Spo14368 (gene)

Overview
NameSpo14368
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 12560443 .. 12565742 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAAGACGCAGTTGGCGAGATGCAAACTGTATTTTTGCGCTTTGGTAATAACCAAAGGTAATTTGGGAATTCTCAAACGTACCTTCGATCTTTTAACTTACTTCAATTATAATAATTTAATTTAAAAATAGAAAGAGATTTCAAATCATACGACTCATATATTAGTGTTTAAGTTGTGTTTGATTAAAAATAAATATTTTTAAAAGAAATAACCATGGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTAAGAGGCACATTTGTTGAATTATTAGAGCGCAACGTAGGAAATCTAATGGTTTTGGCCAATGAAAAATAAGATTTCTAATTTTTCCGCATCGGGAATTGGAGGCAGTCGTGAGACTATTCGTCCTCAAACTGGTGTAAAACTTCTCTTTTGAATTAAAAAAATGGACTGCCATGTAGATAATTAATTAGGTGTCACATAAATATTTTAATTAATTAATTGCTAATATATATAACTCCATCCAAGATAAAACACTCTAAAATTAAAAAATAAATCTAAAATAAAATTCATCCAAAATCAAAAATTAATCTAAAGTAAAAGTCAATTCAAAATCAAACACTAATCCAATATTAGAGTGCCACGTAGAAAATCTAATTGTTTCTGCCAATTAAAAATAAGATTTCGAAATTATTTTTGAATTAAAAAAGTCGATTGCCACGTAAATAAATAATTAGGTGCCACATATATAGAACAACAACAACAACAACAACAACAACAACAAAGCCTTAGTCCCAAAATGTTTTGGGGTCGGATAACATGAATCGTCGTAGGAGATCGTCATTGTCACCAATCAAACAAGAAAGGAGCGGGAAGTTAAAAAATAAACAGGGAAGAGGTGAGAAAGTGGAATTAATGAAAGTGAGATAAGAGGAAAATGTATATATGTATTATAGAAAAATATTATAAGGGATAATAAAAATAAGTAAACTTTAAAATAAATAAATAAGTAAAATAAGTACATTAAAAAAAATCAAGAAGTAAAAGTAAGAAGAGGCAAAATGGAAGTTGTATAAGTCAAATGAAGTCATCAATGTATATTCTCTCCCTCCACTCTGTCCTATCCAACGCCACATTTTTCTCAATCCCAAGAAGGCCCATATCGTCTCAATCACTATCCTCCAAGGTTTTCTAGGTCTTCCCCTACCCCTTGAAATTCTATCACTTTGCCACCCTTCTAACCTCCTAACCGGGGCATCACTTAATCTTTTGCTTACATGTCAAAACCATCTTAAACGATTTTCCATCATAATCGGTGCAATCCCTACTTTCTTCCTAATAATCTCATTCCTCAAATGATCCTTTCTTGTATGCCCACACATCCAACGTAACATGTGCATCTCCGCCACATTCATCTTTTGCACGTGTCAATGTTTAACTGCCTAGCATTCCGTGCCGTATAACAACGCTTGTTGAATTGTCGTGCGGTAAAATTTTCCCTTCAATCTTTGGGGCATGCCTGGATCACATAGGAACTCCGTGGCATTTTTCTACTTCAACCAACCTGCTTTGATTCTATGAGCCACATCACCATCCAATTTCCTATCCTTTTGGATAATATATCCTAAATAAAGGAACATTTCAGATCCTTATACAATTTTCACATCTAAGGTAATCGCCCCTGTCTCTCTATCTTGGACTCCACTAAACTTACACTCCATATATTCCGTCTTGTTTATACTCAGCCTAAAACCATGAGATTCCAAAGTTTGTCTCAACAACTCAAACTTATTTTCCACTCCTTCTTTTGTTTCATCAATCAACACAATATCATCTGCAAACATCATGCACCAGGTACCTTATTCTTGTACAAAGGGATGATAGTACCTTTTCTCCACTCTAATGGCATCCTATTACTTCCCCAAATCTTGTTGAAATGAATTGTTAACCATACAACCCCTCTCTCCCCCAAGCATCTCCAGACTTCGGTAGATATACCATCGGGCCCCACTGCCCTCTTGTGTCTCATCTTTTTTAATGTCATTTCGATTCTCTTTTGAATTCTTCGCATAAAGTCTAGGTTAACCGGCCATATCCCAATGGATATTTGTATCTCCAATATCGCACCCTTGATCCCCGTTGAACAAGTTATCAAATTAGAACCTCCATCTATCCTTGATTTCCTTTATCTCCCACCAAAACTTTTTGATCAACATCTTTCATACATTTAATCCTCCATCTATCCTAGATTTCCTTAATACTAATATTACACATATATATACAACTTAACCCAAAATTAAACAATTTAATAATTAAAAAATAAATCTAACATGAAATTCATTCCAAAATTAAAAACTAATCTAATCTACTATATAAAATATAAGTTGATATATTTAGGAGTTTTATTTTACAATTTAATAGAATTCGTATATCTGACGGGCTAAAATCTAGTATGTAGTACATTAACATATTTCTGTTAGTTCCGGAATATGATTAAGACTCTTATTGCAACCGTATAATGCTATAAATATTTATCAATGGAAATTACAGGAACACAAATTCTTATTTACAAGGGGTGTACAATAAATATTGTGCACCGGAGTAAAAGTTAACTCAAAATGCTTAAAAGTTAAGCTTATATATGTAAGAGTTATCTACTTTTTAGTGATAAATTTTTTTATTTTAATAAAACTTACTAGAATTTTGCCCGTGCGATGCACGGATTTTATTAAATTGTTAAGTTAAAATAAAACTTATATACTATACCAACTGCTATATTTTATATATTATATTACATTAATTTTTTTTATTTTGGATTGAATTTTATTTTAGATTTAATTTTTAAATATTAGAGTGTTTGTTCTTTTGATGAAGTTGTATATGCGTAATATTAGTAATTAATTAATAAAAATATCTATATGACACCTAATTATTTACCTACATGACACCCAACTTTTTAAATTCAAAAATAATTTTAACATCTTATTTTTCATAGGTCGGAACCATTAGATTTCTTACGTGGCGCTCTATTATTGGGTTAATGTTTGATTTTGGATTGAATTTTATTTTAGACTAGATTAGATCCCGTGCATGCACGATTTTGATCATTTTTTTTCACAAAATATTTAAATGAATATCTCCCAAACTACTGCATAGTTATAACATTTTTAACAAAATTGTTTAAATTTATTCATCTAATATGCATATTTAAAATGCTAATGTGGTAATTTGACTAAAATATTGAGTGATATATTTTCCATTATTAATATAGTGATTTGACTAAAATATTACCAATTTAGAATAATTATTATTACGTTGTATCTATTATTGCCATAATCTATAAACTAAATTTTGTTTCCATACATAAATCGTTTATAAAAAAAAGGTAGAGAATAAAAATAAAATAAAACAAATACATTTTATTTTAGGAAAGTGTTTTTTGGCGGGAAAAAATCGCACCAGGAATTGACATGTGTCATTCCTGGTGTCTCTTTTAGTATATAGTAATAGATAGACTAGACTTTAGCCCGTGCGATGCACGGTTTCTATTAAATTGTTACGTTAAAATAAAACTCCTACATATATCAACTGCTATATTTTATATATTAGATTAAATTAATCTTTTTTTTTTTGGATTGAATTTTATTTTAGATTTATTTTTTAATTATTATAGTGTTTGATGTTGGATGAAATTGTATATAAGAAATATTAATAATTATTTATTAAAAATATTTACGTGGCATCTAATTATTTATTTACGTGGCATTCGACTTTTTAATTCAAAAATAATTTTAAAGTCTTATTTTTCATTGGCCGATACCATTAGATTTCCTACGTGGCGCTATAATATTGGATTAATGTTTGATTTTGGATTGAATTTTATTTTAGATTAGTGTTTGATTTTGGATGAATTTTATTTTAGATTTATTTTTTTAATTACTAGAGCGTTTGATTTTGGATGGAATTGCATATATCAATAATTAATTAATTAATTTAAATATCTACGTGGCACCTAATTTATTATCTACGTGGCACTCGATTTTTTATAATTCAAAAATAAATTAGAAATCTTATTTTTCATTGGCCGAAACCATTAGTAATCCTAGGTGGCGCTCTAATAGTCCAGCAAATATGATTCCTTTATATATGTATATTAGATTAGTGTTTGATTTTGGATGAAATTTATTTTAGATTTATTTTTTAATTATTAGAGTGTTTGACTTTAGATGGAGTTGTATATATTTGTAATTAATTAATTAACATACCTACGTGGCACCTATTTAATTATCTATGTGGCACTCGATTTTTTTAATTCAAAAATAAATTAGAAATCTTATTTTTTATTGGTCGAAACCATTAGTAAAACTAGGTTAAAGTTACAAAAAAAATGGATAAAAATTATATTGGTGTACAATAAATTTATTGTACACGTTGTGCACGTAAGACCTTTTTGGTACAGGAATTTCTTAAAGAAAAAAAAATACTCGGATTCTTTCAAAGAAATTAAAATACTCGAATTTGTTAAAGAAAAAAAATAATCGAATTTCTTAAAGAAAAAAAATTAGTCGAATATTTTCTCAATCGAACATATTTTCTCTCTCCTCAGGCTCAGACTCAAACTCGAACTCGCAGCTGCTGTTATATCCTCCTCCTTCCTCCCGCCTCCCCCTCATAAAACCCTAACTACTCTCGTCCAACAGAACCAGCATCTTTTAGTTATATCACCACCTCCCCTCGGCGGCGCCTCTCCTTCTCTGCCGCTTCTATTCTTGGTATTGACGACAGTGTATAGCTTATTTTCCTCATCTATTTTATTCCTTTCGTATCGATTATATGGGTTTTTTCTGTTGATTTTATTTGTACTTATAGATCCAAACAGCGTTTAGTCAATTATTCTCATGCGGGGATGATGGATTTTGCCGATATGATGATTTCAAATTGTTCAATAGTCTCTGTTGGCATTGTTTTATGTCTAATTAGTTCATACCCAATTCATAATTGTACTGGGTAATCTGGATATTGGTAATCTGGGAATTGGTGAAAGCTTAAACTTGAAGAAAAACAATGTAATTGGATGTTTTATATGACTGTGGGCGTTGTGGTTGTGTTTTTCTTAATTTATCCATCTTCTCCATGAACACAAATCAATATTAAATGAGAGTGAGCTAGAATCTACCCTTTTTTCACTTGTTAACTCATAGCATATACGAAGTATGGCCTAGATAGGAACATAGTTAATGATTATTCCACTTATTTGGTCAATTATATCTGTTGTAGGCATTTTAG

mRNA sequence

ATGACCAAAGACGCAGTTGGCGAGATGCAAACTGTATTTTTGCGCTTTGGTAATAACCAAAGGCTCAGACTCAAACTCGAACTCGCAGCTGCTGTTATATCCTCCTCCTTCCTCCCGCCTCCCCCTCATAAAACCCTAACTACTCTCGTCCAACAGAACCAGCATCTTTTAGTTATATCACCACCTCCCCTCGGCGGCGCCTCTCCTTCTCTGCCGCTTCTATTCTTGGCATTTTAG

Coding sequence (CDS)

ATGACCAAAGACGCAGTTGGCGAGATGCAAACTGTATTTTTGCGCTTTGGTAATAACCAAAGGCTCAGACTCAAACTCGAACTCGCAGCTGCTGTTATATCCTCCTCCTTCCTCCCGCCTCCCCCTCATAAAACCCTAACTACTCTCGTCCAACAGAACCAGCATCTTTTAGTTATATCACCACCTCCCCTCGGCGGCGCCTCTCCTTCTCTGCCGCTTCTATTCTTGGCATTTTAG

Protein sequence

MTKDAVGEMQTVFLRFGNNQRLRLKLELAAAVISSSFLPPPPHKTLTTLVQQNQHLLVISPPPLGGASPSLPLLFLAF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14368.1Spo14368.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14368.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14368.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14368.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14368.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009308 amine metabolic process
biological_process GO:0009853 photorespiration
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0015772 oligosaccharide transport
biological_process GO:0006412 translation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006914 autophagy
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0044424 intracellular part
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0016740 transferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0048038 quinone binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0015157 oligosaccharide transmembrane transporter activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression