Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTGAATATAATACTCATCTAAACATGAGTTGTTAACAAATTCATCAGTCATCACATTCTAATTCCAATTCCAATTCCAATTCCAAATCTGAATTAAATTATCCACCTACATTAATACACGTGTAAGGTACTCATTCTTTGACCGCGACACGCGTAAGATACCCATTTGTTTATTCCTCTTTAATTTTGGGTAGTACAAAAATTTCCAATAAAATGGGCAAAAGAAAGAAAAAGGGAGGGAACACAAATTTATACTATCCGTGAAACTTCCATCCTTTTCTAACATAGGATGATAGGAGTAGCAGTTAACGGCTAAACCCAATTCTCTACATTTTCTCTATTTAAACCTCATTCTTTTAACAAACATTGAATTCCCGATTTCTCTCTTTCATTACTCATTTTCCTCCCATCTTCTCTCTCCTTGTCTCTGCCTTTTCGTTGCCGACATTTCAGATCTGGTACGTGTTTCTCATTCTTGAATTCTTTGCCGTGATGTTTTTGTTTGTCTAAATTATTTACCAATTTTTTTGCCATGATTATAGTATATGGGATCATAACATAAGGGGTTTCTTTATTGGGATTTCATTTCAATTGTTGTTTGAGATTATAAATTAGTCTTTCATAAATGTATGTTGGATCTGGGAAGTTTTTGTTGTTGCTATTGAGCGTTTAAGTTTTAGAAGTCATATTTGTTGTATTTTTTGTGTGTGTGTGTGTGTCTAAAAAGCCTCATTCGAAGGCAAAAACTTGTATACAACATGTCGTAAATGGTGTTAACTTATGTTACTACCGGATAGGAAAATGCGTTGCTTTGTTTGTTCATGTTCCATTAATTATTTGCTGCCTTTTGCTGATGTTTCTTTGAGAAAAGACACCATTTTCCTGCTTTTTCCCAGAAACTATGTTGAAGTTGGAAATTTTTGGTACATTTGCAGATTTTAAGGAAGAATGGAATACGAATTAGACAACAGACACCAGCCTGCCAAATATGACTGCCTTTTATTTGGTAACATTTTTTTTATTCAATCATCAATATTCAATTGCTTTCTTGAATTAATAAATGAATGCTAATTGAAGTTTTGATTGATTTTTCAGATCTTGATGATACCCTTTATCCCCTAAGTTCTGGGATTGCTTCTCATTGTTCCAAAAATATTCAAGGTACTCTTTTCATGAATTATCGTTTAATTGATTTTCACCAATTGTTTATATTAGTCATTTATTAATGCTAAAATTAAAAAGTAAATAATAACATTATCTGTTTTATAATAATATTTCCAGAGTACATGATTCATCAGCTAGGAATAGAGGAAAGTAAAGTTCCTGACATGTGCTATGTTCTTTACAAGTATTATGGAACCACAATGGCTGGTCTTAGGGTATGGTAAAATACCTTTGTTTATTAAAGTTTTTTTTTTAGTTTTGAGTTTATCTTTTGCCATTTTAATAGCATTAAATTGAAATTTTCGTATCATCAGGCGATCGGGTATAACTTCGACTATGATCACTACCACAGGTACAACTTGACTAGTGTTGTAATATATTGCAATTATTTTATAAGACTGATTGTCTGAAAATAAGTTAATTTTGTGGTTTTCAGGTTGGTTCATGGAAAGTTACCTTATGATTTTCTAAAACCTGATCCAGTTTTGAGGAACTTATTACTCAGCCTCCCTATTCGCAAAATGGTAATTTCTTGTAGCTGAAGAAATAGGAATATGGAGCATTATATTATTGTTGAGATGTTTTAAATATGGTGTGTGTACAGATTTTCACAAATTCTGATGAACGTCATGCTGCGGAGGTTCTACGTAGGCTAGGTTTGGAGGATTGTTTCGAAAGGATAATCTGTTTTGAGACGCTTAATCCTAGTGAGAAGGGTAAAGTGGCAGTGAGTGGGGATGAAGAGAATGCTCCTGATGAAATTTTCGACATCATGGAATATCAACCTAGTTCTGGTGTGACTCTTCCACCAACACCAGTTGTCTGTAAACCCTTTGAAACAGCATTTGAACAATCCTTTAAGATAGCAGAAATTGACCCTAAAAGAACTGTAAGTTGCCCTTCTTTTATCTTATTCCTTTTGTGTTGTTTGAATAACAATAATGATGTTATTGCTGGGTGTCGCAGTTGTTCTTTGATGACAGTGTTCGCAATGTCAGTGCTGGTAAAAATCTGGGTCTTCATACTGTTTTGGTAAGCTAACCTTGTTTTCCATCTGAATATGGCAAATATGGCAAATGTGGCTAACTACTTTCTTATTTAAAGTTAAACTAATTTATGTTTGTTGTTTATAACTATAACTTACGCAGGTCGGTAAGTCTGAAAGATCAGCAGGAGCAGATTATGCCTTAGAAAGTATTCATAATATCAAAGAGGCCTTTCCGGAGCTGTTGGATGCTGAAGAGAGATTGGAGAATGTCGGTTATGCTCAGAAGATTGCAGTGGAGGCTTAATCTAACTTTTAGAATTAAAGATGATCTCCCTTGTTTCTGATTTAACTAATTGAAATGTCCCCAAAAAAAATAGGAAATAATGTGTGGATGTAGAATAGTTTCGAATTTGATGTCAATGTAAGCCTTTTGGCTGAATGTTTTATCCTAGTTTATTGGAATTGTATATTTGTCACATTTTGCATCTCATTCAATTTCGTAACATATCTTTATATTACTTACCAAGGTCTAAACAAGTAACGGTTTATGAATCAAGTAACGGTTTATGAATCGAGTGTACCATCTCACCCAAATTCATTCAATCAAATGTTTTATCTTCGAATTGATGAACACAAGATGAATGCGAAATAGGACATGAGTTCAGAGATGCATTTGACAGCGACG ACTTGAATATAATACTCATCTAAACATGAGTTGTTAACAAATTCATCAGTCATCACATTCTAATTCCAATTCCAATTCCAATTCCAAATCTGAATTAAATTATCCACCTACATTAATACACGTGTAAGGTACTCATTCTTTGACCGCGACACGCGTAAGATACCCATTTGTTTATTCCTCTTTAATTTTGGGTAGTACAAAAATTTCCAATAAAATGGGCAAAAGAAAGAAAAAGGGAGGGAACACAAATTTATACTATCCGTGAAACTTCCATCCTTTTCTAACATAGGATGATAGGAGTAGCAGTTAACGGCTAAACCCAATTCTCTACATTTTCTCTATTTAAACCTCATTCTTTTAACAAACATTGAATTCCCGATTTCTCTCTTTCATTACTCATTTTCCTCCCATCTTCTCTCTCCTTGTCTCTGCCTTTTCGTTGCCGACATTTCAGATCTGATTTTAAGGAAGAATGGAATACGAATTAGACAACAGACACCAGCCTGCCAAATATGACTGCCTTTTATTTGATCTTGATGATACCCTTTATCCCCTAAGTTCTGGGATTGCTTCTCATTGTTCCAAAAATATTCAAGAGTACATGATTCATCAGCTAGGAATAGAGGAAAGTAAAGTTCCTGACATGTGCTATGTTCTTTACAAGTATTATGGAACCACAATGGCTGGTCTTAGGGCGATCGGGTATAACTTCGACTATGATCACTACCACAGGTTGGTTCATGGAAAGTTACCTTATGATTTTCTAAAACCTGATCCAGTTTTGAGGAACTTATTACTCAGCCTCCCTATTCGCAAAATGATTTTCACAAATTCTGATGAACGTCATGCTGCGGAGGTTCTACGTAGGCTAGGTTTGGAGGATTGTTTCGAAAGGATAATCTGTTTTGAGACGCTTAATCCTAGTGAGAAGGGTAAAGTGGCAGTGAGTGGGGATGAAGAGAATGCTCCTGATGAAATTTTCGACATCATGGAATATCAACCTAGTTCTGGTGTGACTCTTCCACCAACACCAGTTGTCTGTAAACCCTTTGAAACAGCATTTGAACAATCCTTTAAGATAGCAGAAATTGACCCTAAAAGAACTTTGTTCTTTGATGACAGTGTTCGCAATGTCAGTGCTGGTAAAAATCTGGGTCTTCATACTGTTTTGGTCGGTAAGTCTGAAAGATCAGCAGGAGCAGATTATGCCTTAGAAAGTATTCATAATATCAAAGAGGCCTTTCCGGAGCTGTTGGATGCTGAAGAGAGATTGGAGAATGTCGGTTATGCTCAGAAGATTGCAGTGGAGGCTTAATCTAACTTTTAGAATTAAAGATGATCTCCCTTGTTTCTGATTTAACTAATTGAAATGTCCCCAAAAAAAATAGGAAATAATGTGTGGATGTAGAATAGTTTCGAATTTGATGTCAATGTAAGCCTTTTGGCTGAATGTTTTATCCTAGTTTATTGGAATTGTATATTTGTCACATTTTGCATCTCATTCAATTTCGTAACATATCTTTATATTACTTACCAAGGTCTAAACAAGTAACGGTTTATGAATCAAGTAACGGTTTATGAATCGAGTGTACCATCTCACCCAAATTCATTCAATCAAATGTTTTATCTTCGAATTGATGAACACAAGATGAATGCGAAATAGGACATGAGTTCAGAGATGCATTTGACAGCGACG ATGGAATACGAATTAGACAACAGACACCAGCCTGCCAAATATGACTGCCTTTTATTTGATCTTGATGATACCCTTTATCCCCTAAGTTCTGGGATTGCTTCTCATTGTTCCAAAAATATTCAAGAGTACATGATTCATCAGCTAGGAATAGAGGAAAGTAAAGTTCCTGACATGTGCTATGTTCTTTACAAGTATTATGGAACCACAATGGCTGGTCTTAGGGCGATCGGGTATAACTTCGACTATGATCACTACCACAGGTTGGTTCATGGAAAGTTACCTTATGATTTTCTAAAACCTGATCCAGTTTTGAGGAACTTATTACTCAGCCTCCCTATTCGCAAAATGATTTTCACAAATTCTGATGAACGTCATGCTGCGGAGGTTCTACGTAGGCTAGGTTTGGAGGATTGTTTCGAAAGGATAATCTGTTTTGAGACGCTTAATCCTAGTGAGAAGGGTAAAGTGGCAGTGAGTGGGGATGAAGAGAATGCTCCTGATGAAATTTTCGACATCATGGAATATCAACCTAGTTCTGGTGTGACTCTTCCACCAACACCAGTTGTCTGTAAACCCTTTGAAACAGCATTTGAACAATCCTTTAAGATAGCAGAAATTGACCCTAAAAGAACTTTGTTCTTTGATGACAGTGTTCGCAATGTCAGTGCTGGTAAAAATCTGGGTCTTCATACTGTTTTGGTCGGTAAGTCTGAAAGATCAGCAGGAGCAGATTATGCCTTAGAAAGTATTCATAATATCAAAGAGGCCTTTCCGGAGCTGTTGGATGCTGAAGAGAGATTGGAGAATGTCGGTTATGCTCAGAAGATTGCAGTGGAGGCTTAA MEYELDNRHQPAKYDCLLFDLDDTLYPLSSGIASHCSKNIQEYMIHQLGIEESKVPDMCYVLYKYYGTTMAGLRAIGYNFDYDHYHRLVHGKLPYDFLKPDPVLRNLLLSLPIRKMIFTNSDERHAAEVLRRLGLEDCFERIICFETLNPSEKGKVAVSGDEENAPDEIFDIMEYQPSSGVTLPPTPVVCKPFETAFEQSFKIAEIDPKRTLFFDDSVRNVSAGKNLGLHTVLVGKSERSAGADYALESIHNIKEAFPELLDAEERLENVGYAQKIAVEA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14638.1 vs. NCBI nr
Match: gi|902232936|gb|KNA22854.1| (hypothetical protein SOVF_030060 [Spinacia oleracea]) HSP 1 Score: 573.9 bits (1478), Expect = 1.500e-160 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo14638.1 vs. NCBI nr
Match: gi|731348905|ref|XP_010685725.1| (PREDICTED: suppressor of disruption of TFIIS-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 481.1 bits (1237), Expect = 1.300e-132 Identity = 243/296 (82.09%), Postives = 260/296 (87.84%), Query Frame = 1
BLAST of Spo14638.1 vs. NCBI nr
Match: gi|720020862|ref|XP_010262543.1| (PREDICTED: uncharacterized protein LOC104601051 [Nelumbo nucifera]) HSP 1 Score: 377.1 bits (967), Expect = 2.700e-101 Identity = 189/293 (64.51%), Postives = 229/293 (78.16%), Query Frame = 1
BLAST of Spo14638.1 vs. NCBI nr
Match: gi|590589164|ref|XP_007016371.1| (Haloacid dehalogenase-like hydrolase superfamily protein [Theobroma cacao]) HSP 1 Score: 375.9 bits (964), Expect = 6.000e-101 Identity = 183/282 (64.89%), Postives = 223/282 (79.08%), Query Frame = 1
BLAST of Spo14638.1 vs. NCBI nr
Match: gi|720003134|ref|XP_010256890.1| (PREDICTED: uncharacterized protein LOC104597165 [Nelumbo nucifera]) HSP 1 Score: 375.6 bits (963), Expect = 7.800e-101 Identity = 190/293 (64.85%), Postives = 230/293 (78.50%), Query Frame = 1
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVA9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_030060 PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 1.000e-160 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYZ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g173580 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 9.200e-133 Identity = 243/296 (82.09%), Postives = 260/296 (87.84%), Query Frame = 1
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Match: A0A061GVU9_THECC (Haloacid dehalogenase-like hydrolase superfamily protein OS=Theobroma cacao GN=TCM_041806 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.200e-101 Identity = 183/282 (64.89%), Postives = 223/282 (79.08%), Query Frame = 1
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UNK8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g191100 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.500e-100 Identity = 179/270 (66.30%), Postives = 219/270 (81.11%), Query Frame = 1
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SGG2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G048600 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.500e-100 Identity = 179/270 (66.30%), Postives = 219/270 (81.11%), Query Frame = 1
BLAST of Spo14638.1 vs. ExPASy Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.800e-12 Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 1
BLAST of Spo14638.1 vs. ExPASy Swiss-Prot
Match: SDT1_YEAST (Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.500e-11 Identity = 65/222 (29.28%), Postives = 96/222 (43.24%), Query Frame = 1
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Match: AT5G59480.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 346.7 bits (888), Expect = 1.400e-95 Identity = 167/271 (61.62%), Postives = 208/271 (76.75%), Query Frame = 1
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Match: AT5G02230.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 336.7 bits (862), Expect = 1.400e-92 Identity = 172/281 (61.21%), Postives = 214/281 (76.16%), Query Frame = 1
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Match: AT5G59490.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 313.9 bits (803), Expect = 9.800e-86 Identity = 158/275 (57.45%), Postives = 199/275 (72.36%), Query Frame = 1
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Match: AT3G62040.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 284.6 bits (727), Expect = 6.400e-77 Identity = 144/262 (54.96%), Postives = 179/262 (68.32%), Query Frame = 1
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Match: AT2G32150.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 236.1 bits (601), Expect = 2.600e-62 Identity = 114/246 (46.34%), Postives = 163/246 (66.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo14638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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