Spo14447 (gene)

Overview
NameSpo14447
Typegene
OrganismSpinacia oleracea (Spinach)
Description(CCHC-type zinc knuckle protein) (DNA-binding protein)
Locationchr2 : 40229364 .. 40232465 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCACGCAGCAGGAGTCGAAGCAGAAGCCGTAGCCGGAGCAGGAGTCCTAGGGATCGTAGAATGCGATCTCCACGCTCTTCTTTTCGTGATGCTCCATTTAGGAGAGATGCACGTCGGGGTTTCAGGTGGTTTGATTTTAACAATGCTCTACAACTGTTTGTTGGGTTGTTTTCCTTTATAAGATGGAAAGATATGTGAAAATATATAGAGAAAAGATGCACAAATTGGGGTGTAGGGGCTGGGTGGGGAGAAAAGAAAGGGAAAGTGGTTGCTGTTGGTAGATGAGATGAATATTGAACTGATCAGACTTCCAAGAGCAGTTGCCTAAAGCTGTTTTTGCCAACATGAACCATCTTTTCCATTAAGTATCATATATGGTAGATGATGTGTTTTTTTTTTCAAAATTTGCACTATCCGTTTCCAGGTTATACGAGTATTAATTTGCGTCGGTGGTGACTGGTGAGATCTGATATGGCCACGTTCTTTTGAACTTATGGGTAAATCCTATCTTTTTTTCCAGCAGGATGAGTGAGGTGTGACCTACTTCTGATAATTAACAGTCTTGTATACTGGAGATTTGTGGAACATGAACCCGCGTCTTGTCCCTGATGATCAACAGCTGCTTCATTTTTTGAATTCTGTCAATTCTCTAAGAAATCTGTTTTTCATTCCCATATTTTTTTTGCATTACGATATGTTACTACTGTAGGTTTTGTGCTAGCTGTAGCTGTAGAGTCTTAAATCTCTTTTGTTCCTGGTACCACTTTGTTGGTTCATTCATTCTTCAGTTATTTTTCGTCCCCTATTGATCAAAGGGGATATCTAGCATAGTTTGATGAGCCTCAGGATTCCACTGAGGACATGTAGGGTTATTATTTTAAGAAGGCACTTTAGCCCATCTATTTCTTTCACGGACAATGTTTATTATTCCTCCTCGAGTAAGATAGAAAGGACTACTTATTGCTGGCTTACAACCTATTTCTTAGTTCCTTTCTGGTTTCAATTCTCTGATGTCAGGTCCAAATATTGTCGAGGAAGAGCACTTGAGTGGTAGAACATGGGTCTGTATAGAATTTCATAGATAAAGTTTGAGAAAATATTTTAATGTTCACAAATTTTCACAGTTGTTCTGCTAAGTTAGGACCTGGGAATCCCTAAAAAACAAGTTACAAATGTATTATCGGTATCATCAAACAAGTTTAGTAATCAAAAATGTATTATTATGTATGACCTCAAGTAGAATTGAGTTGGAGTCATGGAGAGATTATGTTGCGATAAGCCTATAACATTTTGTCTTTCTGTTAAGGTGGAAATGTAGAACCATTGGACCAATATTTGGGGCTATTAGCTGCTAAATTTATTTGATTATTAGTATTAATGTTCAACTTACATACGAAGTATATAATTTCTGTGAGACAGCTTCGATTCCAATGCAAAATTTTATGTTAGATTATCCCTGCTTTTAATCCTCAGTATCTTGGATGTCAGAAAATTTGGCTTCCCCCCTTGCATGAGCAACGTATGTGTAGCACATACAATTTGGGTGCTCTGTTTATGATTAGGTGGATTTTCTTACTGAACTTTGGACGCTAACTTCTGTTGGATACTTTTGCAGCCAAAGCAATCTCTGTAACAACTGCAAACAGCCTGGTCATTTTGCCAGAGAGTGTACAAATGTTGCTGTTTGCAACAACTGCGGGCTTCCTGGGTACTGATTTTCTGACCATCTATTTTGAACCTATAGTTTTTCATGCTTCCTTCAACTTCTGAAACTTATAAGAAAACAGAAAGATAATGTAAGGGGACTAATGATTGAATACATATCTAAGTGCAGGCATATTGCAGCCGAGTGCAGCACAAAATCTTTATGCTGGAACTGCCGTGAACCTGGGCATATGGCCAGCAACTGCTCAAATGAGGGCATCTGCCACTCATGTGGCAAAGCTGGGCACCGTGCTAGAGAGTGTACGAATCCTGAACTCCCTCCTGGTGACCTGAGACTCTGCAACAATTGCTTCAAACAAGGTCACGTTGCTGCGGAATGCACAAATGACAAGGCATGCAAGAATTGCAGGAAGACAGGACACCTTGCCCGTGACTGCTCCAATGAGCCTGTTTGTAACTTGTGCAATGTCGCAGGCCACGTGGCTAGGCAATGCCCTAAAGCCGATGTCCTTGGAGATCGGGGCAGTGGTGGCGGTTTCGGAGGAGGTGGTGGTCGTTATGGTGGTTTCGGAGGTGGTGGAGGGGGTCGTTATGGGGGTTTTGGAGGTGGTGGTGGTAGTCGTTATGGTGGTTTTGGAGGTGGTGGAGGAGGATACCCAATGGGAGGGGGTTATCGTGATATAAACTGCAGGAGCTGTGGGCAGATGGGACATATGAGTAGAGACTGCATGGGGGGTCCAGCTATGATTATCTGCCACACCTGTGGTGGTCGAGGACATATGTCTTTTGAATGCCCTTCAGGAAGAGTGATGGATCGTATGCCAAGGAGGTACTGAAATGGCATGTTATATTGATGGTGCTTTGGAGTTTGGATGCATGCATTACATGGAGATAGTAATTCTGAATAAAAACTCAGTACATTGTCTTGCCTTTTCATTTAGTTCGTCATTGATTTTTGACTTTGTAGTGACTTTTTTCGGCTTGTTTTTTGTTTCCCTGTTGAGAAGTTTAGAACCATTACATATTGGTTAGTGCGAATTATGCTGTTCTATTTTCTGTGCTGTTGTAGTATTTGATGCAAAATACACTATAGGGTTGATTTATTTTTGTGATTGGCATATGCATTTGTTCAGCTTCACTAGATGGTTTTACCGATGAAGTTGTAGACTTGAGAAAGGTCAAGATGCATCCTTAGTTGTGGCTTACAGATAAGGCCATTGGCCATCTTAATACGAAGTACAGACTACAGAGTATGAATTACAACAATAAGTATATCTTTAGACTCATGGAGTTGAAGTTAAACAGAGCCTATAGGCTAGAGGGTTGATACTTGTTAGTTCCTGCACTTGAATGGAACGGAATTTTATCCTGAAGTTGATAATGCACGTATAATTCATATTAATATGGTTATGCCTTGGTCATAATTTGCAT

mRNA sequence

ATGAGTTCACGCAGCAGGAGTCGAAGCAGAAGCCGTAGCCGGAGCAGGAGTCCTAGGGATCGTAGAATGCGATCTCCACGCTCTTCTTTTCGTGATGCTCCATTTAGGAGAGATGCACGTCGGGGTTTCAGCCAAAGCAATCTCTGTAACAACTGCAAACAGCCTGGTCATTTTGCCAGAGAGTGTACAAATGTTGCTGTTTGCAACAACTGCGGGCTTCCTGGGCATATTGCAGCCGAGTGCAGCACAAAATCTTTATGCTGGAACTGCCGTGAACCTGGGCATATGGCCAGCAACTGCTCAAATGAGGGCATCTGCCACTCATGTGGCAAAGCTGGGCACCGTGCTAGAGAGTGTACGAATCCTGAACTCCCTCCTGGTGACCTGAGACTCTGCAACAATTGCTTCAAACAAGGTCACGTTGCTGCGGAATGCACAAATGACAAGGCATGCAAGAATTGCAGGAAGACAGGACACCTTGCCCGTGACTGCTCCAATGAGCCTGTTTGTAACTTGTGCAATGTCGCAGGCCACGTGGCTAGGCAATGCCCTAAAGCCGATGTCCTTGGAGATCGGGGCAGTGGTGGCGGTTTCGGAGGAGGTGGTGGTCGTTATGGTGGTTTCGGAGGTGGTGGAGGGGGTCGTTATGGGGGTTTTGGAGGTGGTGGTGGTAGTCGTTATGGTGGTTTTGGAGGTGGTGGAGGAGGATACCCAATGGGAGGGGGTTATCGTGATATAAACTGCAGGAGCTGTGGGCAGATGGGACATATGAGTAGAGACTGCATGGGGGGTCCAGCTATGATTATCTGCCACACCTGTGGTGGTCGAGGACATATGTCTTTTGAATGCCCTTCAGGAAGAGTGATGGATCGTATGCCAAGGAGGTACTGAAATGGCATGTTATATTGATGGTGCTTTGGAGTTTGGATGCATGCATTACATGGAGATAGTAATTCTGAATAAAAACTCAGTACATTGTCTTGCCTTTTCATTTAGTTCGTCATTGATTTTTGACTTTGTAGTGACTTTTTTCGGCTTGTTTTTTGTTTCCCTGTTGAGAAGTTTAGAACCATTACATATTGGTTAGTGCGAATTATGCTGTTCTATTTTCTGTGCTGTTGTAGTATTTGATGCAAAATACACTATAGGGTTGATTTATTTTTGTGATTGGCATATGCATTTGTTCAGCTTCACTAGATGGTTTTACCGATGAAGTTGTAGACTTGAGAAAGGTCAAGATGCATCCTTAGTTGTGGCTTACAGATAAGGCCATTGGCCATCTTAATACGAAGTACAGACTACAGAGTATGAATTACAACAATAAGTATATCTTTAGACTCATGGAGTTGAAGTTAAACAGAGCCTATAGGCTAGAGGGTTGATACTTGTTAGTTCCTGCACTTGAATGGAACGGAATTTTATCCTGAAGTTGATAATGCACGTATAATTCATATTAATATGGTTATGCCTTGGTCATAATTTGCAT

Coding sequence (CDS)

ATGAGTTCACGCAGCAGGAGTCGAAGCAGAAGCCGTAGCCGGAGCAGGAGTCCTAGGGATCGTAGAATGCGATCTCCACGCTCTTCTTTTCGTGATGCTCCATTTAGGAGAGATGCACGTCGGGGTTTCAGCCAAAGCAATCTCTGTAACAACTGCAAACAGCCTGGTCATTTTGCCAGAGAGTGTACAAATGTTGCTGTTTGCAACAACTGCGGGCTTCCTGGGCATATTGCAGCCGAGTGCAGCACAAAATCTTTATGCTGGAACTGCCGTGAACCTGGGCATATGGCCAGCAACTGCTCAAATGAGGGCATCTGCCACTCATGTGGCAAAGCTGGGCACCGTGCTAGAGAGTGTACGAATCCTGAACTCCCTCCTGGTGACCTGAGACTCTGCAACAATTGCTTCAAACAAGGTCACGTTGCTGCGGAATGCACAAATGACAAGGCATGCAAGAATTGCAGGAAGACAGGACACCTTGCCCGTGACTGCTCCAATGAGCCTGTTTGTAACTTGTGCAATGTCGCAGGCCACGTGGCTAGGCAATGCCCTAAAGCCGATGTCCTTGGAGATCGGGGCAGTGGTGGCGGTTTCGGAGGAGGTGGTGGTCGTTATGGTGGTTTCGGAGGTGGTGGAGGGGGTCGTTATGGGGGTTTTGGAGGTGGTGGTGGTAGTCGTTATGGTGGTTTTGGAGGTGGTGGAGGAGGATACCCAATGGGAGGGGGTTATCGTGATATAAACTGCAGGAGCTGTGGGCAGATGGGACATATGAGTAGAGACTGCATGGGGGGTCCAGCTATGATTATCTGCCACACCTGTGGTGGTCGAGGACATATGTCTTTTGAATGCCCTTCAGGAAGAGTGATGGATCGTATGCCAAGGAGGTACTGA

Protein sequence

MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14447.1Spo14447.1mRNA


Homology
[Close]
BLAST of Spo14447.1 vs. NCBI nr
Match: gi|902239801|gb|KNA25734.1| (hypothetical protein SOVF_004200 [Spinacia oleracea])

HSP 1 Score: 590.1 bits (1520), Expect = 2.100e-165
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

		  

Query: 1   MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR 60
           MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR
Sbjct: 1   MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR 60

Query: 61  ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT 120
           ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT
Sbjct: 61  ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT 120

Query: 121 NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA 180
           NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA
Sbjct: 121 NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA 180

Query: 181 RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG 240
           RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG
Sbjct: 181 RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG 240

Query: 241 GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY
Sbjct: 241 GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 296
[Close]
BLAST of Spo14447.1 vs. NCBI nr
Match: gi|731312026|ref|XP_010672275.1| (PREDICTED: DNA-binding protein HEXBP [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 537.3 bits (1383), Expect = 1.600e-149
Identity = 274/300 (91.33%), Postives = 285/300 (95.00%), Query Frame = 1 

		  

Query: 3   SRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAREC 62
           SRSRSRSRSRSRSRSPRD  MRS R S+RDAP+RRDARRGFSQSNLCNNCKQPGHFAREC
Sbjct: 7   SRSRSRSRSRSRSRSPRDHGMRSERFSYRDAPYRRDARRGFSQSNLCNNCKQPGHFAREC 66

Query: 63  TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP 122
           TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP
Sbjct: 67  TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP 126

Query: 123 ELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQ 182
           ELPPGDLRLCNNCFKQGHVAAECTN+KACKNCRKTGHLARDC+NEPVCNLCNV+GHVARQ
Sbjct: 127 ELPPGDLRLCNNCFKQGHVAAECTNEKACKNCRKTGHLARDCTNEPVCNLCNVSGHVARQ 186

Query: 183 CPKADVLGDRGSGG-GFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGF---GGGGGGYP 242
           CPKAD+LG+RG G    GGGGGRYGGFGGGGGGRYGGFGGGGG RYGGF   GGGGGG+P
Sbjct: 187 CPKADILGERGGGSIAAGGGGGRYGGFGGGGGGRYGGFGGGGGGRYGGFGGGGGGGGGFP 246

Query: 243 M--GGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           M  GGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMS+ECPSGR+M+RMPRRY
Sbjct: 247 MGGGGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSYECPSGRMMERMPRRY 306
[Close]
BLAST of Spo14447.1 vs. NCBI nr
Match: gi|593267495|ref|XP_007135925.1| (hypothetical protein PHAVU_009G003600g [Phaseolus vulgaris])

HSP 1 Score: 424.9 bits (1091), Expect = 1.200e-115
Identity = 210/292 (71.92%), Postives = 240/292 (82.19%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+RDAP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTNDKAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+VLGDR SGGG                   GG GGGGG+R GG          GGGYR
Sbjct: 183 KANVLGDR-SGGG-------------------GGGGGGGGARGGG----------GGGYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 262
[Close]
BLAST of Spo14447.1 vs. NCBI nr
Match: gi|950977305|ref|XP_014501462.1| (PREDICTED: zinc finger protein GIS2 [Vigna radiata var. radiata])

HSP 1 Score: 422.5 bits (1085), Expect = 5.900e-115
Identity = 203/292 (69.52%), Postives = 235/292 (80.48%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+RDAP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTN+KAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+V+GDR SGGG                         GG+R GG          GGGYR
Sbjct: 183 KANVIGDRSSGGG-------------------------GGARGGG----------GGGYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 257
[Close]
BLAST of Spo14447.1 vs. NCBI nr
Match: gi|1012353741|gb|KYP64929.1| (DNA-binding protein HEXBP [Cajanus cajan])

HSP 1 Score: 422.2 bits (1084), Expect = 7.700e-115
Identity = 204/292 (69.86%), Postives = 236/292 (80.82%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+R+AP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYREAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTN+KAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+VLGDR  GGG GGGGG                   GG+R             GG YR
Sbjct: 183 KANVLGDRSGGGGGGGGGG-------------------GGAR-------------GGSYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 260
[Close]
BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3E2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_004200 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 1.500e-165
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

		  

Query: 1   MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR 60
           MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR
Sbjct: 1   MSSRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAR 60

Query: 61  ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT 120
           ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT
Sbjct: 61  ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT 120

Query: 121 NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA 180
           NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA
Sbjct: 121 NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA 180

Query: 181 RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG 240
           RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG
Sbjct: 181 RQCPKADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMG 240

Query: 241 GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY
Sbjct: 241 GGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 296
[Close]
BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D495_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006190 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 1.100e-149
Identity = 274/300 (91.33%), Postives = 285/300 (95.00%), Query Frame = 1 

		  

Query: 3   SRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFAREC 62
           SRSRSRSRSRSRSRSPRD  MRS R S+RDAP+RRDARRGFSQSNLCNNCKQPGHFAREC
Sbjct: 7   SRSRSRSRSRSRSRSPRDHGMRSERFSYRDAPYRRDARRGFSQSNLCNNCKQPGHFAREC 66

