Spo14481 (gene) | SpinachBase

Overview


Name	Spo14481
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Exosome complex exonuclease RRP41
Location	chr5 : 29848238 .. 29869476 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTCTTATAGAAGCAAAGCTTGGCACAACGCCGCTGCGCAAGGTCACACTGTCACAGTGTCAAAAACTAGCAAAGCCCTGTTGCGAGAGAACAAGTGAGAAAACCATGTCTTCTAGAGCAGGAACGACGCCATCAACATACTCTCCTTCAACCCAAAAGAAGAAACCCCAAAAACCCACTTTCAATGACTCTAATGGAGTTCGTTCCGATGGTCGTGGCTTTTACCAGTGTAGACCTGCTTGTATGTTCTTTCTTTTCCCTCTTTCTACCCTTTTTAATTCACTATTTTGGCTTCTGCATTTTGTTTTTTTAATTGGTTTTCGCTTTTGATTCTAATTTTCCTCTCTTTTTGGTCATTTCATTGTTATTATCATATTGCATGTAGTGTTCTGTGTTCGTTTTGGCTGTTAATTTGTACTGGTTTGTTGGTTTTTCTTGGCAATTATTTCTGGGTTTCGCGGTGTGTTTTCCTATACATTAGAGTTTTTCCTGTGTGGAATGATGTGTACATTGTATAATTCTTTGGGGTGTAGGTTAAGAATGCGCTTAGATTATCGAAATTTACTCGCATTACTTCAATTCTAGTCAAGATACCTCGATTATGTTGAAGTTTGAACAACATAGTTGTAGATAAAAAAGGTAAACCAAACTGAAAGAGAAGAAAATATCATGTTATATATTTTCCCAGATGGGCTAAGTCGCCTGAAATATGAAAATCATGTTCAGAAGTCTTTCAAATTACAAACATGTTCGGCAGTGTTTCATGAATTCCATATCTTTGCACCCATATTTAATTCTAGAATGATGTACTGGTGTCAAAAATATTGAGCCTTGGCATGCCCCACCAATGGGATATGTATCCATAGCCAAAATTGTTACCGATGTATAGCTAACATGGTTTGCATGGAAAGTTGATTTTATGGTGGCTTAGTTGAAAAATCATGACTTGGTTTGTGGCATGGATAGTTATTGTCTCCCCACCTCAGAGCAACATGGGGATAGGGTGGTTAATTGGTTACACCTTTGGTCGTCTTTGGGTAGGGAGCAAGGCAGCAAGCACTGGTACCTTTATCATCATTCAGTTAGCAGAAGAACAATCAACACTCAAGAGTGTAAACAAATGACGTTACTTAACTAGCTTGCTCGGTTAACTCTCCTACCATTTTCCTCTGTTAATTTCCCCTTAAACAGACATCTTCTTAACAACTTGATATGGATTTTCTTTTCTTCTTAGCTCTCCAGTATCTTAACTGATTTGAGACATTAGTGGTGGAGTGGTGGATAAGAGCCTTAAGAGGGTGTATGAGATTGGATGCAGTAAATATACTTTAGGTGCAGTTATTTCTTCCTTGATTTAAAGTTTATGTTAAGGTATAGTTAGCCTTTAACTTCTTGAGTTGAGAACCTAATTGTGTCTTGTGATGGGCCAATGGATGTCTTTCATATGTAAGTGGAAGAAAATCTAGCAGACCTAATGAATTTCAAGAGTTTCAACCTAGCTTACCTGTCAAAACTGGACCTGTCTATACTGCCTGCATCGCCTGCATGATGCCATGATATAAAATTGTTGTACCTATACTTGATTAAATCGTTGAAGTGGTTTTTGTTATCCATGGTTTTGTGTAATTCATTTTGGCTTGGACTACTCTTGGTGCATCTTCATCGGCTAGCTCACTGTAGAATGTGTAGGAACTCGGACTTGCAAGAGATTCAACCTCGCCTCTCTAAAGTGGCTCCTACCTTCTATTTGGTGGGGAGGGCTAGGGGCAGTGTTACCTAATTCTCTAATCACCTCACGAATCGCGAACCAAAAGAGGAACTATAACATGAAAAAGGTACAATGTTGGTATAATTTAGCAAATTAGGTAGCGAATCAGGTAACAGTTGGTAGGGATTTTTATTTATGCAATTTTTTCTGTTCTAGTAGACCGGCTTCTTCCTTTGCACCACAAAATTGGTAAAGCATGGCTTGCTACACGCAATGAATAATAAGTAGATGATAGTGAAGAATGATTTTAGTCAAGTGTATTGTTTTGTAGTAAGTGTTTAAGTCTTTTGAGAAATGGGCATTGTCTTGTGGTACTTTGACGGTGTGATTAGGTATAGGGAAAGGTACACTTTCGGTAATACAAATAAGTTATACATTTTTAGCTTTGGGAGGAAGGCAGCTAGGGAATTATACATAGATTAGACCAGTTAGAGAGGAGGCATGAAGGAAATATTGATGTTTAGCTTTTGGTTAGAGGTTGTCTATCCACTTGAATGTCTGTGATTGTAGCCCCAATTTGATTATTAATTGCATGGAATAACAAACAACTAACAACTTTCCCCAAATTCTTTTCTATTTCCTCATTTCTGTCTTTCCAGTCTATTACAAATTGCTTATTTAACGCTTTCTTTATTTGCAGACTTGAAAACTGGTGCTGTCAGCGCTGCTGGTGGTTCTGCATATGCAGAATTTGGCAACACCAAAGTCATTGTGTCTGTGTGAGTATATCTATGCTTGCATATAGACTGCAATCTCCTTTTAAAACAAGGAGTTCTTTACAAAAGACATGATTCCAAATTAGACTACTTAGTGTTACACTGTTACTGTGTTAGATATTAGTTCCATGGATGTGTTCAAGTGTGATGTATGTTTGTTTTTACTTTCCCCATTGCCTTCTGTGCGTAGCTTTCGAAAACCTAGATTCCAGGGACGAAGCCAGAAACTCATTCCAATGGGGGCCGAATTTTACGCCATCAAAATTTTCAATTTTTTAGTTTAATCTATATTTTATTTTATTTTATTTTTGTTCTAAAAATATACTTGTATTCGTGTAAAGTAAGCTTAATGTTCTTTTAAAAAAGTAGCTCCATGAATAGTAACGACTGCAAACTTTGTACAATTTTAAGGATATTAAGTGTAAAATTATGAAGGGAAGTGAAAATGACAGCAGTTGCTAGGATTTGATCTCTAGATCTCCAGGCACTCAACAAGTCACAATGCATTCCCCTTTACAACTGAAGCAAGCTCATTTATTGATCAATGTATGGCAAAAATTAACTTTATACAAATTGTGACAGGGGCCAAGGCCCCCTTAGGCCCTACGGTAGCTTCACGCCTGCTATAAAGAGACTGGTCAAAAGGGAATGGTTCAGCTTTATGTTGCTTTTCAAAGAACTTGTTATATACATAATGTAGGATTTTTAAAAATGGAACTAAGTTAAGAAAAAGTATTTACTAGCTCCTGGGTTATGAAATATGGTAAGTTTTGGTAACTACAGTTGAATGAATTTTTGTTTCCTGTTTAAGGAGAGTGGAAAATGATCTGCTGCAATTGACAATGGATTTTACCAGGTTGGTATATATCCGCATGGTCATTGATTTGCAGAAGTGAACTGGTTCCCTTTGGAATGCCTAATAGTTTGTGTTAGTAAATGCAATTTGACACATTTCTAGTCAATACTGCAAACTGACACTAGCCTAGTTTCTGGTTTACCATTTCATTGGGTCCTGGGTCTCCTAGAGTCTTCTGTGCATGGTGAGAAACAATGAAATTTCTGCAGCTAATTGAACAGTTCTTCCCAGTTCCATGCATTGTGTAAGAAATCTCAGAATAAGTTGTGGAATCGCAAACAATTGATTTTGTTATTGGGACACAAAGGAACTTAGAATCACTTGCAAGGAGATGTGAGACTGGAGGTGTTCACTATAAGGTGTTGAGGGTTTAGAATCATATCAAATAAGATTGGTTTTTGGTAATTTGAAAAACATTCAGACTGTTAATAATGAAATTGTGCAATATACTCTGGAGTTATGTAAATTACCTAGGAAATTGCTACTGATAAGTTGGTTTCGTGCAGCATGATTTGAAGTTGATATATGGAGTGTTCCTTCTATGTGAGACATATGGAGTGTCAAATCTGGTGCAACAAACAAGTATAATAAAAGCAGATGATTTTTTATTGTTGTTTGAGACCTGGAGAAAATTGGTCTATTTCACTTATTCTACTGATTAGAGATAAAAAGTTGGGTTTCTAATATTGAGGTAAAGGTGTGGAACTTGTTTTGGCTGAAGTATTCTTTCTTGGGAAGTGCAGGTCAAGGGCTTCTGTTATACGGTGGCTGAAGTTGTCTGTCGTCCTTGTTTGTATAGTAAAACTATGATATTGGATTCTTTAAGATATTTAGGGGAGATAAGTTGTAGTACTAAAGTGTAAGTTAGAAGTCAAAAGATGGATGCAAGGTCCTACGGCGAAGAAGTGAGGTGAAGGAACCGTCAATACATAAAAGGTCGGAGCCTTATCTGGAAAATTTATGTTCTTAGTGAACACAAAGGATCAAAGTCAAATGAAAATGAAGGGTCTTTGTAAATAGGAAAGAGTGTCTATTTATTTTGGAGAAGCCAGGATGTATAACTACGGGAGACATATCTGCTCTTTTATGGGTTTACACTATAATATGCTTTTACCAACTCTATTCTGAGTGTAATTTAGCTGCATCATTTTCTTCTTTCTATTGTGCTTTAGACGCCGCACCAGGAGCAGGAAGGGGGGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTGGGAGCCAAAATTTTAGCCAACATCTTGATTTTCTAGATTCAATTTTTTGCTTTCAGAAAATATGCATCTTCAAGATTGGATTTCTTTCCACTTAGAATATCATGATTTTGACGGTTTTAGCACCTAATGTGAGTTGTTTAAGGTAGTTGATAAGATTTATTTTTTGAGCTCCTTTTCTCGTGGATTCTTAAACTTGTTACTTTTGCCATCTAAAACTTCATATAGTGAAATTTTTCCGGTGCAATGGTTGGTTTTAGCTATATTATAGTGCTATATTGCATTTTTATCCTTTAGAGTCATTATCATTATAGTCTATTTTAGTCATTGTCTTTGAACACAAATTTGTTTTAGTGTCTAACCTCATGTACTCATGTATACTGCCATACCCTATGCTTTTGATTGATACTGTGGAGCTAATGAGCTATCACTCTGTTTATGTTATTTTGCATGCGTTTTTAACTTTATTTTATTAGTGTGCCGCAAAAGCATTGCTGGTTTTCGTTGTTTTCAGTATATTAATACATGTATTTGTTGAGGCACTAACTTGCTCTAAATTGTAATGTTTATATGGTTATTTAACAGTGTGTTTGGGAACTCTAGTTTAATCAGGAAAAATGTGTAAAATTGTGGAAATAGGAGAATTCCTTAATTTTAGCTTATTTGATAATTTAAATGGAAAAGTGAATATGTGGAAATCTGTGGAAATCAACTAGTTATATTTTGCCTGATTTATTTTTCACACTTTTCCCCTCAAAAGTGATGGGAAAACTGTGGAAAACAAAATTAAATAAGTGAAAAATATGTGATATTCCAATTTCTCCAGCTTTCCGTAATAATTAGCCTAACAAATTAAAATTTAGAGATTTCTACATATTTCTTCAGATTTACTTTTCTACGGATTTCCATAGTTTAACTTTTCCTCACATTTCCAAGTTATTTTTGTTCCCAAACACCGTGTAAGTCACTATGCGATGGTGGAGTAGGAATAAGTGAATTCGCAGTTTACAGAAAATTCCATGTAACTTTTGTTTCAATGACAGAATGATGAAATACTTTTATAGAGCTTGAACTAGTTAGTTTCAAAGGTGATATGTACTTGGGCCTTGTCCAGTTCAACCTAAAAAACTAATACCCGTTTAAAAAATTAGCTTTAACCAATAAAATCAGTTTCAATAAGTAAAGTCAGTTTAATAATAATTGAAAATCAGTTTTGTTCAGTAAATATCAGTTTTTATTAGTGATGAGATTGGACGTGACCAGCCAAATCTTCTACTTCTCAAAAGAAGCCACTGTCTGCCTTGCATGACTGGATTCCTTCATTTATGCACACCCCTTGTGAGAATCACCCTTGTACCACTGGCCAAGCAAACAGCCACTGTTGTAGTACTAAATAGTATTTAATCAAATTCCAAAAGTTCTCAATAGTAAAACCCGAGTTTCTACCTATGTCATAGAGAGCTACCTATCAATCTAATTTTTTCTCGTTTTTCCAGTCGTTTGGTAGTCTACGATGAGTTGGATACAAATGCTATGGGCTCCTGTTATAATTAACATAATTACAACAGAAAATGTAGGAAGAAGAAAGACATTTGATTGATAGTAATGGAATTACAGAAAATAGATGATAGGGATCAAGCTTTTTGGTGGCCTTATTCACTCCCAAAAGCTAAACAAAGCTAAATCAACACATCAATATTCTGTATGCTTTTCTCTTTGCCTACTCTCCCTAATTTATAGTGGACTATCTTACCCCTCAAGCTGTCCTTCACCAACTGGTTATGCAAAAACTAAACTACCTGTTCCTATTAGGCTAGTTCATTATGACTCCACCCTAAGACACTAGGCTGTTCATCTTGCTTCAAATTTTACATAACTAATCTAGTGACAGCCCTTTAAATGAAGTGTTTCTTAAAATTTTCTAGTTTCCAAGGTATTCTAGTTGACTATAAACGTGAAGTAAATAGGCAACCTTTAAATGAATTTAGCCGGGTTAACTAACCTCCCCGTTTTGACAAGGGTTTTAGATTTCTGTCCTGCAAGTCCCTCTGGAACTTCTGGAAACTGGATTCCAAAAAAAGAAGTCAACTTGGCAGCCAAAGAATAAAATTGACCTTCAAAAAGTTTTGGATTTAAAATTAAGAAGACCTGAATATGGAAAACTTTACAGCCAAGGAACGGCTTCAGATTCCATACATTTGAAGGACCTGACCAGGGATCAACACCCACTTGTACAAAGTAAATCTTGAAACTGTCCATCAACATCAACTTCTTCTAATTATTTCTTAATATGTCGTTGCTCCTAAAAAACAGAAAATGCATATCTCAATCAGTTGGCCCAAGTTTCTCTCATTAGTTTCACATAAATTCAGATGAGTGATATCTCCTGTTGGTGACTGTTCTTATGCAGATGTTGGAGCCAATGCTTAACTTGCCTTTTTTATTGTAGCGTAGAAACCTACTGCCTCATCCACCAACATTCCTCAATAATCCTCGTTCACTAAGAAATAAAATCAAACCATGAAATTAGAAAGAATATACACTCCTTCAACCAAATTGGAAAGCGGACCTTCTGAAGGATATACATAAAAAACATCCCAGAAACGTGGTCACTAGCCTGACTTTCTTAGCCTGTTCTTCTAATAACACTGACAGATATACTTATATATGGCGGTCAGTAGAACTCTAAATGAAGAAAATTTTCTTTGAACAATCAATCTTAGCATGAGATGTCATATGTAATTTCATTCCTCCATTATTTTGGAAAGCCCATCTACTAAAGGTGACACCAAATCCTTACAAAATTGCAGTCGTAAGCCGATATTATTGTAGCAGAGACTCTAAATATGCCTGAAAAAGTATCCTGGAAAAGTATCTAATATGCCTTTCACAGAGGGTCAAATAATATTACAAAATATTATATTAGACATTATATGGAATATGGAAATAATCAAAATAAAAGTAAAAAAATGCTCATTAACTTAAGAAAAGAATCAATAATTAAAGTATATCAGTACTCTATTTTTAGTCATCTTAAAGAATAATAATTCATATAAATATTGCATCAGATATACAGAAAGAATTAAAATAAAATTCAAGTTTATTTAATTTCATTAGGAAACTTTTTATTATTATTTAAATAATAAATAAATGAATTTAATAGCATTCGTTCGTGCACGGGTTCTAAACTTGTACCGGAATAAACTTTAGAACCTCCAGTATCTTCTATAAAAGTTGATTGTGGTCCCGACTATGACCGGCATTCTATGAACAGTCCCTAATATGGATTATCCAAGCCTCCTAGGTTGGACTACGGTTTGAAATGCATTGGACTCTTGTAGGTAAATCCGTGTCACGTGATGGATATTTAATGGTCACATTTTTTTTGACTTTTCCTTTTTCTTCCTCTGTTACTCCTTTAATTAACCCACTTTTTTCTTTCTCCATCAAACCTCAATCAATTTCCTGAAAACAGAGTTGATGTACGCTCATGACTCATCGATCCCCTATTAGCAAAACCATTACAAATGCAAATATCATCCAGATTCTTCCTCTTTGAACGTTCTTGTTGGATCTGGTTTTGGTCAAGGGAACTGGGTTAACACCTCCCTTGGCTTCGCTTTTCTCCCGCTTCTTCCTCGAGGCACAAATATTTTGCAACTTGCAAGGGGAGATAGACTGCAGGGATTGGAGTACCATATAAAATATCGCGGATGCGGTCGCAATCGCGTTAACGGTTGTATTATCGCGGAAACCACTTGTAACGGAAAAATAGAACGGATCGCGGCTAACGCGGTATGAATCTCAAAAAAATCATATTACTAGGTTTATGCTTTGTTTATACCTTTTACGTTTAAAAGACATTATTTCAACACAACCTAACAAACCCTATTATAATGTGAGCAAGGGACATATTTTGTGAACAAATCATTCATTATCATTACCCCATTGTCTCAAAGAGGCTCCCGCAAGAAGCAGGGTAAGGGGGGGTCGGACGTACGCAATCTTGTTTTTAAAATACATAACTAACGACTAAAATATTTTTCTCCAATTTGTACAAAAAACGGTGTAACGTGAAAAAAAGCGTTCTAACGCGGCGAGTCACCGTTATGTAACGGGCGACGTGGGGAGAAAGATGTGATTTTTGTCGCACCGTTATATAACGAGGTGCGCGGAACGGTAAATCCTAAATCCGTTGTTACGTAACGACCGAGTTTTAATTCCATTGATTGGGCCAAGAAGTCGTTGTCGTCTTGCCATTGAAGAGTGTCAAAGTTTGCAATCACTTCGTCCATTTTAAGTGAAAAATCATTACCAGGCGATAAACTGGGGTCTAATGTGGAATGAAAAGGGTTCCATTGCACTCAATGCTTCTAGAATCTTGCAATGGTTGACGACGAAGTACATGAATTCGTGCATGTGGATAATATTTTTTAATTCAAATCAACAATTAGCAAACTGGAGTATATAAGAAAACTGGAGATTAAGGGGAGAGACAGCGAGGAAGGGAGAGACCTGATTGAGTCGGAAAGTGGTTGAATGAGTGGTGCGAGGACCTTTTACATAGCTATGGTAGTCCTAGATATGCAGAGCTGTGGAGGGAGGGAGAAAGAATTAAGGATGGGCATTAAGGGAGTCAACACAGTACAAGACAAAAGAAAAATTGTCATGTGTTAATGTGCCGTCACATGACACATGTTTACCTACAATAGCAGGTAAACCAGTTGACAACCCAAAGCCCTCCCCATCCAATGCACTTCCAACTATGGTCCAACCGAGGATTATCCATATTTGGGACTGTTTATAGAAGATCAGTCATAGCCGGAGACCATTTTTATCAAATTTTCCTTATCTTTTTTCTGTCTGTACTTTACATGCAGTTGTCCGGTGGATATCTGACGATATCATTGACAACAGCCTCCTTATAAATGCAGCATTTACTTTCCGCTTTCAGGATAACCTAAAGTCATTTAAAACACTGCTGCGCACGTGGCTTAAAAATGCAGTTTAAGCATTTACTTCTTGCAACTTCTTCCCATTTGCTCTTACTTATCATTTCAAACTTCATCTCTGTATGTATAATGTCTGAAATATTGGTAAGCTAATTGGATGATGTGTCTCCTGGTCTTTTTCCATGAAATTTTATGGAGATGACTTTGTAGCTTTGACTCTTCTAGTCTTCTCCTTTAAGTTCTAAAATGTGCAATACATATCTTGCATATGATCAGAATGAAATGTTTTTCTATGGTGGCTACATAAAGTAAATATGTTATATTCTTACTAGGATTGCTCAATGGCTGTCATTTCTAACATGATTTAGGGTTTTAAAATTGCTCAAGGCCAAGGGTTGTCATTTTAACATGGTTAACATTTCACTTTGATTCTTTTCTTGGTACTATCTTTGACATTCACTTCTTGTAATCTGGTGGTTGCATTTTTAATCTTTCTCTCACATTAACCATCTGAACTATTGGATACATCCTGTGGTTTGTAATTAAGAATCAAATTTACTATTCCCCAGATATGGGCAGAACAGTTTGAAACAAGAACAATGGTGACAACAAACCATTATCTATTGAATGTTACAACTCTAAAATCTGAACCGCTGGAGAGTCACCTTCTGGATACCGTATTGCTAACATCAAACAAATAGTAAAGCTTATTGTTATTAATCTCTATTCTATAAGGGAACTCCCCATGTTATTATGGTAAATGATATTTTAGTGCCCCCCTATAGAATAGTCTATTATACCCTCGTTCACAAGTGAATTAATAACAAACCTTACCCTAAATTAAATCAAGAGTAATTAAAATCATACTTGCCAATTTGGAAATAAATTAAATAAATTCAATCTAATCTTTATGATTATTGCAACACAACTTATGATTAAACTAAATTTGGGGATAACATCAATTAACCCATAATTCACGTCAATCACCTCTCAAGAAGCCAAAAATAAGTAGCATTTGTTTACTATATAAACTTAACCCCCTCCCCATCCTAATCACTCAAAACACAATATGGAGTATATGTTTCGCTCTCCCTTTATTTGATCTCTAATGTATGACCATGTTATACATTTACTTGATAGAATATTGAGCATATTATTAGTTGTAGTTGAATAGCTACTAATTATACAAATATAATATCATTTTTTTTTATAATTACGATCTTACAATCGTACATTTGGTGGATCTTAATCGATCATTTCATTTCAAAGTTTTCTAACCTATCTCTTTTATTGCTTAATATTTTCATAATTGTTTATTACTTTGTAATAACTAATCAAGTTAATTGTGATGAAATCTTGCAATGGGTGTTAAATCATTGATTAAGATACTTTCTGAAGAAAAAAAGAGGTAGTCATTCTACAATAATAAATATTGGTTTATTAATGTTGGTTTACATGCATTCTAGATGCGTGCATAAAGGACTAGTACAAATAAAAAGTAACACAAACTTGACGGCACTGGTAGTAGATGTAGTAGCAGGAGTTGCTGGAAATGCTCTACCTTGAAATGCAACCATAGGGTTATGTGCTGGCAACTGCAAGTTACATTTATGGTGTTATTAGTGGTAGGATGTAACTAATGTTAAATCTCATAAGCATTGACTACTTAAATGGTTCAAGTACTCCTTTTAAAAATCCAACAAGGGAGTTTTGTGATATTAACTTCAGCAAATCCTTTATTTTCATCTTTGGTTTTAAATAATGCCTTTAGAGTTTAGAATATACCTTGAGTGTCTTTGACCTGTATACCTTCGTAACTGACAGTCTGATATACCCAATTGTTTATGTATTTATATTCTGGGGGAGGGTAACAATTGACATAAAATTTTGTTACTTCAGATTTGGACCAAGAGAAAGTAAGAAGGCAATGATGTACAGTAATGTTGGCCGGCTGAATTGCAGTGTCAGCTATACACCTTTTGCTACCCAAGTTCGTGGGCAGGTAAAGGATTTTCTTAAACAGCAAATGGGTAGTCTATTATCTTTGTGCTTTGTTGTATTGCTCATGAAGTTTTTCTGCGTTATTATACATATAATTTAATCTTTCTAGGGCTCAGAACATAAAGAGTATTCCTCAGTGCTCCATAAAGCTTTGGAGGGTGCAATATTATTGGAGTCATTCCCGAAGACAACAGTTGATGTTTTTGCATTAGTAATGGAATCTGGTGGAAGTAAGTTATCTCTTATCTGCATTGAACAAATATTTCCTTTCCCTGAGAAAATGGTTGGAGGTTCAACACTCAATTGAAATTATGACACTATGACAGTGCACGAACTAAGGATAGGTAGATCTTTTCAGCTACAGTTGTCATGAATTCTTTTCGGCTGTGCTCCGTTATTCTGTATTGGTTGCTAGATAGAAGAAAACTAAAATCTGACTGAAACCTTTCAGTTACTTTTCCTACTTAACACATACTTTTTGGGATGTGTGGAAAATGTCAATTCAGTTTCCATAACAGTATTAGGATATGATTGAATTTCACAGGACACCTTCAGAGTTATGGAGAAAGGACAGAAAGGAACACAACTATTACAAGGGTGTTAAAAAGGCTTAAAACATGTTAAATCCTGAACTATGATGGGTTGGGAATATGTGACAATGAGTTCCAGACATGGGGCTTCTTTGACATCTCCTACCTGTTTTGCTTCTTTAGGGATAGTTTGTAGGATCACAGAAAGGGAACTTTGGATTTTACAGTTCTGTTGTTTTTGCCCTCTGATATCTCTGTTCTTTCTCTCTATTTCTTTAATGGGGTCATCCCACATCTGTTTTGACTGAACCTACCAATCCTTGGAAATTAGATTCCTTCACTTGGATAGTAAAGGGGAAATCAACTGCCTCCAAAATCCTCGGAGTACTGATTTCCTTATCTGCATCCATCCCCTGCCTACCTCCCACTTACTGCTGCTTCCACCATTTGGCCCATAAGGCCATAACATTTCCACTGTCCCCTTCACTACTTATACTATCCACGGTTACGTAATACGGACTCCGATTTAGAAAGATTCGAACTAATGTGACTACGATGTCAATCTAATTCGGCCAGTAATCGAGTTGACCGATCTTGAGTCTTCTTCGCCGAATCGTCACTGATCTATGATTTTGAAGCTTCTGCGTGAAAATGGAGGATGGATGATTTGATCCATTAATCGATCTGATTCAATCTTGAGTTTTCTTCGCCATTGCTGATTTTGAAGCTTCTCTTCTGGGTGAAAACGGACAATGGAAGAGGAAGGTGAAGAGTAAAATGGCGGACAGCTGTAAGCATGGAATCCTAAAAAATCAGAAGGCCCGTAATCTTCATTGAATAATTGCACGAGTACGTAGGAATATATAAAGGTTGAAAGCTGGATTCTTTTTCTTATAATTGAATAATTGTACTTAAGAAAACATTTTAAAATTATGTGTTTTTTTCCAATTAAATGAAGTATCGTATTTCGTAGTATTTTGTATTATGCTATTAAAAATCGTATTTCACTATACCTGAAAACGTATTACAATTCGACCAACCCTCGTATTTCGTACTCCCTCCGTCCCGGAATACTCGACTCGGTTTGACCAGCACAGAGTTTAAGAAACTTGAATTGACTTATTTAATTTAATGTAGTTAGTGGGAAATGTGTAATGGGGTGGGGTTGGGGGAGAGTAGGGGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGATTAATAAGGGTGGAGTGAGAAATAATATAATGGAGTGAGAAATAATATAATATTGTTAGAATATTTCTATTTTAAGAAACAGGTCAAGTATTAAGGGACGGACCGATAAGGAAAACAGGTCAAGTATTCCGGGACGGAGGGAGTATTCCTATTGCGTATTCATACTAAATCGTACTATCTCCGTTTCATAAAGATCTTTACAGTTACTATTTGCACAAATATTAAGACAAAAGTAAAAAAGTTGGTTGAATATAATAAAATATGGATAAAATAAGAGAAATGTGGAAAAAGGTGGATGGGTGTAAGGAAAAAATGAATAAAGTAAGAAAAAGTGAGTGGAATATTGTAAATATTGTGGTGTAAGAAGGGTAAGGTAATAAATTTTCATGTCCACAAATGGAATAAAGCAAAGTGTAAAGACCATTATGAAACGGACTAAAACGGAAAGTGTAAAGATCATTTTTAAACGGAGGTAGTACTATGTATTAGACAACCCTGATTCTACCTGCCACATAGGCATTCCTCCCTCGTATCCACGACTACTCAATATCTGGACCAATTAGTGTTACTGCTTCTGGTCTATATGCTTGTTTTTTTAATGATATATTGACACGTTTCAAAACAGTATGCCATATTTGACTTTGGGCGCCAAGTGAGTGAGTTGTTAAGTCATGTGTCATTGTCCAGTACATATTCCTTCAGCATTTATGAATTTGTGCATCATGTCGACAGGTGATCTCCCGGTTATTATATCATGTGCCAGTCTTGCTCTAGCTGATGCAGGGATCATGATGTATGATTTGGTTGCTGCAGTTTCTCTGGTATGCATCTCATCCAATTTTTTCATTTCCCACTGATTTTCCTTCTGGGTTGTCAGAAAAGTAACGTGGCCTCTATTGTTGAAACCATATCTTGTTATCTTAAGGTCATATTATGTATATATGCTATAAACTTGGAAAGATACTCACTCACTAAGTCACTAAAGCTTGTCTTTGGAATTCATTAGGATGAACGTAACCACCCATCCTTTGTTCATTGGCTATTGGTATCACAGTTTGTGTTGTTCATTGGCTCCCTGTTAGTTTGTTTTCTTCTTTTGCATCTACTTTTGATTCTTCTACCTCTGCATCTGCTAATGCATCTTCTGCCCCTTTTTTTGTGGGTTGAGAACTTGAGAGTGCTGTTGCAATGGCAACATTAGGAGGGTTGCACTTTCTTTTGTTATGACCCTCCTGTCCACACTTAATACAACCTATTCAATCCTGTCATTGTGGCATCACAAATACTTCCACCTTGTTATTCTTCTATTTACAATTGAAACTTTCAGGAGTCCACAATTTCTATGCTACATCCTTCACCACTTCTTGTCACTGTTCTTGGATCATCTAACTCAAGCTTGGAAATGGATGGAAACAGAGAATATCCTCCATAAATAAATGAGCTTTTGCCAAACCTTCCATTTCTCATTTGGAAAACACCCCCAAATCTGTGGAAAGTCAAAAAATAAACTTCCATGGTACCGTACCCTGTACTATTCCTCATTTCTCATCTATCCAACATCTACTAATTCGTAAGCTACAACAAACCGTATTTAAATCCTTTTAATGACCAGTGCATTCTTTTCCATACAAGAATTCGTAGAAAAAAAGAACCCAAGACACTGAACTTAAATCCGAAAAATTCAAATTAGAAGAAATATCTGGTGAGGAAGCTCAGAAGGTGAGTTAACTATTTAAGAACTTACCTTGCAATTGGAATGTGCTAGGTGTTTTTGATAGTTGAGATAATTGAAGGGATTCAGTTGTCGTCAACTAGAACTCCCTTCTTCTCATTAGCGTTATGAATTCATGGTACTCATCGCTTTTAAAAACAAATATTGCTTTCATTTAACTACCACTTGCAAATTGTTTTAATTGTGGATTGGTTAATTTAGCTGGGTATGAACAGAGTTAGGGATTCAGGTCCAAGATGATTCCCTAAAAGGAGATAAATAAAAACCCCCAGGTTTCAAAAGACAATTTAGAACTTTTAGGTTTCAAAAGTGTACTCTTTTATTTATGCTCTAGATTGGGTTTCGTGGGGATCTTAGAGTTTTGTTAGAGAGGTTGTTTGACATTTGATGAACTTAAGGACTTTAACTGCGAAAACTGACAAGTATAGCTGTTGGTTTTATAAGGAGGGATTTAACTGTTGTCCTTCGGTTACCCATCATGTTGGGGTCCCTACGGAGGGGATGAATTCTAAGTTAACAGTTGTTTAATGAGGCATTGTCTATGAAATAAATCATATATGATTGTGACAGGGTAAATAGGTGCGTGAATGAATTGCCAAAATATTAGGGGAGATTGATAGATTTGATACAAATGGACATTGCCTTAGGATTCTAGTACACTCCAATTGCCCTTTTTTTCTTTAACTTTGATAACACAAGATGTCAATGAGCAACATGATACCTAGTAGGTGAACTATGAGAAGAGGGAACTTAACTATGAGAAAGGAACTTCGGGAAATTTTCATTGCTGGCCTTATGTTTTTGCACTCTATTTGGCAACAAAAAATTCTGTCAATTTAGATATTTACAAGGGTACAATGGGGATAAATGTTGGACAAATAAGGAAAGATTTCAAAATGGGCTAATAAATAAAAACAACTCAATACGGAAAGATGACTAATATTCAAGTACGGGGGAGTATAAGAATTAAGGAAACAAAAATGGAGGGTTTTGGTTAATAAATCAATTAAAAGAATTAAGATGACTAATATTCATGGTTAATTTTTTATTATTTGGGAAAGAAATATTAAACTAGAATTTTTAACCCAAGCAACCACCATAGCCAGCATTGACCTTAACGGCTTCACCATCACCATCCTAACCCCACAAACCTCCATTAGTCCATCCACCGCTTCATGATCACCAACCCCACATTTCCTCAATAGGCTCCCATCGTACCCAACCTAAAGCCACAATTCATAACCCCTCGCTCACCTAAAACCACCAAAAATACTCATGCCAAAAAGACAAACACCTCAAATGTATCCTAGCAAAATCTACTGTCTAACCTCCTAACCTCCTTTAACAGTTTAACCTGCGCTCAAATGATTGTTGTTCGATCAAACCACAATGATTGTATATAGGGAGTGAAGGAAGTAGGTGGTCTGCCATGGTGTCACGACTCGAACCGTATGGTGCGCTCTTGTCTACGGGCGGCAAGGGCTTGTGCGAAAAGTGTGTTTGTTGAGGCCCGACGAGCAGGTGCTTGATTTAAAATAGGCACTCTCGCTTATTGGCGACAAAAGCGAGGGTCAAGGGTCAATGTGCGCACAAGCGGGACCGACAACGAGAATGTACTTGTTTTGGGGAGACTTTGATGAGTCTTGAAAAGCTTAAGAACGAGCGACATCGCAATATCTATAAAGGCTTTCAACAACGCTGGTATTTAAGCAAAGACAACTTCTGACGAGATATCTATTGGTCCATAGTCCTCATAAAGGTTTATTTTGAATTGGCATAAATTTATAGTAAATGTTGGATTGAACGCTGGAGTGACAGAAACATAATAATTATATCTAGAGGTTAGAAAACTATTTGAAAAGTCCTAAAAAGCAATAGATAAGGAAAATACAAGGAAAGGAAAGGAGTGAAGGAAGTAGGTGGTCTGCCATGGTCTGGCTGAAGGTCACCTAACTTTTTTCGAAGTTGCCGAGCATGATAGGTGCTAGCTAAGTTAGGGACTCTGGTGGTTTGTTTTCCAATGTTGAGTCTATTTTGTGTTTGGGTTAGCTACACTTTGTTACCAAGCTTTATGATTATGAGGAAGTTTTTTCCAGGAAAGGTATATGTATAATTCAAAACTTCACTATACTCCCTTCATTTGTCCTTTGATTAATTTGATTAGCCATCGAAATTTGGGGAAGGTCAATGATGGAAGAGATGTGGTGGTAATGTAGGTGAGGTGGAGTCATGGAGGAAAGGAACGTTGAATTAATGATGGGGGTCATTGGCGGGTTATGATCTTTTAAGTGGGCATCTAAAGAACGATTTCTTGAAATGTCTACCAAACTACCAAATGTGAATGGTTTTACTCACACTGTCCAAACAAAACATTTTTTCGAGTTTCCTTTGTGTTACTTTGTATAAAAATCAAGAATACATACATGTCTATGTATTAGATTTCCAAAATTTGTTGGCTTCCAAACGTGAAGTGCAAAACTATAGGGCCACCAATGAGAAAATCCAAGAATTTTTGTTAGTTAGAAAATTCCCCAGTATGATTCTGATCAAAGTAGTTCAACTTCTTTGTCCTCTTTTCCATAGTGGTCTGCGAGATTTCTGTGCAGTACTTGCAGAAAATGTGGCTTGGAAGCCAACTATCTTGGGTGTCTTATGTCCAACCAGTGTTACCCGGAACGTGGAACGCAGCCACGTTCCGTGCAACATTGTGTCTAACTATTTTGTAGGAATTGGGTTTTTCTCAAAATTGGGAACTGGCTCGATGCTGGTGACTGGTGATATGCTATTTATTTCAATGATATATCTCCTTCTAAATGTTTGGTAGAGTAGTGGGCAAATGAGATACATTAAGGGCTAGAAAACTTTGGCAACGAAGATGGTTGATACCTTCTAGAGATGTTCCTTGGCGTCTAAGGTACTTGCTAATGAGAGAAAATTTGCACTTTCCTTGATTATATGCTGCTTGTCATTTTTTCATTGAATGGATGAGAATGGTTATACGAAGTATTTAATTTTCCATCCCACATGTGACACATGCACGTAAAAACCTTGTGTCCACTAGGTGGTGGTTGGTTGATATAGTTTTTGGACACCACTTTATAGAAACTAGCTTGAGAAGGTATGGGAAAATGTTTTCTTATAATGAACTTTCTCGATGCTAGACCCCTCTGAACAGTAGGATTAAAATATTTCTCAGCCGTGCTCTTGGTGTCCGTTGGGTAAAGTTTTACCGTGGCCCATCTGCCAATCTGCCATTGATAAGTTGTAAGTAGATGACTTTGAAATGCTACCTTTGTGCTTTTGGATGGGGAGTCTGCTCCTTCACTTTGTCAAAGAAGCTTAACCCATGCTCATTTGTTGAAGATTGGCTACATAGAGAGGGATTAATATCTCATCCAAGCTCTTCATACAACTTTGGAAAAATGGTGATTGTGAAAGGATGGCCTAGCATATTTTTTTAATTTTGTAATTTTCTTCTTGTATTGCTGTCCTTGATTACATGGTTGTATTGCTGTCCAACGCTTTGGGACGTGTTTTGACACATTGATGAAGGAATAAAGAGTGGTGGACTTGAAATTATTTACATGTGGCTAATGAGCATAAATTTAAATATTTTTTTTACGAATATTGCACTTGGTACTTTGGGAATACAATTCATGTAGCAATGTTACGTATATTGCACTTGGTACTTTGGGAATCAATTCGTGTAGCAATGTAATTACACAGTCAAGTTATCGTGCTCCGTAGTTGTTACATTTTACCTCTGTAATTACATTTCAAATTACAGAGCTAAGTGAGCATTTTGACTGTGTAATCACAGTATCGTATTCCCAAAGTATGAAGTGCAATATTCGTATAAATATAATATTAAAATTGATGCTCATTAGCCACATGTAATAAAAGTCAAAGCTCACCACAATTTAATTCCTTCATCAAAGTATCAAAGATACTTGAATTTGAAACCTTTTTTTTCTTCTGACATTATAAAGTTTTATTTTAAAGAATTTGAAAACCCCTCGCAAACCCTTATCCTGTACCTAAGCGAACCACGGATCAGGTAATCCTGGATGAACCAAACAGTGACAAAAGGGAATTACGAAACGTTCATTCCATTTCTAGAATAAATCCAATCAGGGTGGGGGGATTCAGGGTCATTCCTTTCCTGTATACCTTTATGGTTTTCATTCGTTTCCCCAGCGCGAACCAAACACCCCCCGATGGTCTAAGTCGTGTGTTGGCAAACATGGCCAAAAGAAATAGGAAGTTTTTTGTGGGATGCAGGGAATATTTTTTTCATAGTAAATTTAAATAGACCACTGTTGCTCAATGGCGTAAGCAGTTCTAGGATTCTGGGATGTTCAGGTGTGGAATAACTTTAATTGATTAAGGTTCAACTGCATATGTAGCCATGTAGGAGACGGGAGTTTTGCGGTTTTGATCATAGGATTATCAACTAGAACTGTTCTGTCTCAAACAGTCTTCATATTCAAGAAAAGCTTATAATTGGTGAACTGGGAAAATGGCTGTTAATGGAGGAATTTGCTGTACGGCTATATTCCAGAATTTAATGGGTGACCTTAGGTGGTTTCAATAATCACTTGGAAACATTTGTTGGCCCCTATTGAGCGTTGATCAATGCTGTGCATTGTCACCCTTTCTTGTTGCCTAAGGTTTACCTGATTAGATGGTTGAACGATTTAGGCACCATCCCTGACTTTATTTTCCATCAAAGATGTGAAATTGCAAATTACGCATCTTATTTTTCAGATGACTTGCTGCATTTCTCCAGAGCTAATATAGTTCCTTTGAAAATTGCCTTTTCAAGCTTTTCTAACTACGGTAGTGCTTGTGGGTTAGAAGGTAATTTAGATAATAGCGACATCTACTTTTGTGGCATCTTTGAAGAGCTTCATCAGACTCTTATGCATGAGATTGGAATTCTTAAAGGTATTTTGGTGTTCCAAATATTAAGAGTAACAAACTACTTATAGTCCAGGTGACTTTGTGTAGAGCATTGGTTGAAGAAGCTAAGGCTAGTACCAATAGCTTAACGTTACGATCATGCTATCCAAAATGTTTGTTGATAACTTGGGACTTTATGGTTCTCTTTGATTAGAATGTGTATGTGGGAATTGTGTAAAATTATAATTGTAATGATATATAATGTTGGTTTTGTAGTCTTGTGTTGGGCCCAGTCTCGTAATTGATCCTGTTCTGGAGGAGGAACGCTGGCAAGATGGAAGTTTAATGTTAACCTACATGCCTTGTCGTTCAGAGGTAACACAGTTGGCTGTTAATGGAGAATGGACAACCCCAAAGATTCATGAGGTATCTCATGATTCCTTAAATCTCATTCCTAATATCATACATTTTTGCTGTTTGGCTACTAGTCAAATAAATATAATGTGAATTTGCCAATTTGAATGCAGGGAATGGAACTCTGTCTTGATGCCTGCAAGAAGCTTGCTGGGATCATGAGATCGTGCCTCAAGGAAGAAGCTGATTCTCCTTCAATTCAGTAATCCCCTTGTTTACTTTCAGATGTTTCAGATGGATTTATGGTAGATAATTTATTCTACCAGTTTTGCCCTTAAGTTATTAGATACTCTCCATCCCATTGTAAATACCATACTCCCTTACTAGATCATACTGAATCAGTAGCTACGGAAGATTAGTGATTTTGAATGGGTAATTTCTATTAATGAGAAAAAAAAATTATCACTAAAACATAGATAACTTTTAAGTATTTTGAGTTAATTTTTACTATGATGTATCATATTTATAACCTATTACTATTTGGCCGT

mRNA sequence

GGCTCTTATAGAAGCAAAGCTTGGCACAACGCCGCTGCGCAAGGTCACACTGTCACAGTGTCAAAAACTAGCAAAGCCCTGTTGCGAGAGAACAAGTGAGAAAACCATGTCTTCTAGAGCAGGAACGACGCCATCAACATACTCTCCTTCAACCCAAAAGAAGAAACCCCAAAAACCCACTTTCAATGACTCTAATGGAGTTCGTTCCGATGGTCGTGGCTTTTACCAGTGTAGACCTGCTTACTTGAAAACTGGTGCTGTCAGCGCTGCTGGTGGTTCTGCATATGCAGAATTTGGCAACACCAAAGTCATTGTGTCTGTATTTGGACCAAGAGAAAGTAAGAAGGCAATGATGTACAGTAATGTTGGCCGGCTGAATTGCAGTGTCAGCTATACACCTTTTGCTACCCAAGTTCGTGGGCAGGGCTCAGAACATAAAGAGTATTCCTCAGTGCTCCATAAAGCTTTGGAGGGTGCAATATTATTGGAGTCATTCCCGAAGACAACAGTTGATGTTTTTGCATTAGTAATGGAATCTGGTGGAAGTGATCTCCCGGTTATTATATCATGTGCCAGTCTTGCTCTAGCTGATGCAGGGATCATGATGTATGATTTGGTTGCTGCAGTTTCTCTGTCTTGTGTTGGGCCCAGTCTCGTAATTGATCCTGTTCTGGAGGAGGAACGCTGGCAAGATGGAAGTTTAATGTTAACCTACATGCCTTGTCGTTCAGAGGTAACACAGTTGGCTGTTAATGGAGAATGGACAACCCCAAAGATTCATGAGGGAATGGAACTCTGTCTTGATGCCTGCAAGAAGCTTGCTGGGATCATGAGATCGTGCCTCAAGGAAGAAGCTGATTCTCCTTCAATTCAGTAATCCCCTTGTTTACTTTCAGATGTTTCAGATGGATTTATGGTAGATAATTTATTCTACCAGTTTTGCCCTTAAGTTATTAGATACTCTCCATCCCATTGTAAATACCATACTCCCTTACTAGATCATACTGAATCAGTAGCTACGGAAGATTAGTGATTTTGAATGGGTAATTTCTATTAATGAGAAAAAAAAATTATCACTAAAACATAGATAACTTTTAAGTATTTTGAGTTAATTTTTACTATGATGTATCATATTTATAACCTATTACTATTTGGCCGT

