Spo14271 (gene)

Overview
NameSpo14271
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00911 : 215861 .. 216179 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCACAGTCTTGTAAAGTTATGTTCTCCTCTCCTTTAGTCCTTGACCATCTCAAATTTTGCTTCTCTAGTGGGAATATGGGATAGGAGTTCTGGTGCCTGTTTGCAGTTTTATCAGTAGGGTGACAATTAACAGCTTTGGGTTTGTTTGTGCAACACTAATCTGTCTTTACTTTACCAAAAACATGTTAGACAAACAATTGATTCGGGGCCATAGTTTCGTTTTAGTTTGTAGAAATGCTACTGTTAGTAATTGTATAATGTGTGGCAATTGGAAGTTCTGGGTATGTTTGGTCACACCTTGTATTTTCAACTGA

mRNA sequence

ATGGCTCACAGTCTTTGGGAATATGGGATAGGAGTTCTGGTGCCTGTTTGCAGTTTTATCAGTAGGGTGACAATTAACAGCTTTGGGTTTGTTTGTGCAACACTAATCTGTCTTTACTTTACCAAAAACATGTTAGACAAACAATTGATTCGGGGCCATAGTTTCGTTTTAGTTTGTAGAAATGCTACTGTTAGTAATTGTATAATGTGTGGCAATTGGAAGTTCTGGGTATGTTTGGTCACACCTTGTATTTTCAACTGA

Coding sequence (CDS)

ATGGCTCACAGTCTTTGGGAATATGGGATAGGAGTTCTGGTGCCTGTTTGCAGTTTTATCAGTAGGGTGACAATTAACAGCTTTGGGTTTGTTTGTGCAACACTAATCTGTCTTTACTTTACCAAAAACATGTTAGACAAACAATTGATTCGGGGCCATAGTTTCGTTTTAGTTTGTAGAAATGCTACTGTTAGTAATTGTATAATGTGTGGCAATTGGAAGTTCTGGGTATGTTTGGTCACACCTTGTATTTTCAACTGA

Protein sequence

MAHSLWEYGIGVLVPVCSFISRVTINSFGFVCATLICLYFTKNMLDKQLIRGHSFVLVCRNATVSNCIMCGNWKFWVCLVTPCIFN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14271.1Spo14271.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14271.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14271.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14271.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14271.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0032502 developmental process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0009790 embryo development
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0006397 mRNA processing
biological_process GO:0032259 methylation
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
cellular_component GO:0005730 nucleolus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005488 binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0052826 inositol hexakisphosphate 2-phosphatase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo236110.75Barchart | Table
Spo028180.73Barchart | Table
Spo006940.73Barchart | Table
Spo022540.70Barchart | Table
Spo044500.70Barchart | Table
Spo092600.69Barchart | Table
Spo085460.69Barchart | Table
Spo068160.69Barchart | Table
Spo150890.68Barchart | Table
Spo156960.68Barchart | Table
Spo233200.68Barchart | Table
Spo235070.68Barchart | Table
Spo119190.67Barchart | Table
Spo021840.67Barchart | Table
Spo049850.67Barchart | Table
Spo159970.67Barchart | Table
Spo177790.67Barchart | Table
Spo202420.67Barchart | Table
Spo202440.67Barchart | Table
Spo239080.67Barchart | Table
Spo268330.67Barchart | Table
Spo051920.66Barchart | Table
Spo048850.66Barchart | Table
Spo031970.66Barchart | Table
Spo272260.66Barchart | Table
Spo244800.66Barchart | Table
Spo184510.66Barchart | Table
Spo262660.66Barchart | Table
Spo268060.66Barchart | Table
Spo018410.66Barchart | Table
Spo011810.66Barchart | Table
Spo064650.66Barchart | Table
Spo066810.66Barchart | Table
Spo074260.66Barchart | Table
Spo082720.66Barchart | Table
Spo047030.66Barchart | Table
Spo130310.66Barchart | Table
Spo142750.66Barchart | Table
Spo036080.66Barchart | Table
Spo112960.65Barchart | Table
Spo117530.65Barchart | Table
Spo054550.65Barchart | Table
Spo119930.65Barchart | Table
Spo091110.65Barchart | Table
Spo134750.65Barchart | Table
Spo237030.65Barchart | Table
Spo214390.65Barchart | Table
Spo218280.65Barchart | Table
Spo231920.65Barchart | Table
Spo172200.65Barchart | Table
Spo022300.65Barchart | Table