Query: 63  TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP 122
           TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP
Sbjct: 67  TNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNP 126

Query: 123 ELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQ 182
           ELPPGDLRLCNNCFKQGHVAAECTN+KACKNCRKTGHLARDC+NEPVCNLCNV+GHVARQ
Sbjct: 127 ELPPGDLRLCNNCFKQGHVAAECTNEKACKNCRKTGHLARDCTNEPVCNLCNVSGHVARQ 186

Query: 183 CPKADVLGDRGSGG-GFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGF---GGGGGGYP 242
           CPKAD+LG+RG G    GGGGGRYGGFGGGGGGRYGGFGGGGG RYGGF   GGGGGG+P
Sbjct: 187 CPKADILGERGGGSIAAGGGGGRYGGFGGGGGGRYGGFGGGGGGRYGGFGGGGGGGGGFP 246

Query: 243 M--GGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           M  GGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMS+ECPSGR+M+RMPRRY
Sbjct: 247 MGGGGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSYECPSGRMMERMPRRY 306
[Close]
BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Match: V7AQT1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G003600g PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.300e-116
Identity = 210/292 (71.92%), Postives = 240/292 (82.19%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+RDAP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTNDKAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+VLGDR SGGG                   GG GGGGG+R GG          GGGYR
Sbjct: 183 KANVLGDR-SGGG-------------------GGGGGGGGARGGG----------GGGYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 262
[Close]
BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Match: A0A151TCZ7_CAJCA (DNA-binding protein HEXBP OS=Cajanus cajan GN=KK1_019542 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 5.400e-115
Identity = 204/292 (69.86%), Postives = 236/292 (80.82%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+R+AP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYREAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTN+KAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+VLGDR  GGG GGGGG                   GG+R             GG YR
Sbjct: 183 KANVLGDRSGGGGGGGGGG-------------------GGAR-------------GGSYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 260
[Close]
BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UHB1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g249800 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 9.100e-115
Identity = 205/292 (70.21%), Postives = 237/292 (81.16%), Query Frame = 1 

		  

Query: 5   SRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDARRGFSQSNLCNNCKQPGHFARECTN 64
           S SRSRSRSRSRSP DR++RS R S+RDAP+RRD+RRGFS+ NLC NCK+PGH+AREC N
Sbjct: 3   SDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPN 62

Query: 65  VAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECTNPEL 124
           VA+C+NCGLPGHIA+EC+TKSLCWNC+EPGHMASNC NEGICH+CGKAGHRARECT P +
Sbjct: 63  VAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPM 122

Query: 125 PPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVARQCP 184
           PPGDLRLCNNC+KQGH+AAECTN+KAC NCRKTGHLARDC N+P+CNLCNV+GHVARQCP
Sbjct: 123 PPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 182

Query: 185 KADVLGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPMGGGYR 244
           KA+V+GDR  GGG                        GGG+R    GGGG     GGGYR
Sbjct: 183 KANVIGDRSGGGG------------------------GGGAR----GGGG-----GGGYR 242

Query: 245 DINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
           D+ CR+C Q+GHMSRDCMG   ++ICH CGGRGH+++ECPSGR MDR PRRY
Sbjct: 243 DVICRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 259
[Close]
BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Match: GIS2_YEAST (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIS2 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.900e-23
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 1 

		  

Query: 49  CNNCKQPGHFARECTNVAVCNNCGLPGHIAAECSTKSL-----CWNCREPGHMASNCSNE 108
           C  C + GH A +C +  +C NC  PGH+  +C+         C+NC E GH+ S C+ +
Sbjct: 6   CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65

Query: 109 GICHSCGKAGHRARECTNPELPPGDLRL-CNNCFKQGHVAAECTNDKA-----CKNCRKT 168
             C +C + GH +REC  P+      ++ C  C    H+A +C  +       C  C + 
Sbjct: 66  R-CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQA 125

Query: 169 GHLARDCSNEPVCNLCNVAGHVARQCPKA 187
           GH++RDC N+ +C  CN  GH+++ CPKA
Sbjct: 126 GHMSRDCQNDRLCYNCNETGHISKDCPKA 153
[Close]
BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Match: BYR3_SCHPO (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr3 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.300e-17
Identity = 52/137 (37.96%), Postives = 68/137 (49.64%), Query Frame = 1 

