Spo14081 (gene)

Overview
NameSpo14081
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 80964152 .. 80965506 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTTCCATCAAACATCCAGGGAGAAATCGATCCAGTAAAGTTATTTTCCCCAACATCGAACGCCTCCACTCTTGCAAAACCAGGCCATACCTGCCCAGTAAAGTTATTAGCACTAAGATCAACATACTCCAACATTGTGCAGCCATCAAAACACCCATCAACAGACCGTGTAAAGTTATTTGAAGAGATGTTCATAACCCTGAAGTTGCTGCACATTGCAGGGAAACTAGGCCGAATTTCGCCTTCGATTTTGTTCAATGATAAATCCAACACCTCCAAGCTACTCAACCCAGTTAAATTATGCTCCCCCTTAAGTGTATTATGTGACAAGTTAAGGTACTTAAGGCTTCTACACCACTCAAATCACTAGGAGTCATACTTAAGGTATTTCCGGACAAGTCAACAGAACTGAGGTCTGACAATCCTGAAAAATTCCCTGATATCTCCCCATTTAGGTTGCTCCTCGAAAGATCGATTCCGGTAACTCGATGAGTACTCGAATCACAGGAAATACCATATCAACTACAATAGTCTGAACTGAGCTGATTCCACTTAGCTTGTCGTTTCGTATATCATTTTCCCTTATTAGTCCGTGTTTAGGGGTAATCCAGTTACCATATAGGATTTTTTTTTCCCTGGGTAATTGGCTATAGAACTTGCTTGGGAATACGAAGAAGTATGACATTGTTCTATATTCAGGCTATGGTGTCGCTGCAATTAAAAAGTGTTAGAGTCTTAAGGACAATATCGAGCTTTCTTTCTTTAGTTCTCTAATTGTTGTTTTTATTGGGTTTGCTGCTTTAATGGTGCTAATTCTTTTAATTCAATTTTAAGTGGATTTTTAGTAACTTGAATGTTTTGGGTTGAAAGATTTTGTGCCATGTGCAATTTATTTTGTTACTTAATTTTGAGTGGAATTTAAGCAATAAGTATATCCAGCTTATGAGTATGTTGGTTTGTTGTCTGATTTATATATAAATCAAGGTACGTGTTTAATGTTTGTTTGTTGGCTGGCGTATATATCAATGTGTTTAATGTTTGTGTTTTGTTGAAGGCTTTTGCAGATCTGTTTCATTTATCAACACTATTCCAGAGACTCCAGCTGAAATCCAAAAAAGGGTTACTATTGTGGAAAACTTTGACAATTCTGATTTACAAAGACCACACAGTGTGCTAGAATTTTCACTAGAGACTCCAGTTGAAATTCAACAAGCAGGAACATTGGTTGAAAAGTCAGAGAGATCTGGATTACAAAGTTCTCACAGTGTTCTGGAGTCTTCACCAGAGACACCTGATGATGTCCAAAAAATGGGACCACTTTTTGAAGATTCAATGAAATTAGATGCTTGA

mRNA sequence

ATGCAATTTCCATCAAACATCCAGGGAGAAATCGATCCAGTAAAGTTATTTTCCCCAACATCGAACGCCTCCACTCTTGCAAAACCAGGCCATACCTGCCCAGTAAAGTTATTAGCACTAAGATCAACATACTCCAACATTGTGCAGCCATCAAAACACCCATCAACAGACCGTGTAAAGTTATTTGAAGAGATGTTCATAACCCTGAAGTTGCTGCACATTGCAGGGAAACTAGGCCGAATTTCGCCTTCGATTTTGTTCAATGATAAATCCAACACCTCCAAGCTACTCAACCCAGTTAAATTATGCTCCCCCTTAAGTGTATTATGTGACAAGTTAAGATCTGTTTCATTTATCAACACTATTCCAGAGACTCCAGCTGAAATCCAAAAAAGGGTTACTATTGTGGAAAACTTTGACAATTCTGATTTACAAAGACCACACAGTGTGCTAGAATTTTCACTAGAGACTCCAGTTGAAATTCAACAAGCAGGAACATTGGTTGAAAAGTCAGAGAGATCTGGATTACAAAGTTCTCACAGTGTTCTGGAGTCTTCACCAGAGACACCTGATGATGTCCAAAAAATGGGACCACTTTTTGAAGATTCAATGAAATTAGATGCTTGA

Coding sequence (CDS)

