Spo13824 (gene)

Overview
NameSpo13824
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00818 : 7087 .. 11976 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGTAGGTTAGATATGGTTAATAAGACATGGTTGTACAATTCAAAGGTGTTGTATTAACCTTGGGGAAGTTTGTTAATATAGTTAAGCTTGCACTGTTAGGATAACGAAATTTACTTTTAAGACAGGGGTCTTAGTAGCGATACAACTTTATTGTTTATGAATTATACAATAAATTAATAGCTTATCTATGTATATTATTATTCTTTGATATCAACAGTATTTTACCAGCAGTCTGCACCGAGTCACATGACCACATATCATAAGCTAGCCAGCAATTTCGATCCGGGGATAAAGATCGTAGTTACGTAGTACGTAGTACTTCTTTAAGAATTTGTTATAAGGGTCAATTATTCTTCGTATATGACAAGTGACAATTGCTAGTGACAATATTAAATATTTTGGTTGAAAATAATGAAACTTAATTACTACTCCAAAATAGATGCGCGTTTATATGTGGTGATCAACCTTGACTCCATCACTACAATAAATTGTACTATTAACGACGGGAAATCCCGTCGCGAAAGGCCAATAACGTTGATTAACGACGGGATTTCCTGTCGCGAACACGTCATAAAAGGGGCCGTCGTTAATAGAAAATCCCGTCGTAAAAGACATTTGCGACGGTTATTCCCGTCATTGTTTGGTTGTTAGCCCCGTCGCAAAAGGCTTTTACGACGGATTTTTTAACCCGTCATAATTAGGTTGTCGTTAAAGATACAAATTCTTGTAGTGCATATTAATTAAATTTGTTAAACCCGGACAGCTAGTCCATAATAAATTTGAAAGTTCAAAATTTTAATTTTTTTTTTCTGGCTAGTGATATACTCGTAAGTTTTTAGGACAATAATATAATGATCTAAAGCCTATTCAAGTCCAAAAGTGATGGGCGACGACCTTGGACTACGCCCAACCTGACCCTTTTGCCTAAAAACGGACCTCTTTTTTGTTTAATTTCCAGCTGGGTCGTATATTACCTCTCCAAATATTGTCTCCCATAATCAGCGACGGATCCAGGTGTTTGGGTGTGGTGTGTCACGACCCGCCAAAAACCTAATACAATAATGCCACAATGACTAGTGCATGATTATAAAAACACAAATTCTTATTTATAAGGGTTGTACAATAATTATTGTACACCAGAGTAAAAGCACTACAAAAAGCTGGGCCATCAACGACAACCCATTTATGACAGGCCCAAAACCCGTCGTTGATGGCATAGTTTTTACGACGGGAAAGTTAAACCGTCATAACCCACCCACGAAAATTAAACCCAGTCTCTCTTATTTTCCCTCCTCCTTCATTTTGCTCCATCAAACAAGAGGGGAAGCCGACAAAGTTCTCAAAGCTTCAAAAAACAAACAAAGGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAGTTTAATTAAGCCAATACAGCTGCAAGTTAGAGAATATTTGAGTAAATATTGAAGGATGCAAGTTAGGTTTCCTCCAAATTGAAGATTCGAATATTGTTGCTTGCAGATTCGTATTATCAGGTATATAATTTCACTCTTTTATTATCCTTTTTAGTTGCTTTAATTTGATTTGTTGCTTCAATTTGATTTGTTGAGTATGATGCGGTTTATTTCCTGTTTATGATAATGAAATTATGTTTGATTTTTCTAAGAATCTATAATACGGTTTATTTCATGTTTATGATAATGAAATTATGTTTGATTTTCCCTGAGAATCTATAATTTGAATTTGATTTTTGTGAGAATCTCAGTCATAATAATTAATTAGCTACTGATTCAAACAAGTTGCATTTATCTACTTAGTGTGCTTAAATTGGGAATTCCTTTGCATTTACAATACTTAAGTGATTCCTATGCTTCTCTAATAACCTTCTAACTGAATCCACAATTCCAAAACCATGATTGTCAAGCTGCTTATCTACCTTTGATTTGGCTAGATTACTCTGGATGCTTCTGGACTTGATTGTAGCTGACTGCAGAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGTAACCCGTACAAGATCAAAGTGTGTGACAGAAGTGTGTTATCATGCGAGTTCATAAAAAATATCTTTATTTGGTGACCACACCTTAGGCTTTATGTAACTAGTTTGGAGCCTTGTCTTGTTTTTAGGTCATGATGGTAACAGTTTAGTTCTGTTCCTGTGACAGTGGTCAGTATAAAACAAAGTAATTGATACTTTTATTGTTTGGTGTAGTAGAATTTATTGTAGGGTATCACCTGCTCGCATGGTTAACTAAATGTTAATAGTAGGTTTTCATGTTAATAAACCGAATCAATATTTGATTATATGGCTTTCTATGCTGCTATTATCTAGGCGGGTTGGATAAATGCTGATTATTTCCTTGTGCTAATGCAACAATAGTAACAAATGTCCATATGTTGCTCTCAATCTGTTTTGAATGTCTCTTTTATGCATAATGTCGTAGGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAGTAGAACCTAAAACGATCAAGTGTCATTTGTAAATAAGTAATATAAGTATACACCTTTTGTTTGTATTAAATTCTTTCAATATACATATTATTAACTGTTCTTTTGGTAATATTGCAGAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGGTATGGATATTTGCTGGTGTTGTTTTTTTTGTTTTACTGAAACACTGGATATTTGCTACCATCAGCCTTCCGTATGTTCTGCCTGAGTTCATTAATCATGTACATGTGCACATAATTTTACCTTCTCCAGGAAGAAGTCAAAGCCTGAATTCATTGGTCATGTTTTCTTAAATACAGTTAGATACTTTGGTTTTGCTACATTACAACATCTAGAAATATAAAAATTCTCTCTTGCATACTTCATAGAATTAAGTTCTGGTTTAAGACTCGCACATCCTATTATTTCTTTTGGATTTTTCCTTTAAGGGAAAAAAGTGAGAGGTAGTTAACACCAGTAGGGCATGTAAAGGTAAACCTTTTGAGCTAGCTTCTGATATTCCAAGATACATCCTTTCTGGAGAAAGGTGTTTCACACCAGAGTTTGAGAAAATTATCATTCATAAACACGAACTTTTGAAATTTGAATCCGGAAGACTTTTCAATACATCCAGATTGATAGAAGGTAGATACATGGAATTCTTAGTTAGGGCTTGGGATCACAGAGCTGATCTGGTTACATCAACTACTGTAGATGATACAATAAAAAGATTGATGACATTTTCCCCATGTTTCCTTCTACAATTGGACTCTATTGACAACAACATTATTACCACTGCTCTGACTATTATTGCATTATATTCAGACTCAGATTTGTATGGTAATGCTGTAATTTTATGCCAATGATACATTAATTCATGCTTTGTTTCATCATTGTATTTCAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGAGTAACCATGCCACAGCGTACGGGAAGTAAGCCATTTCGACAAATAAAGTATGACATGGTAATATGACATCCATACGAAAATAATGTTTGCATGAATTACTTTGTTTTCTAGAAGTGTGATATATTGATTGAATTTTTTGTAGGGTTGAAGTTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTAAGTTTATCTTACTTCCTCTCTGTTTTTTAAGTTCCATAAGTGGAGTTTTCTAAGTTCCATAAGTGGGTTTTGAAACTGTGAAACCCATAAAATCTCCACATTTTATTTTAATCAAATTTTGTCTTGGTTTGAAACACATAACTTGTTTCACTTTCTGCTGAATGCGAAGGAAAGATCTTTTACAAATCAACTACATTTTGCATTAATTGACTTGGTCGACTAATTTTGGGTTCTGTTTGTCTACATCAGGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGACTGCTCTCAAGTTAAGTGGTGTTGCTGATATGCTTCCTTGCTGACTGCTCTGCTAATTAAAGTGCCTCATTTCTATTGGCCGACTCTTCTCTGTTGTAGACAAGTCAGTTTGAATTTTTATATAATTAGTCATCAGATAAACTGGAATTTTTAGATAATTAGGCATCAGACAATTGATTTGGATTTTTTGTATTGAACTGGGGTTGTGTTGTTTTCATTGATTTGTATGCAATGATGATGGTATTACTATAATGTAGAAATCAATGATATATCTTTGGGATATGTAGTAG

mRNA sequence

ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGATTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGACTGCTCTCAAGTTAAGTGGTGTTGCTGATATGCTTCCTTGCTGACTGCTCTGCTAATTAAAGTGCCTCATTTCTATTGGCCGACTCTTCTCTGTTGTAGACAAGTCAGTTTGAATTTTTATATAATTAGTCATCAGATAAACTGGAATTTTTAGATAATTAGGCATCAGACAATTGATTTGGATTTTTTGTATTGAACTGGGGTTGTGTTGTTTTCATTGATTTGTATGCAATGATGATGGTATTACTATAATGTAGAAATCAATGATATATCTTTGGGATATGTAGTAG

Coding sequence (CDS)

ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGATTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGA

Protein sequence

MRCVTLSSLIGLGGPRGLAYEEATNFLSHSATRLHLHRKRFLKFLHENRVYSILIEPFQKLASLRKLLLELIVELEFAAATFEGGKAILQALNDMLGVLFYVFMEYHAFPLMDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKRKQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVNICELFYRKSVGKILKTEVDSGNPPSFEKFWFDTHKTGNILDKPETVEKHVFCDNYLDGGYHFYWLPC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13824.1Spo13824.1mRNA


Homology
[Close]
BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902230009|gb|KNA21675.1| (hypothetical protein SOVF_041030 [Spinacia oleracea])

HSP 1 Score: 249.2 bits (635), Expect = 9.300e-63
Identity = 123/151 (81.46%), Postives = 125/151 (82.78%), Query Frame = 1 

		  

Query: 112 MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKR 171
           MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE                         
Sbjct: 1   MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE------------------------- 60

Query: 172 KQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRV 231
           +QYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RV
Sbjct: 61  EQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRV 120

Query: 232 HKWEDLDSDNVNICELFYRKSVGKILKTEVD 263
           HKWEDLDSDNVNICELFYRKSVGKILKTEV+
Sbjct: 121 HKWEDLDSDNVNICELFYRKSVGKILKTEVE 126
[Close]
BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902209628|gb|KNA16244.1| (hypothetical protein SOVF_090880 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 118.6 bits (296), Expect = 1.900e-23
Identity = 74/172 (43.02%), Postives = 87/172 (50.58%), Query Frame = 1 

		  

Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWE--------------- 250
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWE               
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNVEHMWAVLQ 143

Query: 251 -----------DLDSDNVNICELFYRKSVGKI------LKTEVDSGNPPSFEKFWFDTHK 310
                      +++  +V I E F R++ G +      +K +   G  P+         +
Sbjct: 144 EMIKKTIQENPEMEVFDV-IEECFGRRNKGYVAGYGGSVKPKDLRGPLPNRFDLEMKLKQ 203
[Close]
BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902209629|gb|KNA16245.1| (hypothetical protein SOVF_090880 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 111.3 bits (277), Expect = 3.000e-21
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 

		  

Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWEDLDSDNV
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNV 135
[Close]
BLAST of Spo13824.1 vs. NCBI nr
Match: gi|698526391|ref|XP_009760024.1| (PREDICTED: uncharacterized protein LOC104212458 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 65.5 bits (158), Expect = 1.900e-7
Identity = 34/118 (28.81%), Postives = 54/118 (45.76%), Query Frame = 1 

		  

Query: 197 RVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVN----ICELFYRKS 256
           +V FY    VG +   F+R++GKIVR+ N+CP  V  W D+  + +N      E    ++
Sbjct: 7   KVTFYNNLTVGTNSKLFSRHLGKIVRDRNMCPLGVSSWNDIKEEKLNHMWAAIEARSNRN 66

Query: 257 VGKILKTEV------------------DSGNPPSFEKFWFDTHKTGNILDKPETVEKH 293
              + K ++                    GNPP+    +F+T K    L +PE +EKH
Sbjct: 67  AANLAKLKMLHHISSKPIREIIYQKGGKDGNPPNLATIFFETRKKDIKLVEPEAIEKH 124
[Close]
BLAST of Spo13824.1 vs. NCBI nr
Match: gi|565354772|ref|XP_006344283.1| (PREDICTED: uncharacterized protein LOC102597177 [Solanum tuberosum])

HSP 1 Score: 62.4 bits (150), Expect = 1.600e-6
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1 

		  

Query: 180 VRRRLGQSLTRS-----AGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKW 239
           VRR  GQ+  +      AG+KL+V FY  R VG + N F+R++GK+VR+ ++CP  V  W
Sbjct: 332 VRRGRGQNKCQEVASLQAGQKLKVTFYNNRTVGRNSNLFSRHLGKLVRDHSMCPLGVSSW 391

Query: 240 EDLDSDNVN 244
           +D++ + +N
Sbjct: 392 DDIEEEKLN 400
[Close]
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ71_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041030 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.500e-63
Identity = 123/151 (81.46%), Postives = 125/151 (82.78%), Query Frame = 1 

		  

Query: 112 MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKR 171
           MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE                         
Sbjct: 1   MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE------------------------- 60

Query: 172 KQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRV 231
           +QYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RV
Sbjct: 61  EQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRV 120

Query: 232 HKWEDLDSDNVNICELFYRKSVGKILKTEVD 263
           HKWEDLDSDNVNICELFYRKSVGKILKTEV+
Sbjct: 121 HKWEDLDSDNVNICELFYRKSVGKILKTEVE 126
[Close]
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB57_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_090880 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.300e-23
Identity = 74/172 (43.02%), Postives = 87/172 (50.58%), Query Frame = 1 

		  

Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWE--------------- 250
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWE               
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNVEHMWAVLQ 143

Query: 251 -----------DLDSDNVNICELFYRKSVGKI------LKTEVDSGNPPSFEKFWFDTHK 310
                      +++  +V I E F R++ G +      +K +   G  P+         +
Sbjct: 144 EMIKKTIQENPEMEVFDV-IEECFGRRNKGYVAGYGGSVKPKDLRGPLPNRFDLEMKLKQ 203
[Close]
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9T4_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_090880 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.100e-21
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 

		  

Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWEDLDSDNV
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNV 135
[Close]
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: K4CDQ1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.400e-9
Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 1 

		  

Query: 193 GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVNICELFYRKS 252
           G+KL+V  Y  R VG   N F R++GK  R+ N+CP  V  W D   + +N   ++    
Sbjct: 11  GQKLKVTLYNNRTVGAYTNLFLRHLGKNFRDRNICPLGVSSWNDTKQEKLN--HMWAAVK 70

Query: 253 VGKILKTEVDSGNPPSFEKFWFDTHKTGNILDKPETVEKHV 294
            GK        GNPP     +F+  +  N L  PET+EKHV
Sbjct: 71  GGK-------DGNPPDVASIFFEARQKDNNLVDPETIEKHV 102
[Close]
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: M1DB85_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400035776 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.900e-7
Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 1 

		  

Query: 149 TITVDKSEIKKRQKQKTSGSSKRKQYGPGYAVRRRLGQSLTR-----SAGKKLRVAFYEG 208
           T+  D+ E+ +  +++ +GS + ++      V++  G +L +       G+KLRV FY  
Sbjct: 477 TVPRDEVEVMQDNQRRKTGSCEFEK------VKKVRGPNLCKVVTGLKPGEKLRVTFYHN 536