Coding sequence (CDS)

ATGTCTTCTAGAGCAGGAACGACGCCATCAACATACTCTCCTTCAACCCAAAAGAAGAAACCCCAAAAACCCACTTTCAATGACTCTAATGGAGTTCGTTCCGATGGTCGTGGCTTTTACCAGTGTAGACCTGCTTACTTGAAAACTGGTGCTGTCAGCGCTGCTGGTGGTTCTGCATATGCAGAATTTGGCAACACCAAAGTCATTGTGTCTGTATTTGGACCAAGAGAAAGTAAGAAGGCAATGATGTACAGTAATGTTGGCCGGCTGAATTGCAGTGTCAGCTATACACCTTTTGCTACCCAAGTTCGTGGGCAGGGCTCAGAACATAAAGAGTATTCCTCAGTGCTCCATAAAGCTTTGGAGGGTGCAATATTATTGGAGTCATTCCCGAAGACAACAGTTGATGTTTTTGCATTAGTAATGGAATCTGGTGGAAGTGATCTCCCGGTTATTATATCATGTGCCAGTCTTGCTCTAGCTGATGCAGGGATCATGATGTATGATTTGGTTGCTGCAGTTTCTCTGTCTTGTGTTGGGCCCAGTCTCGTAATTGATCCTGTTCTGGAGGAGGAACGCTGGCAAGATGGAAGTTTAATGTTAACCTACATGCCTTGTCGTTCAGAGGTAACACAGTTGGCTGTTAATGGAGAATGGACAACCCCAAAGATTCATGAGGGAATGGAACTCTGTCTTGATGCCTGCAAGAAGCTTGCTGGGATCATGAGATCGTGCCTCAAGGAAGAAGCTGATTCTCCTTCAATTCAGTAA

Protein sequence

MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCLKEEADSPSIQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14481.1	Spo14481.1	mRNA

Homology

[Close]

BLAST of Spo14481.1 vs. NCBI nr
Match: gi|902168546|gb|KNA07517.1| (hypothetical protein SOVF_171130 [Spinacia oleracea])

HSP 1 Score: 506.5 bits (1303), Expect = 2.700e-140
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60
           MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY
Sbjct: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60

Query: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120
           AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA
Sbjct: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120

Query: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180
           LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG
Sbjct: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180

Query: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240
           PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG
Sbjct: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240

Query: 241 IMRSCLKEEADSPSIQ 257
           IMRSCLKEEADSPSIQ
Sbjct: 241 IMRSCLKEEADSPSIQ 256

[Close]

BLAST of Spo14481.1 vs. NCBI nr
Match: gi|731345724|ref|XP_010684069.1| (PREDICTED: exosome complex component MTR3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 429.1 bits (1102), Expect = 5.400e-117
Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFND--SNGVRSDGRGFYQCRPAYLKTGAVSAAGGS 60
           M S+AG+TPSTYSPSTQK K QKPT     SN +RSDGRGFYQCRPAYLKTGAV+AA GS
Sbjct: 1   MGSKAGSTPSTYSPSTQKSKHQKPTSTSIHSNQLRSDGRGFYQCRPAYLKTGAVNAAAGS 60

Query: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLH 120
           AYAEFGNTKVIVSVFGPRESKKAMMYSN GRLNCSVSYTPFATQVRG GSEHKE+SSVLH
Sbjct: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNTGRLNCSVSYTPFATQVRGLGSEHKEFSSVLH 120

Query: 121 KALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSC 180
           KALEGAI+LESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLS 
Sbjct: 121 KALEGAIILESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSS 180

Query: 181 VGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKL 240
           +G +L+IDP+L+EER QDGSLM TYMP RSEVTQLA+ GEWTTPKIHEGMELCLDACKKL
Sbjct: 181 LGINLIIDPLLDEERSQDGSLMFTYMPSRSEVTQLAITGEWTTPKIHEGMELCLDACKKL 240

Query: 241 AGIMRSCLKEEADSPS 255
           A IMRSCLK E DSPS
Sbjct: 241 AKIMRSCLK-ETDSPS 255

[Close]

BLAST of Spo14481.1 vs. NCBI nr
Match: gi|719992923|ref|XP_010253724.1| (PREDICTED: exosome complex component MTR3 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 385.2 bits (988), Expect = 9.000e-104
Identity = 190/252 (75.40%), Postives = 222/252 (88.10%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60
           MS +  T P+TYSPS  +KK Q P F D + +R DGRGF+QCRPA+L+TGAV+AA GSAY
Sbjct: 1   MSGKTATAPTTYSPSPTQKKRQ-PIFKDVDWIRPDGRGFHQCRPAFLRTGAVNAAAGSAY 60

Query: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120
           AEFGNTKVIVSVFGPRESKKAMMYS++GRLNC+VSYT FAT VRGQGS+HKE+SS+LHKA
Sbjct: 61  AEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHKA 120

Query: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180
           LEGAI+LESFPKTTVDVFALV+ESGGSDLPV+ISCASLALADAGIMMYDLV +VS+SC+G
Sbjct: 121 LEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSCLG 180

Query: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240
            +LVIDP+ EEE +QDGSL++T MP R+EVTQL + GEW+TPKIHE +ELCLDAC KL  
Sbjct: 181 ANLVIDPISEEESYQDGSLLITCMPSRNEVTQLTLTGEWSTPKIHEAVELCLDACSKLGD 240

Query: 241 IMRSCLKEEADS 253
           +MRSCLKE A +
Sbjct: 241 VMRSCLKEAASA 251

[Close]

BLAST of Spo14481.1 vs. NCBI nr
Match: gi|225435349|ref|XP_002285257.1| (PREDICTED: exosome complex component MTR3 [Vitis vinifera])

HSP 1 Score: 381.7 bits (979), Expect = 9.900e-103
Identity = 188/253 (74.31%), Postives = 222/253 (87.75%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60
           M+ ++  TPSTYSPS   K  ++P F D + VR DGRGF+QCRPA+LKTGAV+AA GSAY
Sbjct: 1   MAGKSAATPSTYSPSPAPKT-KRPIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSAY 60

Query: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120
           AEFGNTKVIVSVFGPRESKKAM YS  GRLNC+VSYT FA  +RGQGS+HK YSS+LHKA
Sbjct: 61  AEFGNTKVIVSVFGPRESKKAMAYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHKA 120

Query: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180
           LEGAI++ESFPKTTVDVFALV+ESGGSDLPV+ISCASLALADAGIMMYDLVA+VS+SC+G
Sbjct: 121 LEGAIIVESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLG 180

Query: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240
            +LVIDP+LEEE +QDGSL++T MP R+EVTQL VNGEW+TP++HE M++CL+AC KLA 
Sbjct: 181 KNLVIDPILEEESYQDGSLLITCMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSKLAK 240

Query: 241 IMRSCLKEEADSP 254
           I+RSCLKE A +P
Sbjct: 241 IIRSCLKETASAP 252

[Close]

BLAST of Spo14481.1 vs. NCBI nr
Match: gi|590590598|ref|XP_007016781.1| (3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 375.6 bits (963), Expect = 7.100e-101
Identity = 189/249 (75.90%), Postives = 220/249 (88.35%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPS-TQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSA 60
           M+++ G+ P+TYSPS TQK +P     ND + VR DGRGF+QCRPA+ +TGAV++A GSA
Sbjct: 1   MAAKPGSAPTTYSPSLTQKTRPPIFKGNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA 60

Query: 61  YAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHK 120
           YAEFGNTKVIVSVFGPRESKKAMMYS++GRLNC+VSYT FAT VRGQGS+HKE+SS+LHK
Sbjct: 61  YAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK 120

Query: 121 ALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCV 180
           ALEGAI+LE+FPKTTVDVFALV+ESGGSDLPV+ISCASLALADAGIMMYDLVAAVS+SC+
Sbjct: 121 ALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCL 180

Query: 181 GPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLA 240
           G +LVIDP+LEEE +QDGSLMLT MP R EVTQL   GEW+TP I+E M+LCLDAC KL 
Sbjct: 181 GKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLIFTGEWSTPDINEAMQLCLDACGKLG 240

Query: 241 GIMRSCLKE 249
            +MRSCLKE
Sbjct: 241 KVMRSCLKE 249

[Close]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJU8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_171130 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.900e-140
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60
           MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY
Sbjct: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60

Query: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120
           AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA
Sbjct: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120

Query: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180
           LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG
Sbjct: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180

Query: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240
           PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG
Sbjct: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240

Query: 241 IMRSCLKEEADSPSIQ 257
           IMRSCLKEEADSPSIQ
Sbjct: 241 IMRSCLKEEADSPSIQ 256

[Close]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXI2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161750 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.800e-117
Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFND--SNGVRSDGRGFYQCRPAYLKTGAVSAAGGS 60
           M S+AG+TPSTYSPSTQK K QKPT     SN +RSDGRGFYQCRPAYLKTGAV+AA GS
Sbjct: 1   MGSKAGSTPSTYSPSTQKSKHQKPTSTSIHSNQLRSDGRGFYQCRPAYLKTGAVNAAAGS 60

Query: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLH 120
           AYAEFGNTKVIVSVFGPRESKKAMMYSN GRLNCSVSYTPFATQVRG GSEHKE+SSVLH
Sbjct: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNTGRLNCSVSYTPFATQVRGLGSEHKEFSSVLH 120

Query: 121 KALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSC 180
           KALEGAI+LESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLS 
Sbjct: 121 KALEGAIILESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSS 180

Query: 181 VGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKL 240
           +G +L+IDP+L+EER QDGSLM TYMP RSEVTQLA+ GEWTTPKIHEGMELCLDACKKL
Sbjct: 181 LGINLIIDPLLDEERSQDGSLMFTYMPSRSEVTQLAITGEWTTPKIHEGMELCLDACKKL 240

Query: 241 AGIMRSCLKEEADSPS 255
           A IMRSCLK E DSPS
Sbjct: 241 AKIMRSCLK-ETDSPS 255

[Close]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Match: A5BI33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02660 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 6.900e-103
Identity = 188/253 (74.31%), Postives = 222/253 (87.75%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAY 60
           M+ ++  TPSTYSPS   K  ++P F D + VR DGRGF+QCRPA+LKTGAV+AA GSAY
Sbjct: 1   MAGKSAATPSTYSPSPAPKT-KRPIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSAY 60

Query: 61  AEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHKA 120
           AEFGNTKVIVSVFGPRESKKAM YS  GRLNC+VSYT FA  +RGQGS+HK YSS+LHKA
Sbjct: 61  AEFGNTKVIVSVFGPRESKKAMAYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHKA 120

Query: 121 LEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVG 180
           LEGAI++ESFPKTTVDVFALV+ESGGSDLPV+ISCASLALADAGIMMYDLVA+VS+SC+G
Sbjct: 121 LEGAIIVESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLG 180

Query: 181 PSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAG 240
            +LVIDP+LEEE +QDGSL++T MP R+EVTQL VNGEW+TP++HE M++CL+AC KLA 
Sbjct: 181 KNLVIDPILEEESYQDGSLLITCMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSKLAK 240

Query: 241 IMRSCLKEEADSP 254
           I+RSCLKE A +P
Sbjct: 241 IIRSCLKETASAP 252

[Close]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Match: A0A061GX12_THECC (3'-5'-exoribonuclease family protein isoform 1 OS=Theobroma cacao GN=TCM_042083 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.000e-101
Identity = 189/249 (75.90%), Postives = 220/249 (88.35%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPS-TQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSA 60
           M+++ G+ P+TYSPS TQK +P     ND + VR DGRGF+QCRPA+ +TGAV++A GSA
Sbjct: 1   MAAKPGSAPTTYSPSLTQKTRPPIFKGNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA 60

Query: 61  YAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLHK 120
           YAEFGNTKVIVSVFGPRESKKAMMYS++GRLNC+VSYT FAT VRGQGS+HKE+SS+LHK
Sbjct: 61  YAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK 120

Query: 121 ALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCV 180
           ALEGAI+LE+FPKTTVDVFALV+ESGGSDLPV+ISCASLALADAGIMMYDLVAAVS+SC+
Sbjct: 121 ALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCL 180

Query: 181 GPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLA 240
           G +LVIDP+LEEE +QDGSLMLT MP R EVTQL   GEW+TP I+E M+LCLDAC KL 
Sbjct: 181 GKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLIFTGEWSTPDINEAMQLCLDACGKLG 240

Query: 241 GIMRSCLKE 249
            +MRSCLKE
Sbjct: 241 KVMRSCLKE 249

[Close]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Match: G7JND2_MEDTR (Exosome complex exonuclease RRP41 OS=Medicago truncatula GN=MTR_4g058720 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.200e-100
Identity = 189/252 (75.00%), Postives = 219/252 (86.90%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPS--TQKKKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGS 60
           M+ ++GTTP+TYSPS  T KKKP      + +  R DGRGF+QCRPA+ +TGAV+AA GS
Sbjct: 1   MAGKSGTTPATYSPSLTTGKKKPL--LLKEEDWTRPDGRGFHQCRPAFFRTGAVNAASGS 60

Query: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLH 120
           AYAEFGNTKVIVSVFGPRESKKAMMYS+ GRLNC+VSYT F+T VRGQGS+HKEYSS+LH
Sbjct: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLH 120

Query: 121 KALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSC 180
           KALEGAI+L+SFPKTTVDVFALV+ES GSDLPV+IS ASLALADAGI+MYDLVA+VS+SC
Sbjct: 121 KALEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSC 180

Query: 181 VGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKL 240
           +G +LVIDP+ EEE  QDGSLM+T MP R E+TQL V GEW+TPKI+EGM+LCLDAC KL
Sbjct: 181 LGKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKL 240

Query: 241 AGIMRSCLKEEA 251
           A IMRSCLKE A
Sbjct: 241 AKIMRSCLKESA 250

[Close]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Match: RP41L_ARATH (Exosome complex component RRP41-like OS=Arabidopsis thaliana GN=RRP41L PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 7.100e-93
Identity = 174/254 (68.50%), Postives = 207/254 (81.50%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSN--GVRSDGRGFYQCRPAYLKTGAVSAAGGS 60
           M+++ G    TYSP    +  + P F DS+    R DGRGF+QCRPA L+TGAVS+A GS
Sbjct: 1   MAAKPGAATPTYSPKIVGRS-RLPIFKDSDLDWSRPDGRGFHQCRPALLQTGAVSSASGS 60

Query: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLH 120
           AYAEFGNTKVIVSVFGPRESKKAM+YS+VGRLNC+VSYT FA+   GQG++HKEYSS+LH
Sbjct: 61  AYAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSYTNFASPTLGQGTDHKEYSSMLH 120

Query: 121 KALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSC 180
           KALEG I++E+FPKTTVDVFALV+ESGGSDL V+ISCASLALADAGIMMYDL+ AVS+SC
Sbjct: 121 KALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSC 180

Query: 181 VGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKL 240
           +G SL+IDPV EEE  +DGS M+T MP R E+TQL + GEWTTP I+E M+LCLDA  KL
Sbjct: 181 IGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASSKL 240

Query: 241 AGIMRSCLKEEADS 253
             IMR CLK+ A +
Sbjct: 241 GEIMRDCLKQSASA 253

[Close]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Match: EXOS6_DANRE (Exosome complex component MTR3 OS=Danio rerio GN=exosc6 PE=2 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 9.800e-34
Identity = 92/251 (36.65%), Postives = 139/251 (55.38%), Query Frame = 1


		  
Query: 19  KKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRES 78
           K P+ P+     GVR +G      RP + + G VS A GSAY E GNTK+I SV+GP+E+
Sbjct: 25  KAPKAPS--SRQGVRGNG----DVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKET 84

Query: 79  KKAMMYS-NVGRLNCSVSYTPFATQVRG---QGSEHKEYSSVLHKALEGAILLESFPKTT 138
           ++        GRL C     PF+   RG   QGSE ++ S+ L ++L   + L  +P++ 
Sbjct: 85  ERRDETDMKTGRLVCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYPRSQ 144

Query: 139 VDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEE-- 198
           +DV  +V+E+ GS L   ++CAS+ALADAGI MYD+V   +L   G + ++DP   EE  
Sbjct: 145 IDVNVMVLENDGSVLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAEECG 204

Query: 199 RWQD------GSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCL 254
            WQ+      G + L  +P  ++V+ L  +GE     + E M  C+D C KL  +++  L
Sbjct: 205 SWQEGYGDNQGCVTLALLPNLNQVSGLNADGEMREDTLTEAMRTCMDGCHKLYPVVQQAL 264

[Close]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Match: RRP41_CENSY (Exosome complex component Rrp41 OS=Cenarchaeum symbiosum (strain A) GN=rrp41 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.600e-31
Identity = 76/225 (33.78%), Postives = 127/225 (56.44%), Query Frame = 1


		  
Query: 28  DSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSN 87
           D NG+R DGR   + R   +  G ++ A GSAY EFG+ K++  +FGPR+   K M+ + 
Sbjct: 12  DENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVRTE 71

Query: 88  VGRLNCSVSYTPFATQVRGQGSEHK---EYSSVLHKALEGAILLESFPKTTVDVFALVME 147
            G L C    +PF+   R + +  +   E S V+ +ALE +++LE FP+T VDVF  V++
Sbjct: 72  TGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEALEPSLMLEQFPRTAVDVFIEVLQ 131

Query: 148 SGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEERWQDGSLMLTY 207
           + G      ++ AS+ALADAGI M D+V+A +   V  ++V+D   EE++     + + Y
Sbjct: 132 ADGGSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEEDQAGQADMPVGY 191

Query: 208 MPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCLKE 249
           MP   +VT + ++G  T  +      + +D CK++  + +  L +
Sbjct: 192 MPNLDQVTLIQLDGVLTPDEYSRCAAMAIDGCKQVYEVQKKALSD 236

[Close]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Match: RRP41_PYRFU (Exosome complex component Rrp41 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rrp41 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.700e-31
Identity = 85/234 (36.32%), Postives = 127/234 (54.27%), Query Frame = 1


		  
Query: 20  KPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRE-S 79
           KP+     D NG R DGR  Y+ RP  +K G +  A GSAY E+G  K+I +V+GPRE  
Sbjct: 4   KPEGLKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIH 63

Query: 80  KKAMMYSNVGRLNCSVSYTPFATQVR---GQGSEHKEYSSVLHKALEGAILLESFPKTTV 139
            K +   +   L    +  PF+ + R   G      E S V+  ALE A++LE FP+T +
Sbjct: 64  PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAI 123

Query: 140 DVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEERWQ 199
           DVF  V+++        I+ ASLALADAGI M DLVAA S   +   +V+D   EE+ + 
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDNYG 183

Query: 200 DGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCLKEE 250
           +  + +  MP ++++T L ++G  T  +  E ++L +   K +    R  LKE+
Sbjct: 184 EADVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEK 237

[Close]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Match: RRP41_PYRHO (Exosome complex component Rrp41 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rrp41 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.600e-31
Identity = 84/235 (35.74%), Postives = 128/235 (54.47%), Query Frame = 1


		  
Query: 19  KKPQKPTFNDSNGVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRE- 78
           +KP+     D NG R DGR  Y+ RP  +K G +  A GSAY E+G  K+I +V+GPRE 
Sbjct: 3   EKPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPREL 62

Query: 79  SKKAMMYSNVGRLNCSVSYTPFATQVR---GQGSEHKEYSSVLHKALEGAILLESFPKTT 138
             K +   +   L    +  PF+ + R   G      E S V+  ALE A++LE FP+T+
Sbjct: 63  HSKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTS 122

Query: 139 VDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEERW 198
           +DVF  V+++        I+ ASLALADAGI M DLVAA +   +   +V+D   EE+ +
Sbjct: 123 IDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNY 182

Query: 199 QDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCLKEE 250
            +  + +  MP ++++T L ++G  T  +  E + L +   K +    R  LKE+
Sbjct: 183 GEADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVRLAIKGAKAVYQKQREALKEK 237

[Close]

BLAST of Spo14481.1 vs. TAIR (Arabidopsis)
Match: AT4G27490.1 (3'-5'-exoribonuclease family protein)

HSP 1 Score: 341.7 bits (875), Expect = 4.000e-94
Identity = 174/254 (68.50%), Postives = 207/254 (81.50%), Query Frame = 1


		  
Query: 1   MSSRAGTTPSTYSPSTQKKKPQKPTFNDSN--GVRSDGRGFYQCRPAYLKTGAVSAAGGS 60
           M+++ G    TYSP    +  + P F DS+    R DGRGF+QCRPA L+TGAVS+A GS
Sbjct: 1   MAAKPGAATPTYSPKIVGRS-RLPIFKDSDLDWSRPDGRGFHQCRPALLQTGAVSSASGS 60

Query: 61  AYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNCSVSYTPFATQVRGQGSEHKEYSSVLH 120
           AYAEFGNTKVIVSVFGPRESKKAM+YS+VGRLNC+VSYT FA+   GQG++HKEYSS+LH
Sbjct: 61  AYAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSYTNFASPTLGQGTDHKEYSSMLH 120

Query: 121 KALEGAILLESFPKTTVDVFALVMESGGSDLPVIISCASLALADAGIMMYDLVAAVSLSC 180
           KALEG I++E+FPKTTVDVFALV+ESGGSDL V+ISCASLALADAGIMMYDL+ AVS+SC
Sbjct: 121 KALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSC 180

Query: 181 VGPSLVIDPVLEEERWQDGSLMLTYMPCRSEVTQLAVNGEWTTPKIHEGMELCLDACKKL 240
           +G SL+IDPV EEE  +DGS M+T MP R E+TQL + GEWTTP I+E M+LCLDA  KL
Sbjct: 181 IGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASSKL 240

Query: 241 AGIMRSCLKEEADS 253
             IMR CLK+ A +
Sbjct: 241 GEIMRDCLKQSASA 253

[Close]

BLAST of Spo14481.1 vs. TAIR (Arabidopsis)
Match: AT3G61620.1 (3'-5'-exoribonuclease family protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.100e-22
Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 1


		  
Query: 31  GVRSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSNVG 90
           G+R DGR F + R    + G VS A GSA  E GNTKVI +V+GPRE  +K     ++  
Sbjct: 8   GLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHA 67

Query: 91  RLNCSVSYTPFATQVRGQGSEHK---EYSSVLHKALEGAILLESFPKTTVDVFALVMESG 150
            + C  S   F+T  R +    +   E S V+ + +E  IL E  P + +D+F  V+++ 
Sbjct: 68  VVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQAD 127

Query: 151 GSDLPVIISCASLALADAGIMMYDLVAAVSLSCVGPSLVIDPVLEEERWQDGSLMLTYMP 210
           G      I+ A+LALADAGI M DL  + S   +  + ++D    E+      + +  +P
Sbjct: 128 GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILP 187

Query: 211 CRSEVTQLAVNGEWTTPKIHEGMELCLDACKKLAGIMRSCLKE 249
              +V+ L ++ +           L  + CK +A  +R  L+E
Sbjct: 188 KLDKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQE 230

[Close]

BLAST of Spo14481.1 vs. TAIR (Arabidopsis)
Match: AT3G46210.1 (Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.300e-12
Identity = 55/163 (33.74%), Postives = 77/163 (47.24%), Query Frame = 1


		  
Query: 33  RSDGRGFYQCRPAYLKTGAVSAAGGSAYAEFGNTKVIVSVFGPRESKKAMMYSNVGRLNC 92
           R DGR   Q RP       +    GSA    G+TKV+ +V+GP+   K     N  +   
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKN--ENAEKACF 64

Query: 93  SVSYTPFATQVRGQGSEHKEYSSVLHKALEGAILLESFPKTTVDVFALVMESGGSDLPVI 152
            V + P + Q+   G   KEY  +L + ++   +L   P TT  V   V+   GS LP  
Sbjct: 65  EVIWKPKSGQI---GKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCA 124

Query: 153 ISCASLALADAGIMMYDLVAAVSLSCVGPS--LVIDPVLEEER 194
           I+ A  AL DAGI M  L  A+   C+  +  LV+DP   EE+
Sbjct: 125 INAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEEK 161

The following BLAST results are available for this feature:

BLAST of Spo14481.1 vs. NCBI nr
BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
BLAST of Spo14481.1 vs. TAIR (Arabidopsis)

BLAST of Spo14481.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902168546\|gb\|KNA07517.1\|	2.7e-140	100.	hypothetical protein SOVF_1711...	[more]
gi\|731345724\|ref\|XP_010684069.1\|	5.4e-117	87.1	PREDICTED: exosome complex com...	[more]
gi\|719992923\|ref\|XP_010253724.1\|	9.0e-104	75.4	PREDICTED: exosome complex com...	[more]
gi\|225435349\|ref\|XP_002285257.1\|	9.9e-103	74.3	PREDICTED: exosome complex com...	[more]
gi\|590590598\|ref\|XP_007016781.1\|	7.1e-101	75.9	3'-5'-exoribonuclease family p...	[more]

BLAST of Spo14481.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QJU8_SPIOL	1.9e-140	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BXI2_BETVU	3.8e-117	87.1	Uncharacterized protein OS=Bet...	[more]
A5BI33_VITVI	6.9e-103	74.3	Putative uncharacterized prote...	[more]
A0A061GX12_THECC	5.0e-101	75.9	3'-5'-exoribonuclease family p...	[more]
G7JND2_MEDTR	4.2e-100	75.0	Exosome complex exonuclease RR...	[more]

BLAST of Spo14481.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RP41L_ARATH	7.1e-93	68.5	Exosome complex component RRP4...	[more]
EXOS6_DANRE	9.8e-34	36.6	Exosome complex component MTR3...	[more]
RRP41_CENSY	1.6e-31	33.7	Exosome complex component Rrp4...	[more]
RRP41_PYRFU	2.7e-31	36.3	Exosome complex component Rrp4...	[more]
RRP41_PYRHO	4.6e-31	35.7	Exosome complex component Rrp4...	[more]

BLAST of Spo14481.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G27490.1	4.0e-94	68.5	3'-5'-exoribonuclease family p...	[more]
AT3G61620.1	3.1e-22	31.3	3'-5'-exoribonuclease family p...	[more]
AT3G46210.1	2.3e-12	33.7	Ribosomal protein S5 domain 2-...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 41..165 score: 2.2
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 169..230 score: 3.
IPR015847	Exoribonuclease, phosphorolytic domain 2	unknown	SSF55666	Ribonuclease PH domain 2-like	coord: 167..249 score: 8.98
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 29..192 score: 7.09
IPR027408	PNPase/RNase PH domain	GENE3D	3.30.230.70		coord: 30..247 score: 5.3
None	No IPR available	PANTHER	PTHR11953	EXOSOME COMPLEX COMPONENT	coord: 17..251 score: 6.9E
None	No IPR available	PANTHER	PTHR11953:SF2	EXOSOME COMPLEX COMPONENT MTR3	coord: 17..251 score: 6.9E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048449	floral organ formation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009845	seed germination
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02330	0.66	Barchart \| Table
Spo02931	0.66	Barchart \| Table
Spo18784	0.66	Barchart \| Table
Spo06202	0.65	Barchart \| Table