Spo15007 (gene)

Overview
NameSpo15007
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01133 : 142552 .. 142998 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCATCTTAAAACCATTATCACCATCTTACTCATGCTTATTACAACATCTCTAGCTCGTTATAACTCCTTTGGGGAAGGCGGTGGTGGAGGGCGGAGAGTGGAGATGACGCCGGACGTGTATTCATCTCCATCATCACAAGTTAATAACCAAGGCATGGAGGGGACAACAACGGGCGCCACCGGCTCAGCCCATGGCCCGAATGGGGAATATGGATGGGGTTGGGGTGCCGGTCCAAGAAGCGGTTGGGGATATGGTTACGGTTCAAGCCATTCCCCTACCGGGTTTGGACGAGGGTACGGGTTCGGATATGGGATTGGGTCTGGGTCTGGGTCCGGGTATGGATATGGGTCAGGCGGCGGTACCAGTGCTGGTGGATACGGATATGGAGCTGGGGGAGCTCATGGAGGAGGTGGGTATGGAAGTCCCTCTAACCATGGTTAA

mRNA sequence

ATGTATCATCTTAAAACCATTATCACCATCTTACTCATGCTTATTACAACATCTCTAGCTCGTTATAACTCCTTTGGGGAAGGCGGTGGTGGAGGGCGGAGAGTGGAGATGACGCCGGACGTGTATTCATCTCCATCATCACAAGTTAATAACCAAGGCATGGAGGGGACAACAACGGGCGCCACCGGCTCAGCCCATGGCCCGAATGGGGAATATGGATGGGGTTGGGGTGCCGGTCCAAGAAGCGGTTGGGGATATGGTTACGGTTCAAGCCATTCCCCTACCGGGTTTGGACGAGGGTACGGGTTCGGATATGGGATTGGGTCTGGGTCTGGGTCCGGGTATGGATATGGGTCAGGCGGCGGTACCAGTGCTGGTGGATACGGATATGGAGCTGGGGGAGCTCATGGAGGAGGTGGGTATGGAAGTCCCTCTAACCATGGTTAA

Coding sequence (CDS)

ATGTATCATCTTAAAACCATTATCACCATCTTACTCATGCTTATTACAACATCTCTAGCTCGTTATAACTCCTTTGGGGAAGGCGGTGGTGGAGGGCGGAGAGTGGAGATGACGCCGGACGTGTATTCATCTCCATCATCACAAGTTAATAACCAAGGCATGGAGGGGACAACAACGGGCGCCACCGGCTCAGCCCATGGCCCGAATGGGGAATATGGATGGGGTTGGGGTGCCGGTCCAAGAAGCGGTTGGGGATATGGTTACGGTTCAAGCCATTCCCCTACCGGGTTTGGACGAGGGTACGGGTTCGGATATGGGATTGGGTCTGGGTCTGGGTCCGGGTATGGATATGGGTCAGGCGGCGGTACCAGTGCTGGTGGATACGGATATGGAGCTGGGGGAGCTCATGGAGGAGGTGGGTATGGAAGTCCCTCTAACCATGGTTAA

Protein sequence

MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTGATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSGGGTSAGGYGYGAGGAHGGGGYGSPSNHG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15007.1Spo15007.1mRNA


Homology
[Close]
BLAST of Spo15007.1 vs. NCBI nr
Match: gi|902227861|gb|KNA20859.1| (hypothetical protein SOVF_048340 [Spinacia oleracea])

HSP 1 Score: 271.6 bits (693), Expect = 8.400e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG 60
           MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG
Sbjct: 1   MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG 60

Query: 61  ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG 120
           ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG
Sbjct: 61  ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG 120

Query: 121 GGTSAGGYGYGAGGAHGGGGYGSPSNHG 149
           GGTSAGGYGYGAGGAHGGGGYGSPSNHG
Sbjct: 121 GGTSAGGYGYGAGGAHGGGGYGSPSNHG 148
[Close]
BLAST of Spo15007.1 vs. NCBI nr
Match: gi|731345581|ref|XP_010683992.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 160.2 bits (404), Expect = 2.700e-36
Identity = 107/157 (68.15%), Postives = 117/157 (74.52%), Query Frame = 1 

		  

Query: 1   MYHLKTI---ITILLMLITTSLARYNSFGEGGGGGRRVEMTPD----VYSSPSSQVNNQG 60
           M+H K +   + IL ML+T SLARYNSFGEG  G R    +      V+SSP+    NQ 
Sbjct: 1   MHHSKNLLCLVIILYMLVTISLARYNSFGEGHEGDRMKTSSSSQQETVFSSPTI---NQD 60

