Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATATGATTTTGGTCGATTTCTCAAGTCTCCTCATTTTTACTCATGTTATGACAAAAAGGGCTGAATTCAAAATAGCCAGAGTCCATGTAGCAATTCGGCCCAAAAAATCAAATACTAGCCATAGGCTAAAAAAAAAGCCTAAAACCGAACAATGAGAACCCAATTCAACAACCGAACAACGATAATCCATTTTGGTTCCAGTTCAACAATTTCAACAGTGCAAGAGAGAGAAAGCTTAGAATCAACGCCAACGAAAGGCGAAAATGGTGACCTTTAACCTGATGATCACTGCTGAGGTCGACAATGTTTCCAGCATTCAGCCTATGGGCGGTTGCGATGATCCTAACTTCACTTACTACTTTAAGGTTTTCCTTTCTCTTTCTACCTCTATGATTTTTGTGTTATTTTACTTGTACCCGCTTGAGCGGTTGTGGGTGTTTGATTTGTACCCACCACCATGGCTAATAGGTAGTTTGGGACTTTGGGGAATGGGGGTATTCGTATTCGCATCTAACCCGCCTCATTGCAATCCCCAGAACTCATAATTTTGGAGCTGAATTTGATTTATTGCCATTCAATTTGTGTTTTTGCAGCTGAAATGTGGGAATTGTGGAGAGGTGACTGAGAAGGAGACTTATGTGGTGTTGGGAGAGGTTGTTCCTATTCCTAAGAGTCGCGGCAATGCTAATCTCGTCCAGAAGGTTTATCTCTATATCTCTAATAAGCTACTCCTATTGTTCTATTATGATTTGGTTGTACTCTATCTTCTAGGATTAATTGTCACTTTGATACTTGTTAGTGGTATTTGAACCGGTAATGTCACAACTGAATCCGGGTGGAGGTAGTATTTTGCATAGTCTGGCCTTAAAAGGTGTGTTATCTATAAGCTGATGAGTGTTTATAAAGTCCATTTTTATAGCAAGTGAGGAATCTAATTGTGAAAGGAAGTGTTTCAAAGTGATTGAGAATTTGTAGCATTTAGGAGCTTTAATTTTCGCCAATGTACTAGACATGAGTTGAATGACCCTGAGTTTGAAATGAGTTGAATTTGTAGCAATTAGGAGCTTTAATTTTCCTCTCCCGGGGTTGTCAAGAAATCGGTTCCTGCTGCCTCAATTAATATTTGGTTTATGTAAAAATAAGAAATGGGAATCGGGCAACAATGGAACAAGTTCTCCCCAGAAGAAGAAGGGGCCGTAATGAAAAAGTATTTGGGAAGGTACTGTATATCGTTTTTGTTTAAGGGCTGATTGATCTACCGAAATACCAGTTATCTCTCCAGGGAAAGAGAACACATAAGGACTCCCCAGCCCTCCCATTACAGATTCACAACCTTGAGAAAAGGCATACCTAATTCTGTCTCGTTTTATAACAGATGAACATAAGATAATGTTCAAGTTTGATACTTCGTATAAAAAATTGATTTCTCAGGATAATTTATTCTGAACTTGCCTAATATGTCTTATGTTAGGCACTTGGGGAATGAATTCTTGAATTTGTGCCAGTTTTGTAGTTAGCTAATAGGAACAAGTGCAATTCTGTAATTGGCTAATAGGATTAATTGTGCTAGTTTCGTAGTTGGCTAATAGTATTAGTTTTGCTTGTTCTGTAGTTGGCTAATAGGAGTCTTTTATTTACCATTCATTCATTCATTTTCTTACAATTAACATCTTTTTCAATAATGGTGTGCTGATTGTAGTGATATTTGGTTGTGCTTCGTTGCAAAAGCCGTACTCCTAAATAAGCCTAGATGTCATGTGGCTATCGAGTGAGCTTAATCTGCATGAGTCGATGAGTCGTGTATTGCCTTTCCAATTTTTATACGAATTACACTTAACCGACACTTGTTTCCTATACTTTATATATGTAGAAATATTCTGAGTTGTTAAACTTGTTCCCTTCCTTCAATAAAAAAAGCTATATTGTTTTTCTGTGATACTGCCTACTAAATTTTTGGTTTTCCAACTCTGATGACGGTGATTGCTAATGAATCGACCCTTTATTATCTCAGTGCAAGTTATGCGGTAGGGATGGTACTATTACGATGATACCAAAATCTGGCCGCCCTCTAACCGGTGATGACTGTGAAGAAGGAAAGTATGCCCCTATGATGAGCTTTGATTGCCGGGGTTTGGAGCCAGTGGCCTACTCCTTTGGTGGTGATCAGTGGAAAATTGTAACTGTAAGTCTTTCTTGTGTGGTTTGTTTAACGAAATTTGCTAGATTCATCCATTGTTTGGTAGCATGTGAAGCACTTCAAATTCTTTATGCAATACCCATATTGTTTACTTTTTCATGTGATGGTAGTTTCTGTAGGCATAACATTTGGGCTGTTGTGTTTTCCTCATGCCAACATCACCATGAATACCCCTTCCCCTCCATTGCTTCACCCTGTGCTCATCTGTACTAGTCAATCATGTCTCATGTCAATAGGATAAGCTTACTTATCATTGATGTGGGGCCTCAGTGATGTACCTAATTGTGACTGTTTCTCGCTCTCTGCACGAGCTTTTGTCTATGGAAGGATAGCAATCTGCTGGTTTTCCCATATAAGTTTGGGAGAAATACTTTTGAAAATGACATTGTTGTTAGATTGTTTTTTCTTTTGAGTTTATATGCCATCTATACTTTAGTGCTTTTCTGATATAAGCCTAGTCTTATTTGTACAGACTGCTGGCACTGTGTTTGAGAACGTGGACCTGTCGGATGGGGATTGGGCTGATTATGATGAAAAAGGGAAAATGCCAACTTCAATCAGCAACCTGCAATCACGTTTTGATGTGGTGAAGACATAAACCAGAGTTTGTGGGGGAGAGGGGAAGGAGTGTAGATGGCGGTACCCAGACACTGACGAAACGAAGTGTGAATTGAACTGGTACATAAAAAACGTATAAAGATTACCAAAAAAAGTCTTTGCTAATGTAGTAATGTAAGTCAGCTTAGTACAGCTTGATAACTGCATTCTGTTTCTTGGTTACCAGAACTTGTATCTCCCCAAATGCTTGGTCTTTGCTGGCTTTGATGCTATGTGAAATGGTTGGTGCAGTGCAACTGCTAATTCCGGTTTTTCCTTGCAGAGAATATATTTTATAGCATCAATCCATGATTTTTTGTTTTCGAGTCTTTTGTCGTATAAAAAACGTTCCATTAAAATGTTTTTGCTGCCAAGAATTCTTTTGATATGCTTGAAACTCTTTTTTTTTCTGAGGTAAATGAAGGGCTGTAAGGAATTCGAAGTAAAAAAAAGTCATTTTAAAGATGGATTGATTTCTATTCTTGTATGCTACACCATATTGTATTGTCCAGTTCTGTGAAATCAGAGAGTGCTTCCTCTGCGTTTTTCATGGTTTTCAAGGAATGCACCGCGCAAAGGCATGTTGTTTTGTTTTAGTGGTTAATGGATTAACGAGATTTTTTTTTGTTTCAT AAAATATGATTTTGGTCGATTTCTCAAGTCTCCTCATTTTTACTCATGTTATGACAAAAAGGGCTGAATTCAAAATAGCCAGAGTCCATGTAGCAATTCGGCCCAAAAAATCAAATACTAGCCATAGGCTAAAAAAAAAGCCTAAAACCGAACAATGAGAACCCAATTCAACAACCGAACAACGATAATCCATTTTGGTTCCAGTTCAACAATTTCAACAGTGCAAGAGAGAGAAAGCTTAGAATCAACGCCAACGAAAGGCGAAAATGGTGACCTTTAACCTGATGATCACTGCTGAGGTCGACAATGTTTCCAGCATTCAGCCTATGGGCGGTTGCGATGATCCTAACTTCACTTACTACTTTAAGCTGAAATGTGGGAATTGTGGAGAGGTGACTGAGAAGGAGACTTATGTGGTGTTGGGAGAGGTTGTTCCTATTCCTAAGAGTCGCGGCAATGCTAATCTCGTCCAGAAGTGCAAGTTATGCGGTAGGGATGGTACTATTACGATGATACCAAAATCTGGCCGCCCTCTAACCGGTGATGACTGTGAAGAAGGAAAGTATGCCCCTATGATGAGCTTTGATTGCCGGGGTTTGGAGCCAGTGGCCTACTCCTTTGGTGGTGATCAGTGGAAAATTGTAACTACTGCTGGCACTGTGTTTGAGAACGTGGACCTGTCGGATGGGGATTGGGCTGATTATGATGAAAAAGGGAAAATGCCAACTTCAATCAGCAACCTGCAATCACGTTTTGATGTGGTGAAGACATAAACCAGAGTTTGTGGGGGAGAGGGGAAGGAGTGTAGATGGCGGTACCCAGACACTGACGAAACGAAGTGTGAATTGAACTGAACTTGTATCTCCCCAAATGCTTGGTCTTTGCTGGCTTTGATGCTATGTGAAATGGTTGGTGCAGTGCAACTGCTAATTCCGGTTTTTCCTTGCAGAGAATATATTTTATAGCATCAATCCATGATTTTTTGTTTTCGAGTCTTTTGTCGTATAAAAAACGTTCCATTAAAATGTTTTTGCTGCCAAGAATTCTTTTGATATGCTTGAAACTCTTTTTTTTTCTGAGGTAAATGAAGGGCTGTAAGGAATTCGAAGTAAAAAAAAGTCATTTTAAAGATGGATTGATTTCTATTCTTGTATGCTACACCATATTGTATTGTCCAGTTCTGTGAAATCAGAGAGTGCTTCCTCTGCGTTTTTCATGGTTTTCAAGGAATGCACCGCGCAAAGGCATGTTGTTTTGTTTTAGTGGTTAATGGATTAACGAGATTTTTTTTTGTTTCAT ATGGTGACCTTTAACCTGATGATCACTGCTGAGGTCGACAATGTTTCCAGCATTCAGCCTATGGGCGGTTGCGATGATCCTAACTTCACTTACTACTTTAAGCTGAAATGTGGGAATTGTGGAGAGGTGACTGAGAAGGAGACTTATGTGGTGTTGGGAGAGGTTGTTCCTATTCCTAAGAGTCGCGGCAATGCTAATCTCGTCCAGAAGTGCAAGTTATGCGGTAGGGATGGTACTATTACGATGATACCAAAATCTGGCCGCCCTCTAACCGGTGATGACTGTGAAGAAGGAAAGTATGCCCCTATGATGAGCTTTGATTGCCGGGGTTTGGAGCCAGTGGCCTACTCCTTTGGTGGTGATCAGTGGAAAATTGTAACTACTGCTGGCACTGTGTTTGAGAACGTGGACCTGTCGGATGGGGATTGGGCTGATTATGATGAAAAAGGGAAAATGCCAACTTCAATCAGCAACCTGCAATCACGTTTTGATGTGGTGAAGACATAA MVTFNLMITAEVDNVSSIQPMGGCDDPNFTYYFKLKCGNCGEVTEKETYVVLGEVVPIPKSRGNANLVQKCKLCGRDGTITMIPKSGRPLTGDDCEEGKYAPMMSFDCRGLEPVAYSFGGDQWKIVTTAGTVFENVDLSDGDWADYDEKGKMPTSISNLQSRFDVVKT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14414.1 vs. NCBI nr
Match: gi|902233482|gb|KNA23077.1| (hypothetical protein SOVF_028210 [Spinacia oleracea]) HSP 1 Score: 360.9 bits (925), Expect = 1.200e-96 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Spo14414.1 vs. NCBI nr
Match: gi|731317499|ref|XP_010669152.1| (PREDICTED: UPF0587 protein C1orf123 homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 295.8 bits (756), Expect = 4.700e-77 Identity = 133/168 (79.17%), Postives = 148/168 (88.10%), Query Frame = 1
BLAST of Spo14414.1 vs. NCBI nr
Match: gi|821324896|ref|NP_001295623.1| (UPF0587 protein C1orf123 homolog [Jatropha curcas]) HSP 1 Score: 236.5 bits (602), Expect = 3.400e-59 Identity = 104/167 (62.28%), Postives = 132/167 (79.04%), Query Frame = 1
BLAST of Spo14414.1 vs. NCBI nr
Match: gi|950986502|ref|XP_014503583.1| (PREDICTED: UPF0587 protein C1orf123 homolog [Vigna radiata var. radiata]) HSP 1 Score: 234.2 bits (596), Expect = 1.700e-58 Identity = 101/167 (60.48%), Postives = 132/167 (79.04%), Query Frame = 1
BLAST of Spo14414.1 vs. NCBI nr
Match: gi|747040731|ref|XP_011095622.1| (PREDICTED: UPF0587 protein C1orf123 homolog [Sesamum indicum]) HSP 1 Score: 233.8 bits (595), Expect = 2.200e-58 Identity = 103/167 (61.68%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RW51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028210 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 8.300e-97 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWI0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033080 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.300e-77 Identity = 133/168 (79.17%), Postives = 148/168 (88.10%), Query Frame = 1
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Match: D6BRE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07701 PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.400e-59 Identity = 104/167 (62.28%), Postives = 132/167 (79.04%), Query Frame = 1
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Match: A0A059CLE0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00632 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 3.400e-58 Identity = 103/167 (61.68%), Postives = 131/167 (78.44%), Query Frame = 1
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Match: A0A0L9V2B9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g259800 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.900e-57 Identity = 100/167 (59.88%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Match: CA123_XENLA (UPF0587 protein C1orf123 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.300e-29 Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Match: CA123_BOVIN (UPF0587 protein C1orf123 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.000e-28 Identity = 59/163 (36.20%), Postives = 98/163 (60.12%), Query Frame = 1
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Match: CA123_MOUSE (UPF0587 protein C1orf123 homolog OS=Mus musculus PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.000e-28 Identity = 58/158 (36.71%), Postives = 97/158 (61.39%), Query Frame = 1
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Match: CA123_RAT (UPF0587 protein C1orf123 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.900e-28 Identity = 58/158 (36.71%), Postives = 97/158 (61.39%), Query Frame = 1
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Match: CA123_HUMAN (UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.500e-27 Identity = 55/158 (34.81%), Postives = 96/158 (60.76%), Query Frame = 1
BLAST of Spo14414.1 vs. TAIR (Arabidopsis)
Match: AT4G32930.2 (unknown protein) HSP 1 Score: 195.3 bits (495), Expect = 3.100e-50 Identity = 92/176 (52.27%), Postives = 118/176 (67.05%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14414.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14414.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14414.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14414.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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