Spo14757 (gene)

Overview
NameSpo14757
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L30
Locationchr6 : 36079227 .. 36081094 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAACATAAACTCATTTCAGGCAGGTTTATTTTACGGGCTTTTACAATTCCATATTTATAAATAACCGTAAGTTCATCTCAAAAACCCTAATTGCTCAAGCCATCTCTAGTGTTGTTCATCTCTTTCTTGAAGCTCTCTCATCAACCTTCGCCGACGCCGCAATGGCCCCTTCCAAGAAGACGGTACTAATTTTTCCTCTCCAATTCATTATCATCAGTTCCTGTTAATTGAAATGTCTAATTGATTGATGATTTAAACAAAAATTAAAAATTGAATGTTTGGTTGAATTTGCAGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGGTAAACCCTAATTTTTTATTTAACATTTCTCAGTTTTGATTTTTTATTTTAAAGTTAGTATATTCTGTTCCCTGTTGTTGTAGCTGATTAATTTGCGAAGTTTTAGATCATTTTGAAGTCATTGTAAAAATAATAAAAATTGATTTATGAACTTGTGTTTGTTTATCTAATTTCTTCGGTGAAAATCCTGATGAATATGGTTTGCAAGAATATATTTTAGCTCCATCTGTATCTATTTAATCAGAACAAAGCCAAAAACCTGTTAATCCATTGAAAATCAGAACAAATTATATGCCTAATACAAATTCACTTTCTCTTATTCCTACTGCATTTGCACGTAAATTCAATCATTACTTACTCTTCACTCGACTTTTAATAAATTGCTAACTTTTTTGGCTGAATCAAAACGGCTTTATAATTGTTTACTTGTTTTCTTTTTATATGAAGTTGTATTTCTGTACTAATTAAAGCTTAATTTTGGGATCATAAATGTTTTGTTGATTGTGCTCTGGGTCGTGATGGCCTAATTGTGGTTGTTGAATATGTGGTTTAGTGGACATTCTAGTATTCTAAATTCATTTGCCCGTTTGTCTCTTTTGCCATCAATTAGTCTTTGAATGTACTCAAACTACTTTGGGTTTACTGTTTTTAAAATTGAACTTGCTGCTTTATTATAAACTTGTTCAAGATGTAATGCTTAGATATGTACTTGCTATTTCTTTCAGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAGTAAGTGTTTCTTGGAATCCAATCCGCATTGTTTTAGTGTCTATTGTTATTTGTTCTAAGGTATTGATGAAATATTTGCTCTGATAGTACTAGTAGGCAACTTGTTGATTTAGTACACAAGGTCTAAAGTTTGCAAGCATGCTTAAAGCATATAGCCAATTAGCCATATCCTAATACCAATTTTGCAACCCTACCCGTTTCATTTCACTTTGCTTTTAGTATGAGAATACATGCCACTACATGATTGGTGATTCATATGTGGCTGAGAATGTCTTGACTGCATACATTTGTTTCATGTAAATATATTCCAAGCTCTATTTTTCTCGAATAGTCATATTTCTTGATATTTATTTGTCGAGGTCTGTTTTCTGTTGGTTTACAGACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGGTGACTCAGATATCATCAAGAGCATGCCCGACCACTAAATTTGCTGTACCTTTAGGGTGAATTTATTTGGTTTTCTTGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

mRNA sequence

CCCAACATAAACTCATTTCAGGCAGGTTTATTTTACGGGCTTTTACAATTCCATATTTATAAATAACCGTAAGTTCATCTCAAAAACCCTAATTGCTCAAGCCATCTCTAGTGTTGTTCATCTCTTTCTTGAAGCTCTCTCATCAACCTTCGCCGACGCCGCAATGGCCCCTTCCAAGAAGACGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

Coding sequence (CDS)

ATGGCCCCTTCCAAGAAGACGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

Protein sequence

MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAERSFEEPLFIGTFFKFIFSVLDILACRHIFGVLIS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14757.1Spo14757.1mRNA


Homology
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|902209349|gb|KNA16188.1| (hypothetical protein SOVF_091420, partial [Spinacia oleracea])

