Spo14523 (gene)

Overview
NameSpo14523
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionStructural constituent of ribosome protein
LocationSpoScf_02052 : 91316 .. 95788 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAATTGAGTTGTGATTTTGCGAATGGTACCACGTTTGTCGTTTTCTGCACTCAAGTATATTTAAATCGTTTATAATAATTGGTTGGCTACAGTTGATTCACCCGCCATAATCAGATCATTATGTTTATCTTCTCCAACGGTCCATTCCCGCCAACAATAACTTCCAAAATTTTCGTGGGGCCCATCACAGATTTTTCCTCCTTCAATCATAGACTTCGATATTTCTTTCACTTTTCTCAATTCTTCATTTCCAAATCCAAAAACTTTATTAAAAAAAAAATCGAATGGGTTTTGCTATGATCAACTCATCAACTTCTTTACATCCATGTTTTTCATCACCCATAATAAAAAAGACAAATTACGCACCTAGATTTACGAAACGATTCGATTTTTCTCGCTCTCGAATCGTTTCTTTGAGCTCAGCATCTTCAGCAACGCCGCCATCTCCCAGTGAATCGGTTACCCCACTTGTCGGAAATTCCCCCAATTCATCAAACCCTAATCTAAGTAACTCTGCTAATGGGAGCCCTTTTGTTAAATTTGTTCAATCCGCTGAGTCTACTATTGAAAGGGTAAATCTTTTGATCTTATTGTGGTGTTTTAGGGTTAATTAAGTGTTGGGGTTAATTTAATTTCTCTGTTTTTCTTGTTAATTGCAATGGGGAATGTGCACACGTGCAGCTGTGAAACTGAAATTAGTGTCATTCGATGTTATTGTGTTAGAAGTTAGTGAAATTTGGTGAGAAATTGAAGGTGGGAGTGTTGGTGAGGATAATTTTCAAGTGTTGCCATTAATCAGTTACTAATCATTTCTAAATTTGGTAATGGTAAGGCCCTCTTGCAGGGTTCTTAATACAACCTCTCCCGGTCCTCTGAGGAGCTCTAAACTCGTACAACCTGAACTCCTTATGCTTAATCATGTTTAGACGATTTCAGCTTTGTTTGTTACAGACAGCATAGTTTGACAATTTTTTCATTGCAAGAATGAAGCTGCTTATGTGTTAATCATGTGATATCAGTTTTTGAGGTCATCCTCACTATTTCTCAAATCCTTGCTGTTTTCTTTGCAGATTATATTCGACTTCCGGTTCTTGGCACTTCTTGCTGTTGGAGGGTCACTAGCTGGTTCAGTGCTATGTTTCATGAATGTAATTTTCTGTCTACCCTTGGTATACATTGCAGTATCATGTACTCATGTAATATCTTTATTCAGTAAATTGAGCTTTGTGAGCAATATCACAAACTCGTTCTATGAGATGAAATATGAGACATAGGTTACATTTGATGTCTGCAGGGTTGTGTATATGTTGCTGACGCGTATAGAATTTATTGGACATCCTGTCTCAAAGGAAATCACAGTGGAAATATGGTCCTCCGGTTGGTGGAAGCTATTGGTGAGAATTCTTTCCCTCTCCATTCTCCATGTCATTTTGCTTAAACCTTAAAAAAAGTTACTTAAACTGAATCGTTTTCTCTGCATACTGATCTTGTTTCTTGTCCTTTATTTCCTCAAAGTTTGAGGAGGGCAAGCAAGATTGACCTGTTTAGATCATAAAGTGTATCCTTGTTTTGATGAAATTTGTTGGTATGCAGATGTGTATCTTGCCGGAACTGTTATGTTGGTATTTGCTATGGGTTTGTATGGGTTATTCATCAGTAATTCCTCTGGCGATGTGCATCCAAGTTCTGATAGGGCCCTGAAGGGCTCATCCTTGTTTGGAATGTTCGCTCTGAAGGTGATTGCAGATTACACCAACTCTTTAACTTTTTTATGTTTCTTTCCGAAGTTACAATATATGGTGTTTACAAATTTCAGGAGAGGCCTAGGTGGATGAAAATTAGCTCCCTTGGCGAACTGAAAACAAAAGTGGGACACGTCATTGTGATGATTCTCATAGTAAAGATGTTCGAGAGGAGCAAGATGGTGACAATAGCCACTGGCATGGATCTGCTGAGTTATGCTGTCTGCATTTTCCTGTCGTCTGCTTCGTTGTATATCCTTCACAATCTGCACAAGTCAGATGAAAACGGCCATCATGTCCCTTCTTAACGGATCGATCATCTTTCTCAAACTCCAGTATCAAGATCAAAAAGATCAAAAAGGAAAAGGGGGTAACAAAATGCGTCTGCCGGGAGTCGAACCCGGGTCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAGACGCTTGTTGTTGTTGACAAATATTACATACTATATCATTTCTTACGAGGGAATAAGTTGTTTAGATTGTCTTTCCAGCTGGAATGTTTTCTGAAGACATGTAAGTGCTTTTTTAATCAACTAGTGTTGCTTAGACCGCACGCTACGCGTGGGGTTTCGCAAGACAAAAATAAATTGTTAAATATATGAAGAATTTGTTGGAAATTCTCATTGGGAAACACAAAGGGAAAAAAGTGAGTGAAAATAAAAGAGTCCCACATGGAAAAAACTCTTCATATTCTCCTTGTTTATTAATTGGGGAATGAGTGTAACTCTTGTTTAAGAAAGCGTGAGAGTGGTATGGATAACATCACACACGCGCGCGCGCGCCGGGCCGGGCCCGGCCCGGGCCTCGGTACTCGGTACTCGGTACTCGGTACTTGGGAATGCGGGCGTGAGGTGGGTTTTGTGGGTCAACCCTATTCTTTTTGGTAACTGGACCGTTTTGGTTAAGTCATTGTTACGGGAATCTGTATTGATTACGTAACCGTTGGATTAATTACCATTAATTACGTCCGTTACTACATTCAATGTTTCTGACCGTTTTTTGCTGTTGCAATATTCATTCCCTCAGTCGTTTTTGTCTGTTGAGTTGCTCTCCTTCTGATTACTTAAATCAGAGTTTTAGTTTCCTTCAAACACTGAAAATCATTCACACAAATACGAAAACACATTCTTTCTCTCACAAAAAATTGCTCTCGGTTTTGGGCATACGTTCTGACTCCATCCGGCTTTGTGAGTGCACACAACGTCGGAGTTGCGCTAATCGTGAAGGGCGACCGCATTCTGTTCTACTGCACCGGGAGGTAGCGCGGAATCGTCTTTTAGGACAGTGGGTGTCCACGACGCAACAATTGTTCTTCGTTCAGTTCATCGAATCAGATAAGTTTGTTCTAATTTTTGGTTTAGTCGCAACAATCTAAAAGACGATTCTTATGGCTTTGACTTCGAAATTCATGATTCTTGATATGTCTAAGTTAGAACCTCTTGATGGCAAGAATTATAAACGTTGGGCTGTTAGGATGCGATTCTATTTAGAACAAATTGAGATTGCTTATGTGCTTGATGATGTTGTCGAACCTGATGATGAAACTGAATTGCATGCTTTTGAGTTGAAATTTGCTAAAGATGATAGGACATGTAAGGGCATGTTGCTGCATCATACGTCGAATGCATTGCTTGATATCTATATGGGGTTTGGTCATGCTAGGGATATTTGGGATGCATTAGAAAAGAAGTATGGAACTGATGATGCTGGTACTAAGCGTTATTGTGTCAGTAAGTGGTTAGGTTTTCAAGTTCAAGATGATAAACCAATTATTGATCAGATTCATGCTTATGAAAATATTTGCTTTGCTATGGCTGCCGAGGGTTTGGGTATTTGTGATATTACTCTTGCTATAGTTTTAACTGAGAAACTCCCACCCTCTTGGAAAGATTTTCGTAATCAGTTGATGCATAAAAAGAAGGACCTTACCTTAGAGGAGCTTGTAGGTCACCTGAAAATTGAGGAGGAAAATCGTATTAAGGATAAGGGTCAATCTGTGTTTTCCGGTTCCGCTAAGGCTAACCTTGTAGAACCTAAGCCTAATGCATATTCTGATAGGTTTAAGGGAAAGGGCAGTCCTTTCAAGCCTCAAGGGAAACCAATGAAGTATAAGTTCAAGGGGAAATGTTTTGAATGTGGGAAAACTGGTTACAAGTCTGTAGATTGCAGATCCAAGAAGAAGCCGGATCAGAACCAAGCCAACCTTGCTGAAGCTAATGAAGTTTCTAATCCTAACCATTTTATTGCTGTTGTTTCAGAAGCTAACTTGACAGGTAATGTTGCTGAATGGATCGTAAATACTGGAGCAACGAGACACATCTGCACCAACAAAGACATGTTCACTACCTACGAAAAAATTGATGGTGAAAATGTCTTCATGGGTAATTCATCTTCTGCAACTGTTCAAGGCAAAGGGAAGATCGTTCTCACTCTTACCTCTGGAAAACTTATTACTCTTACCAATGTGTTGCATGTTCCAGAAATGCGTAGGAACCTGATTTCTGGTAGCTTGCTAATGAAGGCTGGATTGAAGCTTTCATTTGATTCTGATAGGCTTGTTATTACTCACAATGGGGAGTTTGTGGGAAAGGGTTTCTGTAATGGGGGTTTATTTACTCTTGATGTCAAACTTGAAATTATGAATAAGAATGCTAGTACTTCTTCTGTTTATATTGCTGAGTCTATTGATTTATGG

mRNA sequence

TCAAATTGAGTTGTGATTTTGCGAATGGTACCACGTTTGTCGTTTTCTGCACTCAAGTATATTTAAATCGTTTATAATAATTGGTTGGCTACAGTTGATTCACCCGCCATAATCAGATCATTATGTTTATCTTCTCCAACGGTCCATTCCCGCCAACAATAACTTCCAAAATTTTCGTGGGGCCCATCACAGATTTTTCCTCCTTCAATCATAGACTTCGATATTTCTTTCACTTTTCTCAATTCTTCATTTCCAAATCCAAAAACTTTATTAAAAAAAAAATCGAATGGGTTTTGCTATGATCAACTCATCAACTTCTTTACATCCATGTTTTTCATCACCCATAATAAAAAAGACAAATTACGCACCTAGATTTACGAAACGATTCGATTTTTCTCGCTCTCGAATCGTTTCTTTGAGCTCAGCATCTTCAGCAACGCCGCCATCTCCCAGTGAATCGGTTACCCCACTTGTCGGAAATTCCCCCAATTCATCAAACCCTAATCTAAGTAACTCTGCTAATGGGAGCCCTTTTGTTAAATTTGTTCAATCCGCTGAGTCTACTATTGAAAGGATTATATTCGACTTCCGGTTCTTGGCACTTCTTGCTGTTGGAGGGTCACTAGCTGGTTCAGTGCTATGTTTCATGAATGGTTGTGTATATGTTGCTGACGCGTATAGAATTTATTGGACATCCTGTCTCAAAGGAAATCACAGTGGAAATATGGTCCTCCGGTTGGTGGAAGCTATTGATGTGTATCTTGCCGGAACTGTTATGTTGGTATTTGCTATGGGTTTGTATGGGTTATTCATCAGTAATTCCTCTGGCGATGTGCATCCAAGTTCTGATAGGGCCCTGAAGGGCTCATCCTTGTTTGGAATGTTCGCTCTGAAGGAGAGGCCTAGGTGGATGAAAATTAGCTCCCTTGGCGAACTGAAAACAAAAGTGGGACACGTCATTGTGATGATTCTCATAGTAAAGATGTTCGAGAGGAGCAAGATGGTGACAATAGCCACTGGCATGGATCTGCTGAGTTATGCTGTCTGCATTTTCCTGTCGTCTGCTTCGTTGTATATCCTTCACAATCTGCACAAGTCAGATGAAAACGGCCATCATGTCCCTTCTTAACGGATCGATCATCTTTCTCAAACTCCAGTATCAAGATCAAAAAGATCAAAAAGGAAAAGGGGGTAACAAAATGCGTCTGCCGGGAGTCGAACCCGGGTCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAGACGCTTGTTGTTGTTGACAAATATTACATACTATATCATTTCTTACGAGGGAATAAGTTGTTTAGATTGTCTTTCCAGCTGGAATGTTTTCTGAAGACATGTAAGTGCTTTTTTAATCAACTAGTGTTGCTTAGACCGCACGCTACGCGTGGGGTTTCGCAAGACAAAAATAAATTGTTAAATATATGAAGAATTTGTTGGAAATTCTCATTGGGAAACACAAAGGGAAAAAAGTGAGTGAAAATAAAAGAGTCCCACATGGAAAAAACTCTTCATATTCTCCTTGTTTATTAATTGGGGAATGAGTGTAACTCTTGTTTAAGAAAGCGTGAGAGTGGTATGGATAACATCACACACGCGCGCGCGCGCCGGGCCGGGCCCGGCCCGGGCCTCGGTACTCGGTACTCGGTACTCGGTACTTGGGAATGCGGGCGTGAGGTGGGTTTTGTGGGTCAACCCTATTCTTTTTGGTAACTGGACCGTTTTGGTTAAGTCATTGTTACGGGAATCTGTATTGATTACGTAACCGTTGGATTAATTACCATTAATTACGTCCGTTACTACATTCAATGTTTCTGACCGTTTTTTGCTGTTGCAATATTCATTCCCTCAGTCGTTTTTGTCTGTTGAGTTGCTCTCCTTCTGATTACTTAAATCAGAGTTTTAGTTTCCTTCAAACACTGAAAATCATTCACACAAATACGAAAACACATTCTTTCTCTCACAAAAAATTGCTCTCGGTTTTGGGCATACGTTCTGACTCCATCCGGCTTTGTGAGTGCACACAACGTCGGAGTTGCGCTAATCGTGAAGGGCGACCGCATTCTGTTCTACTGCACCGGGAGGTAGCGCGGAATCGTCTTTTAGGACAGTGGGTGTCCACGACGCAACAATTGTTCTTCGTTCAGTTCATCGAATCAGATAAGTTTGTTCTAATTTTTGGTTTAGTCGCAACAATCTAAAAGACGATTCTTATGGCTTTGACTTCGAAATTCATGATTCTTGATATGTCTAAGTTAGAACCTCTTGATGGCAAGAATTATAAACGTTGGGCTGTTAGGATGCGATTCTATTTAGAACAAATTGAGATTGCTTATGTGCTTGATGATGTTGTCGAACCTGATGATGAAACTGAATTGCATGCTTTTGAGTTGAAATTTGCTAAAGATGATAGGACATGTAAGGGCATGTTGCTGCATCATACGTCGAATGCATTGCTTGATATCTATATGGGGTTTGGTCATGCTAGGGATATTTGGGATGCATTAGAAAAGAAGTATGGAACTGATGATGCTGGTACTAAGCGTTATTGTGTCAGTAAGTGGTTAGGTTTTCAAGTTCAAGATGATAAACCAATTATTGATCAGATTCATGCTTATGAAAATATTTGCTTTGCTATGGCTGCCGAGGGTTTGGGTATTTGTGATATTACTCTTGCTATAGTTTTAACTGAGAAACTCCCACCCTCTTGGAAAGATTTTCGTAATCAGTTGATGCATAAAAAGAAGGACCTTACCTTAGAGGAGCTTGTAGGTCACCTGAAAATTGAGGAGGAAAATCGTATTAAGGATAAGGGTCAATCTGTGTTTTCCGGTTCCGCTAAGGCTAACCTTGTAGAACCTAAGCCTAATGCATATTCTGATAGGTTTAAGGGAAAGGGCAGTCCTTTCAAGCCTCAAGGGAAACCAATGAAGTATAAGTTCAAGGGGAAATGTTTTGAATGTGGGAAAACTGGTTACAAGTCTGTAGATTGCAGATCCAAGAAGAAGCCGGATCAGAACCAAGCCAACCTTGCTGAAGCTAATGAAGTTTCTAATCCTAACCATTTTATTGCTGTTGTTTCAGAAGCTAACTTGACAGGTAATGTTGCTGAATGGATCGTAAATACTGGAGCAACGAGACACATCTGCACCAACAAAGACATGTTCACTACCTACGAAAAAATTGATGGTGAAAATGTCTTCATGGGTAATTCATCTTCTGCAACTGTTCAAGGCAAAGGGAAGATCGTTCTCACTCTTACCTCTGGAAAACTTATTACTCTTACCAATGTGTTGCATGTTCCAGAAATGCGTAGGAACCTGATTTCTGGTAGCTTGCTAATGAAGGCTGGATTGAAGCTTTCATTTGATTCTGATAGGCTTGTTATTACTCACAATGGGGAGTTTGTGGGAAAGGGTTTCTGTAATGGGGGTTTATTTACTCTTGATGTCAAACTTGAAATTATGAATAAGAATGCTAGTACTTCTTCTGTTTATATTGCTGAGTCTATTGATTTATGG

Coding sequence (CDS)

ATGGGTTTTGCTATGATCAACTCATCAACTTCTTTACATCCATGTTTTTCATCACCCATAATAAAAAAGACAAATTACGCACCTAGATTTACGAAACGATTCGATTTTTCTCGCTCTCGAATCGTTTCTTTGAGCTCAGCATCTTCAGCAACGCCGCCATCTCCCAGTGAATCGGTTACCCCACTTGTCGGAAATTCCCCCAATTCATCAAACCCTAATCTAAGTAACTCTGCTAATGGGAGCCCTTTTGTTAAATTTGTTCAATCCGCTGAGTCTACTATTGAAAGGATTATATTCGACTTCCGGTTCTTGGCACTTCTTGCTGTTGGAGGGTCACTAGCTGGTTCAGTGCTATGTTTCATGAATGGTTGTGTATATGTTGCTGACGCGTATAGAATTTATTGGACATCCTGTCTCAAAGGAAATCACAGTGGAAATATGGTCCTCCGGTTGGTGGAAGCTATTGATGTGTATCTTGCCGGAACTGTTATGTTGGTATTTGCTATGGGTTTGTATGGGTTATTCATCAGTAATTCCTCTGGCGATGTGCATCCAAGTTCTGATAGGGCCCTGAAGGGCTCATCCTTGTTTGGAATGTTCGCTCTGAAGGAGAGGCCTAGGTGGATGAAAATTAGCTCCCTTGGCGAACTGAAAACAAAAGTGGGACACGTCATTGTGATGATTCTCATAGTAAAGATGTTCGAGAGGAGCAAGATGGTGACAATAGCCACTGGCATGGATCTGCTGAGTTATGCTGTCTGCATTTTCCTGTCGTCTGCTTCGTTGTATATCCTTCACAATCTGCACAAGTCAGATGAAAACGGCCATCATGTCCCTTCTTAA

Protein sequence

MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVTPLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSSASLYILHNLHKSDENGHHVPS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14523.1Spo14523.1mRNA


Homology
[Close]
BLAST of Spo14523.1 vs. NCBI nr
Match: gi|902171655|gb|KNA08026.1| (hypothetical protein SOVF_166330, partial [Spinacia oleracea])

HSP 1 Score: 438.7 bits (1127), Expect = 7.500e-120
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1 

		  

Query: 1   MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT 60
           MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT
Sbjct: 1   MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT 60

Query: 61  PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF 120
           PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF
Sbjct: 61  PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF 120

Query: 121 MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS 180
           MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS
Sbjct: 121 MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS 180

Query: 181 GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM 228
           GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM
Sbjct: 181 GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM 227
[Close]
BLAST of Spo14523.1 vs. NCBI nr
Match: gi|731316278|ref|XP_010694892.1| (PREDICTED: uncharacterized protein LOC104907628 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 391.0 bits (1003), Expect = 1.800e-105
Identity = 216/282 (76.60%), Postives = 237/282 (84.04%), Query Frame = 1 

		  

Query: 1   MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT 60
           M FA+I S++   P FSSPIIKKT +  +  KRF F RSRIVSLSS S  + P+ S    
Sbjct: 1   MNFALIPSASKF-PNFSSPIIKKTLHPSKIVKRFVFRRSRIVSLSSTSPDSIPTIS---- 60

Query: 61  PLVGNSPNSSNPNLSN----SANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGS 120
                +P+S NPN SN    S NG P  KFVQSAES+IERIIFDFRFLALLA+GGSLAGS
Sbjct: 61  -----TPDSQNPNFSNDPLASPNGKPLSKFVQSAESSIERIIFDFRFLALLAIGGSLAGS 120

Query: 121 VLCFMNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFI 180
           V+CFMNGCVYV DAY+IYWTSCLKG HSG MVLRLVEAID+YLAGTVMLVFAMGLYGLFI
Sbjct: 121 VICFMNGCVYVFDAYKIYWTSCLKGVHSGQMVLRLVEAIDIYLAGTVMLVFAMGLYGLFI 180

Query: 181 SNSSGDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFER 240
           +N+S +V+PS DRA+KGSSLFGMFALKERPRWMKISSL ELKTKVGHVIVMILIVKMFER
Sbjct: 181 TNTSANVNPSDDRAIKGSSLFGMFALKERPRWMKISSLDELKTKVGHVIVMILIVKMFER 240

Query: 241 SKMVTIATGMDLLSYAVCIFLSSASLYILHNLHKSDENGHHV 279
           SKMVTIATG+DLLSYAVCIFLSSASLYIL+ LHKSDENGH V
Sbjct: 241 SKMVTIATGLDLLSYAVCIFLSSASLYILNLLHKSDENGHDV 272
[Close]
BLAST of Spo14523.1 vs. NCBI nr
Match: gi|565357150|ref|XP_006345411.1| (PREDICTED: uncharacterized protein LOC102606402 [Solanum tuberosum])

HSP 1 Score: 337.0 bits (863), Expect = 3.100e-89
Identity = 185/253 (73.12%), Postives = 206/253 (81.42%), Query Frame = 1 

		  

Query: 33  RFDFSRSRIVSLSSAS---SATPPSPSESV----------TPLVGNSPNSSNPNLSNSAN 92
           R ++ R  I+  SS+S   S  PPS S S            P V +S    N  ++N  N
Sbjct: 22  RRNYRRLPIILASSSSAMPSHEPPSSSSSTEIGSILSSQKAPFVDSSKTPQNGYMANP-N 81

Query: 93  GSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCL 152
           G+PFVKFVQ  ESTIER IFDFRFLALLAVGGSLAGSVLCF+NGCVY+ DAY++YWTSC+
Sbjct: 82  GNPFVKFVQHTESTIERAIFDFRFLALLAVGGSLAGSVLCFLNGCVYIVDAYKVYWTSCV 141

Query: 153 KGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGM 212
           KG H+G MVLRLVEAIDVYLAGTVML+F MGLYGLFI+N S DVHP++DRALK SSLFGM
Sbjct: 142 KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFITNVSPDVHPTADRALKQSSLFGM 201

Query: 213 FALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSS 272
           FALKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG DLLSY+VCIFLSS
Sbjct: 202 FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGTDLLSYSVCIFLSS 261
[Close]
BLAST of Spo14523.1 vs. NCBI nr
Match: gi|723660013|ref|XP_010324717.1| (PREDICTED: uncharacterized protein LOC101255031 [Solanum lycopersicum])

HSP 1 Score: 333.6 bits (854), Expect = 3.400e-88
Identity = 187/256 (73.05%), Postives = 212/256 (82.81%), Query Frame = 1 

		  

Query: 31  TKRFDFSRSRIVSLSSASSATP---PSPSESVTPLVGN---SP-----NSSNPNLSN--- 90
           + R ++ R  I+ L+S+SSA P   PS S S +  +G+   SP     +SS P  +    
Sbjct: 17  SNRRNYRRLPII-LASSSSAMPSHEPSSSSSSSTEIGSILSSPKAPFVDSSKPPQNGYIA 76

Query: 91  SANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWT 150
           S NGSP VKFVQ  ESTIER IFDFRFLALLAVGGSLAGS+LCF+NGCVY+ DAY++YWT
Sbjct: 77  SPNGSPLVKFVQHTESTIERAIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDAYKVYWT 136

Query: 151 SCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSL 210
           SC+KG H+G MVLRLVEAIDVYLAGTVML+F MGLYGLFI+N S DVHP++DRALK SSL
Sbjct: 137 SCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFITNVSPDVHPTADRALKQSSL 196

Query: 211 FGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIF 270
           FGMFALKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG DLLSY+VCIF
Sbjct: 197 FGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGTDLLSYSVCIF 256

Query: 271 LSSASLYILHNLHKSD 273
           LSSASLYILHNLHKSD
Sbjct: 257 LSSASLYILHNLHKSD 271
[Close]
BLAST of Spo14523.1 vs. NCBI nr
Match: gi|970004101|ref|XP_015062836.1| (PREDICTED: uncharacterized protein LOC107008351 [Solanum pennellii])

HSP 1 Score: 332.4 bits (851), Expect = 7.600e-88
Identity = 186/256 (72.66%), Postives = 212/256 (82.81%), Query Frame = 1 

		  

Query: 31  TKRFDFSRSRIVSLSSASSATP---PSPSESVTPLVGN---SP-----NSSNPNLSN--- 90
           + R ++ R  I+ L+S+SSA P   PS S S +  +G+   SP     +SS P  +    
Sbjct: 17  SNRRNYRRLPII-LASSSSAMPSHEPSSSSSSSTEIGSILSSPKAPFVDSSKPPQNGYIA 76

Query: 91  SANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWT 150
           S NG+P VKFVQ  ESTIER IFDFRFLALLAVGGSLAGS+LCF+NGCVY+ DAY++YWT
Sbjct: 77  SPNGTPLVKFVQHTESTIERAIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDAYKVYWT 136

Query: 151 SCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSL 210
           SC+KG H+G MVLRLVEAIDVYLAGTVML+F MGLYGLFI+N S DVHP++DRALK SSL
Sbjct: 137 SCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFITNVSPDVHPTADRALKQSSL 196

Query: 211 FGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIF 270
           FGMFALKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG DLLSY+VCIF
Sbjct: 197 FGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGTDLLSYSVCIF 256

Query: 271 LSSASLYILHNLHKSD 273
           LSSASLYILHNLHKSD
Sbjct: 257 LSSASLYILHNLHKSD 271
[Close]
BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN53_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_166330 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.200e-120
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1 

		  

Query: 1   MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT 60
           MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT
Sbjct: 1   MGFAMINSSTSLHPCFSSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVT 60

Query: 61  PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF 120
           PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF
Sbjct: 61  PLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCF 120

Query: 121 MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS 180
           MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS
Sbjct: 121 MNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSS 180

Query: 181 GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM 228
           GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM
Sbjct: 181 GDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHVIVM 227
[Close]
BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Match: K4AYF8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.400e-88
Identity = 187/256 (73.05%), Postives = 212/256 (82.81%), Query Frame = 1 

		  

Query: 31  TKRFDFSRSRIVSLSSASSATP---PSPSESVTPLVGN---SP-----NSSNPNLSN--- 90
           + R ++ R  I+ L+S+SSA P   PS S S +  +G+   SP     +SS P  +    
Sbjct: 17  SNRRNYRRLPII-LASSSSAMPSHEPSSSSSSSTEIGSILSSPKAPFVDSSKPPQNGYIA 76

Query: 91  SANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWT 150
           S NGSP VKFVQ  ESTIER IFDFRFLALLAVGGSLAGS+LCF+NGCVY+ DAY++YWT
Sbjct: 77  SPNGSPLVKFVQHTESTIERAIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDAYKVYWT 136

Query: 151 SCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSL 210
           SC+KG H+G MVLRLVEAIDVYLAGTVML+F MGLYGLFI+N S DVHP++DRALK SSL
Sbjct: 137 SCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFITNVSPDVHPTADRALKQSSL 196

Query: 211 FGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIF 270
           FGMFALKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG DLLSY+VCIF
Sbjct: 197 FGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGTDLLSYSVCIF 256

Query: 271 LSSASLYILHNLHKSD 273
           LSSASLYILHNLHKSD
Sbjct: 257 LSSASLYILHNLHKSD 271
[Close]
BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HJT4_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.200e-87
Identity = 180/251 (71.71%), Postives = 203/251 (80.88%), Query Frame = 1 

		  

Query: 33  RFDFSRSRIVSLSSASSATPPSPSESVT-----------PLVGNSPNSSNPNLSNSANGS 92
           R ++ R  I+  SS+S+     PS S T           P V +S    N  ++N  NG+
Sbjct: 22  RRNYRRLPIILASSSSAMPSHEPSSSSTEIRSILSSPKAPFVDSSKPPQNGYMTNP-NGN 81

Query: 93  PFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCLKG 152
           P VKFVQ  ESTIER IFDFRFLALLAVGGSLAGS+LCF+NGCVY+ DAY++YWTSC+ G
Sbjct: 82  PLVKFVQHTESTIERAIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVNG 141

Query: 153 NHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGMFA 212
            H+G MVLRLVEAIDVYLAGTVML+F MGLYGLFI+N S DVHP++DRALK SSLFGMFA
Sbjct: 142 IHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFITNVSPDVHPTADRALKQSSLFGMFA 201

Query: 213 LKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSSAS 272
           LKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG DLLSY+VCIFLSSAS
Sbjct: 202 LKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGTDLLSYSVCIFLSSAS 261
[Close]
BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Match: A0A072UL21_MEDTR (Structural constituent of ribosome protein OS=Medicago truncatula GN=MTR_4g068770 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.800e-86
Identity = 176/257 (68.48%), Postives = 207/257 (80.54%), Query Frame = 1 

		  

Query: 17  SSPIIKKTNYAPRFTKRFDFSRSRIVSLSSASSATPPSPSESVTPLVGNSPNSSNPNLS- 76
           S+P     N +     R  F+++ + S SS S A  PSP +SV     + P     N + 
Sbjct: 12  STPYSLHINRSSHLPHRVSFTKASLSSSSSDSKA--PSPPQSVP----SRPTEPAFNYAF 71

Query: 77  NSANGSPFVKFVQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYW 136
           N+ NG+P V+ VQ+ ES+IER+IFDFRFLALLAVGGSLAGS+LCF+NGCVY+ +AY++YW
Sbjct: 72  NNTNGNPLVRMVQNTESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYW 131

Query: 137 TSCLKGNHSGNMVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSS 196
           TSC+KG H+G MVL LVEAIDVYLAGTVML+F MGLYGLFISN+  DV P+ DRALKGSS
Sbjct: 132 TSCVKGVHTGKMVLLLVEAIDVYLAGTVMLIFGMGLYGLFISNTPHDVQPAVDRALKGSS 191

Query: 197 LFGMFALKERPRWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCI 256
           LFGMFALKERP+WMKISSL ELKTKVGHVIVMIL+VKMFERSK+V IATG+DLLSY+VCI
Sbjct: 192 LFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKLVVIATGLDLLSYSVCI 251

Query: 257 FLSSASLYILHNLHKSD 273
           FLSSASLYILHNLHK D
Sbjct: 252 FLSSASLYILHNLHKQD 262
[Close]
BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Match: W9S9R5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007936 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.800e-86
Identity = 174/242 (71.90%), Postives = 202/242 (83.47%), Query Frame = 1 

		  

Query: 45  SSASSATPPSPSESVTPLVGNSPNSSNPNLSNS------------ANGS--PFVKFVQSA 104
           +S S ++ P  S+S  P + +S  SS+ + S+S            AN +  P V+FV+S 
Sbjct: 39  ASLSPSSSPRESQSTEPTIHSSSASSSSSSSSSTPQNDTSFGYAFANSAANPVVRFVRST 98

Query: 105 ESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCLKGNHSGNMVLR 164
           ES+IERIIFDFRFLALLAVGGSLAGS+LCF+NGC+Y+ DAY++YW+SC+KG H+GNMVLR
Sbjct: 99  ESSIERIIFDFRFLALLAVGGSLAGSLLCFLNGCIYIIDAYKVYWSSCVKGIHTGNMVLR 158

Query: 165 LVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGMFALKERPRWMK 224
           LVEAIDVYLAGTVML+F MGLYGLFISN   D HPS DRALKGSSLFGMFALKERP+WMK
Sbjct: 159 LVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDAHPSVDRALKGSSLFGMFALKERPKWMK 218

Query: 225 ISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSSASLYILHNLHK 273
           ISSL ELKTKVGHVIVMIL+VKMFERSKMVTIATG+DLL Y++CIFLSSASLYILHNLHK
Sbjct: 219 ISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLCYSICIFLSSASLYILHNLHK 278
[Close]
BLAST of Spo14523.1 vs. TAIR (Arabidopsis)
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 316.6 bits (810), Expect = 1.500e-86
Identity = 168/228 (73.68%), Postives = 193/228 (84.65%), Query Frame = 1 

		  

Query: 45  SSASSATPPSPSESVTPLVGNSPNSSNPNLSNSANGSPFVKFVQSAESTIERIIFDFRFL 104
           SSASS+ P S      P+ GN+  SS        + SPF +F +S ES +ERIIFDFRFL
Sbjct: 42  SSASSSIPTS-----IPVNGNTLPSS---YGTRKDDSPFAQFFRSTESNVERIIFDFRFL 101

Query: 105 ALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCLKGNHSGNMVLRLVEAIDVYLAGTVM 164
           ALLAVGGSLAGS+LCF+NGCVY+ +AY++YWT+C KG H+G MVLRLVEAIDVYLAGTVM
Sbjct: 102 ALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVM 161

Query: 165 LVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGMFALKERPRWMKISSLGELKTKVGHV 224
           L+F+MGLYGLFIS+S  DV P SDRAL+ SSLFGMFA+KERP+WMKISSL ELKTKVGHV
Sbjct: 162 LIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHV 221

Query: 225 IVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSSASLYILHNLHKSD 273
           IVMIL+VKMFERSKMVTIATG+DLLSY+VCIFLSSASLYILHNLHK +
Sbjct: 222 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHKGE 261
[Close]
BLAST of Spo14523.1 vs. TAIR (Arabidopsis)
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 164.1 bits (414), Expect = 1.300e-40
Identity = 105/245 (42.86%), Postives = 146/245 (59.59%), Query Frame = 1 

		  

Query: 32  KRFDFSRSRIVSLSSASSATPPSPS-----ESVTPLVGNSPNSSNPNLSNSANGSPFVKF 91
           KR   S  R + L S ++ T  S        S   L   S ++S    +++A  S     
Sbjct: 34  KRLVISSFRGLKLPSRTTKTITSSDWSWSYRSPGRLASASTSTSASTSTSAAVTSNSTNR 93

Query: 92  VQSAESTIERIIFDFRFLALLAVGGSLAGSVLCFMNGCVYVADAYRIYWTSCLKGNHSGN 151
            ++ E  IE++I+  RF+  L   GSL GSVLCF+ GC+YV D++  Y  +       G 
Sbjct: 94  FEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQYSVN------RGK 153

Query: 152 MVLRLVEAIDVYLAGTVMLVFAMGLYGLFISNSSGDVHPSSDRALKGSSLFGMFALKERP 211
           ++  LVEAID+YL GTVMLVF +GLY LFISN       + D     SSLFGMF LKERP
Sbjct: 154 VIFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERP 213

Query: 212 RWMKISSLGELKTKVGHVIVMILIVKMFERSKMVTIATGMDLLSYAVCIFLSSASLYILH 271
           +W+++ S+ ELKTK+GHVIVM+L++ +F++SK V I +  DLL  +V IF SSA L++L 
Sbjct: 214 QWLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLS 272
The following BLAST results are available for this feature:
BLAST of Spo14523.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902171655|gb|KNA08026.1|7.5e-120100.hypothetical protein SOVF_1663... [more]
gi|731316278|ref|XP_010694892.1|1.8e-10576.6PREDICTED: uncharacterized pro... [more]
gi|565357150|ref|XP_006345411.1|3.1e-8973.1PREDICTED: uncharacterized pro... [more]
gi|723660013|ref|XP_010324717.1|3.4e-8873.0PREDICTED: uncharacterized pro... [more]
gi|970004101|ref|XP_015062836.1|7.6e-8872.6PREDICTED: uncharacterized pro... [more]
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BLAST of Spo14523.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QN53_SPIOL5.2e-120100.Uncharacterized protein (Fragm... [more]
K4AYF8_SOLLC2.4e-8873.0Uncharacterized protein OS=Sol... [more]
A0A0V0HJT4_SOLCH1.2e-8771.7Putative ovule protein OS=Sola... [more]
A0A072UL21_MEDTR3.8e-8668.4Structural constituent of ribo... [more]
W9S9R5_9ROSA3.8e-8671.9Uncharacterized protein OS=Mor... [more]
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BLAST of Spo14523.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14523.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G13720.11.5e-8673.6Uncharacterised protein family... [more]
AT4G19390.11.3e-4042.8Uncharacterised protein family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005134Uncharacterised protein family UPF0114PFAMPF03350UPF0114coord: 98..236
score: 5.2
NoneNo IPR availablePANTHERPTHR31721FAMILY NOT NAMEDcoord: 38..278
score: 1.4E
NoneNo IPR availablePANTHERPTHR31721:SF1SUBFAMILY NOT NAMEDcoord: 38..278
score: 1.4E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0055122 response to very low light intensity stimulus
biological_process GO:0009657 plastid organization
biological_process GO:0055085 transmembrane transport
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008152 metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006457 protein folding
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006364 rRNA processing
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0044419 interspecies interaction between organisms
biological_process GO:0048481 plant ovule development
biological_process GO:0080022 primary root development
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0010431 seed maturation
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0016310 phosphorylation
biological_process GO:0006096 glycolytic process
biological_process GO:0030243 cellulose metabolic process
biological_process GO:0006810 transport
biological_process GO:0016049 cell growth
biological_process GO:0015976 carbon utilization
biological_process GO:0006396 RNA processing
biological_process GO:0006558 L-phenylalanine metabolic process
biological_process GO:0031167 rRNA methylation
biological_process GO:0009790 embryo development
biological_process GO:0005978 glycogen biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0008380 RNA splicing
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006412 translation
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009409 response to cold
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0015931 nucleobase-containing compound transport
biological_process GO:0006812 cation transport
biological_process GO:0006950 response to stress
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0009987 cellular process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006508 proteolysis
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0048440 carpel development
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0016441 posttranscriptional gene silencing
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:0016556 mRNA modification
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:1901642 nucleoside transmembrane transport
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0000373 Group II intron splicing
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0009611 response to wounding
biological_process GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis
biological_process GO:0006811 ion transport
biological_process GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0009414 response to water deprivation
biological_process GO:0009723 response to ethylene
biological_process GO:0010048 vernalization response
biological_process GO:0009733 response to auxin
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009295 nucleoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0009501 amyloplast
cellular_component GO:0005643 nuclear pore
cellular_component GO:0010319 stromule
cellular_component GO:0009536 plastid
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0010494 cytoplasmic stress granule
cellular_component GO:0005777 peroxisome
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0016020 membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0043169 cation binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004633 phosphopantothenoylcysteine decarboxylase activity
molecular_function GO:0004177 aminopeptidase activity
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0047980 hippurate hydrolase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0016629 12-oxophytodienoate reductase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0005515 protein binding
molecular_function GO:0015391 nucleobase:cation symporter activity
molecular_function GO:0004197 cysteine-type endopeptidase activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0047769 arogenate dehydratase activity
molecular_function GO:0004664 prephenate dehydratase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005337 nucleoside transmembrane transporter activity
molecular_function GO:0030955 potassium ion binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0033858 N-acetylgalactosamine kinase activity
molecular_function GO:0000774 adenyl-nucleotide exchange factor activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003844 1,4-alpha-glucan branching enzyme activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0003852 2-isopropylmalate synthase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016656 monodehydroascorbate reductase (NADH) activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004558 alpha-1,4-glucosidase activity
molecular_function GO:0004335 galactokinase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004743 pyruvate kinase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0032450 maltose alpha-glucosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo079280.79Barchart | Table
Spo129590.78Barchart | Table
Spo268570.77Barchart | Table
Spo013840.77Barchart | Table
Spo267360.75Barchart | Table
Spo106240.75Barchart | Table
Spo168920.75Barchart | Table
Spo107050.75Barchart | Table
Spo090930.75Barchart | Table
Spo263020.74Barchart | Table
Spo272100.74Barchart | Table
Spo051340.74Barchart | Table
Spo105860.73Barchart | Table
Spo268510.73Barchart | Table
Spo027060.73Barchart | Table
Spo098020.73Barchart | Table
Spo173050.73Barchart | Table
Spo219960.73Barchart | Table
Spo150150.72Barchart | Table
Spo258860.72Barchart | Table
Spo246900.72Barchart | Table
Spo227150.72Barchart | Table
Spo215310.72Barchart | Table
Spo192180.72Barchart | Table
Spo143530.72Barchart | Table
Spo236900.71Barchart | Table
Spo063990.71Barchart | Table
Spo195000.71Barchart | Table
Spo183040.71Barchart | Table
Spo256710.71Barchart | Table
Spo168840.71Barchart | Table
Spo256720.71Barchart | Table
Spo085990.71Barchart | Table
Spo127110.71Barchart | Table
Spo222530.71Barchart | Table
Spo038820.71Barchart | Table
Spo055470.71Barchart | Table
Spo005680.71Barchart | Table
Spo059690.71Barchart | Table
Spo206120.71Barchart | Table
Spo061850.71Barchart | Table
Spo244750.70Barchart | Table
Spo215420.70Barchart | Table
Spo138350.70Barchart | Table
Spo071200.70Barchart | Table
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