Spo15246 (gene) | SpinachBase

Overview


Name	Spo15246
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family
Location	chr4 : 80572939 .. 80573253 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATTAGGAAATCAAGCAAGCTACCTCAAGCAGCATTGCTAAAGCAAATCCTTAAGAGATGTTCGAGCTTAGGGAAAAAGCATGGTTACGACGAAGATGGTCTTCCCCTTGATGTTCCAAAAGGCCATTTTGCTGTCTATGTAGGACAGAATAGGAGTAGATACATTGTGCCTATTTCCTTTTTGTCTCATCCCGAGTTCCAATGCTTGCTTCGACGAGCTGAAGAGGAGTTCGGGTTTGATCATGATATGGGACTTACGATCCCTTGTGAAGAAGTCGTTTTTCGTTCTCTTACTTCCATGCTTAGGTGA

mRNA sequence

ATGGCTATTAGGAAATCAAGCAAGCTACCTCAAGCAGCATTGCTAAAGCAAATCCTTAAGAGATGTTCGAGCTTAGGGAAAAAGCATGGTTACGACGAAGATGGTCTTCCCCTTGATGTTCCAAAAGGCCATTTTGCTGTCTATGTAGGACAGAATAGGAGTAGATACATTGTGCCTATTTCCTTTTTGTCTCATCCCGAGTTCCAATGCTTGCTTCGACGAGCTGAAGAGGAGTTCGGGTTTGATCATGATATGGGACTTACGATCCCTTGTGAAGAAGTCGTTTTTCGTTCTCTTACTTCCATGCTTAGGTGA

Coding sequence (CDS)

ATGGCTATTAGGAAATCAAGCAAGCTACCTCAAGCAGCATTGCTAAAGCAAATCCTTAAGAGATGTTCGAGCTTAGGGAAAAAGCATGGTTACGACGAAGATGGTCTTCCCCTTGATGTTCCAAAAGGCCATTTTGCTGTCTATGTAGGACAGAATAGGAGTAGATACATTGTGCCTATTTCCTTTTTGTCTCATCCCGAGTTCCAATGCTTGCTTCGACGAGCTGAAGAGGAGTTCGGGTTTGATCATGATATGGGACTTACGATCCCTTGTGAAGAAGTCGTTTTTCGTTCTCTTACTTCCATGCTTAGGTGA

Protein sequence

MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo15246.1	Spo15246.1	mRNA

Homology

[Close]

BLAST of Spo15246.1 vs. NCBI nr
Match: gi|902198471|gb|KNA13679.1| (hypothetical protein SOVF_114490 [Spinacia oleracea])

HSP 1 Score: 216.9 bits (551), Expect = 1.700e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI
Sbjct: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. NCBI nr
Match: gi|590685036|ref|XP_007041995.1| (SAUR family protein [Theobroma cacao])

HSP 1 Score: 211.8 bits (538), Expect = 5.500e-52
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKSSKLPQ A+LKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAIRKSSKLPQTAVLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFL+HPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLTHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. NCBI nr
Match: gi|661898981|emb|CDO96975.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 208.0 bits (528), Expect = 8.000e-51
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = 1


		  
Query: 1   MAIRK-SSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVP 60
           MAIRK SSKLPQAA++KQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVP
Sbjct: 1   MAIRKSSSKLPQAAVIKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           ISFL+HPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  ISFLTHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105

[Close]

BLAST of Spo15246.1 vs. NCBI nr
Match: gi|225427810|ref|XP_002270504.1| (PREDICTED: auxin-induced protein 15A [Vitis vinifera])

HSP 1 Score: 207.6 bits (527), Expect = 1.000e-50
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKS+KLPQ A+LKQILKRCSSLGKK+GYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAIRKSNKLPQTAVLKQILKRCSSLGKKNGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHPEFQCLL+RAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQCLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. NCBI nr
Match: gi|731370891|ref|XP_010665869.1| (PREDICTED: auxin-induced protein 15A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 206.5 bits (524), Expect = 2.300e-50
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MA RKS+KL Q+ALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAQRKSNKLSQSALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHP+FQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPQFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R417_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114490 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.200e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI
Sbjct: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Match: A0A061E0H6_THECC (SAUR family protein OS=Theobroma cacao GN=TCM_006757 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.900e-52
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKSSKLPQ A+LKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAIRKSSKLPQTAVLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFL+HPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLTHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Match: A0A068TKX6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014174001 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.600e-51
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = 1