Query: 209 RVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           RVVGD    F+R++G +VR+ N+CP RVH W D++  N+
Sbjct: 537 RVVGDHHALFSRHLGSLVRDRNMCPLRVHSWTDIEEANL 569
The following BLAST results are available for this feature:
BLAST of Spo13824.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902230009|gb|KNA21675.1|9.3e-6381.4hypothetical protein SOVF_0410... [more]
gi|902209628|gb|KNA16244.1|1.9e-2343.0hypothetical protein SOVF_0908... [more]
gi|902209629|gb|KNA16245.1|3.0e-2196.1hypothetical protein SOVF_0908... [more]
gi|698526391|ref|XP_009760024.1|1.9e-728.8PREDICTED: uncharacterized pro... [more]
gi|565354772|ref|XP_006344283.1|1.6e-640.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RQ71_SPIOL6.5e-6381.4Uncharacterized protein OS=Spi... [more]
A0A0K9RB57_SPIOL1.3e-2343.0Uncharacterized protein (Fragm... [more]
A0A0K9R9T4_SPIOL2.1e-2196.1Uncharacterized protein (Fragm... [more]
K4CDQ1_SOLLC1.4e-936.6Uncharacterized protein OS=Sol... [more]
M1DB85_SOLTU3.9e-734.3Uncharacterized protein OS=Sol... [more]
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BLAST of Spo13824.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13824.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009934 regulation of meristem structural organization
biological_process GO:0007165 signal transduction
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0042742 defense response to bacterium
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0016310 phosphorylation
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0015886 heme transport
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0009451 RNA modification
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0043562 cellular response to nitrogen levels
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006212 uracil catabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0051013 microtubule severing
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006007 glucose catabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0006695 cholesterol biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0010091 trichome branching
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0006816 calcium ion transport
biological_process GO:0009630 gravitropism
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0006486 protein glycosylation
biological_process GO:0006897 endocytosis
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009507 chloroplast
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0008287 protein serine/threonine phosphatase complex
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0047598 7-dehydrocholesterol reductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0009918 sterol delta7 reductase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0015439 heme-transporting ATPase activity
molecular_function GO:0004157 dihydropyrimidinase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0004499 N,N-dimethylaniline monooxygenase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo143830.75Barchart | Table
Spo146010.72Barchart | Table
Spo185750.72Barchart | Table
Spo236640.71Barchart | Table
Spo049070.71Barchart | Table
Spo170320.70Barchart | Table
Spo199650.70Barchart | Table
Spo113390.69Barchart | Table
Spo027490.69Barchart | Table
Spo049850.69Barchart | Table
Spo267890.69Barchart | Table
Spo126630.69Barchart | Table
Spo131840.69Barchart | Table
Spo257110.68Barchart | Table
Spo161610.68Barchart | Table
Spo075860.68Barchart | Table
Spo057810.68Barchart | Table
Spo082450.68Barchart | Table
Spo059280.68Barchart | Table
Spo101560.68Barchart | Table
Spo245660.68Barchart | Table
Spo246070.68Barchart | Table
Spo237160.67Barchart | Table
Spo035900.67Barchart | Table
Spo102260.67Barchart | Table
Spo154200.67Barchart | Table
Spo116410.67Barchart | Table
Spo123220.67Barchart | Table
Spo206950.67Barchart | Table
Spo247520.67Barchart | Table
Spo249930.67Barchart | Table
Spo019290.67Barchart | Table
Spo273620.66Barchart | Table
Spo039050.66Barchart | Table
Spo112960.66Barchart | Table
Spo120120.66Barchart | Table
Spo139520.66Barchart | Table
Spo139700.66Barchart | Table
Spo149420.66Barchart | Table
Spo156390.66Barchart | Table
Spo186290.66Barchart | Table
Spo201870.66Barchart | Table
Spo210550.66Barchart | Table
Spo217290.66Barchart | Table
Spo228940.66Barchart | Table
Spo241030.66Barchart | Table
Spo257890.66Barchart | Table
Spo018400.66Barchart | Table
Spo036300.65Barchart | Table
Spo029330.65Barchart | Table
Spo220280.65Barchart | Table
Spo252300.65Barchart | Table