Spo14088 (gene) | SpinachBase

Overview


Name	Spo14088
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Zinc finger protein 7, putative
Location	chr4 : 81018136 .. 81018579 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACAACAAGCAAGGTTGGCTGAATCTGGGTTTGACCTCCATACCTGATGAACTCAGTTCATCAAGACCAGTTCCAGTTCCTCCTAAAATATTCTCATGTAACTTTTGCATGAGGAAGTTTTACAGTTCCCAGGCTCTAGGGGGTCATCAGAATGCACACAAGAGGGAAAGAGGTGCAGCAAGAAGATTTCAATCCAAAAGGATGATGTCATTGTCAATGATGGAGTTGCCTGTCAACTCACTCGGTGTACATCCCCATTCACTGGTACACAAACCACACACTACTCAAGATTATGTATTTAAGCATTCAGATGTAGGGGTACTTACCACTCCTTGGACTTGGAACACCGCAACAGATGCTCTGTGGCCTGGGAGTTATCGCGTTAATTTGCAACACCAACCACAGGAATCCAAGCTTGATCTCAATCTACGGCTCTGA

mRNA sequence

ATGGAAGACAACAAGCAAGGTTGGCTGAATCTGGGTTTGACCTCCATACCTGATGAACTCAGTTCATCAAGACCAGTTCCAGTTCCTCCTAAAATATTCTCATGTAACTTTTGCATGAGGAAGTTTTACAGTTCCCAGGCTCTAGGGGGTCATCAGAATGCACACAAGAGGGAAAGAGGTGCAGCAAGAAGATTTCAATCCAAAAGGATGATGTCATTGTCAATGATGGAGTTGCCTGTCAACTCACTCGGTGTACATCCCCATTCACTGGTACACAAACCACACACTACTCAAGATTATGTATTTAAGCATTCAGATGTAGGGGTACTTACCACTCCTTGGACTTGGAACACCGCAACAGATGCTCTGTGGCCTGGGAGTTATCGCGTTAATTTGCAACACCAACCACAGGAATCCAAGCTTGATCTCAATCTACGGCTCTGA

Coding sequence (CDS)

ATGGAAGACAACAAGCAAGGTTGGCTGAATCTGGGTTTGACCTCCATACCTGATGAACTCAGTTCATCAAGACCAGTTCCAGTTCCTCCTAAAATATTCTCATGTAACTTTTGCATGAGGAAGTTTTACAGTTCCCAGGCTCTAGGGGGTCATCAGAATGCACACAAGAGGGAAAGAGGTGCAGCAAGAAGATTTCAATCCAAAAGGATGATGTCATTGTCAATGATGGAGTTGCCTGTCAACTCACTCGGTGTACATCCCCATTCACTGGTACACAAACCACACACTACTCAAGATTATGTATTTAAGCATTCAGATGTAGGGGTACTTACCACTCCTTGGACTTGGAACACCGCAACAGATGCTCTGTGGCCTGGGAGTTATCGCGTTAATTTGCAACACCAACCACAGGAATCCAAGCTTGATCTCAATCTACGGCTCTGA

Protein sequence

MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTATDALWPGSYRVNLQHQPQESKLDLNLRL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14088.1	Spo14088.1	mRNA

Homology

[Close]

BLAST of Spo14088.1 vs. NCBI nr
Match: gi|902185149|gb|KNA10441.1| (hypothetical protein SOVF_144030 [Spinacia oleracea])

HSP 1 Score: 311.6 bits (797), Expect = 7.300e-82
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


		  
Query: 1   MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG 60
           MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG
Sbjct: 1   MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG 60

Query: 61  AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT 120
           AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT
Sbjct: 61  AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT 120

Query: 121 DALWPGSYRVNLQHQPQESKLDLNLRL 148
           DALWPGSYRVNLQHQPQESKLDLNLRL
Sbjct: 121 DALWPGSYRVNLQHQPQESKLDLNLRL 147

[Close]

BLAST of Spo14088.1 vs. NCBI nr
Match: gi|731360122|ref|XP_010691646.1| (PREDICTED: zinc finger protein 7-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 181.8 bits (460), Expect = 8.700e-43
Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 1


		  
Query: 1   MEDNKQGWLNLGLTS----IPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHK 60
           MED+ +GWL LGL      I +ELSSSRP+P   KIFSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 26  MEDSNRGWLKLGLEEKQLCITEELSSSRPIPA--KIFSCNFCMRKFFSSQALGGHQNAHK 85

Query: 61  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV----FKHSDV 120
           RERGA RRFQSKRMM  SMMELP+N     SLGVHPHSLVHK    +DY      K S++
Sbjct: 86  RERGAVRRFQSKRMM--SMMELPINPLMQRSLGVHPHSLVHKAQ-REDYALAGRLKCSNI 145

Query: 121 GVLTTPWTWN-----TATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
           G    P +WN     + TD +WPGSYRVNLQ    Q +ES LDLNLRL
Sbjct: 146 GF---PISWNQIIMDSTTDVMWPGSYRVNLQPVEQQAEESNLDLNLRL 185

[Close]

BLAST of Spo14088.1 vs. NCBI nr
Match: gi|870848815|gb|KMT01104.1| (hypothetical protein BVRB_9g223590 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 181.8 bits (460), Expect = 8.700e-43
Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 1


		  
Query: 1   MEDNKQGWLNLGLTS----IPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHK 60
           MED+ +GWL LGL      I +ELSSSRP+P   KIFSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 19  MEDSNRGWLKLGLEEKQLCITEELSSSRPIPA--KIFSCNFCMRKFFSSQALGGHQNAHK 78

Query: 61  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV----FKHSDV 120
           RERGA RRFQSKRMM  SMMELP+N     SLGVHPHSLVHK    +DY      K S++
Sbjct: 79  RERGAVRRFQSKRMM--SMMELPINPLMQRSLGVHPHSLVHKAQ-REDYALAGRLKCSNI 138

Query: 121 GVLTTPWTWN-----TATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
           G    P +WN     + TD +WPGSYRVNLQ    Q +ES LDLNLRL
Sbjct: 139 GF---PISWNQIIMDSTTDVMWPGSYRVNLQPVEQQAEESNLDLNLRL 178

[Close]

BLAST of Spo14088.1 vs. NCBI nr
Match: gi|731383964|ref|XP_002270534.2| (PREDICTED: zinc finger protein KNUCKLES-like [Vitis vinifera])

HSP 1 Score: 151.4 bits (381), Expect = 1.300e-33
Identity = 86/159 (54.09%), Postives = 99/159 (62.26%), Query Frame = 1


		  
Query: 2   EDNKQGWLNLGL-TSIPDELSSSRPV--PVPPKIFSCNFCMRKFYSSQALGGHQNAHKRE 61
           EDN   WLNL L  ++P     S P   P   K+FSCNFCMRKFYSSQALGGHQNAHKRE
Sbjct: 77  EDNPGEWLNLSLGRNLPSTALDSDPQSRPTSSKVFSCNFCMRKFYSSQALGGHQNAHKRE 136

Query: 62  RGAARRFQSKRMMSLS--MMELPVNSLGVHPHSLVHKPHTTQDYVFKHSD-----VGVLT 121
           RGAARR+QS RMM++    M  P+ SLGV PHSLV KP+     +    D      G+  
Sbjct: 137 RGAARRYQSHRMMAMMGLPMNTPIRSLGVRPHSLVQKPNRDGTAIVARFDDSNTGFGMTW 196

Query: 122 TPWTWNTATDALWPGSYRVNLQHQPQES---KLDLNLRL 148
           TP+T     D +WPGSYR+  Q   Q S   KLDLNLRL
Sbjct: 197 TPFTLEETMDVMWPGSYRLEQQPSEQTSEPLKLDLNLRL 235

[Close]

BLAST of Spo14088.1 vs. NCBI nr
Match: gi|568867281|ref|XP_006486968.1| (PREDICTED: zinc finger protein 4 [Citrus sinensis])

HSP 1 Score: 149.4 bits (376), Expect = 4.800e-33
Identity = 91/164 (55.49%), Postives = 107/164 (65.24%), Query Frame = 1


		  
Query: 2   EDNKQGWLNLGLTSIPDELSSSRPV-----PVPPKIFSCNFCMRKFYSSQALGGHQNAHK 61
           +DN   WLNL L    + LS+SR       P   K+FSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 28  DDNPGEWLNLKLGG--NSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK 87

Query: 62  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV---FKHSDV- 121
           RERGAA+R+QS+RMM  +MM LPV+     SLGV  HSLVHKP      V   F  +D  
Sbjct: 88  RERGAAKRYQSQRMM--TMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTG 147

Query: 122 -GVLTTPWTWNTATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
            G+  TP+    ATD +WPGS+RVNLQ     P+  KLDLNLRL
Sbjct: 148 FGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL 187

[Close]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV79_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_144030 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.100e-82
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


		  
Query: 1   MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG 60
           MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG
Sbjct: 1   MEDNKQGWLNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERG 60

Query: 61  AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT 120
           AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT
Sbjct: 61  AARRFQSKRMMSLSMMELPVNSLGVHPHSLVHKPHTTQDYVFKHSDVGVLTTPWTWNTAT 120

Query: 121 DALWPGSYRVNLQHQPQESKLDLNLRL 148
           DALWPGSYRVNLQHQPQESKLDLNLRL
Sbjct: 121 DALWPGSYRVNLQHQPQESKLDLNLRL 147

[Close]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM94_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223590 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.000e-43
Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 1


		  
Query: 1   MEDNKQGWLNLGLTS----IPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHK 60
           MED+ +GWL LGL      I +ELSSSRP+P   KIFSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 19  MEDSNRGWLKLGLEEKQLCITEELSSSRPIPA--KIFSCNFCMRKFFSSQALGGHQNAHK 78

Query: 61  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV----FKHSDV 120
           RERGA RRFQSKRMM  SMMELP+N     SLGVHPHSLVHK    +DY      K S++
Sbjct: 79  RERGAVRRFQSKRMM--SMMELPINPLMQRSLGVHPHSLVHKAQ-REDYALAGRLKCSNI 138

Query: 121 GVLTTPWTWN-----TATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
           G    P +WN     + TD +WPGSYRVNLQ    Q +ES LDLNLRL
Sbjct: 139 GF---PISWNQIIMDSTTDVMWPGSYRVNLQPVEQQAEESNLDLNLRL 178

[Close]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Match: F6H699_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00260 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.700e-34
Identity = 86/159 (54.09%), Postives = 99/159 (62.26%), Query Frame = 1


		  
Query: 2   EDNKQGWLNLGL-TSIPDELSSSRPV--PVPPKIFSCNFCMRKFYSSQALGGHQNAHKRE 61
           EDN   WLNL L  ++P     S P   P   K+FSCNFCMRKFYSSQALGGHQNAHKRE
Sbjct: 31  EDNPGEWLNLSLGRNLPSTALDSDPQSRPTSSKVFSCNFCMRKFYSSQALGGHQNAHKRE 90

Query: 62  RGAARRFQSKRMMSLS--MMELPVNSLGVHPHSLVHKPHTTQDYVFKHSD-----VGVLT 121
           RGAARR+QS RMM++    M  P+ SLGV PHSLV KP+     +    D      G+  
Sbjct: 91  RGAARRYQSHRMMAMMGLPMNTPIRSLGVRPHSLVQKPNRDGTAIVARFDDSNTGFGMTW 150

Query: 122 TPWTWNTATDALWPGSYRVNLQHQPQES---KLDLNLRL 148
           TP+T     D +WPGSYR+  Q   Q S   KLDLNLRL
Sbjct: 151 TPFTLEETMDVMWPGSYRLEQQPSEQTSEPLKLDLNLRL 189

[Close]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Match: A0A067D423_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043322mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.300e-33
Identity = 91/164 (55.49%), Postives = 107/164 (65.24%), Query Frame = 1


		  
Query: 2   EDNKQGWLNLGLTSIPDELSSSRPV-----PVPPKIFSCNFCMRKFYSSQALGGHQNAHK 61
           +DN   WLNL L    + LS+SR       P   K+FSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 28  DDNPGEWLNLKLGG--NSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK 87

Query: 62  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV---FKHSDV- 121
           RERGAA+R+QS+RMM  +MM LPV+     SLGV  HSLVHKP      V   F  +D  
Sbjct: 88  RERGAAKRYQSQRMM--TMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTG 147

Query: 122 -GVLTTPWTWNTATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
            G+  TP+    ATD +WPGS+RVNLQ     P+  KLDLNLRL
Sbjct: 148 FGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL 187

[Close]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Match: V4S6V1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029351mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.400e-33
Identity = 90/164 (54.88%), Postives = 107/164 (65.24%), Query Frame = 1


		  
Query: 2   EDNKQGWLNLGLTSIPDELSSSRPV-----PVPPKIFSCNFCMRKFYSSQALGGHQNAHK 61
           +DN   WLNL L    + LS+SR       P   K+FSCNFCMRKF+SSQALGGHQNAHK
Sbjct: 28  DDNPGEWLNLKLGG--NSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK 87

Query: 62  RERGAARRFQSKRMMSLSMMELPVN-----SLGVHPHSLVHKPHTTQDYV---FKHSDV- 121
           RERGAA+R+QS+RMM  +MM LPV+     SLGV  HSLVHKP      V   F  +D  
Sbjct: 88  RERGAAKRYQSQRMM--TMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTG 147

Query: 122 -GVLTTPWTWNTATDALWPGSYRVNLQ---HQPQESKLDLNLRL 148
            G+  TP+    ATD +WPGS+R+NLQ     P+  KLDLNLRL
Sbjct: 148 FGMAWTPYVLEEATDVMWPGSFRLNLQLPEPPPEPLKLDLNLRL 187

[Close]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.400e-13
Identity = 60/159 (37.74%), Postives = 76/159 (47.80%), Query Frame = 1


		  
Query: 9   LNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSK 68
           L+L L    ++ + S      P++FSCN+C RKFYSSQALGGHQNAHKRER  A     K
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMA-----K 94

Query: 69  RMMSLSMM--------ELPVNSLGVHPHS--LVHKPHTTQDYV--FKHSDVGVLTTPWTW 128
           R M +  M            +SLG+  HS  L H     Q  V  F H      T P  +
Sbjct: 95  RAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFF 154

Query: 129 ---NTATDALWPGSYRVNLQH--------QPQESKLDLN 145
              +  +D  WPGS+R  ++            ES LDLN
Sbjct: 155 DYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.900e-13
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 1


		  
Query: 30  PKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRM------------------M 89
           P++FSCN+C RKFYSSQALGGHQNAHKRER  A+R Q  +M                   
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 90  SLSMMELPV-------NSLGVHPHSLVHKPH------TTQDYVFKHS 106
             SM  LP+       ++LG+  HS +HKP       T+  +VFK S
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQS 171

[Close]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.700e-11
Identity = 43/94 (45.74%), Postives = 52/94 (55.32%), Query Frame = 1


		  
Query: 14  TSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRMMSL 73
           TSI +E ++S       K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q +   S 
Sbjct: 46  TSIVNESTTS----TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ-RMAASA 105

Query: 74  SMMELPV--------------NSLGVHPHSLVHK 94
           S    P                SLG+  HS+ HK
Sbjct: 106 SAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.500e-10
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1


		  
Query: 14  TSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARR 65
           +S P++    +P  V  ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R
Sbjct: 67  SSNPEQQQQQQP-SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.500e-10
Identity = 35/67 (52.24%), Postives = 41/67 (61.19%), Query Frame = 1


		  
Query: 5  KQGWLNLGLTSIPDELSSSRPVPV-------PPKIFSCNFCMRKFYSSQALGGHQNAHKR 64
          K   LNL L   P  +SSS             P++FSCN+C RKFYSSQALGGHQNAHK 
Sbjct: 17 KNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKL 76

[Close]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 77.4 bits (189), Expect = 8.100e-15
Identity = 60/159 (37.74%), Postives = 76/159 (47.80%), Query Frame = 1


		  
Query: 9   LNLGLTSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSK 68
           L+L L    ++ + S      P++FSCN+C RKFYSSQALGGHQNAHKRER  A     K
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMA-----K 94

Query: 69  RMMSLSMM--------ELPVNSLGVHPHS--LVHKPHTTQDYV--FKHSDVGVLTTPWTW 128
           R M +  M            +SLG+  HS  L H     Q  V  F H      T P  +
Sbjct: 95  RAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFF 154

Query: 129 ---NTATDALWPGSYRVNLQH--------QPQESKLDLN 145
              +  +D  WPGS+R  ++            ES LDLN
Sbjct: 155 DYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 77.0 bits (188), Expect = 1.100e-14
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 1


		  
Query: 30  PKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRM------------------M 89
           P++FSCN+C RKFYSSQALGGHQNAHKRER  A+R Q  +M                   
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 90  SLSMMELPV-------NSLGVHPHSLVHKPH------TTQDYVFKHS 106
             SM  LP+       ++LG+  HS +HKP       T+  +VFK S
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQS 171

[Close]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.800e-13
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 1


		  
Query: 31  KIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRMMSLSMMELPV---------- 90
           K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q  RM S +    P           
Sbjct: 102 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ--RMASAAAFGHPYGFAPVPFHGQ 161

Query: 91  ---NSLGVHPHSLVHKPHTTQDY 101
               +LG+  HS+ HKP +   Y
Sbjct: 162 YSNRTLGIQAHSMSHKPSSYNVY 182

[Close]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 68.2 bits (165), Expect = 4.900e-12
Identity = 43/94 (45.74%), Postives = 52/94 (55.32%), Query Frame = 1


		  
Query: 14  TSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARRFQSKRMMSL 73
           TSI +E ++S       K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q +   S 
Sbjct: 46  TSIVNESTTS----TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ-RMAASA 105

Query: 74  SMMELPV--------------NSLGVHPHSLVHK 94
           S    P                SLG+  HS+ HK
Sbjct: 106 SAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 67.4 bits (163), Expect = 8.400e-12
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1


		  
Query: 14  TSIPDELSSSRPVPVPPKIFSCNFCMRKFYSSQALGGHQNAHKRERGAARR 65
           +S P++    +P  V  ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R
Sbjct: 67  SSNPEQQQQQQP-SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

The following BLAST results are available for this feature:

BLAST of Spo14088.1 vs. NCBI nr
BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
BLAST of Spo14088.1 vs. TAIR (Arabidopsis)

BLAST of Spo14088.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902185149\|gb\|KNA10441.1\|	7.3e-82	100.	hypothetical protein SOVF_1440...	[more]
gi\|731360122\|ref\|XP_010691646.1\|	8.7e-43	63.1	PREDICTED: zinc finger protein...	[more]
gi\|870848815\|gb\|KMT01104.1\|	8.7e-43	63.1	hypothetical protein BVRB_9g22...	[more]
gi\|731383964\|ref\|XP_002270534.2\|	1.3e-33	54.0	PREDICTED: zinc finger protein...	[more]
gi\|568867281\|ref\|XP_006486968.1\|	4.8e-33	55.4	PREDICTED: zinc finger protein...	[more]

BLAST of Spo14088.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QV79_SPIOL	5.1e-82	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BM94_BETVU	6.0e-43	63.1	Uncharacterized protein OS=Bet...	[more]
F6H699_VITVI	8.7e-34	54.0	Putative uncharacterized prote...	[more]
A0A067D423_CITSI	3.3e-33	55.4	Uncharacterized protein OS=Cit...	[more]
V4S6V1_9ROSI	7.4e-33	54.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo14088.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ZFP7_ARATH	1.4e-13	37.7	Zinc finger protein 7 OS=Arabi...	[more]
ZFP1_ARATH	1.9e-13	42.9	Zinc finger protein 1 OS=Arabi...	[more]
ZFP3_ARATH	8.7e-11	45.7	Zinc finger protein 3 OS=Arabi...	[more]
ZFP4_ARATH	1.5e-10	60.7	Zinc finger protein 4 OS=Arabi...	[more]
ZFP2_ARATH	1.5e-10	52.2	Zinc finger protein 2 OS=Arabi...	[more]

BLAST of Spo14088.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G24625.1	8.1e-15	37.7	zinc finger protein 7	[more]
AT1G80730.1	1.1e-14	42.9	zinc-finger protein 1	[more]
AT5G10970.1	5.8e-13	48.1	C2H2 and C2HC zinc fingers sup...	[more]
AT5G25160.1	4.9e-12	45.7	zinc finger protein 3	[more]
AT1G66140.1	8.4e-12	60.7	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 35..55 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 33..60 score: 10
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	3.30.160.60		coord: 31..59 score: 8.
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 30..59 score: 2.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21629	0.71	Barchart \| Table
Spo15160	0.70	Barchart \| Table
Spo20463	0.66	Barchart \| Table