		  
Query: 1   MAIRK-SSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVP 60
           MAIRK SSKLPQAA++KQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVP
Sbjct: 1   MAIRKSSSKLPQAAVIKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           ISFL+HPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  ISFLTHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105

[Close]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Match: A5AQT6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00950 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 7.300e-51
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MAIRKS+KLPQ A+LKQILKRCSSLGKK+GYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAIRKSNKLPQTAVLKQILKRCSSLGKKNGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHPEFQCLL+RAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQCLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5L6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g224450 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.600e-50
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MA RKS+KL Q+ALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVG+NRSRYIVPI
Sbjct: 1   MAQRKSNKLSQSALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFLSHP+FQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPQFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104

[Close]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.000e-17
Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 1


		  
Query: 38  LDVPKGHFAVYVGQNRSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVF 97
           LD PKG+ AVYVG+N  R+++P+S L+ P FQ LL +AEEEFG+DH M GLTIPC E +F
Sbjct: 23  LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

Query: 98  RSLTSML 104
           + +TS L
Sbjct: 83  QHITSCL 89

[Close]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.600e-17
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1


		  
Query: 39  DVPKGHFAVYVGQNRSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVFR 98
           D PKG+ AVYVG+   R+++P+S+L+ P FQ LL +AEEEFG+DH M GLTIPC E VF+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 99  SLTSML 104
            +TS L
Sbjct: 76  CITSCL 81

[Close]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.500e-17
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 1


		  
Query: 38  LDVPKGHFAVYVGQNRSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVF 97
           +D PKG+ AVYVG+   R+++P+S+++ P FQ LL +AEEEFG+DH M GLTIPC E VF
Sbjct: 15  VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVF 74

Query: 98  RSLTSML 104
           + +T  L
Sbjct: 75  QRITCCL 81

[Close]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.300e-16
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 1


		  
Query: 38  LDVPKGHFAVYVGQNRSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVF 97
           ++VPKG+  VYVG    R+++P+S+L+ P FQ LL +AEEEFG+DH M GLTIPC+E  F
Sbjct: 23  VEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEF 82

Query: 98  RSLTSML 104
            ++TS L
Sbjct: 83  LTVTSHL 89

[Close]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.300e-16
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1


		  
Query: 41  PKGHFAVYVGQN-RSRYIVPISFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVFRS 100
           PKG  AVYVG++ + RY+VP+S+LS P FQ LL ++EEEFGFDH M GLTIPC E  F +
Sbjct: 23  PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 101 LTSMLR 105
           +TS L+
Sbjct: 83  VTSRLQ 88

[Close]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 177.9 bits (450), Expect = 3.100e-45
Identity = 84/104 (80.77%), Postives = 97/104 (93.27%), Query Frame = 1


		  
Query: 3   IRKSSKLPQAALLKQILKRCSSLGKKHG--YDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 62
           ++K+SKL Q A+LKQILKRCSSLGKK+G  YDED LPLDVPKGHF VYVG+NRSRYIVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 63  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           SFL+HPEFQ LL+RAEEEFGFDHDMGLTIPC+E+VF++LTSM+R
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 175.3 bits (443), Expect = 2.000e-44
Identity = 81/103 (78.64%), Postives = 94/103 (91.26%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MA+++SSKL Q A+LKQILKRCSSL K   YDEDGLP+DVPKGHF VYVG+ RSRYIVPI
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAKNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSML 104
           SFL+HP+F+ LL++AEEEFGF+HDMGLTIPCEEVVFRSLTSM+
Sbjct: 61  SFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 172.2 bits (435), Expect = 1.700e-43
Identity = 83/105 (79.05%), Postives = 94/105 (89.52%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKKHGYDEDGLPLDVPKGHFAVYVGQNRSRYIVPI 60
           MA+++SSKL Q A+LKQILKRCSSLGKK  YDE+GLPLDVPKGHF VYVG+ R+RYIVPI
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKKQCYDEEGLPLDVPKGHFPVYVGEKRTRYIVPI 60