Query: 61  MEGTTTGATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGS 120
            E T TGA GSAHGPN +YGWGWGAGPRSGWGYGYGSSH+PTGF RGYGFGYG GSGSGS
Sbjct: 61  SEPTPTGAVGSAHGPNWDYGWGWGAGPRSGWGYGYGSSHAPTGFARGYGFGYGSGSGSGS 120

Query: 121 GYGYGSGGGTSAGGYGYGAGGAH---GGGGYGSPSNH 148
           GYGYG+GGG  A GYGYGAGGAH   GGGG GSPSNH
Sbjct: 121 GYGYGTGGG-GASGYGYGAGGAHGGSGGGGGGSPSNH 153
[Close]
BLAST of Spo15007.1 vs. NCBI nr
Match: gi|870854708|gb|KMT06463.1| (hypothetical protein BVRB_7g161320 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 156.4 bits (394), Expect = 3.900e-35
Identity = 102/142 (71.83%), Postives = 109/142 (76.76%), Query Frame = 1 

		  

Query: 13  MLITTSLARYNSFGEGGGGGRRVEMTPD----VYSSPSSQVNNQGMEGTTTGATGSAHGP 72
           ML+T SLARYNSFGEG  G R    +      V+SSP+    NQ  E T TGA GSAHGP
Sbjct: 1   MLVTISLARYNSFGEGHEGDRMKTSSSSQQETVFSSPTI---NQDSEPTPTGAVGSAHGP 60

Query: 73  NGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSGGGTSAGGY 132
           N +YGWGWGAGPRSGWGYGYGSSH+PTGF RGYGFGYG GSGSGSGYGYG+GGG  A GY
Sbjct: 61  NWDYGWGWGAGPRSGWGYGYGSSHAPTGFARGYGFGYGSGSGSGSGYGYGTGGG-GASGY 120

Query: 133 GYGAGGAH---GGGGYGSPSNH 148
           GYGAGGAH   GGGG GSPSNH
Sbjct: 121 GYGAGGAHGGSGGGGGGSPSNH 138
[Close]
BLAST of Spo15007.1 vs. NCBI nr
Match: gi|356576179|ref|XP_003556211.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Glycine max])

HSP 1 Score: 102.1 bits (253), Expect = 8.800e-19
Identity = 77/148 (52.03%), Postives = 93/148 (62.84%), Query Frame = 1 

		  

Query: 2   YHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTGA 61
           Y LK +   LL LIT++ A        GGG R++        +P        + GT TGA
Sbjct: 6   YTLKHLALFLLFLITSTSAA------AGGGRRKLRFDMSSGGAP--------LAGTPTGA 65

Query: 62  TGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSGG 121
           TGS HG N +Y WGWG+GP +G+GYG GS  SPTGF RGYG+G+G G+GSGSGYGYGSGG
Sbjct: 66  TGSGHGANWDYSWGWGSGPGTGYGYGSGSGRSPTGFARGYGYGFGSGTGSGSGYGYGSGG 125

Query: 122 GTSAGGYGYGAG-GAHGGGGYGSPSNHG 149
           G  AGGYG G+G G  GGGGY   +  G
Sbjct: 126 GAHAGGYGSGSGSGNSGGGGYDDKNGGG 139
[Close]
BLAST of Spo15007.1 vs. NCBI nr
Match: gi|1009121799|ref|XP_015877656.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Ziziphus jujuba])

HSP 1 Score: 100.5 bits (249), Expect = 2.600e-18
Identity = 80/151 (52.98%), Postives = 91/151 (60.26%), Query Frame = 1 

		  

Query: 8   ITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTGATGSAHG 67
           I + L +  T LA     G GG GG +VE   D+ S P++        G+ TGATGS HG
Sbjct: 10  IFLTLFISATCLASKGGVGSGGSGGPKVE-PQDMTSEPNAAT------GSPTGATGSGHG 69

Query: 68  PNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGY----GIGSGSGSGYGYGS-GGG 127
           PN +Y WGWG+ P SGWGYG GS  SP GFGRG+GFG+    G GSGSGSGYGYGS GGG
Sbjct: 70  PNYDYNWGWGSSPGSGWGYGSGSGRSPDGFGRGWGFGFGSGSGSGSGSGSGYGYGSGGGG 129

Query: 128 TSAGGYGYGA-----GGAHGGGGYGSPSNHG 149
              GGYG GA     GG   GGG G    HG
Sbjct: 130 ARGGGYGSGAGSGNSGGGGSGGGSGGQGGHG 153
[Close]
BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPN7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048340 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 5.800e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG 60
           MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG
Sbjct: 1   MYHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTG 60

