Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGCATTTTTCCAGGAATAAAAATTAAACTTGTTTTTTTTCCATATATAAAATATATTTATATTTTGTGATAATATTAAGATCGATGGGAATTAGTTCATCAGCTCCAATTGCAGTAATTCCAGAGGGTCTTGGGAGTGTGATTTATGATCAAGATGGTATGAAGATTAATCACCAGATTAATTCTGGGATGTCGATTCATTCTCAACGAGGTTGCAAGGCTGTTAATCAAGATTGTGCTGTTCTTTGTCAGGTATTTTAAGTTTTTTGCTCATTTTATTTGGTCAACTTATGCCATATTTAGATATTCTATTTATAGATCAATTTTGGGAATTCTTGGTACATCCGAATGTACAATGGAAATTATACGTACGGAGTAGTAGAGTTGATTTGTGAAACATGATTTCAGACTTTTGTTTTGTGAAATGTATTTTTTGAATAGAATGATGATGATACAGAGTTTGAATCACAGATTGTTAACGATCTTTAACATTTAATTAGTAACGTGTATAATTAGTTACCTTAACTATAGCCTAGAATTACTCTTGTAATCGATTGATTTCATTGACTAACATGGATTACAACTTACAAGAGTGATTATAGACTATAATTAAGGATTTAAGGTAACTAATTATACACCTACTAAATACAAAAAAATTACTAATTAGTATGTATTAGGTGTATAATTAATTACTTTAACTATTCATATTTATATACAATATATTCGATTACTGTGTACTCCCTCCATCCACATCGAGTTACGTAGTCGCGTAAATAAAGTAGTCGAACTCTCGAAAGGTTGTCATCTTTCCTAGATTAATCGAGAAGTGTTAATGGTTATTGTTCATGTTGGTAATCCATTTTCCGTATTCCAAACATAGATATTAGGGATAATACCATGCATTGAACAAGTATACACGAATTCAACATTTGGTTGAATTAATTGTTCATGTCTTCAAAATTTTGGCTCATATTTTTGTTTTGGACTGAAACAAAGAGCAAATATGAGCTGAGGTATAGATTTGGACTATGTCTTCTGGTGGGCCTCTTAACGGGCTTGAGCTTGCGCACCACTTTTAGGCCGAACATATAAAATTATCTGGCCGTAGTCCGTAGTACAGTAAAGCGGATTACCACTTTCACTTTAAAAATAAGAGTAATGATATATGCAACTCTTAGCTTCCTAAATAATTATTTACTGTGTTTTTCAAATTGAAATTAATTTAAAAATCTGTGTCAAAATTATGCGATGATTGGTGCAATTAATTTTTTTTACGGGGAAATGTCATTAAAAATTTACTCTGTAATATTTAGTAGAAATTACGGAGTATAAGCTAAAGTTTTCATTTTTAGAGTCTTCTATATAGCCCTAAGAGATGAATATATCATTTTCTTAACAATATCAGATCGAGTAGGAAGTGATTCGTATTTACCTAAAATACAAATAAATAGATCATTTCATATCAAACCGTCTGAAAATTAATTAATTGTTAAACTAGTCTTACTAGTTTGCCAACTAAGTAAGAGGTGGGTGATGTAACATATAGTCTAATAAATTCAGTACGAGGAAACTTCAATGTTCTTTTATTTGCAATACTCCATCCGTCTCATTTTACTTGTACCATTTGACTGTATTTTTATTTTGTTAGCCTTCAATTAGACCGCGTAAACTGCCGGATCACGTTTACTAGTATACCAAATGGATAGGATAGGAGTTGAGTGAGATTGCATGTAGTAGTTGTCTTACATGTATTTGGAACAAAAGAACTCTAAATTTTTATTTAGAAACTCGAGTTTAGGAATATATCAACTTTGATGACATCTATTTCGGATATTATCATCCAGAAATGCAAAAGTGTTGAATTCTAATTTCCTTTTTTTCAAGTAACTTTATTTGGTCCCGTACACAAAATTAAAATTTCTGATTCCGCCTCTTATATATTAAAAAAAAGTCAAGTACGACTGTATAAGAACATTGACATGGACAATACTAGTATTATAGTACCATCTCCCCTAGACAATTGAGGGTATATCTTTGTATATCTGATATGTGCTTGCAAATGCATATCATAGCAAAAGATAAAATAGGCAAAAAAAAAAAAAAAAAAAAACANAAACAGATACTTTTTTTTTTTTTATAGAATGATACTTTTTTAACAATAATGGTACTTCATTTTTTCCCTATTTTGTCGTTTTGTTGAATGATATGTGTTTGCTATGCATATGATCAGATAGCCGCCTCGCCGCTCCCCTAGACAATTACCTTATCCTTTTGTAGTAACCTAGTTGTACGTGTTTCTGTTTGAAGGGGTATGGATCAGAAGATGGTGTACTATGTGGAGTATTTGATGGTCACGGTAAAAATGGTCATCTAGTGAGCAAGATCATCAGTCGTCGATTACCTCTGTTATTACTTGATAAAAAGAATGCAGTATCGGAGGTTAACCAGAATTTCTCTGAAAGTCATTCAGCTAATTACGATGGTTCATCGCCTGAAAACGAACTCCTTGAATGGGAGGAGGCATACATGAATGCTTTCCCGGAGATGGATGAAGAGATTAAGATGGTCAAAAAAGTCGACTTCTCTTTCAGTGGAAGTACTGCTGTTGTAACTCTCAGACAGGTATTACACGTATTCTTTTATCATAATGTCATGTTCTTTTATTAAATACATGTACTCGTGTTTGCACTCTGACATGAAATTTTGAGCAGGGTGATGATCTTCTCATTGCGAACCTTGGGGATTCAAGGGCTATCCTAGGAACAAAATCAGAAAAAGGAGTTACAACTATTCAATTAACCATTGATTTAAAGCCTGGCACACCTGGTAAGTATATATTAAGCGCACAATCTATACTAGTCCATACCTAGCGAAACCATAGATGAGTAAATGACACGTCTCATCTCCTGCTTTCCTCCATCATTTTACTGTTTGCTATATTTTACAGTTGTGACACTTCTTTCCTCATTCTCTTCCTCGTTCAACATCAATTCACCATTTAGTTCATAGGTTCATTCAACCTCTTCCACAAATACTCAAAATTATTTTACTACTTAATTTATACAGGGTTAAATTATTTTTACCACCTAAAAAAATTGACAAAATTATTTTTTACCACCTAAAAAAAATTATTTTATACCACCTAAAAATAAAATAAAAAGTGTATTTTACCATCTCTTAACTACAAAATGGATGAAAACATAATGTGAATTAATAGGAAGTAAGGGAAAATAGTAGCATATATGCATGAAAATCGTGGGAGATGAAAAAGAAACAAAAAATATAGTCGGTGAAATGGATCCGCATAATGTTTCCTTTCATTTTTTCGGTTAAGAGGTGGTAAAAAGCAATTTTTATTTTATTTTTAGGTGGTTAAAAACAAATTTTATTTTTTAGGTGGTAAAAAACAATTTAACCTTTATACAAAGTATATATATTTTTTGAACCTTCCAGTTCCACCTCTATTTAAATCATATATTCACACTAAAATCACAAACTTTCAATTAAATTAGACTTTTAAAAAATGGCTATACAACCACTGTGTTACTATCCGTTTTTTGAACGGGCTCAAAAGCTAGTTCAGTTTAAAATATGACTTTCATCTTCTGTTTGGATGTCCACATGTAGTTATATATGTAATTAATTTGAGTACGTTGTCTATATGTGTAGATGAAGCAGATAGAATAAGAGGGTCAAACGGTAGGGTATTTGCACTAAAGGATGAACCGGGTGCTCCACGAGCATGGTTGCCTCGAATTTATACACCAGGAATCGCTATGTCACGGTGTTTTGGAGACTTTGTTATGAAAAACTACGGCATAATCTCAACTCCAGTTATCACACATCACCGCATAACTTCTGACGACGTATTTATAGTGCTTGCTACTGATGGGATATGGGATGTGCTTAGCAATGAGGAAGTAGCATCAATAGTATGCGGCGTTGAGAATGAAGAAATGGCAGCAAAAGCAGTGGTGGATGCAGCTGTTAAAGGATGGAAGTCCAAGGTTTCGTTTAACAAGTGTGACGATTGCACTGCTGTTTGTTACTTCTTACAGAACAAGGACTAAAACACAACCCATGCACACCCAATTTTTGAATGATCGATCGATGAGGTTTATCTTTTTGTTTTCATTGTAACAAATGTTGAAAGTATCTTGCCATGCACTTCGATCACTTGATTGTAAGATTTGTAACGTTTGTATGTGGAGATCAGTAAATTTTGTTGATAAAGAATAGGTGATTTAGGGTCGAATTGGAGGGACCATTAAAGGAGCAATTTTTTGAACAAAGGAGAAAGTTTAGAGAGATTTAAGGCGCGCTAGTAACCAATGAGAAGGAGTGACACACAAGTGGTACATAAATTATGGGACAGAAGATTCAGACTCATCTTTGCATGATTTATTTTTCCTCCATGTTATACCTTACTTTTATCTATGATTTGTCTCCAACCTTATCTCATCTGATCTATTTCCGGTGGCGAATGGATTGCCCGGTGCTGTGAATATCCAT TCTGCATTTTTCCAGGAATAAAAATTAAACTTGTTTTTTTTCCATATATAAAATATATTTATATTTTGTGATAATATTAAGATCGATGGGAATTAGTTCATCAGCTCCAATTGCAGTAATTCCAGAGGGTCTTGGGAGTGTGATTTATGATCAAGATGGTATGAAGATTAATCACCAGATTAATTCTGGGATGTCGATTCATTCTCAACGAGGTTGCAAGGCTGTTAATCAAGATTGTGCTGTTCTTTGTCAGGGGTATGGATCAGAAGATGGTGTACTATGTGGAGTATTTGATGGTCACGGTAAAAATGGTCATCTAGTGAGCAAGATCATCAGTCGTCGATTACCTCTGTTATTACTTGATAAAAAGAATGCAGTATCGGAGGTTAACCAGAATTTCTCTGAAAGTCATTCAGCTAATTACGATGGTTCATCGCCTGAAAACGAACTCCTTGAATGGGAGGAGGCATACATGAATGCTTTCCCGGAGATGGATGAAGAGATTAAGATGGTCAAAAAAGTCGACTTCTCTTTCAGTGGAAGTACTGCTGTTGTAACTCTCAGACAGGGTGATGATCTTCTCATTGCGAACCTTGGGGATTCAAGGGCTATCCTAGGAACAAAATCAGAAAAAGGAGTTACAACTATTCAATTAACCATTGATTTAAAGCCTGGCACACCTGATGAAGCAGATAGAATAAGAGGGTCAAACGGTAGGGTATTTGCACTAAAGGATGAACCGGGTGCTCCACGAGCATGGTTGCCTCGAATTTATACACCAGGAATCGCTATGTCACGGTGTTTTGGAGACTTTGTTATGAAAAACTACGGCATAATCTCAACTCCAGTTATCACACATCACCGCATAACTTCTGACGACGTATTTATAGTGCTTGCTACTGATGGGATATGGGATGTGCTTAGCAATGAGGAAGTAGCATCAATAGTATGCGGCGTTGAGAATGAAGAAATGGCAGCAAAAGCAGTGGTGGATGCAGCTGTTAAAGGATGGAAGTCCAAGGTTTCGTTTAACAAGTGTGACGATTGCACTGCTGTTTGTTACTTCTTACAGAACAAGGACTAAAACACAACCCATGCACACCCAATTTTTGAATGATCGATCGATGAGGTTTATCTTTTTGTTTTCATTGTAACAAATGTTGAAAGTATCTTGCCATGCACTTCGATCACTTGATTGTAAGATTTGTAACGTTTGTATGTGGAGATCAGTAAATTTTGTTGATAAAGAATAGGTGATTTAGGGTCGAATTGGAGGGACCATTAAAGGAGCAATTTTTTGAACAAAGGAGAAAGTTTAGAGAGATTTAAGGCGCGCTAGTAACCAATGAGAAGGAGTGACACACAAGTGGTACATAAATTATGGGACAGAAGATTCAGACTCATCTTTGCATGATTTATTTTTCCTCCATGTTATACCTTACTTTTATCTATGATTTGTCTCCAACCTTATCTCATCTGATCTATTTCCGGTGGCGAATGGATTGCCCGGTGCTGTGAATATCCAT ATGGGAATTAGTTCATCAGCTCCAATTGCAGTAATTCCAGAGGGTCTTGGGAGTGTGATTTATGATCAAGATGGTATGAAGATTAATCACCAGATTAATTCTGGGATGTCGATTCATTCTCAACGAGGTTGCAAGGCTGTTAATCAAGATTGTGCTGTTCTTTGTCAGGGGTATGGATCAGAAGATGGTGTACTATGTGGAGTATTTGATGGTCACGGTAAAAATGGTCATCTAGTGAGCAAGATCATCAGTCGTCGATTACCTCTGTTATTACTTGATAAAAAGAATGCAGTATCGGAGGTTAACCAGAATTTCTCTGAAAGTCATTCAGCTAATTACGATGGTTCATCGCCTGAAAACGAACTCCTTGAATGGGAGGAGGCATACATGAATGCTTTCCCGGAGATGGATGAAGAGATTAAGATGGTCAAAAAAGTCGACTTCTCTTTCAGTGGAAGTACTGCTGTTGTAACTCTCAGACAGGGTGATGATCTTCTCATTGCGAACCTTGGGGATTCAAGGGCTATCCTAGGAACAAAATCAGAAAAAGGAGTTACAACTATTCAATTAACCATTGATTTAAAGCCTGGCACACCTGATGAAGCAGATAGAATAAGAGGGTCAAACGGTAGGGTATTTGCACTAAAGGATGAACCGGGTGCTCCACGAGCATGGTTGCCTCGAATTTATACACCAGGAATCGCTATGTCACGGTGTTTTGGAGACTTTGTTATGAAAAACTACGGCATAATCTCAACTCCAGTTATCACACATCACCGCATAACTTCTGACGACGTATTTATAGTGCTTGCTACTGATGGGATATGGGATGTGCTTAGCAATGAGGAAGTAGCATCAATAGTATGCGGCGTTGAGAATGAAGAAATGGCAGCAAAAGCAGTGGTGGATGCAGCTGTTAAAGGATGGAAGTCCAAGGTTTCGTTTAACAAGTGTGACGATTGCACTGCTGTTTGTTACTTCTTACAGAACAAGGACTAA MGISSSAPIAVIPEGLGSVIYDQDGMKINHQINSGMSIHSQRGCKAVNQDCAVLCQGYGSEDGVLCGVFDGHGKNGHLVSKIISRRLPLLLLDKKNAVSEVNQNFSESHSANYDGSSPENELLEWEEAYMNAFPEMDEEIKMVKKVDFSFSGSTAVVTLRQGDDLLIANLGDSRAILGTKSEKGVTTIQLTIDLKPGTPDEADRIRGSNGRVFALKDEPGAPRAWLPRIYTPGIAMSRCFGDFVMKNYGIISTPVITHHRITSDDVFIVLATDGIWDVLSNEEVASIVCGVENEEMAAKAVVDAAVKGWKSKVSFNKCDDCTAVCYFLQNKD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14385.1 vs. NCBI nr
Match: gi|902202478|gb|KNA14291.1| (hypothetical protein SOVF_108790 [Spinacia oleracea]) HSP 1 Score: 668.7 bits (1724), Expect = 5.300e-189 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
BLAST of Spo14385.1 vs. NCBI nr
Match: gi|731317523|ref|XP_010669220.1| (PREDICTED: probable protein phosphatase 2C 12 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 517.3 bits (1331), Expect = 2.000e-143 Identity = 261/331 (78.85%), Postives = 286/331 (86.40%), Query Frame = 1
BLAST of Spo14385.1 vs. NCBI nr
Match: gi|902202477|gb|KNA14290.1| (hypothetical protein SOVF_108780 [Spinacia oleracea]) HSP 1 Score: 494.6 bits (1272), Expect = 1.400e-136 Identity = 253/335 (75.52%), Postives = 283/335 (84.48%), Query Frame = 1
BLAST of Spo14385.1 vs. NCBI nr
Match: gi|902228548|gb|KNA21158.1| (hypothetical protein SOVF_045990 [Spinacia oleracea]) HSP 1 Score: 468.8 bits (1205), Expect = 8.000e-129 Identity = 244/338 (72.19%), Postives = 278/338 (82.25%), Query Frame = 1
BLAST of Spo14385.1 vs. NCBI nr
Match: gi|3643088|gb|AAC36699.1| (protein phosphatase-2C [Mesembryanthemum crystallinum]) HSP 1 Score: 443.4 bits (1139), Expect = 3.600e-121 Identity = 222/332 (66.87%), Postives = 261/332 (78.61%), Query Frame = 1
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R464_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108790 PE=4 SV=1) HSP 1 Score: 668.7 bits (1724), Expect = 3.700e-189 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FQC8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033220 PE=4 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 1.400e-143 Identity = 261/331 (78.85%), Postives = 286/331 (86.40%), Query Frame = 1
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R449_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108780 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 9.500e-137 Identity = 253/335 (75.52%), Postives = 283/335 (84.48%), Query Frame = 1
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNW7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045990 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 5.600e-129 Identity = 244/338 (72.19%), Postives = 278/338 (82.25%), Query Frame = 1