Query: 61  SFLSHPEFQCLLRRAEEEFGFDHDM-GLTIPCEEVVFRSLTSMLR 105
           SFL+HPEF  LL++AEEEFGF HDM GLTIPCEEVVF SLTSM+R
Sbjct: 61  SFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 171.8 bits (434), Expect = 2.200e-43
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1


		  
Query: 1   MAIRKSSKLPQAALLKQILKRCSSLGKK----HGYDEDGLPLDVPKGHFAVYVGQNRSRY 60
           MA++K++KL Q A++KQILKRCSSLGKK    +G DE+G PL+VPKGHF VYVG+NR RY
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 61  IVPISFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           +VPISFL+ PEFQ LL++AEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  VVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 167.2 bits (422), Expect = 5.500e-42
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 1


		  
Query: 3   IRKSSKLPQAALLKQILKRCSSLGKKHG---YDEDGLPLDVPKGHFAVYVGQNRSRYIVP 62
           ++KS+KL Q A+L+QILKRCSSLGKK+G   Y+E  LPLDVPKGHF VYVG NRSRYIVP
Sbjct: 4   LKKSTKLAQTAMLRQILKRCSSLGKKNGGGGYEEVDLPLDVPKGHFPVYVGHNRSRYIVP 63

Query: 63  ISFLSHPEFQCLLRRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 105
           ISFL++ +FQCLLRRAEEEFGFDHDMGLTIPC+E+ F+ LTSM+R
Sbjct: 64  ISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMIR 108

The following BLAST results are available for this feature:

BLAST of Spo15246.1 vs. NCBI nr
BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
BLAST of Spo15246.1 vs. TAIR (Arabidopsis)

BLAST of Spo15246.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198471\|gb\|KNA13679.1\|	1.7e-53	100.	hypothetical protein SOVF_1144...	[more]
gi\|590685036\|ref\|XP_007041995.1\|	5.5e-52	96.1	SAUR family protein [Theobroma...	[more]
gi\|661898981\|emb\|CDO96975.1\|	8.0e-51	95.2	unnamed protein product [Coffe...	[more]
gi\|225427810\|ref\|XP_002270504.1\|	1.0e-50	94.2	PREDICTED: auxin-induced prote...	[more]
gi\|731370891\|ref\|XP_010665869.1\|	2.3e-50	94.2	PREDICTED: auxin-induced prote...	[more]

BLAST of Spo15246.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R417_SPIOL	1.2e-53	100.	Uncharacterized protein OS=Spi...	[more]
A0A061E0H6_THECC	3.9e-52	96.1	SAUR family protein OS=Theobro...	[more]
A0A068TKX6_COFCA	5.6e-51	95.2	Uncharacterized protein OS=Cof...	[more]
A5AQT6_VITVI	7.3e-51	94.2	Putative uncharacterized prote...	[more]
A0A0J8B5L6_BETVU	1.6e-50	94.2	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo15246.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ARG7_VIGRR	2.0e-17	59.7	Indole-3-acetic acid-induced p...	[more]
AX15A_SOYBN	2.6e-17	59.0	Auxin-induced protein 15A OS=G...	[more]
AXX15_SOYBN	7.5e-17	55.2	Auxin-induced protein X15 OS=G...	[more]
AX10A_SOYBN	8.3e-16	55.2	Auxin-induced protein X10A OS=...	[more]
SAU21_ARATH	8.3e-16	60.6	Auxin-responsive protein SAUR2...	[more]

BLAST of Spo15246.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G34760.1	3.1e-45	80.7	SAUR-like auxin-responsive pro...	[more]
AT2G21220.1	2.0e-44	78.6	SAUR-like auxin-responsive pro...	[more]
AT4G38860.1	1.7e-43	79.0	SAUR-like auxin-responsive pro...	[more]
AT1G75580.1	2.2e-43	75.9	SAUR-like auxin-responsive pro...	[more]
AT2G16580.1	5.5e-42	75.2	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 33..103 score: 4.0
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 3..104 score: 7.9
None	No IPR available	PANTHER	PTHR31374:SF35	AUXIN-INDUCED PROTEIN-RELATED	coord: 3..104 score: 7.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo20441	0.69	Barchart \| Table
Spo21021	0.66	Barchart \| Table