATH (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana GN=AGP9 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 5.700e-10
Identity = 91/185 (49.19%), Postives = 111/185 (60.00%), Query Frame = 1 

		  

Query: 60  TQPPQASQPPPA-TQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQA 119
           T PP A+  PP  T PP A+ PP  S PPP T     SPP  TT PPP   A+PPP   +
Sbjct: 24  TSPPTATPAPPTPTTPPPAATPPPVSAPPPVT----TSPPPVTTAPPP---ANPPPPVSS 83

Query: 120 PQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATP 179
           P   SPPP  ATPPPVA+ PPPV+SPPP ATPPPVATPPP          P A+ P   P
Sbjct: 84  PPPASPPP--ATPPPVASPPPPVASPPP-ATPPPVATPPP---------APLASPPAQVP 143

Query: 180 VATPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSD-SDQSGVEKMWSVSKL 239
              P   P + +PSP  SSPP P ++APGP    ++SP P+ +D +DQ+G  KM S S +
Sbjct: 144 APAPTTKPDSPSPSP-SSSPPLPSSDAPGPST-DSISPAPSPTDVNDQNGASKMVS-SLV 186

Query: 240 IGSLI 243
            GS++
Sbjct: 204 FGSVL 186
[Close]
BLAST of Spo15479.1 vs. TAIR (Arabidopsis)
Match: AT2G14890.1 (arabinogalactan protein 9)

HSP 1 Score: 66.2 bits (160), Expect = 3.200e-11
Identity = 91/185 (49.19%), Postives = 111/185 (60.00%), Query Frame = 1 

		  

Query: 60  TQPPQASQPPPA-TQPPQASQPPQASQPPPATQPPTASPPTQTTTPPPTTTASPPPVAQA 119
           T PP A+  PP  T PP A+ PP  S PPP T     SPP  TT PPP   A+PPP   +
Sbjct: 24  TSPPTATPAPPTPTTPPPAATPPPVSAPPPVT----TSPPPVTTAPPP---ANPPPPVSS 83

Query: 120 PQQQSPPPVAATPPPVAATPPPVSSPPPVATPPPVATPPPVSAPPPATTTPPAAAPVATP 179
           P   SPPP  ATPPPVA+ PPPV+SPPP ATPPPVATPPP          P A+ P   P
Sbjct: 84  PPPASPPP--ATPPPVASPPPPVASPPP-ATPPPVATPPP---------APLASPPAQVP 143

Query: 180 VATPAVSPVAAAPSPLLSSPPSPPAEAPGPGMGGALSPGPTSSD-SDQSGVEKMWSVSKL 239
              P   P + +PSP  SSPP P ++APGP    ++SP P+ +D +DQ+G  KM S S +
Sbjct: 144 APAPTTKPDSPSPSP-SSSPPLPSSDAPGPST-DSISPAPSPTDVNDQNGASKMVS-SLV 186

Query: 240 IGSLI 243
            GS++
Sbjct: 204 FGSVL 186
The following BLAST results are available for this feature:
BLAST of Spo15479.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902181827|gb|KNA09808.1|2.9e-107100.hypothetical protein SOVF_1502... [more]
gi|731352363|ref|XP_010687508.1|2.1e-6577.1PREDICTED: classical arabinoga... [more]
gi|565359043|ref|XP_006346332.1|3.8e-2253.4PREDICTED: classical arabinoga... [more]
gi|731383936|ref|XP_002272036.3|3.2e-2152.6PREDICTED: classical arabinoga... [more]
gi|1009125493|ref|XP_015879640.1|9.4e-2152.1PREDICTED: classical arabinoga... [more]
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BLAST of Spo15479.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSY9_SPIOL2.0e-107100.Uncharacterized protein OS=Spi... [more]
A0A0J8EL01_BETVU1.5e-6577.1Uncharacterized protein OS=Bet... [more]
M1CF53_SOLTU2.7e-2253.4Uncharacterized protein OS=Sol... [more]
A0A103XMC5_CYNCS1.1e-2049.1Uncharacterized protein OS=Cyn... [more]
A0A103Y3S2_CYNCS8.0e-1947.2Uncharacterized protein OS=Cyn... [more]
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BLAST of Spo15479.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGP9_ARATH5.7e-1049.1Classical arabinogalactan prot... [more]
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BLAST of Spo15479.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G14890.13.2e-1149.1arabinogalactan protein 9[more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
biological_process GO:0016573 histone acetylation
biological_process GO:0006508 proteolysis
biological_process GO:0080119 ER body organization
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0006310 DNA recombination
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0071555 cell wall organization
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0015772 oligosaccharide transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008284 positive regulation of cell proliferation
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009507 chloroplast
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0005618 cell wall
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0015157 oligosaccharide transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005199 structural constituent of cell wall
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression