Spo14711 (gene)

Overview
NameSpo14711
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding family protein
Locationchr6 : 36093847 .. 36097841 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACAATTCACCAAGAACCCTAGAAATTTAGTAAATCCAGAGCTCCCCTTTCCCCCCAAAACAAAAATTAAATACTTGCCTGCTTTTGGGGTATTCTAAATTCTTAAGCTTTTTTCCCCTCACACTTTCATAACCCTTGATTTATAATGTTTTGTTTGATTATTTTGGATAGAAAATTATTTTGGATAGAAAATTAAGGAAATGAGAAAGGGGGGTTAAGCTTTTGCTTCTTCGTTGTCAAATTTTCACTTAACACCCAAATCTTTAGCTATAAAAGAAGAAGGAAAAAATATCAAGTGGGAATTTTCCATAATTTTGATGCTCAATTTGCAACATTTATTTTGTTCTATTTAGTGATGGCATAGGAATTATAATGATAATTGTGTTTTTTGTTTGTTTTTGGTGTGATCTCATAGATGTCACTTTCGAGGGAAGAAAGGTTAGTTGTTGATTGTTATGAACAATTTGGTGGTTGTACATCTTTTAGCAGCTATTCTTTTGAATGTTATACTTAATGTTGAATTCATTTCTTTGTTAATTTTTTGGTGGATGATGTGTGTTAGTAGGTCTCCTTCACCAGATGGTTCTGCCTCGCCTGGGATTAATCCCAGGCATCAACGATCGAGGTCGAGGTCAAGGTCACCACCTCCTGCACGTAGTCGATCTGGGTATATTCGTATTACTTGCCTATTCTTTTTATCATCCTAACATAACTAAAATATAGGACTTTTGTTTTATAGCTTGTTGTATTTTCTGAATGTTCTGGTCTTTTGGATTATGTTGTATTAGGAGTCCTGTAGATACATCCAATCCTGGAAACAATCTGTATGTGACTGGCTTATCCACAAGGGTGACTAACACTGATCTGGAGAAGTTCTTTAGCAAAGAAGGGAAGGTATGTACCTCTTTGGATATTGAAGTGTGCAGTTTTCGAGAAGATTATGATAATTGCTGAATAGCTTTTACTTGTCCATGAGATGGCTATCCTACTTGTAACAAGTTTGCTTTTTGTCTTTTTGAGCTTGCCAAATAACAACTGGTGTTATGTTGTTGAATGTGCGACCTTATGTCATTGTATGTCATTTGTAAGGAAGGAGGCAACTATGCATTATTTGATCCATATTTTCTTCCTTCCCTTCTCCTTTTTCCACCATTCTCCCTGCAGTTTTTGTTTAGATGAGCTCTGAGAGCAACTGAGAGGATGTGATATTAAATTATTAGGTGCTTCAGAACTGTTGAGAATGTGCTTTCTCTTGCCAAATTGAAATAAAGATTAAAATAAGGGCTTGGTTATATGGGTCTAAGTTTGTGTCAGGTACTTCTAATAAGTTCCAACTCTTCTAAAGAGTCTAGTAACATACTGATTATTTGGAACTTTTTGGTGCATATCCTCTATTAGTCTATAATTAGTTGTAAATCAGGATCCCCTATTTTCCGACCTCTTGAGTTATCCAGTACATTTTCTGTATAATTGGCTAATTGCTTTAAACATTTGAATACGAGTGAGCTAGAATTTCATTTGATAAGTGTCAACTAGCTATGAGTAAGTATTGACTACCAGAAGATATGCAGATGTCCATGTTTTTTTTCCTCTGTAAAACAAGAGAGGGTGTACACATGTTTTCACGTGCTTAGAACCTCTAGAGATCTAACCTGTAGCAGGTGAGTGAACAGCCATGAAATGTACTTATAGTATCTATTAAGTTCCAGGTTTTCTTTTTAAGCTCAAGGCAATAGTGTGTATTGAAATACTATCATCTTTTAAAGTTCCGTATAACATTTTGCCTTAATCTTTGAGTACCTTGGTATCCTTGAAAAACTTAATGTATCTCTTTTGTAGGTCCTCGAATGCTGTTTGGTTACTGATCCTCGTACCAAAGAATCTCGTGGCTTTGCATTTGTTACTATGGAAACTAGAGAACAAGCTGAAAGATGTATCAAATATTTGCATCGCTCTGTGCTTGAGGGCCGATTGGTCTCCGTAGAAAAGGTGTGTCTTCATTAGTGTGTCTTTGTCGATGAAGGCTGTTTGAATTTGGTGCTTTGCAGTTTTCCCCACGCATAAATTGTTTCTCTATTAGTTTTGGCAGCAGGCTGTGTCATTGTAGCTCCATCGAATTCAATCTATGCTCTTAACAGTTGACTTGTCCCTTCACGACATGAGCTCTTCATCGACATTGCTAATCGATTTGAACCGACTAATTGCAAGGGGTCTATGCCCTCAATACCATTTCTTCATCAGATAGCAGACACATCACCGATGTTTTAGACCTTTTATTTTCAAAAACCGTAAAATGGTAAACAATCCAGTAGTCTCATTTTATGGTATCTTACTTTTGGCTGTAGGTAGATGTTCTGTGTCTATTAAAAACAGAGACCTCTTAATTGAATTCCTTTTTTCCTGTTTAAATATACATTGCCAGAATTGTGGGAGGTGTAGGTGAATGAGTGGGTGATGCAGGGTTTGGTTACTCAGTCTAGTACTGTGAATAATTATATTCTAGGACTTGCATGCTCTGTAGCTTACCTTCTCATGAATGTGAAACAGCAGAAAAAGGAAGGTAATACAACATGATGCAACTTTTGAATCCTATTTGATGTGACAAAATTTCATCTGAATTTGTAGGCAAAACGGTCTCGTGGGAGGACACCAACTCCTGGTCGATACCAGGGTCTGAGGAAAGAACGGGGAGGACCAAGAGGAGGAGGTATGGACCTGTGATTATTCAAGTTATATTATGTCTTTCATAAAGAAAAAAAGTCATAGCCTTAGTAAACCTGTTATCAACCTGGCAAACAATACTTGAGACCGACACACTTGACACCTCAACGGACATGCATGATTAGTTCTGTGATTAGGAGTCTTGGTCTTTGTTTTGTGATCAGTACTGTGAAATGCTATTGAAAGATTAGTGCATTTATCAAAAAAACTGAATGTCCATTAGTACATATGAGGTCTCTTTACGGAAGTGGTTCCTTCCATATTGCTCAATACCAAATACCCAAATGACATGAACCTAGCAAGTGATGGCAATGAAGTTTCCATCCCTTGTTGATTTGTTCCATGAATCCATGATTCTAGAAATTTACTTAAAACAGAGCACCTTCTAAAAACATCAAGGTCTGTAAAAAATGATGGAAAATAATTCGTTGACAATCCAATTAGCATTGTATATAAATTAAGTTTTGGCAAGTGATGTAGAGAAAAGAGAAGCAACTAAGCAAGCATCCACTTAGTCACTGATGTATGCTGGTATCTGAAACTTCCTCAGGTCGAGGTCCTCGTAGACGGTCTCGCAGCTTTTCACCACCGCGACGACGGTATGATAGAGGTCATTATGAGAGAGATCCTTATCCACGTGATAGGCGAGGGAGATCACGCTCTCCTTATGGTAGGAGACCTGATGATTATCCAGACTCATACCGGAGGCGTAGGGAGCGGTCCGTGTCAGCTGGTCGTGGTGGCTACCCTTGAGAAGAAATAAGCCCCACTATCAAACGGGATTACCTAGTTTCACATGTGATTTACTTTCACTGTTGTTGTTGTACTTGATGCTTTGAGGTACATACTCCTTAGGTCTACCACACCGCAATGTGTTGCCGGGGACTTTATAATGTTGCGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTGTGTTAGAGCTTATAAGATTGACCTTTTGACAGAACTCGTGTATGTTCGCCGTGACTTGTATTAGGTTTGAAACTCCAGTACTCCAGTATTAGCTAGCGACTTTATCAATAACTGCGAAAATATTTCTGTTGAAGATTTCAGTTGATCTTTACGCTATTTGATGTTGGCTTGAGTTTTATACACACAAAATCAGGCCTCAACTGACGACCTCATTTTGCTTCCCCAAACAAAACATTTTAAGACAGGTAGTTGTTGAGACTTGAAATTGGTGTTTTTTTTGGGGTGGTGTAAGAGTAGTGCCAGAACGGGCCAGCCAACAAATGAT

mRNA sequence

ATGTCACAATTCACCAAGAACCCTAGAAATTTAGTAAATCCAGAGCTCCCCTTTCCCCCCAAAACAAAAATTAAATACTTGCCTGCTTTTGGGATGTCACTTTCGAGGGAAGAAAGTAGGTCTCCTTCACCAGATGGTTCTGCCTCGCCTGGGATTAATCCCAGGCATCAACGATCGAGGTCGAGGTCAAGGTCACCACCTCCTGCACGTAGTCGATCTGGGAGTCCTGTAGATACATCCAATCCTGGAAACAATCTGTATGTGACTGGCTTATCCACAAGGGTGACTAACACTGATCTGGAGAAGTTCTTTAGCAAAGAAGGGAAGGTCCTCGAATGCTGTTTGGTTACTGATCCTCGTACCAAAGAATCTCGTGGCTTTGCATTTGTTACTATGGAAACTAGAGAACAAGCTGAAAGATGTATCAAATATTTGCATCGCTCTGTGCTTGAGGGCCGATTGGTCTCCGTAGAAAAGGCAAAACGGTCTCGTGGGAGGACACCAACTCCTGGTCGATACCAGGGTCTGAGGAAAGAACGGGGAGGACCAAGAGGAGGAGGTCGAGGTCCTCGTAGACGGTCTCGCAGCTTTTCACCACCGCGACGACGGTATGATAGAGGTCATTATGAGAGAGATCCTTATCCACGTGATAGGCGAGGGAGATCACGCTCTCCTTATGGTAGGAGACCTGATGATTATCCAGACTCATACCGGAGGCGTAGGGAGCGGTCCGTGTCAGCTGGTCGTGGTGGCTACCCTTGAGAAGAAATAAGCCCCACTATCAAACGGGATTACCTAGTTTCACATGTGATTTACTTTCACTGTTGTTGTTGTACTTGATGCTTTGAGGTACATACTCCTTAGGTCTACCACACCGCAATGTGTTGCCGGGGACTTTATAATGTTGCGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTGTGTTAGAGCTTATAAGATTGACCTTTTGACAGAACTCGTGTATGTTCGCCGTGACTTGTATTAGGTTTGAAACTCCAGTACTCCAGTATTAGCTAGCGACTTTATCAATAACTGCGAAAATATTTCTGTTGAAGATTTCAGTTGATCTTTACGCTATTTGATGTTGGCTTGAGTTTTATACACACAAAATCAGGCCTCAACTGACGACCTCATTTTGCTTCCCCAAACAAAACATTTTAAGACAGGTAGTTGTTGAGACTTGAAATTGGTGTTTTTTTTGGGGTGGTGTAAGAGTAGTGCCAGAACGGGCCAGCCAACAAATGAT

Coding sequence (CDS)

ATGTCACAATTCACCAAGAACCCTAGAAATTTAGTAAATCCAGAGCTCCCCTTTCCCCCCAAAACAAAAATTAAATACTTGCCTGCTTTTGGGATGTCACTTTCGAGGGAAGAAAGTAGGTCTCCTTCACCAGATGGTTCTGCCTCGCCTGGGATTAATCCCAGGCATCAACGATCGAGGTCGAGGTCAAGGTCACCACCTCCTGCACGTAGTCGATCTGGGAGTCCTGTAGATACATCCAATCCTGGAAACAATCTGTATGTGACTGGCTTATCCACAAGGGTGACTAACACTGATCTGGAGAAGTTCTTTAGCAAAGAAGGGAAGGTCCTCGAATGCTGTTTGGTTACTGATCCTCGTACCAAAGAATCTCGTGGCTTTGCATTTGTTACTATGGAAACTAGAGAACAAGCTGAAAGATGTATCAAATATTTGCATCGCTCTGTGCTTGAGGGCCGATTGGTCTCCGTAGAAAAGGCAAAACGGTCTCGTGGGAGGACACCAACTCCTGGTCGATACCAGGGTCTGAGGAAAGAACGGGGAGGACCAAGAGGAGGAGGTCGAGGTCCTCGTAGACGGTCTCGCAGCTTTTCACCACCGCGACGACGGTATGATAGAGGTCATTATGAGAGAGATCCTTATCCACGTGATAGGCGAGGGAGATCACGCTCTCCTTATGGTAGGAGACCTGATGATTATCCAGACTCATACCGGAGGCGTAGGGAGCGGTCCGTGTCAGCTGGTCGTGGTGGCTACCCTTGA

Protein sequence

MSQFTKNPRNLVNPELPFPPKTKIKYLPAFGMSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYERDPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14711.1Spo14711.1mRNA


Homology
[Close]
BLAST of Spo14711.1 vs. NCBI nr
Match: gi|902197323|gb|KNA13381.1| (hypothetical protein SOVF_117380 isoform A [Spinacia oleracea])

HSP 1 Score: 429.9 bits (1104), Expect = 3.100e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL
Sbjct: 1   MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 60

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE
Sbjct: 61  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 120

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER
Sbjct: 121 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 180

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
           DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP
Sbjct: 181 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 222
[Close]
BLAST of Spo14711.1 vs. NCBI nr
Match: gi|731331045|ref|XP_010676454.1| (PREDICTED: serine/arginine-rich splicing factor SR45a-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 351.3 bits (900), Expect = 1.400e-93
Identity = 197/222 (88.74%), Postives = 204/222 (91.89%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           MS SR+E RSPSP+GSASP I  RHQRSRSR+RSPP  RSRSGSP D SNPGNNLYVTGL
Sbjct: 1   MSHSRDE-RSPSPNGSASPAI--RHQRSRSRTRSPP-RRSRSGSPEDASNPGNNLYVTGL 60

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVTN+DLEKF  KEGKVLECCLVTDPRTKESRGFAFVTMETRE AERCIKYL+R+VLE
Sbjct: 61  STRVTNSDLEKFCGKEGKVLECCLVTDPRTKESRGFAFVTMETREGAERCIKYLNRTVLE 120

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GRLV+VEKAKRSRGRTPTPGRYQGLRKERGGP  GGRG RRRSRSFS PRRRYDRGHY R
Sbjct: 121 GRLVTVEKAKRSRGRTPTPGRYQGLRKERGGP--GGRG-RRRSRSFS-PRRRYDRGHYGR 180

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
           DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERS SAGRGGYP
Sbjct: 181 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSFSAGRGGYP 214
[Close]
BLAST of Spo14711.1 vs. NCBI nr
Match: gi|870860765|gb|KMT12073.1| (hypothetical protein BVRB_5g100290 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 351.3 bits (900), Expect = 1.400e-93
Identity = 197/222 (88.74%), Postives = 204/222 (91.89%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           MS SR+E RSPSP+GSASP I  RHQRSRSR+RSPP  RSRSGSP D SNPGNNLYVTGL
Sbjct: 58  MSHSRDE-RSPSPNGSASPAI--RHQRSRSRTRSPP-RRSRSGSPEDASNPGNNLYVTGL 117

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVTN+DLEKF  KEGKVLECCLVTDPRTKESRGFAFVTMETRE AERCIKYL+R+VLE
Sbjct: 118 STRVTNSDLEKFCGKEGKVLECCLVTDPRTKESRGFAFVTMETREGAERCIKYLNRTVLE 177

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GRLV+VEKAKRSRGRTPTPGRYQGLRKERGGP  GGRG RRRSRSFS PRRRYDRGHY R
Sbjct: 178 GRLVTVEKAKRSRGRTPTPGRYQGLRKERGGP--GGRG-RRRSRSFS-PRRRYDRGHYGR 237

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
           DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERS SAGRGGYP
Sbjct: 238 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSFSAGRGGYP 271
[Close]
BLAST of Spo14711.1 vs. NCBI nr
Match: gi|694399831|ref|XP_009375024.1| (PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 253.1 bits (645), Expect = 5.300e-64
Identity = 152/217 (70.05%), Postives = 167/217 (76.96%), Query Frame = 1 

		  

Query: 38  ESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTN 97
           E RS SP  S SP +  R  RS SRSR    +RSRS   VD SNPGNNLYVTGLSTRVT+
Sbjct: 6   ERRSASPHNSPSP-VRGRRTRSLSRSRR---SRSRSHESVDASNPGNNLYVTGLSTRVTS 65

Query: 98  TDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSV 157
           TDLEKFF+K+GKVL+C LVTDPRT+ESRGF FVTMET E AERCIKYL RSVLEGRL++V
Sbjct: 66  TDLEKFFNKQGKVLDCHLVTDPRTRESRGFGFVTMETVEDAERCIKYLDRSVLEGRLITV 125

Query: 158 EKAKRSRGRTPTPGRYQGLRKERGGPRGGGRG-----PRRRSRSFSPPRRRYDRGHYERD 217
           EKAKR RGRTPTPGRYQGLR +RG  R   R       RRRSRS+SP R +      +RD
Sbjct: 126 EKAKRKRGRTPTPGRYQGLRDKRGRDRDRDRDRDRDHDRRRSRSYSPRRLQ------DRD 185

Query: 218 PYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGR 250
           PYPRDRRGRSRSPYGRR DD+ DSYRRRRERS+S  R
Sbjct: 186 PYPRDRRGRSRSPYGRRADDHSDSYRRRRERSLSGAR 212
[Close]
BLAST of Spo14711.1 vs. NCBI nr
Match: gi|694399827|ref|XP_009375022.1| (PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 250.0 bits (637), Expect = 4.500e-63
Identity = 151/219 (68.95%), Postives = 166/219 (75.80%), Query Frame = 1 

		  

Query: 38  ESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTN 97
           E RS SP  S SP +  R  RS SRSR    +RSRS   VD SNPGNNLYVTGLSTRVT+
Sbjct: 6   ERRSASPHNSPSP-VRGRRTRSLSRSRR---SRSRSHESVDASNPGNNLYVTGLSTRVTS 65

Query: 98  TDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSV 157
           TDLEKFF+K+GKVL+C LVTDPRT+ESRGF FVTMET E AERCIKYL RSVLEGRL++V
Sbjct: 66  TDLEKFFNKQGKVLDCHLVTDPRTRESRGFGFVTMETVEDAERCIKYLDRSVLEGRLITV 125

Query: 158 EKAKRSRGRTPTPGRYQGLRKERGGPRGGGRG-------PRRRSRSFSPPRRRYDRGHYE 217
           EKAKR RGRTPTPGRYQGLR +R   R   R         RRRSRS+SP R +      +
Sbjct: 126 EKAKRKRGRTPTPGRYQGLRDKRDAGRDRDRDRDRDRDHDRRRSRSYSPRRLQ------D 185

Query: 218 RDPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGR 250
           RDPYPRDRRGRSRSPYGRR DD+ DSYRRRRERS+S  R
Sbjct: 186 RDPYPRDRRGRSRSPYGRRADDHSDSYRRRRERSLSGAR 214
[Close]
BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1H7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117380 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.200e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL
Sbjct: 1   MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 60

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE
Sbjct: 61  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 120

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER
Sbjct: 121 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 180

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
           DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP
Sbjct: 181 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 222
[Close]
BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJ22_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g100290 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 9.900e-94
Identity = 197/222 (88.74%), Postives = 204/222 (91.89%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           MS SR+E RSPSP+GSASP I  RHQRSRSR+RSPP  RSRSGSP D SNPGNNLYVTGL
Sbjct: 58  MSHSRDE-RSPSPNGSASPAI--RHQRSRSRTRSPP-RRSRSGSPEDASNPGNNLYVTGL 117

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVTN+DLEKF  KEGKVLECCLVTDPRTKESRGFAFVTMETRE AERCIKYL+R+VLE
Sbjct: 118 STRVTNSDLEKFCGKEGKVLECCLVTDPRTKESRGFAFVTMETREGAERCIKYLNRTVLE 177

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GRLV+VEKAKRSRGRTPTPGRYQGLRKERGGP  GGRG RRRSRSFS PRRRYDRGHY R
Sbjct: 178 GRLVTVEKAKRSRGRTPTPGRYQGLRKERGGP--GGRG-RRRSRSFS-PRRRYDRGHYGR 237

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
           DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERS SAGRGGYP
Sbjct: 238 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSFSAGRGGYP 271
[Close]
BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Match: M5WAM3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011480mg PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.400e-62
Identity = 151/212 (71.23%), Postives = 166/212 (78.30%), Query Frame = 1 

		  

Query: 38  ESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTN 97
           E RS SP  S SP +  R  RS SRSR    +RSRS S VD SNPGNNLYVTGLSTRVT+
Sbjct: 6   ERRSASPHSSPSP-VRGRRSRSLSRSRR---SRSRSQS-VDASNPGNNLYVTGLSTRVTS 65

Query: 98  TDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSV 157
           +DLEKFF+KEGKVLEC LVTDPRT+ESRGF FVTMET E AERC+KYL+RSVLEGRLV+V
Sbjct: 66  SDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETVEDAERCVKYLNRSVLEGRLVTV 125

Query: 158 EKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYERDPYPRD 217
           EKAKR RGRTPTPGRYQGLR +R   R   R  RRRSRS+SP R        +RDPY RD
Sbjct: 126 EKAKRKRGRTPTPGRYQGLRDKRDAGRDHDR-DRRRSRSYSPRRLP------DRDPYSRD 185

Query: 218 RRGRSRSPYGRRPDDYPDSYRRRRERSVSAGR 250
           RRGRSRSPY RR D++ DSYRRRRERS+S GR
Sbjct: 186 RRGRSRSPYSRRVDEHSDSYRRRRERSLSGGR 205
[Close]
BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Match: F6HUL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00090 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.400e-62
Identity = 150/219 (68.49%), Postives = 165/219 (75.34%), Query Frame = 1 

		  

Query: 38  ESRSPSPDGSASPGINPRHQRSRSRSRS---PPPARSRSGSPVDTSNPGNNLYVTGLSTR 97
           E RS SP  S SP I  R  RSRSRSRS      +RSRS   VD  NPGNNLYVTGLSTR
Sbjct: 6   EGRSVSPANSGSP-IRGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTR 65

Query: 98  VTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRL 157
           V  +DLEK+F+ EGKV+EC LVTDPRT+ESRGF FVTMET E A+RCIKYL+RSVLEGRL
Sbjct: 66  VNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRL 125

Query: 158 VSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYERDPY 217
           ++VEKAKR RGRTPTPGRY GLR+ R      GRG RRRSRS+SP  RR+     +RDPY
Sbjct: 126 ITVEKAKRRRGRTPTPGRYHGLRERR------GRGGRRRSRSYSP--RRWQ----DRDPY 185

Query: 218 PRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP 254
            RDRRGRSRSPYGRR DDY DS RRRRERS+S     YP
Sbjct: 186 ARDRRGRSRSPYGRRSDDYSDSNRRRRERSLSGAGRDYP 211
[Close]
BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Match: B9GWT8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13030g PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.700e-62
Identity = 151/218 (69.27%), Postives = 170/218 (77.98%), Query Frame = 1 

		  

Query: 32  MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL 91
           M+ SRE  RS SP  S SPG   R +RSRS SRS   +RSRS    D SNPGNNLYVTGL
Sbjct: 1   MAYSRE-GRSVSPRNSGSPG---RGRRSRSLSRSRR-SRSRSNDSGDASNPGNNLYVTGL 60

Query: 92  STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE 151
           STRVT++DLEK+FS EGKVLEC LVTDPRT+ESRGFAFVTMET E A RC+KYL+RSVLE
Sbjct: 61  STRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANRCVKYLNRSVLE 120

Query: 152 GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER 211
           GR+++VEKAKR RGRTPTPGRYQGLR +RG   G      RRSRS+SP  RR+D    +R
Sbjct: 121 GRVITVEKAKRKRGRTPTPGRYQGLRDKRGHGHG-----HRRSRSYSP--RRWD--DRDR 180

Query: 212 DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGR 250
           DPY RDRRGRSRSPY RR D Y DSY+RRR+RS+SA R
Sbjct: 181 DPYSRDRRGRSRSPYSRRGDGYYDSYKRRRDRSLSADR 204
[Close]
BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Match: SR45A_ARATH (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana GN=SR45A PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.600e-34
Identity = 113/232 (48.71%), Postives = 135/232 (58.19%), Query Frame = 1 

		  

Query: 36  REESRSP---SPDGSASPGINP---RHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVT 95
           R E+RSP   S     SP ++P   R  RS SRS S  P RS S    D  NPGN+LYVT
Sbjct: 24  RLENRSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSS---DAENPGNSLYVT 83

Query: 96  GLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSV 155
           GLS RVT  DLE  F+KEGKV +  LV DP T+ESRGF F++M++   A RCI+ L  SV
Sbjct: 84  GLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSV 143

Query: 156 LEGRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRR-------RSRSFSPPRR 215
           L+GR+++VEKA+R RGRTPTPG+Y GLR  RG  +     PRR       RSRS+S    
Sbjct: 144 LQGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSS--- 203

Query: 216 RYDRGHYERDPYPRDRRGRSRSPYGRRPDDY--------PDSYRRRRERSVS 247
             DRG      Y R  R  S SP+ RR   Y         D Y RRR+RS S
Sbjct: 204 --DRGRSYSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYS 247
[Close]
BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Match: YDC1_SCHPO (Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25G10.01 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.000e-14
Identity = 66/195 (33.85%), Postives = 99/195 (50.77%), Query Frame = 1 

		  

Query: 52  INPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTNTDLEKFFSKEGKVL 111
           ++P ++ +    + P  A      P  + N GN+L+V+G+++R+   +L++ FSK G V 
Sbjct: 75  VDPNNESTALDKKEPQSA------PEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVT 134

Query: 112 ECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSVEKAKRSRGRTPTPG 171
              ++ +P TK SRGF F++  T E+A   I  L+     GR+++V+KAKRSR  +PTPG
Sbjct: 135 HVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRSRPHSPTPG 194

Query: 172 RYQGL---RKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYERDPYPRDRRGRSRSPYGR 231
           +Y G    R  R  P     G  RR+        RY      R+ Y   R  R  SP   
Sbjct: 195 KYMGYDRRRNSRDFPSNNKDGGYRRNNYRDRDSNRY------RNSYRPSRPQREHSPGNY 254

Query: 232 RPDDYPDSYRRRRER 244
           R + Y    R RRER
Sbjct: 255 RKERYNVDSRPRRER 257
[Close]
BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Match: TRA2A_HUMAN (Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-13
Identity = 78/210 (37.14%), Postives = 98/210 (46.67%), Query Frame = 1 

		  

Query: 47  SASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTNTDLEKFFSK 106
           S S    P ++R RSRS SP   R R        +P   L V GLS   T  DL + FS+
Sbjct: 82  SRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSR 141

Query: 107 EGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSVEKAKRSRGR 166
            G +    +V D RT  SRGFAFV  E  + ++  ++  +   L+GR + V+ +   R  
Sbjct: 142 YGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 201

Query: 167 TPTPGRYQGLRKER------GGPRGGGRGPRRRSRSFSPPRRRYDRGHYERDPYPRDRRG 226
           TPTPG Y G           GG  GGG G RRR   +    R YDRG+   + Y    R 
Sbjct: 202 TPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYD---RGYDRGYDRYEDYDYRYRR 261

