Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGTGGCGTCTTTGCTGACTATTCAAACCACAAGTATGTTCTCTCCACAACGCTGCTATTGTTAGACTTGCAAAATGCTTTACTTGTGTGAACTTTCCACCTTAGTAACGCAAAGCCAGTTTAAGTTTAAGCCACAACTTTTCCCCACATATATAAATCATAACATTATACAGACTTCATGAAATTTCAAATTCATTTCCCACAATGAAGAATATCAACACAAACACAAACATCCATATTAACCTCAACCATCTTGTTTCATACTTAGTCATCTTCGCCTTTGGGTTAACCATCGGTAGCACATTCTTTACCCGAGATTCTCCTCCTAATTTCCACACGTTTCCCTTCACCCTTGATCTCGTCAACTTCACATCCTCCTCCTCGGATGATTACGATGATACTAATAATACTACTACGACTGCGATCAATGAGACAATTAATATAAAGAGCTATTATATGCATCAGATGGAGGATCCAGAGTTATTGTGGAGAGCATCAATGGTACCCAATTTGGGAGGGGAGAATTTACCGTCCAAATTTAAAACCAAAAAGATTGCTTTTATGTTTTTGGTTAGAGGACCATTGCCGTTGGCACAACTTTGGGAGATGTTCTTTAAAGGGTACGAACATCTTTACACTATTTATGTTCATTCTCATCCTTCTTATAACGAATCTCTTCCCAACAACTCTGTCTTCCATGGAAGGAGAATTCCTAGTAAGGTTAGTTTCCACTTTCCAATTATTCATTTTCTTTTATTTCAGTTACATGTTACTCTACCTTTGTCGGGATTTAGTTGTCATATGTTACTAGTTTAAATTACATTCTGAACATGACAACTAAATTTGGACGGAGTGAGAGAGCATTCCAAATCTATTATCTTCTAGCTTGTTATGTTCTGTTCAAACTATAAATAGAAATGTGTAACTTATTTTTATGACGAGCGTCATCTTAGATTTGAATTGCATACAAGTAGGACTACATGAGAATTAGAGGATTAAGTGGACTAAGTCTCGATTAAATGCTACCTTGGGGGAAATTAGTTGCAGTTAACATCTCATCAAATTTTCATTTTTGTTACCGTTGTTTTTGGGATTTTCTTTTACCCATTCAAGTAGGAAACTGATTAGCTAAGTGGTGTGTCTTCGTTTTGCAGATTTACTAACATTTTGAGTATCACAACAATAATCAATAATAAAATTCTTTTTAATTCGATAGTTTAATTAATTATAATTTCATAAAGTTATAATTTTAGTATTATTAAAAAATTTTAAGGATGAAAAACAAAAACGAAGAAAGGGGTAAGTATTACTTCTACTCCCTCTGTCCCAGATTAGTTGTTACACTTTCCTTTTTCGTCCATCCCAAATTAGTTATTACACTCCTAAATACCTCACTAACTCCTATCATATCTATTTTTTCAATAAAATAACAATTGATAACTAAACAACTACTTATCACGTAAAACTTTGTGCAATGATAAGTGTAACAAATAATTTGGATAGGGGGAGTAATAAAAATTAAATTGGCACAATAACTCAAGCCGAGTTTTACCCTGTTAATTTTGGATCAAACATTTCGAATATCGCATGATTTGATCGGATTCTGGACACTCATAGTTGCACCATATCAATGCTACGAAGTATTTATTTCACTTTAAAGTATCAATGTAAACCGACGTATAAGAAGATTGCACTGGACTAGTATAATTAATCCTACATTCCTACGTACCCACGAGAAGACTTTTTTTTTACTCTATTTTTTTTGATGAGGGGGAACGTAGGATAGCCTACCCACGAGAAGATTAATTAGCAAAGAAAGGAATAAAGGATTGAGAAGGAAGAAGCAAAGTATAAAACCTATAATAGCAAATTAATTAGTCAATTGATTCAATAATAAGCAAAGTCATTAATTTCCCAAAGTTAAGCAGAATCTTGAGGCCCAAGGAAACGCTAGAATGTTGGCTTAAGACTCTGCAAATTCCTGATCTCCAAAATCAAAATATCTTCTTGAAGTTAATGCCATTATTTAATTAAGAGTATTAATTAATCCCAATTATTGGTTGCGGGTTTGGGCCCCACCCACAAGCAAAATCTAAATTAGCTGCTCATTAAAGGTCAACCAATTAAGTTGCTCTTAAAAGTGTCCAACTACTTTAGTATACGTGTGTGACTGTGTGGTGTGCTCATCGTGTATCACAGAATTGTAATCAGCTTTAAATCGTGCTTCATTACTTCAATCTTTATCTAAGTTTTCTCATTTTACATAATAAACCACTACCGCGTATTGTCTCTATTTCACCAATATTAAGATAAAAGTAGAAAAATTATTAAATATAATAAAATATAGATAAAGTAAGAATAATGTATAAAAATGTGGATGTGTGTAAAAATAAAAATGAATAAAGTAAGATAAAATGAGTGAAAAATTGTAAATATTATGGGGTAAGAAGGGTAAGGTAGTAAATTTTCATGTCCAAAAGTAGAATAAAGTAAAGTGTAAAAAATATTATAAAACAGACTAAAATGAAAAGTGTAAAGATCGTTTTGAAACGGATGTAGTATTAACTAACCGTATACTATACATTTTTATACTAGCAACTAGTTCAATGCAATTTGGATTATACACCCGGGTGCACGGTGCTCATTGTGCTACCTGTTGAACATTTATTGAAAATCTAATGAACATTGAGAATGATTTCAATGTACGTGTACTAGTGAAATATTTAAACTATATGTTATATGGATTTGAACTACATGTTCATTGGCTATATTTGGGTATGAACAATATGTTCTTTGTATTTGAACGATATGTTCATTTAAAAACAAGGTGCACAGTAAGCATTGTGCACCCGAGTGCATAAACCATATTTTACTAATTCAACCAGTTAATTAAACCAACTAATACAATAGCTAATTAATAATAAATAGTCAAAATTAAAAACGGAGCAACAACTGATTCTCAAACAATGCGTTTGTTCATAGGGTCCATTATTAACTAGCTTCTCAAAGCCTAAGGCCCTAAGCCATACATGCACTTTCTTTGGGGCGGATTCAAAATTTTGTATGAGGTACGAAATATTTGAGATGTAACACCATGGAGGCCTACGTTTTTAAAATTGTAATCAATAATTTAAAGGTTTACACCATTAATATGTTTAATTATCAATGAAATTTGGATATAATACTATTAACATTATAACGATGTATATTAATTAAAAACTGTAATTGACAATTTATGTTGTTAATATGTTTGATTCTCGACAAGTGTTGTGATAAAGAGCTAATAAATATTTACGTTGAAAAAAATCTAACATTATCCCGTATAAATTTGTTTTTCAAAATTTCAATTGCACAATTTTGTTCTAGTTACAAACATCTAATCCTATTTTGTTAAATGTATACAGGATGTGGAATGGGGAAAATTCAACATGGTAGAAGCAGAACGTCGTCTACTAGCCAACGCTCTACTAGACGTATCAAACGAACGTTTCATTCTTTTATCAGAGTCATGTATACCACTCTTCAATTTCTCCACGATATATTCACACCTCATAAATTCAAACAAGAGTCACGTTGAGGCCTATGATTTGGCTGGTCCCGTGGGGCGTGGGCGTTATAGCTATCACATGATGCCACATGTCATGTTATCTCAATGGCGAAAGGGGTCACAATGGTTCGAGATGGACCGTGGCCTAGCCATTGAAGTTGTGTCCGATCAAGAGTATTTCCCGTTGTTTCAAAGATTTTGTACGCGTGCATGCTATGGAGATGAGCATTATTTACCCACATTTGTTAGCATGAAATTCTCTAGGAGGAATTCAAACAGGAGTATAACTTGGGTTGATTGGTCCAAAACAGGGCCTCATCCCGGTGTGTTCCATAGGCCACTTGTTACTCCAGAACTCCTTACGAGTTTAAGGAGTAACAACACTTGTGAGTATAATGGGGAAAAGACTGATGTTTGTTTTTTGTTTGCAAGAAAGTTCATGCCTGGTACTCTAACAAGGTTGTTGAGATTTGCTCCTCAAATCATGAAGTTCAACTAATGCACTTCTGAGTTGTCCTGTCTTTAGCTAGGTTTTTTTTTACTAGATTTGAAAGAAGAAATTAGGAAACAGATTAAATGTGTATTTATATACCTTCATTTTTTCATTGTAAATTTGGTGATACATAGGAAAGGGACAAAACATATATTGGTGTGGTGATGATATTTTGTAATTTTGTCAATTGTTAAGCCTATGTGGCTATGTGTAATTATATTGTAGAAGATCTTGTATTGATATACTACCTCCG AATTGTGGCGTCTTTGCTGACTATTCAAACCACAAGTATGTTCTCTCCACAACGCTGCTATTGTTAGACTTGCAAAATGCTTTACTTGTGTGAACTTTCCACCTTAGTAACGCAAAGCCAGTTTAAGTTTAAGCCACAACTTTTCCCCACATATATAAATCATAACATTATACAGACTTCATGAAATTTCAAATTCATTTCCCACAATGAAGAATATCAACACAAACACAAACATCCATATTAACCTCAACCATCTTGTTTCATACTTAGTCATCTTCGCCTTTGGGTTAACCATCGGTAGCACATTCTTTACCCGAGATTCTCCTCCTAATTTCCACACGTTTCCCTTCACCCTTGATCTCGTCAACTTCACATCCTCCTCCTCGGATGATTACGATGATACTAATAATACTACTACGACTGCGATCAATGAGACAATTAATATAAAGAGCTATTATATGCATCAGATGGAGGATCCAGAGTTATTGTGGAGAGCATCAATGGTACCCAATTTGGGAGGGGAGAATTTACCGTCCAAATTTAAAACCAAAAAGATTGCTTTTATGTTTTTGGTTAGAGGACCATTGCCGTTGGCACAACTTTGGGAGATGTTCTTTAAAGGGTACGAACATCTTTACACTATTTATGTTCATTCTCATCCTTCTTATAACGAATCTCTTCCCAACAACTCTGTCTTCCATGGAAGGAGAATTCCTAGTAAGGATGTGGAATGGGGAAAATTCAACATGGTAGAAGCAGAACGTCGTCTACTAGCCAACGCTCTACTAGACGTATCAAACGAACGTTTCATTCTTTTATCAGAGTCATGTATACCACTCTTCAATTTCTCCACGATATATTCACACCTCATAAATTCAAACAAGAGTCACGTTGAGGCCTATGATTTGGCTGGTCCCGTGGGGCGTGGGCGTTATAGCTATCACATGATGCCACATGTCATGTTATCTCAATGGCGAAAGGGGTCACAATGGTTCGAGATGGACCGTGGCCTAGCCATTGAAGTTGTGTCCGATCAAGAGTATTTCCCGTTGTTTCAAAGATTTTGTACGCGTGCATGCTATGGAGATGAGCATTATTTACCCACATTTGTTAGCATGAAATTCTCTAGGAGGAATTCAAACAGGAGTATAACTTGGGTTGATTGGTCCAAAACAGGGCCTCATCCCGGTGTGTTCCATAGGCCACTTGTTACTCCAGAACTCCTTACGAGTTTAAGGAGTAACAACACTTGTGAGTATAATGGGGAAAAGACTGATGTTTGTTTTTTGTTTGCAAGAAAGTTCATGCCTGGTACTCTAACAAGGTTGTTGAGATTTGCTCCTCAAATCATGAAGTTCAACTAATGCACTTCTGAGTTGTCCTGTCTTTAGCTAGGTTTTTTTTTACTAGATTTGAAAGAAGAAATTAGGAAACAGATTAAATGTGTATTTATATACCTTCATTTTTTCATTGTAAATTTGGTGATACATAGGAAAGGGACAAAACATATATTGGTGTGGTGATGATATTTTGTAATTTTGTCAATTGTTAAGCCTATGTGGCTATGTGTAATTATATTGTAGAAGATCTTGTATTGATATACTACCTCCG ATGAAGAATATCAACACAAACACAAACATCCATATTAACCTCAACCATCTTGTTTCATACTTAGTCATCTTCGCCTTTGGGTTAACCATCGGTAGCACATTCTTTACCCGAGATTCTCCTCCTAATTTCCACACGTTTCCCTTCACCCTTGATCTCGTCAACTTCACATCCTCCTCCTCGGATGATTACGATGATACTAATAATACTACTACGACTGCGATCAATGAGACAATTAATATAAAGAGCTATTATATGCATCAGATGGAGGATCCAGAGTTATTGTGGAGAGCATCAATGGTACCCAATTTGGGAGGGGAGAATTTACCGTCCAAATTTAAAACCAAAAAGATTGCTTTTATGTTTTTGGTTAGAGGACCATTGCCGTTGGCACAACTTTGGGAGATGTTCTTTAAAGGGTACGAACATCTTTACACTATTTATGTTCATTCTCATCCTTCTTATAACGAATCTCTTCCCAACAACTCTGTCTTCCATGGAAGGAGAATTCCTAGTAAGGATGTGGAATGGGGAAAATTCAACATGGTAGAAGCAGAACGTCGTCTACTAGCCAACGCTCTACTAGACGTATCAAACGAACGTTTCATTCTTTTATCAGAGTCATGTATACCACTCTTCAATTTCTCCACGATATATTCACACCTCATAAATTCAAACAAGAGTCACGTTGAGGCCTATGATTTGGCTGGTCCCGTGGGGCGTGGGCGTTATAGCTATCACATGATGCCACATGTCATGTTATCTCAATGGCGAAAGGGGTCACAATGGTTCGAGATGGACCGTGGCCTAGCCATTGAAGTTGTGTCCGATCAAGAGTATTTCCCGTTGTTTCAAAGATTTTGTACGCGTGCATGCTATGGAGATGAGCATTATTTACCCACATTTGTTAGCATGAAATTCTCTAGGAGGAATTCAAACAGGAGTATAACTTGGGTTGATTGGTCCAAAACAGGGCCTCATCCCGGTGTGTTCCATAGGCCACTTGTTACTCCAGAACTCCTTACGAGTTTAAGGAGTAACAACACTTGTGAGTATAATGGGGAAAAGACTGATGTTTGTTTTTTGTTTGCAAGAAAGTTCATGCCTGGTACTCTAACAAGGTTGTTGAGATTTGCTCCTCAAATCATGAAGTTCAACTAA MKNINTNTNIHINLNHLVSYLVIFAFGLTIGSTFFTRDSPPNFHTFPFTLDLVNFTSSSSDDYDDTNNTTTTAINETINIKSYYMHQMEDPELLWRASMVPNLGGENLPSKFKTKKIAFMFLVRGPLPLAQLWEMFFKGYEHLYTIYVHSHPSYNESLPNNSVFHGRRIPSKDVEWGKFNMVEAERRLLANALLDVSNERFILLSESCIPLFNFSTIYSHLINSNKSHVEAYDLAGPVGRGRYSYHMMPHVMLSQWRKGSQWFEMDRGLAIEVVSDQEYFPLFQRFCTRACYGDEHYLPTFVSMKFSRRNSNRSITWVDWSKTGPHPGVFHRPLVTPELLTSLRSNNTCEYNGEKTDVCFLFARKFMPGTLTRLLRFAPQIMKFN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13832.1 vs. NCBI nr
Match: gi|902164344|gb|KNA06962.1| (hypothetical protein SOVF_176280, partial [Spinacia oleracea]) HSP 1 Score: 722.2 bits (1863), Expect = 4.700e-205 Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 1
BLAST of Spo13832.1 vs. NCBI nr
Match: gi|731334005|ref|XP_010678016.1| (PREDICTED: uncharacterized protein LOC104893585 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 584.7 bits (1506), Expect = 1.200e-163 Identity = 289/389 (74.29%), Postives = 321/389 (82.52%), Query Frame = 1
BLAST of Spo13832.1 vs. NCBI nr
Match: gi|870859789|gb|KMT11183.1| (hypothetical protein BVRB_5g111110 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 538.1 bits (1385), Expect = 1.200e-149 Identity = 260/337 (77.15%), Postives = 286/337 (84.87%), Query Frame = 1
BLAST of Spo13832.1 vs. NCBI nr
Match: gi|568864894|ref|XP_006485819.1| (PREDICTED: uncharacterized protein LOC102611796 [Citrus sinensis]) HSP 1 Score: 454.5 bits (1168), Expect = 1.800e-124 Identity = 229/405 (56.54%), Postives = 288/405 (71.11%), Query Frame = 1
BLAST of Spo13832.1 vs. NCBI nr
Match: gi|567900258|ref|XP_006442617.1| (hypothetical protein CICLE_v10020320mg [Citrus clementina]) HSP 1 Score: 451.8 bits (1161), Expect = 1.200e-123 Identity = 227/405 (56.05%), Postives = 288/405 (71.11%), Query Frame = 1
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI63_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_176280 PE=4 SV=1) HSP 1 Score: 722.2 bits (1863), Expect = 3.300e-205 Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 1
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGM9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111110 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 8.700e-150 Identity = 260/337 (77.15%), Postives = 286/337 (84.87%), Query Frame = 1
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Match: V4TQZ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020320mg PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 8.200e-124 Identity = 227/405 (56.05%), Postives = 288/405 (71.11%), Query Frame = 1
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA71_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g094540 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.400e-123 Identity = 209/300 (69.67%), Postives = 246/300 (82.00%), Query Frame = 1
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Match: A0A151T3D9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_016054 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 1.100e-120 Identity = 209/301 (69.44%), Postives = 243/301 (80.73%), Query Frame = 1
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Match: AT1G68390.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 407.5 bits (1046), Expect = 9.000e-114 Identity = 189/302 (62.58%), Postives = 235/302 (77.81%), Query Frame = 1
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Match: AT5G11730.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 342.4 bits (877), Expect = 3.500e-94 Identity = 169/353 (47.88%), Postives = 227/353 (64.31%), Query Frame = 1
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Match: AT1G68380.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 341.7 bits (875), Expect = 6.100e-94 Identity = 176/305 (57.70%), Postives = 218/305 (71.48%), Query Frame = 1
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Match: AT1G73810.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 339.0 bits (868), Expect = 3.900e-93 Identity = 189/393 (48.09%), Postives = 242/393 (61.58%), Query Frame = 1
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Match: AT1G10280.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 332.8 bits (852), Expect = 2.800e-91 Identity = 181/400 (45.25%), Postives = 244/400 (61.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13832.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13832.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13832.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo13832.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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