HSP 1 Score: 201.8 bits (512), Expect = 7.400e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 112
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|902197326|gb|KNA13384.1| (hypothetical protein SOVF_117400 [Spinacia oleracea])

HSP 1 Score: 201.8 bits (512), Expect = 7.400e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|731348503|ref|XP_010685518.1| (PREDICTED: 60S ribosomal protein L30 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 192.6 bits (488), Expect = 4.500e-46
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1  MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIE 98
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|502102290|ref|XP_004492027.1| (PREDICTED: 60S ribosomal protein L30 [Cicer arietinum])

HSP 1 Score: 189.9 bits (481), Expect = 2.900e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|356536572|ref|XP_003536811.1| (PREDICTED: 60S ribosomal protein L30-like [Glycine max])

HSP 1 Score: 189.9 bits (481), Expect = 2.900e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R367_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117400 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.100e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9J9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_091420 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.100e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 112
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171800 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.100e-46
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1  MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIE 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: I1L7D4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G257100 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.000e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PLT2_GLYSO (60S ribosomal protein L30 OS=Glycine soja GN=glysoja_034327 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.000e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.300e-47
Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.400e-46
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESIN+RLALVMKSGKFTLGYKTVL++LRS+K KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.700e-42
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.700e-42
Identity = 81/98 (82.65%), Postives = 93/98 (94.90%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+ ++INN+L LVMKSGK+TLGYKTVL+TLR+SKAKL+IISNNCPPLRKSEI
Sbjct: 1  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKV VHH++GNNVDLGTACGKY+RVCCLSIID
Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.100e-41
Identity = 81/98 (82.65%), Postives = 92/98 (93.88%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 171.4 bits (433), Expect = 3.800e-43
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 170.6 bits (431), Expect = 6.400e-43
Identity = 81/98 (82.65%), Postives = 92/98 (93.88%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 168.3 bits (425), Expect = 3.200e-42
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KK KK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVD 98
The following BLAST results are available for this feature:
BLAST of Spo14757.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209349|gb|KNA16188.1|7.4e-49100.hypothetical protein SOVF_0914... [more]
gi|902197326|gb|KNA13384.1|7.4e-49100.hypothetical protein SOVF_1174... [more]
gi|731348503|ref|XP_010685518.1|4.5e-4695.9PREDICTED: 60S ribosomal prote... [more]
gi|502102290|ref|XP_004492027.1|2.9e-4593.8PREDICTED: 60S ribosomal prote... [more]
gi|356536572|ref|XP_003536811.1|2.9e-4593.8PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R367_SPIOL5.1e-49100.Uncharacterized protein OS=Spi... [more]
A0A0K9R9J9_SPIOL5.1e-49100.Uncharacterized protein (Fragm... [more]
A0A0J8BU14_BETVU3.1e-4695.9Uncharacterized protein OS=Bet... [more]
I1L7D4_SOYBN2.0e-4593.8Uncharacterized protein OS=Gly... [more]
A0A0B2PLT2_GLYSO2.0e-4593.860S ribosomal protein L30 OS=G... [more]
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BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL30_LUPLU5.3e-4791.860S ribosomal protein L30 OS=L... [more]
RL30_EUPES3.4e-4689.960S ribosomal protein L30 OS=E... [more]
RL302_ARATH6.7e-4282.660S ribosomal protein L30-2 OS... [more]
RL30_ORYSJ6.7e-4282.660S ribosomal protein L30 OS=O... [more]
RL301_ARATH1.1e-4182.6Putative 60S ribosomal protein... [more]
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BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G77940.13.8e-4382.6Ribosomal protein L7Ae/L30e/S1... [more]
AT1G36240.16.4e-4382.6Ribosomal protein L7Ae/L30e/S1... [more]
AT3G18740.13.2e-4281.6Ribosomal protein L7Ae/L30e/S1... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000231Ribosomal protein L30ePANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 2..99
score: 1.2
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..102
score: 8.5
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0048481 plant ovule development
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016024 CDP-diacylglycerol biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0042742 defense response to bacterium
biological_process GO:0007049 cell cycle
biological_process GO:0001510 RNA methylation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0051301 cell division
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006414 translational elongation
biological_process GO:0009642 response to light intensity
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0019877 diaminopimelate biosynthetic process
biological_process GO:0010020 chloroplast fission
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006334 nucleosome assembly
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0000023 maltose metabolic process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000338 protein deneddylation
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0016556 mRNA modification
biological_process GO:0010468 regulation of gene expression
biological_process GO:0051604 protein maturation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0007017 microtubule-based process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016310 phosphorylation
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0034969 histone arginine methylation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0007275 multicellular organism development
biological_process GO:0006281 DNA repair
biological_process GO:1903047 mitotic cell cycle process
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009637 response to blue light
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0016458 gene silencing
biological_process GO:0006310 DNA recombination
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0048856 anatomical structure development
biological_process GO:0051258 protein polymerization
cellular_component GO:0042646 plastid nucleoid
cellular_component GO:0005634 nucleus
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0005622 intracellular
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005849 mRNA cleavage factor complex
cellular_component GO:0005618 cell wall
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005874 microtubule
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016301 kinase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase
molecular_function GO:0070402 NADPH binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003729 mRNA binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo130610.81Barchart | Table
Spo061010.80Barchart | Table
Spo137320.78Barchart | Table
Spo148840.77Barchart | Table
Spo029310.77Barchart | Table
Spo193050.75Barchart | Table
Spo244200.75Barchart | Table
Spo173740.75Barchart | Table
Spo057080.75Barchart | Table
Spo184070.74Barchart | Table
Spo171140.74Barchart | Table
Spo238290.74Barchart | Table
Spo152350.74Barchart | Table
Spo081650.73Barchart | Table
Spo233980.73Barchart | Table
Spo143230.73Barchart | Table
Spo044970.72Barchart | Table
Spo045380.72Barchart | Table
Spo250030.72Barchart | Table
Spo055550.72Barchart | Table
Spo170800.72Barchart | Table
Spo120710.72Barchart | Table
Spo254810.71Barchart | Table
Spo026010.71Barchart | Table
Spo212070.71Barchart | Table
Spo148580.71Barchart | Table
Spo161360.71Barchart | Table
Spo170650.71Barchart | Table
Spo247500.70Barchart | Table
Spo046220.70Barchart | Table
Spo224560.70Barchart | Table
Spo156310.70Barchart | Table
Spo030070.70Barchart | Table
Spo249150.69Barchart | Table
Spo059460.69Barchart | Table
Spo127640.69Barchart | Table
Spo128610.69Barchart | Table
Spo006160.69Barchart | Table
Spo192310.69Barchart | Table
Spo011300.69Barchart | Table
Spo082850.69Barchart | Table
Spo070750.68Barchart | Table
Spo187840.68Barchart | Table
Spo023300.68Barchart | Table
Spo156350.68Barchart | Table
Spo237130.68Barchart | Table
Spo106230.68Barchart | Table
Spo029920.68Barchart | Table
Spo205150.68Barchart | Table
Spo225780.68Barchart | Table
Spo127570.67Barchart | Table
Spo003420.67Barchart | Table
Spo006850.67Barchart | Table
Spo009210.67Barchart | Table
Spo012410.67Barchart | Table
Spo034130.67Barchart | Table
Spo045010.67Barchart | Table
Spo060970.67Barchart | Table
Spo076670.67Barchart | Table
Spo132410.67Barchart | Table
Spo194070.67Barchart | Table
Spo197990.67Barchart | Table
Spo257910.67Barchart | Table
Spo270400.67Barchart | Table
Spo205190.66Barchart | Table
Spo173730.66Barchart | Table
Spo232270.66Barchart | Table
Spo233470.66Barchart | Table
Spo171510.66Barchart | Table
Spo242740.66Barchart | Table
Spo128770.66Barchart | Table
Spo002210.66Barchart | Table
Spo009200.66Barchart | Table
Spo271000.66Barchart | Table
Spo206990.66Barchart | Table
Spo142550.66Barchart | Table
Spo157110.65Barchart | Table
Spo089980.65Barchart | Table
Spo262490.65Barchart | Table
Spo005040.65Barchart | Table
Spo176190.65Barchart | Table
Spo249050.65Barchart | Table