Query: 61  ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG 120
           ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG
Sbjct: 61  ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG 120

Query: 121 GGTSAGGYGYGAGGAHGGGGYGSPSNHG 149
           GGTSAGGYGYGAGGAHGGGGYGSPSNHG
Sbjct: 121 GGTSAGGYGYGAGGAHGGGGYGSPSNHG 148
[Close]
BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2X7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161320 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.700e-35
Identity = 102/142 (71.83%), Postives = 109/142 (76.76%), Query Frame = 1 

		  

Query: 13  MLITTSLARYNSFGEGGGGGRRVEMTPD----VYSSPSSQVNNQGMEGTTTGATGSAHGP 72
           ML+T SLARYNSFGEG  G R    +      V+SSP+    NQ  E T TGA GSAHGP
Sbjct: 1   MLVTISLARYNSFGEGHEGDRMKTSSSSQQETVFSSPTI---NQDSEPTPTGAVGSAHGP 60

Query: 73  NGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSGGGTSAGGY 132
           N +YGWGWGAGPRSGWGYGYGSSH+PTGF RGYGFGYG GSGSGSGYGYG+GGG  A GY
Sbjct: 61  NWDYGWGWGAGPRSGWGYGYGSSHAPTGFARGYGFGYGSGSGSGSGYGYGTGGG-GASGY 120

Query: 133 GYGAGGAH---GGGGYGSPSNH 148
           GYGAGGAH   GGGG GSPSNH
Sbjct: 121 GYGAGGAHGGSGGGGGGSPSNH 138
[Close]
BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Match: K7N449_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G177300 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.100e-19
Identity = 77/148 (52.03%), Postives = 93/148 (62.84%), Query Frame = 1 

		  

Query: 2   YHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTGA 61
           Y LK +   LL LIT++ A        GGG R++        +P        + GT TGA
Sbjct: 6   YTLKHLALFLLFLITSTSAA------AGGGRRKLRFDMSSGGAP--------LAGTPTGA 65

Query: 62  TGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSGG 121
           TGS HG N +Y WGWG+GP +G+GYG GS  SPTGF RGYG+G+G G+GSGSGYGYGSGG
Sbjct: 66  TGSGHGANWDYSWGWGSGPGTGYGYGSGSGRSPTGFARGYGYGFGSGTGSGSGYGYGSGG 125

Query: 122 GTSAGGYGYGAG-GAHGGGGYGSPSNHG 149
           G  AGGYG G+G G  GGGGY   +  G
Sbjct: 126 GAHAGGYGSGSGSGNSGGGGYDDKNGGG 139
[Close]
BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Match: W9S1L3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017080 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.800e-18
Identity = 76/144 (52.78%), Postives = 88/144 (61.11%), Query Frame = 1 

		  

Query: 10  ILLMLITTSLARYNSFGEGGGGGRRVEMTPDVYSSPSSQVNNQGMEGTTTGATGSAHGPN 69
           ILL+L  T  A Y   G GGG G+R+                +G  G   GA+GSAHGPN
Sbjct: 15  ILLLLTGTCFAFYTGGGGGGGSGQRMS------------TEQEGGTGAPRGASGSAHGPN 74

Query: 70  GEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGY----GIGSGSGSGYGYGSGG-GTS 129
            +Y WGWG+ P +GWGYG GS  SPTGFGRG+GFG+    G GSGSGSG+GYGSGG G  
Sbjct: 75  WDYSWGWGSSPGAGWGYGSGSGRSPTGFGRGFGFGFGSGSGSGSGSGSGFGYGSGGDGAR 134

Query: 130 AGGYGYGAGGAHGGGGYGSPSNHG 149
            GG GYGAG  + GGG G  S  G
Sbjct: 135 GGGNGYGAGSGNSGGGGGGGSGSG 146
[Close]
BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.800e-18
Identity = 76/151 (50.33%), Postives = 94/151 (62.25%), Query Frame = 1 

		  

Query: 2   YHLKTIITILLMLITTSLARYNSFGEGGGGGRRVEMTPDV-YSSPSSQVNNQGMEGTTTG 61
           +HL ++  +L +L ++S          G   R++   PD+ + SPS      G  G  TG
Sbjct: 7   FHLSSLFFLLFVLTSSSTVSC------GATPRKLLNFPDMSWGSPSG--GGGGGNGNPTG 66

Query: 62  ATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGYGYGSG 121
           A GS HGPN +Y WGWG+ P SGWG+G GS  SPTGFG+GYG+G+G GSGSGSGYGYGSG
Sbjct: 67  AYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSG 126

Query: 122 -GGTSAGGYGYG-----AGGAHGGGGYGSPS 146
            GG   GGYG G     +GG   GGGYG PS
Sbjct: 127 SGGAHGGGYGSGSGYGNSGGGGSGGGYGGPS 149
[Close]
BLAST of Spo15007.1 vs. TAIR (Arabidopsis)
Match: AT5G61660.1 (glycine-rich protein)

HSP 1 Score: 84.7 bits (208), Expect = 5.100e-17
Identity = 59/94 (62.77%), Postives = 66/94 (70.21%), Query Frame = 1 

		  

Query: 56  GTTTGATGSAHGPNGEYGWGWGAGPRSGWGYGYGSSHSPTGFGRGYGFGYGIGSGSGSGY 115
           G   G +GS  GPN EY WGWG+ P SGWGYG GS  SPTG+GRG G+GYG GSGSG+GY
Sbjct: 28  GNMPGESGSGRGPNWEYNWGWGSAPGSGWGYGAGSGRSPTGWGRGSGYGYGSGSGSGTGY 87

Query: 116 GYGS-GGGTSAGGYGYGAGGAHGGGGYGSPSNHG 149
           GYGS GGG   GGYGYG+G    GGG G    +G
Sbjct: 88  GYGSGGGGARGGGYGYGSGNGRSGGGGGGGGFNG 121
The following BLAST results are available for this feature:
BLAST of Spo15007.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902227861|gb|KNA20859.1|8.4e-70100.hypothetical protein SOVF_0483... [more]
gi|731345581|ref|XP_010683992.1|2.7e-3668.1PREDICTED: glycine-rich cell w... [more]
gi|870854708|gb|KMT06463.1|3.9e-3571.8hypothetical protein BVRB_7g16... [more]
gi|356576179|ref|XP_003556211.1|8.8e-1952.0PREDICTED: glycine-rich cell w... [more]
gi|1009121799|ref|XP_015877656.1|2.6e-1852.9PREDICTED: glycine-rich cell w... [more]
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BLAST of Spo15007.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RPN7_SPIOL5.8e-70100.Uncharacterized protein OS=Spi... [more]
A0A0J8C2X7_BETVU2.7e-3571.8Uncharacterized protein OS=Bet... [more]
K7N449_SOYBN6.1e-1952.0Uncharacterized protein OS=Gly... [more]
W9S1L3_9ROSA1.8e-1852.7Uncharacterized protein OS=Mor... [more]
A0A0A0KXP2_CUCSA8.8e-1850.3Uncharacterized protein OS=Cuc... [more]
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BLAST of Spo15007.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15007.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G61660.15.1e-1762.7glycine-rich protein[more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0051604 protein maturation
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0009723 response to ethylene
biological_process GO:0009414 response to water deprivation
biological_process GO:0009611 response to wounding
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0032259 methylation
biological_process GO:0006364 rRNA processing
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0001510 RNA methylation
biological_process GO:0006342 chromatin silencing
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0009202 deoxyribonucleoside triphosphate biosynthetic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006606 protein import into nucleus
biological_process GO:0042753 positive regulation of circadian rhythm
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0009909 regulation of flower development
biological_process GO:0010114 response to red light
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0006396 RNA processing
biological_process GO:0070475 rRNA base methylation
biological_process GO:0030488 tRNA methylation
biological_process GO:0006508 proteolysis
biological_process GO:0071702 organic substance transport
biological_process GO:0006260 DNA replication
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0050896 response to stimulus
biological_process GO:0009561 megagametogenesis
biological_process GO:0000723 telomere maintenance
biological_process GO:0009987 cellular process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009308 amine metabolic process
biological_process GO:0033036 macromolecule localization
biological_process GO:0009186 deoxyribonucleoside diphosphate metabolic process
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005971 ribonucleoside-diphosphate reductase complex
cellular_component GO:0009360 DNA polymerase III complex
cellular_component GO:0016020 membrane
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0010319 stromule
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005777 peroxisome
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005730 nucleolus
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0005643 nuclear pore
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0016629 12-oxophytodienoate reductase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005524 ATP binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function GO:0005515 protein binding
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016656 monodehydroascorbate reductase (NADH) activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo035270.74Barchart | Table
Spo111950.74Barchart | Table
Spo102690.73Barchart | Table
Spo232920.72Barchart | Table
Spo212800.72Barchart | Table
Spo256350.71Barchart | Table
Spo184490.71Barchart | Table
Spo217640.71Barchart | Table
Spo023800.71Barchart | Table
Spo203260.71Barchart | Table
Spo247030.69Barchart | Table
Spo031050.69Barchart | Table
Spo245730.69Barchart | Table
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