		  

Query: 68  CNNCGLPGHIAAECSTKSLCWNCREPGHMASNCS---NEGICHSCGKAGHRARECTNPEL 127
           C NCG  GH A EC+  S+C+NC + GH AS C+    E  C++CG AGH  R+C  P  
Sbjct: 19  CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDC--PSS 78

Query: 128 P-PGDLRLCNNCFKQGHVAAEC-TNDKA-------------CKNCRKTGHLARDCSNEPV 187
           P P     C  C + GH+A +C TN +              C  C   GH ARDC+    
Sbjct: 79  PNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK 138
[Close]
BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Match: GLH4_CAEEL (ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans GN=glh-4 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 4.200e-12
Identity = 37/109 (33.94%), Postives = 52/109 (47.71%), Query Frame = 1 

		  

Query: 49  CNNCKQPGHFARECTNVAV----CNNCGLPGHIAAECSTKSL----CWNCREPGHMASNC 108
           C+NC + GH ++EC    V    C NC   GH A++C    +    C NC   GH A +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631

Query: 109 SN----EGICHSCGKAGHRARECTNPELPPGDLRLCNNCFKQGHVAAEC 146
                  G C +CG+ GH A++C N  +       C  C ++GH   EC
Sbjct: 632 DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
[Close]
BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Match: AIR1_SCHPO (Protein air1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=air1 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.100e-7
Identity = 36/121 (29.75%), Postives = 56/121 (46.28%), Query Frame = 1 

		  

Query: 44  SQSNLCNNCKQPGHFARECTNVAVCNNCG-LPGHIAAECSTKSLCWNCREPGHMASNCS- 103
           S+S +C+NCK  GH +++C +V +C  CG +  HI+  C     C NC   GH+A+ CS 
Sbjct: 86  SESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE 145

Query: 104 ----NEGICHSCGKAGHRAREC----------TNP-ELPPGDLR-LCNNCFKQGHVAAEC 147
                  +C +C    H +  C           +P  +   ++R  C NC    H   +C
Sbjct: 146 PRKRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDEHFGDDC 205
[Close]
BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Match: GAG_FIVSD (Gag polyprotein OS=Feline immunodeficiency virus (strain San Diego) GN=gag PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.300e-7
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 1 

		  

Query: 48  LCNNCKQPGHFARECTNVAVCNNCGLPGHIAAEC 82
           +C NCK+PGH AR+C +V  CN CG PGH+AA+C
Sbjct: 376 VCFNCKKPGHLARQCRDVKKCNKCGKPGHLAAKC 409
[Close]
BLAST of Spo14447.1 vs. TAIR (Arabidopsis)
Match: AT1G75560.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 304.7 bits (779), Expect = 6.300e-83
Identity = 175/297 (58.92%), Postives = 200/297 (67.34%), Query Frame = 1 

		  

Query: 3   SRSRSRSRSRSRSRSPRDRRMRSPRSSFRDAPFRRDA--RRGFSQSNLCNNCKQPGHFAR 62
           SRSRSRSR R RSRSPRDRRMRS R S+ DAP RR+   RR FSQ NLCNNCK+PGHFAR
Sbjct: 9   SRSRSRSRDRFRSRSPRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFAR 68

Query: 63  ECTNVAVCNNCGLPGHIAAECSTKSLCWNCREPGHMASNCSNEGICHSCGKAGHRARECT 122
           +C+NV+VCNNCGLPGHIAAEC+ +S CWNCREPGH+ASNCSNEGICHSCGK+GHRAR+C+
Sbjct: 69  DCSNVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGICHSCGKSGHRARDCS 128

Query: 123 NPELPPGDLRLCNNCFKQGHVAAECTNDKACKNCRKTGHLARDCSNEPVCNLCNVAGHVA 182
           N +   GDLRLCNNCFKQGH+AA+CTNDKACKNCR +GH+ARDC N+PVCN+C+++GHVA
Sbjct: 129 NSDSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNICSISGHVA 188

Query: 183 RQCPKADV-LGDRGSGGGFGGGGGRYGGFGGGGGGRYGGFGGGGGSRYGGFGGGGGGYPM 242
           R CPK D    DRGS                    R GG   GG SR      G      
Sbjct: 189 RHCPKGDSNYSDRGS------------------RVRDGGMQRGGLSRMSRDREGVSAM-- 248

Query: 243 GGGYRDINCRSCGQMGHMSRDCMGGPAMIICHTCGGRGHMSFECPSGRVMDRMPRRY 297
                 I C +CG                      GRGH ++ECPS RV DR  RRY
Sbjct: 249 ------IICHNCG----------------------GRGHRAYECPSARVADRGFRRY 257
The following BLAST results are available for this feature:
BLAST of Spo14447.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239801|gb|KNA25734.1|2.1e-165100.hypothetical protein SOVF_0042... [more]
gi|731312026|ref|XP_010672275.1|1.6e-14991.3PREDICTED: DNA-binding protein... [more]
gi|593267495|ref|XP_007135925.1|1.2e-11571.9hypothetical protein PHAVU_009... [more]
gi|950977305|ref|XP_014501462.1|5.9e-11569.5PREDICTED: zinc finger protein... [more]
gi|1012353741|gb|KYP64929.1|7.7e-11569.8DNA-binding protein HEXBP [Caj... [more]
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BLAST of Spo14447.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S3E2_SPIOL1.5e-165100.Uncharacterized protein OS=Spi... [more]
A0A0J8D495_BETVU1.1e-14991.3Uncharacterized protein OS=Bet... [more]
V7AQT1_PHAVU8.3e-11671.9Uncharacterized protein OS=Pha... [more]
A0A151TCZ7_CAJCA5.4e-11569.8DNA-binding protein HEXBP OS=C... [more]
A0A0L9UHB1_PHAAN9.1e-11570.2Uncharacterized protein OS=Pha... [more]
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BLAST of Spo14447.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GIS2_YEAST6.9e-2334.2Zinc finger protein GIS2 OS=Sa... [more]
BYR3_SCHPO3.3e-1737.9Cellular nucleic acid-binding ... [more]
GLH4_CAEEL4.2e-1233.9ATP-dependent RNA helicase glh... [more]
AIR1_SCHPO1.1e-729.7Protein air1 OS=Schizosaccharo... [more]
GAG_FIVSD5.3e-761.7Gag polyprotein OS=Feline immu... [more]
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BLAST of Spo14447.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G75560.16.3e-8358.9zinc knuckle (CCHC-type) famil... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 254..285
score: 3.3E-10coord: 76..94
score: 2.5E-11coord: 159..185
score: 8.4E-11coord: 114..139
score: 5.9E-10coord: 95..113
score: 2.1E-11coord: 49..75
score: 2.5E-10coord: 140..158
score: 1.3E-10coord: 243..253
score: 4.0
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 87..101
score: 1.1E-5coord: 150..165
score: 2.5E-5coord: 67..82
score: 1.5E-4coord: 48..64
score: 1.4E-6coord: 105..121
score: 6.9E-5coord: 247..261
score: 2.7E-6coord: 169..185
score: 0.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 105..121
score: 0.0018coord: 169..185
score: 0.012coord: 67..83
score: 0.0055coord: 150..166
score: 0.004coord: 247..263
score: 0.0038coord: 86..102
score: 5.7E-4coord: 131..147
score: 0.01coord: 269..285
score: 0.0046coord: 48..64
score: 1.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 270..285
score: 9.257coord: 106..121
score: 10.032coord: 68..81
score: 9.142coord: 151..166
score: 9.438coord: 49..64
score: 9.372coord: 170..185
score: 8.581coord: 87..102
score: 9.554coord: 248..261
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 85..122
score: 1.03E-9coord: 126..167
score: 2.17E-10coord: 238..287
score: 1.28E-11coord: 41..84
score: 1.4
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 1..193
score: 1.1E-134coord: 241..290
score: 1.1E
NoneNo IPR availablePANTHERPTHR23002:SF65SUBFAMILY NOT NAMEDcoord: 241..290
score: 1.1E-134coord: 1..193
score: 1.1E
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 268..288
score: 2.6E-5coord: 131..147
score: 0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006412 translation
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0006417 regulation of translation
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0042742 defense response to bacterium
biological_process GO:0007017 microtubule-based process
biological_process GO:0051258 protein polymerization
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009308 amine metabolic process
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009987 cellular process
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0044425 membrane part
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005634 nucleus
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
cellular_component GO:0005773 vacuole
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0048046 apoplast
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0044424 intracellular part
cellular_component GO:0005777 peroxisome
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0017069 snRNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
RNA-Seq Expression