ATGCAATTTCCATCAAACATCCAGGGAGAAATCGATCCAGTAAAGTTATTTTCCCCAACATCGAACGCCTCCACTCTTGCAAAACCAGGCCATACCTGCCCAGTAAAGTTATTAGCACTAAGATCAACATACTCCAACATTGTGCAGCCATCAAAACACCCATCAACAGACCGTGTAAAGTTATTTGAAGAGATGTTCATAACCCTGAAGTTGCTGCACATTGCAGGGAAACTAGGCCGAATTTCGCCTTCGATTTTGTTCAATGATAAATCCAACACCTCCAAGCTACTCAACCCAGTTAAATTATGCTCCCCCTTAAGTGTATTATGTGACAAGTTAAGATCTGTTTCATTTATCAACACTATTCCAGAGACTCCAGCTGAAATCCAAAAAAGGGTTACTATTGTGGAAAACTTTGACAATTCTGATTTACAAAGACCACACAGTGTGCTAGAATTTTCACTAGAGACTCCAGTTGAAATTCAACAAGCAGGAACATTGGTTGAAAAGTCAGAGAGATCTGGATTACAAAGTTCTCACAGTGTTCTGGAGTCTTCACCAGAGACACCTGATGATGTCCAAAAAATGGGACCACTTTTTGAAGATTCAATGAAATTAGATGCTTGA

Protein sequence

MQFPSNIQGEIDPVKLFSPTSNASTLAKPGHTCPVKLLALRSTYSNIVQPSKHPSTDRVKLFEEMFITLKLLHIAGKLGRISPSILFNDKSNTSKLLNPVKLCSPLSVLCDKLRSVSFINTIPETPAEIQKRVTIVENFDNSDLQRPHSVLEFSLETPVEIQQAGTLVEKSERSGLQSSHSVLESSPETPDDVQKMGPLFEDSMKLDA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14081.1Spo14081.1mRNA


Homology
[Close]
BLAST of Spo14081.1 vs. NCBI nr
Match: gi|902179976|gb|KNA09445.1| (hypothetical protein SOVF_153370 [Spinacia oleracea])

HSP 1 Score: 142.9 bits (359), Expect = 6.300e-31
Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 1 

		  

Query: 109 LCDKLRSVSFINTIPETPAEIQKRVTIVENFDNSDLQRPHSVLEFSLETPVEIQQAGTLV 168
           L ++ + +    TIPETPAEI+KRVTIVENFDN D+QRPHSVLEFS ETPVEIQQA TL 
Sbjct: 103 LVEEAKFLKACGTIPETPAEIRKRVTIVENFDNLDMQRPHSVLEFSPETPVEIQQAETLA 162

Query: 169 EKSERSGLQSSHSVLESSPETPDDVQKMGPLFEDSMKLDA 209
           EK ERS LQSSHS +ESSPETPDDVQK+G L E+S+KLDA
Sbjct: 163 EKLERSDLQSSHSAMESSPETPDDVQKVGTLAENSVKLDA 202
[Close]
BLAST of Spo14081.1 vs. NCBI nr
Match: gi|731354992|ref|XP_010688901.1| (PREDICTED: uncharacterized protein LOC104902715 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 115.9 bits (289), Expect = 8.300e-23
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1 

		  

Query: 109 LCDKLRSVSFINTIPETPAEIQKRVTIVENFDNSDLQRPHSVLEFSLETPVEIQQAGTLV 168
           L ++ + +    T+PETPAEI+KRVTIVEN D SD +RPHS+ EFS ETPVEIQQ  ++ 
Sbjct: 101 LVEEAKFLKACGTLPETPAEIRKRVTIVENVDKSDARRPHSMPEFSPETPVEIQQVESVA 160

Query: 169 EKSERSGLQSSHSVLESSPETPDDVQKMGPLFEDSMKLD 208
           E  ERS L +SHSV+ESSPETPD++Q +G L E S KL+
Sbjct: 161 ENIERSDLHNSHSVMESSPETPDEIQTVGTLAESSAKLN 199
[Close]
BLAST of Spo14081.1 vs. NCBI nr
Match: gi|965660129|dbj|BAT76548.1| (hypothetical protein VIGAN_01456900 [Vigna angularis var. angularis])

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-13
Identity = 51/118 (43.22%), Postives = 65/118 (55.08%), Query Frame = 1 

		  

Query: 1   MQFPSNIQGEIDPVKLFSPTSNASTLAKPGHTCPVKLLALRSTYSNIVQPSKHPSTDRVK 60
           +QF       I P++ FS T N  +LA   H  P++LL L+S Y ++   SK  S   VK
Sbjct: 47  LQFKGKASKGIVPLRWFSATENILSLANFIHKLPLRLLVLKSKYCSLRHLSKQFSILPVK 106

