Spo13789 (gene)

Overview
NameSpo13789
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRer1 protein, putative
LocationSpoScf_02787 : 781 .. 3252 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTCTGTTCCCTTTCTCCTTCCTTCTATTTTTAATTTGGTTTTTAAATCTTTCTTTAAGAAAGTTGTATGTAATGCGTAGTATTTGACTGGAGCTCAGTTTAAAATCAAAGTTGGGTGATTTAGTATAAAGGGTAGTCAACAATTTTTATTTGGGGGGTTATAGTATGCTGCAATATATGCATTCATGAGTATAATTTGGTGAATTTTTTTCTTCTTTTTTCATTGGTTATAATGATAATTTCAGCATGATTTGTGATTTTACTTAAATAATGTTTGGTGATGCTGATCTGAGATCTTGTAGTACAATTAGGGTTGTTTTCCAGGGTTGATTTGTGTTTGGAATTAAATTAAAATTTGGGGTTTTTTGTATAATTGTGATGGGGTTTCGTCTGATTGGAAATCTTGTGTAGTATGATTAGTGTTAGGATATAGCATACTAGCATGACATGTTAATGCTGTGGATGCTCTTTTTATGTACTTATGTCTAAATGTGCTAATTACATGGTGAATGCCTGAACCTGAATTTTGGAACGGGGAGTGTGCGGTGTGATTAGTGTTGGGATGTAGCATACAAGCATGAATGTCAATGCTTATTGTCTAGTACAATTGCTTCTTAGGATTTTACTCTGTGTTTTTGTCAAAATGGTAGTTGCAAGAGTGGGAGAACAAGGCTTTGTAAGAAAGTGATTATCACCTTGCTAGTTAGTTAATGAATGACATATAGCTGAGGTTTGACTTCATAGATGAGCCAGTCGTTTGGTTGAGATTTAATGTGTGACTGAGAAGCTGTTGGTGATAAAACAGGTCATAATGGTTACTTGTACCAGGTTATGGTTAATTTTAGTAGGCATGTTTAATCCTATTTTTTCATTTCTCTGAAGTAATGCAAGTTATATCTACCCATAGACGTGATGAGGAGGGAGGGAGGGAGGGAAGGAGGTGTTATAGTTCAGGAGGGAAAGAGGGTGGGGAATATCTAAGATGTTATACAGTGTCTTTAGTGTCTTGGAGGATACGATGTTAATTAGAAATATGATAATTAAGGTTACTTGGTTTGGAAGACGCAAGGAGAAGCATAGAAGAAACTCTGGAATTCAAATAGACTGCAGGCTGGCTACAGAGCTCAATCGTGTCGCTACGTTGTTTTATAGATCTTTTTTCTGAGACCTATAGGCAATAAGTTTTATACCTTCTTTTGTAGTGAACAGAAGCTACAAAGGATATGGCATGTTGTTGGACTTGTGGTCCGTTGATTCCGGGTTCCTTTTGGTTGATCTTTGACTCACTCCATAGGCTTCAATCCAACAAATTATTATAAAAATTTCTTGCCAATTTAAAAGAAAGAAAGAAATGATAAATAAATATTTGGGATTAAGGCCTTTTAGTTGAACTAGGTATGGTTATCGTCTTATCGTTAATCTTGTTAGATCTGAGATTTTCTCTTACCATGCAATACATTTGGCTCCTCCCAAGGTTGGGTGGGGGAGGTTTGCCAGATGTGTACAGTCTTATCCTCCCTTCCAGTTCCTTGCAACTGCAAAAGAGGCTCTTTAGTGTTACCCCTACCCTAGTTTTCCATATGCGAGGGTCATGTATAAAAGACTAGTTGAAGATACATATCTATTGTGGAGTAAATATAGTAGAGACTTGATGCAGAAATGAAGTATTGTTACTCAAAAGAATGCTGTATAAAGTTTGTATTCACTTAATAATTGAATCTCCCTTATGTGAAGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

mRNA sequence

TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Coding sequence (CDS)

ATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Protein sequence

MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKKVC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13789.1Spo13789.1mRNA


Homology
[Close]
BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239102|gb|KNA25446.1| (hypothetical protein SOVF_006120 isoform B [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187
[Close]
BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239101|gb|KNA25445.1| (hypothetical protein SOVF_006120 isoform A [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187
[Close]
BLAST of Spo13789.1 vs. NCBI nr
Match: gi|731336954|ref|XP_010679533.1| (PREDICTED: protein RER1A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 339.0 bits (868), Expect = 5.500e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1 

		  

Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190
[Close]
BLAST of Spo13789.1 vs. NCBI nr
Match: gi|225438813|ref|XP_002283333.1| (PREDICTED: protein RER1A [Vitis vinifera])

HSP 1 Score: 293.5 bits (750), Expect = 2.600e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1 

		  

Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186
[Close]
BLAST of Spo13789.1 vs. NCBI nr
Match: gi|976899289|gb|KVH87874.1| (hypothetical protein Ccrd_024806 [Cynara cardunculus var. scolymus])

HSP 1 Score: 285.8 bits (730), Expect = 5.500e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1 

		  

Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197
[Close]
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S118_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187
[Close]
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S119_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187
[Close]
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7R9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127360 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.800e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1 

		  

Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190
[Close]
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: D7SVS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00030 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.800e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1 

		  

Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186
[Close]
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A103XBW6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024806 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.800e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1 

		  

Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197
[Close]
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.200e-66
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178
[Close]
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.400e-61
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1 

		  

Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199
[Close]
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 4.100e-61
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1 

		  

Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177
[Close]
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 2.100e-49
Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1 

		  

Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTPH   RW+    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPT+ ++EFRPF+RRLPEFKFW++ TK   +A V 
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182
[Close]
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.700e-49
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 1 

		  

Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTP+   RWI    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPTR ++EFRPF+RRLPEFKFW+S TK   +A   
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMAC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182
[Close]
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT4G39220.1 (Rer1 family protein)

HSP 1 Score: 251.5 bits (641), Expect = 4.000e-67
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1 

		  

Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178
[Close]
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G23310.1 (Rer1 family protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.300e-62
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1 

		  

Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199
[Close]
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-62
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1 

		  

Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177
[Close]
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G18240.1 (Rer1 family protein)

HSP 1 Score: 194.9 bits (494), Expect = 4.500e-50
Identity = 104/187 (55.61%), Postives = 132/187 (70.59%), Query Frame = 1 

		  

Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME   GS    +T+     AS  ++W    S+ FQ++LD+S P++  RW+   V A+ Y 
Sbjct: 1   MEDEPGSENEADTI----VASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
            RVY V G++++SYGL  YILNLLI FLSP+VDPE++ L D  +LP   SDE++PFVRRL
Sbjct: 61  YRVYSVYGYFVISYGLATYILNLLIGFLSPKVDPELEAL-DPDSLPVDESDEYKPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWY+ TKAF +AFVMTF S  DVPVFWPILL YW+VL++LTM+R I HM KYRY P
Sbjct: 121 PEFKFWYAATKAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 180

Query: 182 FSFGKKV 189
           F   K V
Sbjct: 181 FDVRKPV 182
The following BLAST results are available for this feature:
BLAST of Spo13789.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239102|gb|KNA25446.1|4.0e-101100.hypothetical protein SOVF_0061... [more]
gi|902239101|gb|KNA25445.1|4.0e-101100.hypothetical protein SOVF_0061... [more]
gi|731336954|ref|XP_010679533.1|5.5e-9088.9PREDICTED: protein RER1A-like ... [more]
gi|225438813|ref|XP_002283333.1|2.6e-7677.9PREDICTED: protein RER1A [Viti... [more]
gi|976899289|gb|KVH87874.1|5.5e-7478.2hypothetical protein Ccrd_0248... [more]
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BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S118_SPIOL2.8e-101100.Uncharacterized protein OS=Spi... [more]
A0A0K9S119_SPIOL2.8e-101100.Uncharacterized protein OS=Spi... [more]
A0A0J8C7R9_BETVU3.8e-9088.9Uncharacterized protein OS=Bet... [more]
D7SVS2_VITVI1.8e-7677.9Putative uncharacterized prote... [more]
A0A103XBW6_CYNCS3.8e-7478.2Uncharacterized protein OS=Cyn... [more]
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BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RER1A_ARATH7.2e-6666.3Protein RER1A OS=Arabidopsis t... [more]
RER1C_ARATH2.4e-6166.2Protein RER1C OS=Arabidopsis t... [more]
RER1B_ARATH4.1e-6165.7Protein RER1B OS=Arabidopsis t... [more]
RER1_BOVIN2.1e-4957.4Protein RER1 OS=Bos taurus GN=... [more]
RER1_CHICK4.7e-4958.0Protein RER1 OS=Gallus gallus ... [more]
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BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G39220.14.0e-6766.3Rer1 family protein[more]
AT2G23310.11.3e-6266.2Rer1 family protein[more]
AT2G21600.12.3e-6265.7endoplasmatic reticulum retrie... [more]
AT2G18240.14.5e-5055.6Rer1 family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRPIRSF016013AtER_Rer1pcoord: 13..189
score: 5.2
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 1..187
score: 6.0E
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 31..187
score: 1.1
NoneNo IPR availablePANTHERPTHR10743:SF1PROTEIN RER1Ccoord: 1..187
score: 6.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045185 maintenance of protein location
biological_process GO:0035246 peptidyl-arginine N-methylation
biological_process GO:0070933 histone H4 deacetylation
biological_process GO:0061647 histone H3-K9 modification
biological_process GO:0070932 histone H3 deacetylation
biological_process GO:0006810 transport
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0006996 organelle organization
biological_process GO:0006259 DNA metabolic process
biological_process GO:0051276 chromosome organization
biological_process GO:0022402 cell cycle process
biological_process GO:0006566 threonine metabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0016070 RNA metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0009987 cellular process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0032502 developmental process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0007049 cell cycle
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009845 seed germination
biological_process GO:0006310 DNA recombination
biological_process GO:0055085 transmembrane transport
biological_process GO:0044070 regulation of anion transport
biological_process GO:0016042 lipid catabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0010162 seed dormancy process
biological_process GO:0051301 cell division
biological_process GO:0050826 response to freezing
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0019915 lipid storage
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0006281 DNA repair
biological_process GO:0048825 cotyledon development
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0051604 protein maturation
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006338 chromatin remodeling
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0006396 RNA processing
biological_process GO:0010332 response to gamma radiation
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0009909 regulation of flower development
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0010638 positive regulation of organelle organization
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0009888 tissue development
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0050832 defense response to fungus
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0080119 ER body organization
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0008284 positive regulation of cell proliferation
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006508 proteolysis
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009536 plastid
cellular_component GO:0000118 histone deacetylase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0005634 nucleus
cellular_component GO:0000786 nucleosome
cellular_component GO:0016592 mediator complex
cellular_component GO:0005622 intracellular
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046969 NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function GO:0004806 triglyceride lipase activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0017069 snRNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function GO:0097372 NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function GO:0005525 GTP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0016274 protein-arginine N-methyltransferase activity
molecular_function GO:0030731 guanidinoacetate N-methyltransferase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0046970 NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function GO:0004386 helicase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo134870.82Barchart | Table
Spo242130.82Barchart | Table
Spo150920.79Barchart | Table
Spo116820.79Barchart | Table
Spo054150.78Barchart | Table
Spo255070.78Barchart | Table
Spo202350.77Barchart | Table
Spo181430.77Barchart | Table
Spo230670.76Barchart | Table
Spo102110.76Barchart | Table
Spo262050.75Barchart | Table
Spo004440.75Barchart | Table
Spo262060.75Barchart | Table
Spo014030.75Barchart | Table
Spo062770.75Barchart | Table
Spo026090.75Barchart | Table
Spo240640.74Barchart | Table
Spo081980.74Barchart | Table
Spo163780.73Barchart | Table
Spo011830.73Barchart | Table
Spo256610.73Barchart | Table
Spo064970.72Barchart | Table
Spo229360.72Barchart | Table
Spo067110.72Barchart | Table
Spo075930.72Barchart | Table
Spo050900.72Barchart | Table
Spo138770.72Barchart | Table
Spo253460.71Barchart | Table
Spo052500.71Barchart | Table
Spo257790.71Barchart | Table
Spo104500.71Barchart | Table
Spo242030.71Barchart | Table
Spo232980.71Barchart | Table
Spo230920.71Barchart | Table
Spo168940.71Barchart | Table
Spo067170.70Barchart | Table
Spo011280.70Barchart | Table
Spo244160.70Barchart | Table
Spo039040.70Barchart | Table
Spo170390.70Barchart | Table
Spo177620.70Barchart | Table
Spo009080.70Barchart | Table
Spo225050.69Barchart | Table
Spo187840.69Barchart | Table
Spo196580.69Barchart | Table
Spo043710.69Barchart | Table
Spo023890.69Barchart | Table
Spo267260.69Barchart | Table
Spo094950.69Barchart | Table
Spo098550.69Barchart | Table
Spo063800.68Barchart | Table
Spo030080.68Barchart | Table
Spo044090.68Barchart | Table
Spo079160.68Barchart | Table
Spo241900.68Barchart | Table
Spo242250.68Barchart | Table
Spo229390.67Barchart | Table
Spo158980.67Barchart | Table
Spo017440.67Barchart | Table
Spo192900.67Barchart | Table
Spo129180.67Barchart | Table
Spo249160.67Barchart | Table
Spo179840.67Barchart | Table
Spo249370.67Barchart | Table
Spo069440.67Barchart | Table
Spo022080.67Barchart | Table
Spo212430.67Barchart | Table
Spo248740.66Barchart | Table
Spo249360.66Barchart | Table
Spo060970.66Barchart | Table
Spo192310.66Barchart | Table
Spo174710.66Barchart | Table
Spo203090.66Barchart | Table
Spo166940.66Barchart | Table
Spo159940.66Barchart | Table
Spo143780.66Barchart | Table
Spo126990.66Barchart | Table
Spo021050.66Barchart | Table
Spo116430.66Barchart | Table
Spo093070.66Barchart | Table
Spo078210.66Barchart | Table
Spo057610.65Barchart | Table
Spo065710.65Barchart | Table
Spo182200.65Barchart | Table
Spo223370.65Barchart | Table