Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGTCCTCAACAGTTCATCTGAATCCGTACGGCTTGATGTGCACCCTTCAGAGGAGCCGAAAGGTCAACCACAACTAGTGGCTGAGGAAGGTTCCTCTTCTCAGGTTGAAGATGATGCAAAGGGACGAGGAAACAGCTTTCCATCAGAATATCCAGCCATAAGGCCTGGAATTGCCACAGAGATGAACTTTGGTGGATCAGGTTCCTTTCCGAATTTACCTTGGGTTTCTACAACGAGTCCAGGACCCAATGGTAGGACGATATCTGGTGTCACATATAAGTACAATGCCACCCAGATAAAGATTGTATGTGCTTGCCATGGAATACATATGTCTCCTGAAGAATTTATACGGCATGCTACAGAGGAGGAACAAAGTCCTGCCACCACCACCCCCAACTTAACATCCATGCGAAGCACCAACCCTACCACAACTTCTGCAAAGACCTGA ATGCAAGTCCTCAACAGTTCATCTGAATCCGTACGGCTTGATGTGCACCCTTCAGAGGAGCCGAAAGGTCAACCACAACTAGTGGCTGAGGAAGGTTCCTCTTCTCAGGTTGAAGATGATGCAAAGGGACGAGGAAACAGCTTTCCATCAGAATATCCAGCCATAAGGCCTGGAATTGCCACAGAGATGAACTTTGGTGGATCAGGTTCCTTTCCGAATTTACCTTGGGTTTCTACAACGAGTCCAGGACCCAATGGTAGGACGATATCTGGTGTCACATATAAGTACAATGCCACCCAGATAAAGATTGTATGTGCTTGCCATGGAATACATATGTCTCCTGAAGAATTTATACGGCATGCTACAGAGGAGGAACAAAGTCCTGCCACCACCACCCCCAACTTAACATCCATGCGAAGCACCAACCCTACCACAACTTCTGCAAAGACCTGA ATGCAAGTCCTCAACAGTTCATCTGAATCCGTACGGCTTGATGTGCACCCTTCAGAGGAGCCGAAAGGTCAACCACAACTAGTGGCTGAGGAAGGTTCCTCTTCTCAGGTTGAAGATGATGCAAAGGGACGAGGAAACAGCTTTCCATCAGAATATCCAGCCATAAGGCCTGGAATTGCCACAGAGATGAACTTTGGTGGATCAGGTTCCTTTCCGAATTTACCTTGGGTTTCTACAACGAGTCCAGGACCCAATGGTAGGACGATATCTGGTGTCACATATAAGTACAATGCCACCCAGATAAAGATTGTATGTGCTTGCCATGGAATACATATGTCTCCTGAAGAATTTATACGGCATGCTACAGAGGAGGAACAAAGTCCTGCCACCACCACCCCCAACTTAACATCCATGCGAAGCACCAACCCTACCACAACTTCTGCAAAGACCTGA MQVLNSSSESVRLDVHPSEEPKGQPQLVAEEGSSSQVEDDAKGRGNSFPSEYPAIRPGIATEMNFGGSGSFPNLPWVSTTSPGPNGRTISGVTYKYNATQIKIVCACHGIHMSPEEFIRHATEEEQSPATTTPNLTSMRSTNPTTTSAKT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14051.1 vs. NCBI nr
Match: gi|902183573|gb|KNA10142.1| (hypothetical protein SOVF_147170 [Spinacia oleracea]) HSP 1 Score: 295.8 bits (756), Expect = 4.200e-77 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of Spo14051.1 vs. NCBI nr
Match: gi|731353866|ref|XP_010688282.1| (PREDICTED: ninja-family protein mc410 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 248.8 bits (634), Expect = 5.900e-63 Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of Spo14051.1 vs. NCBI nr
Match: gi|661893477|emb|CDP03286.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 163.7 bits (413), Expect = 2.500e-37 Identity = 90/160 (56.25%), Postives = 108/160 (67.50%), Query Frame = 1
BLAST of Spo14051.1 vs. NCBI nr
Match: gi|747063473|ref|XP_011078285.1| (PREDICTED: ninja-family protein mc410 [Sesamum indicum]) HSP 1 Score: 160.2 bits (404), Expect = 2.800e-36 Identity = 88/158 (55.70%), Postives = 104/158 (65.82%), Query Frame = 1
BLAST of Spo14051.1 vs. NCBI nr
Match: gi|970030660|ref|XP_015076615.1| (PREDICTED: ninja-family protein mc410 [Solanum pennellii]) HSP 1 Score: 153.3 bits (386), Expect = 3.400e-34 Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 1
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147170 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 2.900e-77 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPI2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g197080 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 4.100e-63 Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Match: A0A068U470_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041822001 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.700e-37 Identity = 90/160 (56.25%), Postives = 108/160 (67.50%), Query Frame = 1
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Match: K4BZ87_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.100e-34 Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 1
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Match: A0A103Y2B7_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020491 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.200e-33 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Match: NINJA_TOBAC (Ninja-family protein mc410 OS=Nicotiana tabacum GN=MC410 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 7.500e-34 Identity = 81/158 (51.27%), Postives = 107/158 (67.72%), Query Frame = 1
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Match: NINJA_ARATH (AFP homolog 2 OS=Arabidopsis thaliana GN=AFPH2 PE=1 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.500e-31 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Match: NNJA4_ORYSJ (Ninja-family protein Os05g0558800 OS=Oryza sativa subsp. japonica GN=Os05g0558800 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.100e-27 Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 1
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Match: NNJA7_MAIZE (Ninja-family protein 7 OS=Zea mays PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.800e-26 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 1
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Match: NNJA8_MAIZE (Ninja-family protein 8 OS=Zea mays PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.800e-26 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 1
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Match: AT4G28910.2 (novel interactor of JAZ) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-32 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Match: AT3G07250.1 (nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein) HSP 1 Score: 63.9 bits (154), Expect = 9.500e-11 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 1
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Match: AT3G29575.1 (ABI five binding protein 3) HSP 1 Score: 62.0 bits (149), Expect = 3.600e-10 Identity = 40/119 (33.61%), Postives = 57/119 (47.90%), Query Frame = 1
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Match: AT1G13740.1 (ABI five binding protein 2) HSP 1 Score: 55.5 bits (132), Expect = 3.400e-8 Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 1
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Match: AT1G69260.1 (ABI five binding protein) HSP 1 Score: 54.7 bits (130), Expect = 5.800e-8 Identity = 20/49 (40.82%), Postives = 34/49 (69.39%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14051.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14051.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14051.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14051.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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