Query: 61  LF-EEMFITLKLLHIAGKLGRISPSILFNDKSNTSKLLNPVKLCSPLSVLCDKLRSVS 118
           L   E F   KL  +AGK   ISP  L  DKS+  KL+NPVK  SP  +LCD+LR  S
Sbjct: 107 LLLPETFRVTKLSQMAGKFNPISPKNLLFDKSSVCKLVNPVKFSSPSRILCDRLRCTS 164
[Close]
BLAST of Spo14081.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQ90_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_153370 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.400e-31
Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 1 

		  

Query: 109 LCDKLRSVSFINTIPETPAEIQKRVTIVENFDNSDLQRPHSVLEFSLETPVEIQQAGTLV 168
           L ++ + +    TIPETPAEI+KRVTIVENFDN D+QRPHSVLEFS ETPVEIQQA TL 
Sbjct: 103 LVEEAKFLKACGTIPETPAEIRKRVTIVENFDNLDMQRPHSVLEFSPETPVEIQQAETLA 162

Query: 169 EKSERSGLQSSHSVLESSPETPDDVQKMGPLFEDSMKLDA 209
           EK ERS LQSSHS +ESSPETPDDVQK+G L E+S+KLDA
Sbjct: 163 EKLERSDLQSSHSAMESSPETPDDVQKVGTLAENSVKLDA 202
[Close]
BLAST of Spo14081.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMJ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204150 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.800e-23
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1 

		  

Query: 109 LCDKLRSVSFINTIPETPAEIQKRVTIVENFDNSDLQRPHSVLEFSLETPVEIQQAGTLV 168
           L ++ + +    T+PETPAEI+KRVTIVEN D SD +RPHS+ EFS ETPVEIQQ  ++ 
Sbjct: 101 LVEEAKFLKACGTLPETPAEIRKRVTIVENVDKSDARRPHSMPEFSPETPVEIQQVESVA 160

Query: 169 EKSERSGLQSSHSVLESSPETPDDVQKMGPLFEDSMKLD 208
           E  ERS L +SHSV+ESSPETPD++Q +G L E S KL+
Sbjct: 161 ENIERSDLHNSHSVMESSPETPDEIQTVGTLAESSAKLN 199
[Close]
BLAST of Spo14081.1 vs. UniProtKB/TrEMBL
Match: A0A0S3R7B2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G456900 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.100e-13
Identity = 51/118 (43.22%), Postives = 65/118 (55.08%), Query Frame = 1 

		  

Query: 1   MQFPSNIQGEIDPVKLFSPTSNASTLAKPGHTCPVKLLALRSTYSNIVQPSKHPSTDRVK 60
           +QF       I P++ FS T N  +LA   H  P++LL L+S Y ++   SK  S   VK
Sbjct: 47  LQFKGKASKGIVPLRWFSATENILSLANFIHKLPLRLLVLKSKYCSLRHLSKQFSILPVK 106

Query: 61  LF-EEMFITLKLLHIAGKLGRISPSILFNDKSNTSKLLNPVKLCSPLSVLCDKLRSVS 118
           L   E F   KL  +AGK   ISP  L  DKS+  KL+NPVK  SP  +LCD+LR  S
Sbjct: 107 LLLPETFRVTKLSQMAGKFNPISPKNLLFDKSSVCKLVNPVKFSSPSRILCDRLRCTS 164
The following BLAST results are available for this feature:
BLAST of Spo14081.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 3
Match NameE-valueIdentityDescription
gi|902179976|gb|KNA09445.1|6.3e-3174.0hypothetical protein SOVF_1533... [more]
gi|731354992|ref|XP_010688901.1|8.3e-2359.6PREDICTED: uncharacterized pro... [more]
gi|965660129|dbj|BAT76548.1|5.9e-1343.2hypothetical protein VIGAN_014... [more]
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BLAST of Spo14081.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9QQ90_SPIOL4.4e-3174.0Uncharacterized protein OS=Spi... [more]
A0A0J8BMJ1_BETVU5.8e-2359.6Uncharacterized protein OS=Bet... [more]
A0A0S3R7B2_PHAAN4.1e-1343.2Uncharacterized protein OS=Vig... [more]
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BLAST of Spo14081.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14081.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo140800.73Barchart | Table
Spo165810.66Barchart | Table