Spo15340 (gene)

Overview
NameSpo15340
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 13315696 .. 13315899 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCCATGTGCCGTTTTGCACAATGCTCCGTGTAGTATCAGGACTCGGACTCACCGCATAATTGATCTTCTTCCGCTATCACCGCCGGCGACCACCTCCTACTTACCTCCAGAAGCACCCTTTCACCTCTGCCTTACTCGTAATTGTCTCTCTCCTCCGTCCACACATTCGAACTCAGGAATCAAAATCAGAGGGAAATAG

mRNA sequence

ATGTTGCCATGTGCCGTTTTGCACAATGCTCCGTGTAGTATCAGGACTCGGACTCACCGCATAATTGATCTTCTTCCGCTATCACCGCCGGCGACCACCTCCTACTTACCTCCAGAAGCACCCTTTCACCTCTGCCTTACTCGTAATTGTCTCTCTCCTCCGTCCACACATTCGAACTCAGGAATCAAAATCAGAGGGAAATAG

Coding sequence (CDS)

ATGTTGCCATGTGCCGTTTTGCACAATGCTCCGTGTAGTATCAGGACTCGGACTCACCGCATAATTGATCTTCTTCCGCTATCACCGCCGGCGACCACCTCCTACTTACCTCCAGAAGCACCCTTTCACCTCTGCCTTACTCGTAATTGTCTCTCTCCTCCGTCCACACATTCGAACTCAGGAATCAAAATCAGAGGGAAATAG

Protein sequence

MLPCAVLHNAPCSIRTRTHRIIDLLPLSPPATTSYLPPEAPFHLCLTRNCLSPPSTHSNSGIKIRGK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15340.1Spo15340.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15340.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15340.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15340.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15340.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0050821 protein stabilization
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005777 peroxisome
molecular_function GO:0016168 chlorophyll binding
RNA-Seq Expression