Query: 227 RSRSPYGRRPDDYPDSYR-RRRERSVSAGR 250
           RS SPY  R       YR R R RS S  R
Sbjct: 262 RSPSPYYSR-------YRSRSRSRSYSPRR 281
[Close]
BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Match: SAFB2_MOUSE (Scaffold attachment factor B2 OS=Mus musculus GN=Safb2 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.900e-13
Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 1 

		  

Query: 41  SPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGLSTRVTNTDL 100
           +P  + SAS G + +    +      P  +   G    +S  G NL+V+GLS+     DL
Sbjct: 410 APPKESSASEGADQKMSSVKEEQDIKPVIKDEKGRASCSS--GRNLWVSGLSSSTRAADL 469

Query: 101 EKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSVEKA 160
           +  FSK GKV+   +VT+ R+  +R + FVTM T ++A +CI +LHR+ L GR++SVEKA
Sbjct: 470 KSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKA 529

Query: 161 KRSRGRTPTPGRYQGLRKER 181
           K       +  R    +KE+
Sbjct: 530 KNEPSEKKSSDRRACDQKEK 547
[Close]
BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Match: TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.900e-13
Identity = 88/241 (36.51%), Postives = 110/241 (45.64%), Query Frame = 1 

		  

Query: 35  SREESRSPSPDGSASPGINPRHQ-RSRSRSRSPPPARSRS------------GSPVDT-- 94
           SR +SRS S   S S   + RH  RSRSRSRS   +RSRS             SP+ T  
Sbjct: 46  SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRR 105

Query: 95  ------SNPGNN--LYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVT 154
                 +NP  N  L V GLS   T  DL + FSK G + +  +V D +++ SRGFAFV 
Sbjct: 106 RHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVY 165

Query: 155 METREQAERCIKYLHRSVLEGRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPR 214
            E  + A+   +  +   L+GR + V+ +   R  TPTPG Y             GR   
Sbjct: 166 FENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYM------------GRPTY 225

Query: 215 RRSRSFSPPRRRYDRGHYERDPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGG 253
             SR      R YDRG+ +RD Y R  RG      G R     D   RRR  S    RGG
Sbjct: 226 GSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGG 274
[Close]
BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Match: AT1G07350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 147.1 bits (370), Expect = 1.400e-35
Identity = 113/232 (48.71%), Postives = 135/232 (58.19%), Query Frame = 1 

		  

Query: 36  REESRSP---SPDGSASPGINP---RHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVT 95
           R E+RSP   S     SP ++P   R  RS SRS S  P RS S    D  NPGN+LYVT
Sbjct: 24  RLENRSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSS---DAENPGNSLYVT 83

Query: 96  GLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSV 155
           GLS RVT  DLE  F+KEGKV +  LV DP T+ESRGF F++M++   A RCI+ L  SV
Sbjct: 84  GLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSV 143

Query: 156 LEGRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRR-------RSRSFSPPRR 215
           L+GR+++VEKA+R RGRTPTPG+Y GLR  RG  +     PRR       RSRS+S    
Sbjct: 144 LQGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSS--- 203

Query: 216 RYDRGHYERDPYPRDRRGRSRSPYGRRPDDY--------PDSYRRRRERSVS 247
             DRG      Y R  R  S SP+ RR   Y         D Y RRR+RS S
Sbjct: 204 --DRGRSYSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYS 247
[Close]
BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Match: AT4G35785.5 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.600e-26
Identity = 78/158 (49.37%), Postives = 91/158 (57.59%), Query Frame = 1 

		  

Query: 36  REESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGS---PVDTS------------ 95
           R +SRSPSP    +        RSRSRSRS P  RSRS S   PV  S            
Sbjct: 8   RRDSRSPSPRKERARS----RSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRGNLF 67

Query: 96  -------------------NPGNNLYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRT 155
                              NPG  LYVTGLSTRVT+ DLE  F+KEGKV  C LV +PRT
Sbjct: 68  FITCTLCRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRT 127

Query: 156 KESRGFAFVTMETREQAERCIKYLHRSVLEGRLVSVEK 160
           + SRGFAFVTM + + AERCIKYL++SVLEGR ++VE+
Sbjct: 128 RVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161
[Close]
BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Match: AT5G64200.1 (ortholog of human splicing factor SC35)

HSP 1 Score: 66.2 bits (160), Expect = 3.200e-11
Identity = 68/185 (36.76%), Postives = 93/185 (50.27%), Query Frame = 1 

		  

Query: 72  RSGSPVDTSNPGNNLYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVT 131
           RSG P D S+   +L V  ++ R T  DL   F+K GKV++  +  D RT +SRGFAFV 
Sbjct: 6   RSGPP-DISDT-YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVR 65

Query: 132 METREQAERCIKYLHRSVLEGRLVSVEKAKR-------SRGRTPTPGRYQGLRKERGGPR 191
            + +++A + ++ L   V++GR ++V+ AK        S+GR   P      R+ R    
Sbjct: 66  YKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKS--RRSRSRSP 125

Query: 192 GGGRGPRRRSRSFSPPRRRYDRGHYERDPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERS 250
              R PR   RS SPPRRR  R              RSRSP  R  DDY +   R+R RS
Sbjct: 126 RRSRSPR---RSRSPPRRRSPR--------------RSRSPRRRSRDDYREKDYRKRSRS 169
[Close]
BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Match: AT1G73530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 4.200e-11
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1 

		  

Query: 71  SRSGSPVDTSNPGNNLYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFV 130
           S S  P  +S P   LYV+GLS R T   L   F + G ++   +V D      +GFAF+
Sbjct: 64  SSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFL 123

Query: 131 TMETREQAERCIKYLHRSVLEGRLVSVEKAK 162
             ET E+A + I+ +H   L+GR++ VE+AK
Sbjct: 124 RYETEEEAMKAIQGMHGKFLDGRVIFVEEAK 154
[Close]
BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Match: AT3G46020.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.900e-9
Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 1 

		  

Query: 86  LYVTGLSTRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYL 145
           L+V+ LS   T+  L + FS  G++ E  L+ D  T+  +GF F+T ++ + A + +K L
Sbjct: 9   LFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSL 68

Query: 146 HRSVLEGRLVSVEKAKRS 164
              +++GRL+ VE AK +
Sbjct: 69  DGKIVDGRLIFVEVAKNA 86
The following BLAST results are available for this feature:
BLAST of Spo14711.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902197323|gb|KNA13381.1|3.1e-117100.hypothetical protein SOVF_1173... [more]
gi|731331045|ref|XP_010676454.1|1.4e-9388.7PREDICTED: serine/arginine-ric... [more]
gi|870860765|gb|KMT12073.1|1.4e-9388.7hypothetical protein BVRB_5g10... [more]
gi|694399831|ref|XP_009375024.1|5.3e-6470.0PREDICTED: serine/arginine-ric... [more]
gi|694399827|ref|XP_009375022.1|4.5e-6368.9PREDICTED: serine/arginine-ric... [more]
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BLAST of Spo14711.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R1H7_SPIOL2.2e-117100.Uncharacterized protein OS=Spi... [more]
A0A0J8CJ22_BETVU9.9e-9488.7Uncharacterized protein OS=Bet... [more]
M5WAM3_PRUPE3.4e-6271.2Uncharacterized protein OS=Pru... [more]
F6HUL8_VITVI3.4e-6268.4Putative uncharacterized prote... [more]
B9GWT8_POPTR7.7e-6269.2Uncharacterized protein OS=Pop... [more]
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BLAST of Spo14711.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SR45A_ARATH2.6e-3448.7Serine/arginine-rich splicing ... [more]
YDC1_SCHPO5.0e-1433.8Uncharacterized RNA-binding pr... [more]
TRA2A_HUMAN1.5e-1337.1Transformer-2 protein homolog ... [more]
SAFB2_MOUSE1.9e-1335.7Scaffold attachment factor B2 ... [more]
TRA2B_RAT1.9e-1336.5Transformer-2 protein homolog ... [more]
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BLAST of Spo14711.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G07350.11.4e-3548.7RNA-binding (RRM/RBD/RNP motif... [more]
AT4G35785.51.6e-2649.3RNA-binding (RRM/RBD/RNP motif... [more]
AT5G64200.13.2e-1136.7ortholog of human splicing fac... [more]
AT1G73530.14.2e-1138.4RNA-binding (RRM/RBD/RNP motif... [more]
AT3G46020.13.9e-934.6RNA-binding (RRM/RBD/RNP motif... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 86..154
score: 6.6
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 85..158
score: 6.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 84..162
score: 17
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 61..178
score: 1.4
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 79..191
score: 1.28
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 35..253
score: 7.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016246 RNA interference
biological_process GO:0007268 chemical synaptic transmission
biological_process GO:0009611 response to wounding
biological_process GO:0009744 response to sucrose
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0042742 defense response to bacterium
biological_process GO:0048825 cotyledon development
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006811 ion transport
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0035235 ionotropic glutamate receptor signaling pathway
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0009987 cellular process
biological_process GO:0007165 signal transduction
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000932 P-body
cellular_component GO:0000785 chromatin
cellular_component GO:0005829 cytosol
cellular_component GO:0000159 protein phosphatase type 2A complex
molecular_function GO:0004386 helicase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004970 ionotropic glutamate receptor activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression