Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAATAAATACGTCAGTGTTTTAACCACACATTTTATTTTACTTTTGTGACAAAATTAGTCTAAATCGTAAGGAAAAATTTTCAAGGAAAACAAGAAGAGGGAGTAGTAAAAAATAAAACAAAAAGAGAGAGAGAGAAAAAGAAAAAGGTAAAATGGGGTTTAGGTGAGGAGAGGTACAGGGTTGTGGGTTATCCTGAAAACAACCAGAAAATGACATCCGGGCCTCTCTCATAATTTAAAGATGAACAAGATTCATTCTTAATTTCTCTCCAATTCTCCCCCTCCCACATTCTCACTCACTCACTCAATCTCCCTCCCTCCTTTTTAATTTTTTTTTTTTTTAAATTTTTAGTTTTTATAATAATCTGAAATCCTATGATTACGATTGATGAGAAATGATTTACAATGATTTATATGGAGGGTAGTGATTAGTATGATCCCCACCCACCATCACCACCTTCACCTTCTCCTCTAATCTTCACTTACTTACTTTCTCTCTCTTCCCCCTTTTCAGTTTCTTCTCAATTTTTGTCTTTTGGGGTTCTTTAATTTTCATTTTTTGATTTTATTTTTAGGTTTTTCTTTTTAACCCAAGAAGAAATAATACATTTTATTTTGAAGGGGTGGATTGAATTTAAATTAAAATAAAATAAGGAATCTTGATTAGATTCTGGGTATAAAACTCCTGACGGAAAAAAAGGGGTGGATATATATAGGAAAACAAAAAGATGGGGAATGTAAATGGTAGAGAAGATGGGAGCAGAAGTCCATCGGATTCTGGGGTTGTAATTGAAGAAGAGGAAGATGATGATGAGTTTGTTAGTAGTGATGCTGCTGCTCCACCTCTCATGGCCCACTCTCCTCCTCACACTCCCATTTCTGTCCAATCTCCCCTCAAGTTTGCTCCTCAGGTATTGTTTCATCGATTCATTCTTTGTATTTGGCTTTCCAATTGGTTTGTGGGGGTTCAGATTTACTTCTTTTGAGATTGTTAGAGATGTTTTTTGTTGAAATTGTACTGCTCCTAAGAAGAGGTGTTTAATTGGGGGTTTTTATTTTTCAATTGTTTAAAATGTTGCTGATGAATTATGCATTCCATCAACCAAGTTCCAATATAGATGCTGTTAGTTGCTGCGTTTAACTATTTTATTGAAGCTCTAGCTTCCTAAATTTCACATTATGCTATTTGGGTCTCTTGTAATATGCTCATTAATTATTGTCATTACTTTATGTATAGAGTAAGGGATAATTATTTATGGATTTATGATTAAGCAACATTGCAGATGCTGATTTCTTGTATTCTTTTTTACGTATTTAGGTTTTCTGGCTTAATTATCCAGGGGTATATTGTGTGTGTGTTGGGTGCAATTGTTAGGGTTATGGAACAACTTTTACTTATTGTTGCCTTGTTTTAATCTATGTCCTTTTCCCATAGCCCCCCGTGGCTCCGATACAAATACCTGATGAGCTGCATATCCCAAATCCATCATGGTTACATTCATCGCCACCTGAAGAAGAAATGAGCTATGAGCAAGGAATTCCGACTATGTTCACTTGGAGTTCAGGTGGCAAGGAAGTGGCTGTTGAGGGTTCATGGGACAACTGGAAGACAAGGTTCTATAAGCTCTTTTCATCTTATTGATTTGTATGACAATTGCAGTGTGTGATAAATGTAACGAGCTCTCAGTATTTCTTGCCTAATCTTAACTATCGTTTGTCTTCAGAAAACCTCTACAGAAATCAGGGAAAGACTTTACACTCATGAAAGTGCTGCCGTCAGGAGTTTACCAATATAGGTTTATTGTTGACGGGGCGTGGAGATATGCACCCGATATACCGTGGATCCAGGATGAGACTGGAAATTATTACAATGTTTTGGATTTGCAGGTAAACCACTTGTCCTTTAGACTTTTCTTGAATTTATCATAATGGAAATGCACTCTTAAATGTTCTGTCTTATGAAACTCTACTTGTGGGTCATGGTCACTGGAGTGTACTGGTGCCATTATCTATCCTTTTCCCTATTTCAACTCATAGTTCTATCGCCTGTTATACTTATCTCTGATGACAGCAGAATCGATCTTGAAAACTTTGTCTCTTATCCTGTGACTTAACCCTTACTAGTCATGAGTAGGAGTGATATACTAGAGTTAGAGAAGGTAGCGAGAAATCTAATAATTGTTACAGAATTTTGTATCTTTGCTAGAAATTAAATGACAGAAATTAATAGATATGATATTATAAAACATATAGCTCAATATTCTTGTCTGGAAAGAGATTACTGACTTGACCAATCTCCATTTACCACCAACCTGTAAAAGGTTTGCGCTGTGAATGTGGCTTGATAAGCCAAAGGTTATCCTCATCAAATGTCCTCTGAGATTCTCTCTATCTAGTTGCTGCTTGTGCAAATTGGATATTGTTCTGTTAGTGCCATGAGATGTGCTCTGTCATCATAGCTGAGAAGGTCACTAGTGATGTGACCTTAGTCATGAAGAATAGATACTTTCTTTTGAGAAATAATTGAGGAATCTTTTTTCAGAATTGAAAAAGGACCCAACGCTTAACACGCGTCACACCCAAGTGGTTAAGCTAAATAAACCTTATTCTTGGCTTCTGAAAAAACTTGAGGAGCTTGGATTAATGAAGACTTGCAGAATAGGACCATAAAGGATAAGCTACAAACAGACTTTTCTTATGTTTGATGACACTGTTGTAATATCTCCATCTAATATTGTTATTTTGATTTAGAAGAGTGTGTCCATTCTAGGTTGATTAAGATTTTGTGATTCACCAATAAATTGTGATGAACAAATGCAGGATTATGTCCCTGAAGACACAGAGAGTATTTCAGGATTTGAGCCACCACAATCTCCGGATGGTAGCTATAATAACACAGAACTTAACCAAGAAGATTTTGCAAAGGAACCACCATTCGTTCCTCCACACCTTAACATGACCTTGCTTAATGTACCCCCTCTGTGCACAGAGATGCCGCCACCTTCTCTTTCAAGACCTCAATACGTGGTTCTTAATCATCTTTACATGCAGAAGGGAAAGAGCGGTCCATCAGTTGTTGCGCTTGGCTCTACACATAGGTTCAAGGCCAAGTATGTGACTGTTGTACTCTACAAGTCTCTGTAG ATAATAAATACGTCAGTGTTTTAACCACACATTTTATTTTACTTTTGTGACAAAATTAGTCTAAATCGTAAGGAAAAATTTTCAAGGAAAACAAGAAGAGGGAGTAGTAAAAAATAAAACAAAAAGAGAGAGAGAGAAAAAGAAAAAGGTAAAATGGGGTTTAGGTGAGGAGAGGTACAGGGTTGTGGGTTATCCTGAAAACAACCAGAAAATGACATCCGGGCCTCTCTCATAATTTAAAGATGAACAAGATTCATTCTTAATTTCTCTCCAATTCTCCCCCTCCCACATTCTCACTCACTCACTCAATCTCCCTCCCTCCTTTTTAATTTTTTTTTTTTTTAAATTTTTAGTTTTTATAATAATCTGAAATCCTATGATTACGATTGATGAGAAATGATTTACAATGATTTATATGGAGGGTAGTGATTAGTATGATCCCCACCCACCATCACCACCTTCACCTTCTCCTCTAATCTTCACTTACTTACTTTCTCTCTCTTCCCCCTTTTCAGTTTCTTCTCAATTTTTGTCTTTTGGGGTTCTTTAATTTTCATTTTTTGATTTTATTTTTAGGTTTTTCTTTTTAACCCAAGAAGAAATAATACATTTTATTTTGAAGGGGTGGATTGAATTTAAATTAAAATAAAATAAGGAATCTTGATTAGATTCTGGGTATAAAACTCCTGACGGAAAAAAAGGGGTGGATATATATAGGAAAACAAAAAGATGGGGAATGTAAATGGTAGAGAAGATGGGAGCAGAAGTCCATCGGATTCTGGGGTTGTAATTGAAGAAGAGGAAGATGATGATGAGTTTGTTAGTAGTGATGCTGCTGCTCCACCTCTCATGGCCCACTCTCCTCCTCACACTCCCATTTCTGTCCAATCTCCCCTCAAGTTTGCTCCTCAGCCCCCCGTGGCTCCGATACAAATACCTGATGAGCTGCATATCCCAAATCCATCATGGTTACATTCATCGCCACCTGAAGAAGAAATGAGCTATGAGCAAGGAATTCCGACTATGTTCACTTGGAGTTCAGGTGGCAAGGAAGTGGCTGTTGAGGGTTCATGGGACAACTGGAAGACAAGAAAACCTCTACAGAAATCAGGGAAAGACTTTACACTCATGAAAGTGCTGCCGTCAGGAGTTTACCAATATAGGTTTATTGTTGACGGGGCGTGGAGATATGCACCCGATATACCGTGGATCCAGGATGAGACTGGAAATTATTACAATGTTTTGGATTTGCAGGATTATGTCCCTGAAGACACAGAGAGTATTTCAGGATTTGAGCCACCACAATCTCCGGATGGTAGCTATAATAACACAGAACTTAACCAAGAAGATTTTGCAAAGGAACCACCATTCGTTCCTCCACACCTTAACATGACCTTGCTTAATGTACCCCCTCTGTGCACAGAGATGCCGCCACCTTCTCTTTCAAGACCTCAATACGTGGTTCTTAATCATCTTTACATGCAGAAGGGAAAGAGCGGTCCATCAGTTGTTGCGCTTGGCTCTACACATAGGTTCAAGGCCAAGTATGTGACTGTTGTACTCTACAAGTCTCTGTAG ATGGGGAATGTAAATGGTAGAGAAGATGGGAGCAGAAGTCCATCGGATTCTGGGGTTGTAATTGAAGAAGAGGAAGATGATGATGAGTTTGTTAGTAGTGATGCTGCTGCTCCACCTCTCATGGCCCACTCTCCTCCTCACACTCCCATTTCTGTCCAATCTCCCCTCAAGTTTGCTCCTCAGCCCCCCGTGGCTCCGATACAAATACCTGATGAGCTGCATATCCCAAATCCATCATGGTTACATTCATCGCCACCTGAAGAAGAAATGAGCTATGAGCAAGGAATTCCGACTATGTTCACTTGGAGTTCAGGTGGCAAGGAAGTGGCTGTTGAGGGTTCATGGGACAACTGGAAGACAAGAAAACCTCTACAGAAATCAGGGAAAGACTTTACACTCATGAAAGTGCTGCCGTCAGGAGTTTACCAATATAGGTTTATTGTTGACGGGGCGTGGAGATATGCACCCGATATACCGTGGATCCAGGATGAGACTGGAAATTATTACAATGTTTTGGATTTGCAGGATTATGTCCCTGAAGACACAGAGAGTATTTCAGGATTTGAGCCACCACAATCTCCGGATGGTAGCTATAATAACACAGAACTTAACCAAGAAGATTTTGCAAAGGAACCACCATTCGTTCCTCCACACCTTAACATGACCTTGCTTAATGTACCCCCTCTGTGCACAGAGATGCCGCCACCTTCTCTTTCAAGACCTCAATACGTGGTTCTTAATCATCTTTACATGCAGAAGGGAAAGAGCGGTCCATCAGTTGTTGCGCTTGGCTCTACACATAGGTTCAAGGCCAAGTATGTGACTGTTGTACTCTACAAGTCTCTGTAG MGNVNGREDGSRSPSDSGVVIEEEEDDDEFVSSDAAAPPLMAHSPPHTPISVQSPLKFAPQPPVAPIQIPDELHIPNPSWLHSSPPEEEMSYEQGIPTMFTWSSGGKEVAVEGSWDNWKTRKPLQKSGKDFTLMKVLPSGVYQYRFIVDGAWRYAPDIPWIQDETGNYYNVLDLQDYVPEDTESISGFEPPQSPDGSYNNTELNQEDFAKEPPFVPPHLNMTLLNVPPLCTEMPPPSLSRPQYVVLNHLYMQKGKSGPSVVALGSTHRFKAKYVTVVLYKSL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14819.1 vs. NCBI nr
Match: gi|902202102|gb|KNA14164.1| (hypothetical protein SOVF_110020 [Spinacia oleracea]) HSP 1 Score: 580.1 bits (1494), Expect = 2.100e-162 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1
BLAST of Spo14819.1 vs. NCBI nr
Match: gi|731350675|ref|XP_010686626.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 498.4 bits (1282), Expect = 8.000e-138 Identity = 243/283 (85.87%), Postives = 261/283 (92.23%), Query Frame = 1
BLAST of Spo14819.1 vs. NCBI nr
Match: gi|359496111|ref|XP_002270146.2| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Vitis vinifera]) HSP 1 Score: 397.9 bits (1021), Expect = 1.500e-107 Identity = 206/300 (68.67%), Postives = 225/300 (75.00%), Query Frame = 1
BLAST of Spo14819.1 vs. NCBI nr
Match: gi|566207979|ref|XP_002322502.2| (hypothetical protein POPTR_0016s00810g [Populus trichocarpa]) HSP 1 Score: 395.6 bits (1015), Expect = 7.300e-107 Identity = 200/291 (68.73%), Postives = 230/291 (79.04%), Query Frame = 1
BLAST of Spo14819.1 vs. NCBI nr
Match: gi|743893848|ref|XP_011040167.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Populus euphratica]) HSP 1 Score: 392.1 bits (1006), Expect = 8.100e-106 Identity = 199/292 (68.15%), Postives = 229/292 (78.42%), Query Frame = 1
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5G0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110020 PE=4 SV=1) HSP 1 Score: 580.1 bits (1494), Expect = 1.500e-162 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWN6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g184410 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 5.600e-138 Identity = 243/283 (85.87%), Postives = 261/283 (92.23%), Query Frame = 1
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Match: F6GZ00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0259g00150 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.000e-107 Identity = 206/300 (68.67%), Postives = 225/300 (75.00%), Query Frame = 1
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Match: B9IH18_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00810g PE=4 SV=2) HSP 1 Score: 395.6 bits (1015), Expect = 5.100e-107 Identity = 200/291 (68.73%), Postives = 230/291 (79.04%), Query Frame = 1
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Match: B9HCD2_POPTR (5'-AMP-activated protein kinase beta-2 subunit OS=Populus trichocarpa GN=POPTR_0006s00760g PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 9.600e-106 Identity = 198/292 (67.81%), Postives = 229/292 (78.42%), Query Frame = 1
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Match: KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.900e-102 Identity = 193/293 (65.87%), Postives = 226/293 (77.13%), Query Frame = 1
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Match: KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.200e-62 Identity = 137/292 (46.92%), Postives = 182/292 (62.33%), Query Frame = 1
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Match: AAKB2_RAT (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus GN=Prkab2 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.800e-29 Identity = 76/202 (37.62%), Postives = 105/202 (51.98%), Query Frame = 1
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Match: AAKB2_HUMAN (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.600e-29 Identity = 76/202 (37.62%), Postives = 105/202 (51.98%), Query Frame = 1
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Match: AAKB2_MOUSE (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus GN=Prkab2 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.700e-29 Identity = 76/202 (37.62%), Postives = 105/202 (51.98%), Query Frame = 1
BLAST of Spo14819.1 vs. TAIR (Arabidopsis)
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein) HSP 1 Score: 367.9 bits (943), Expect = 5.800e-102 Identity = 179/248 (72.18%), Postives = 205/248 (82.66%), Query Frame = 1
BLAST of Spo14819.1 vs. TAIR (Arabidopsis)
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein) HSP 1 Score: 219.5 bits (558), Expect = 2.500e-57 Identity = 136/329 (41.34%), Postives = 181/329 (55.02%), Query Frame = 1
BLAST of Spo14819.1 vs. TAIR (Arabidopsis)
Match: AT2G28060.1 (5'-AMP-activated protein kinase beta-2 subunit protein) HSP 1 Score: 84.3 bits (207), Expect = 1.300e-16 Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14819.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14819.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14819.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14819.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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