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Match: O82470_MESCR (Protein phosphatase-2C OS=Mesembryanthemum crystallinum GN=PP2C PE=2 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 2.500e-121 Identity = 222/332 (66.87%), Postives = 261/332 (78.61%), Query Frame = 1
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.100e-80 Identity = 165/358 (46.09%), Postives = 229/358 (63.97%), Query Frame = 1
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Match: P2C72_ARATH (Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2) HSP 1 Score: 292.0 bits (746), Expect = 8.400e-78 Identity = 154/298 (51.68%), Postives = 202/298 (67.79%), Query Frame = 1
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 3.800e-70 Identity = 141/316 (44.62%), Postives = 199/316 (62.97%), Query Frame = 1
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 4.900e-70 Identity = 142/313 (45.37%), Postives = 193/313 (61.66%), Query Frame = 1
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 8.400e-70 Identity = 139/312 (44.55%), Postives = 198/312 (63.46%), Query Frame = 1
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Match: AT5G26010.1 (Protein phosphatase 2C family protein) HSP 1 Score: 292.0 bits (746), Expect = 4.700e-79 Identity = 154/298 (51.68%), Postives = 202/298 (67.79%), Query Frame = 1
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Match: AT1G03590.1 (Protein phosphatase 2C family protein) HSP 1 Score: 266.5 bits (680), Expect = 2.100e-71 Identity = 141/316 (44.62%), Postives = 199/316 (62.97%), Query Frame = 1
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Match: AT4G03415.1 (Protein phosphatase 2C family protein) HSP 1 Score: 260.4 bits (664), Expect = 1.500e-69 Identity = 139/306 (45.42%), Postives = 186/306 (60.78%), Query Frame = 1
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Match: AT4G32950.1 (Protein phosphatase 2C family protein) HSP 1 Score: 253.4 bits (646), Expect = 1.900e-67 Identity = 140/297 (47.14%), Postives = 184/297 (61.95%), Query Frame = 1
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Match: AT1G16220.1 (Protein phosphatase 2C family protein) HSP 1 Score: 251.9 bits (642), Expect = 5.400e-67 Identity = 137/316 (43.35%), Postives = 191/316 (60.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14385.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14385.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14385.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14385.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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