Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTCCCCCGTTCTTTCTTTTTCTGCACATTTTCTGGGTTGATCGAATAATAATACCCGCATACCCATTGAAAAACTGAAAATCAAGAAGAAAATGGAAGCAGCCATGGGTTTAATGCGAAGGATTCATCCAAAGCATACCGATACCGCCCTCTCTGCCCTTTTATCTCTCATGCCTGAGCATTCCTCTGATCTTCTCTCTCAAGTCGATCAACCTCTTCAGGTCTCTCCTTTCTTTTTCTCGAAATTCGCGGATTTTCTTTCAATTGTATGTTATTGAAACTTATTTGTGTGGTTTGATTTAATCTTGTTTTAAATTTGACTTTTTGGGTTGTTGGAAATTATATGCTGTTATTTGTTGGGTTCTAATTTGTGCGTTATTTTGTGCTCTGGAATTAGATGATTGGTTTATTTAAGATTAATGTTATCAACAATTTGGTTGATTGGGCTGGCTGTGAACTTTGAATTTAGGGTTGCCTAGAGAGGGGGGATTGGTGGTGGTTGATTAGGGGAATCCAGGATGAAAAGGAAATTATAATTTACGATTTGGATGTTTTTTTTAAAAATAATTTGTAGTTATGGTGGTTGTTTTGTTAAAGATGAATGTGTCTAATAATTTGTTATGGTGGTCGTATTTTAAAACTTGTATGGTTGTAAAATACGACGGCGACGATTTGTTGCCCCAAATTGCTGCTTTAGCCTTTTCATTCTTGGGCTTCTTATGTAGTAGTGCCATCGTATGTTGTGAAATAGGACTCCTCTTAATCAATGTGGTAAACTACCTGAGTATTATATTGATGAATGTAATTGAGGGTAGCTTACTGAATACATATCAGAATGGAGTTTTCCATATGCTTTAAACCATCCTGTGTATTGCAACTGTTGAGCAAATGATCTACCGAGTCTATGGGCACATTGGAAAGATAATTCGTTACTCTTTCGTTGCTCTTAGGATATGTCTGGCTTGTGGTTTCTACATACTTGGAAGTCATTCTTATTGGATGCTAACCCTGATCAGTGAATTTGATCATGAAGTAACATCAACTTTTGTGAATTATTATCTAATTGTTAGTTCCACTTCTAGTTGTTTGAGTTCGTTTTTCCCAGCATCTTTATGAAGCTTCCCCAGACAAAGAAAAGGAATCCCGAGAGCTTTGTTGCATCTCCAACTGCTTTAGACTATTGGTGAATAAGATTTTCACGAGGAATCCCTAGTGGTGGCAAGAAATGCATTTGAACTTTCCCCTCCCAGCCATAGAAATTCTTGTGCTTTAAATCCTGTCAGCTTCTCCAAGCAAATTATTTTGCGGTTCTCCTGATATTATATCTTCAATGGACTAATCCTCTGCTGCCCTCCTAATTAATTATCTTTTGGCAATGATGAGGTCACCATTACCTTGTCATCATATCTTTCATCAGTACCACCAAGAAATAGTTTCCTAATATGATGATGATGTTACTACGTAATAAATGCTAACAGTGCAAGAAAGCAAAATTATTCTGTTTGAATTATCGATGATTGGATGATATTAGACACTTTATGTGCTACTTTGATTTGGATAAATTTTGCTGGACACCGAAATATATTCATTTTGTATATATTCTCACGAAAAGTTCTGTTAGGTTCTTAGTTGCTTTTCGTTAACAGGATAAGTTCCGAGGACAAGGCGAGCTAGCATCGGTGTAAACTTACAGAGAGTCGCCAAAGAATTAGCTTATATAAAGAAAAAGAGATTCTGAATTTATTTTGCGGTAAATTTTTTTGACTGAACCTCCCGTTTGACCTACAAGATCTGAAACCTGCTGGACAAGCAGCTCTTGCATCCTCTCTGAAATAGAAGGAACAACTCCACCATGTCCACTCGAAATTACCTCAATCACTGTTCTAGTGGATTGCGTCTTTAGGTGATCAAGAGGGGGCTCGCTTTTTCAGACTTGCTTAAACGAAGCTTTTGGCTTGAATATCTTAGGCAAGAAAGGCAAAAGTTCTCCGATATCGGAAGCGTAATTTAGGAAGCTAACTTCACATTCTAACATTTAGTAGCTCTTTCCTTTAGGCCGTTTTTAGAGGTAGTTAATTACTAATCAAATTGTCTTTCGCACGATACTCTCTCTCATATATGTTTTCTTGGTTATCTTGGATGCCAGATTAAGTTAAAATTTCTGGTTTGTGGGAGCAGGTTTTATGTGATGAAGAAAGTGCAAAGGAATTCATATTGTGTGAATATAACAGAGATGCTGATTCCTACAGGTGAAAACGTTGACTTACACACCTATTTTTTATATGCAATTTTTTATTTTGTTAGACATTGTTTAGTTTTCATCACTCTTCTTCTCTGCCTCTTTCACACATGTTGTCTGAGACTCTGAGCCAAGAGTTGACCATTCAGAAGTCAACACTAGGCATCAAATATTTTATACAATTCTTGACACACAGTTTTCCTTTTGTTTGCAGGTTCGAGCTATTAGTTTGTTTAGGACTTTCCTTTGATGCTTTCTATAGTATAGATTCTCCCACTGCAGGTTTACTTATGCCCATACATGTCTTCTGAATCTTAATTGATAGTGGCAGTGTGGCCTCAAAAGAAGTGTATTCCAATCTATAATCGCACGCTACTATATGCAGAAATATGGAATTTTGGAATTCTTATAAAATTCTTACCTTAATGCTCATAATTTCTCTTTTTATAACCCACATGTTACACCAGCGGTTTTTGCTGATTTTTTTTATACAATTTGATATATTTAGAAGCGGAAACTACAGAGGAAATGTATGCAACTTGTTCTACATGCTACTCTGGTTAGAGAGTCCAGTTACAAATTGAAATTCTAATTTCGTTTGCTCCTTGTAGTTGCAATACTTGCATCTTTTTCCCTTCTTAAATACTACAATGATCTGTGAATAGCTCTTAGCCTCTTGAGTTTATCCTTATCTTCAGTGGTTACTCTGTGAATGTTACCACTTCTAACTGCTTTTCTTAGCAAATTAATAATGTTGCGAAGCTAAAGTTCAATTTGTTTCACCTTATTCCATTATAGGTCACCATGGACAAATAAATACCAACCACCATTGGAGGACGGTCTCTATCCTTCTGTAGAGCTGAGGAATCTCGAAATTGAAGCCAATGATGTATTTGCCGTATATTGTGACCAGTGAGGTCCTTTACTTGCCTCGTACTTGGTTTTCTAATTCAGTTAAAATGCTAAATTACTGTCAGTATTTTTTATTTTTTTTTCCACTTCTGTGTCAGCACGTTTTCCTTTATCTCTTCTTTCTTTCGTGGTTTCTGAAGGGTTTGAAGGAATCAAGTTGTCTTTGATTGCTAGGTATTATGAAGGTGGAGTTTCTTCTGTTTACATGTGGGAAGATGATAATGAAGGATTTGTTGCATGTTTTTTGATAAAGAAAGGTGATTTTTTAACCCCGGTTTCCCTAGGTGCTAATTTTCCCTTCAATCCTGCACAATGAATAATAGAAAAATAAATCTGGAGTTAAAATTGATGTATCTTATGAGGTTTGCTGCATAGTGCATATCAATATCTAACATTTGACTGCCATGTGGAATTGTTCTATAAAATAGATGGTTCAAGGTCTGGTCATGGGCGAAGAGGTTATTTGCATGAAGGACAGTGGGATGCCATCCATGTTATTGAGGTTTGTTTGTTCCATGATTTTTTACTTGTGAACTAGAATGCTGTGCAACCTCATTTTATTTTATCAACATCATATACATATCAAGCGTCAAGTAATTTCAACTTGGAATATAGGTGGGACCTGAGGACGAAGGAACTGCCAGGTACTGTTTAACCAGCACTGTCATGCTTTCATTGACTACAAATAATGACTCCTGTGGGACATTCAGCTTATCCGGATCTATCAGAAGACAGGTATTTTTTATGTTAATATGATCTTAACTAAGACCATTTACTATCTCAATTTTTCACTATGTGACCTGTTGAATTTGATTATGTTAAAGCTATTTGACTGGTTTTTAGCCTACTGTGACAAATGCGGAAAATATGCCAGATTACTTCATAATTTTCACACAAACCCTTTCCCTAATTTTCTTTTTCATAGTGTAGATGAGTATGCAACTGTCAGTAGCTGAAGGTCATCTTTGTAATATGGGACGAATGATTGAAGAATTGGAAGGCAAGCTGCGAAACTCACTGGACCAGGTACCACGCTTGAGATATGATCCGTTTGTTGTCGTTGTTACTCAATATGACAGTTTATTTCATTGCTCATTTACCCCTTGCTTCAGCCCCCATGTGCATGCCTGTATTTTAATGCTTTTGATGGTTTTATATTTTCCAGTCTACACCTAGGCTTGCCGCTCTGCGTATGAAGTGGCAGCTTTATACCTCAGCAAATAGTTTCAATATTCTTATTTAGGATACGTTTGTTAAACCAGTAATGGTAGTATATGATTGTGTTTTTCTACTATGCCCTTCAGTTATGATGGGAAGGACAAAAAAATATGAGACAACTATTATAAAAGCGTTTCCTTAAGTATTAGGGTTGAGACTTGAGACAATGTTATGAGTCTTATGACTAATCCATTTAAAGTAAATTTGAGCTATTTTATTTTGCTGTTTTTTTTTGATAAGCAAGAAAGATACGAACCATATTGCCATTAACTGAAAGGGCATACAACCTGAGTGCGCCTCTGAATCAGATAAAATCTTCTAGGAAGCACTATCCTTAAAAGATGTCAAAACAGAAAGGGCAACAACAGCCACTATACAATATTTGAACTCAATATTAAACTACATTCTAAACACAAGTGTACTTTGACTTTCTTGCATAAGTTTACTCATTGTAGGAACTTTTTGATTCTAAAGAACTTCATATCTTGCTCTACATATGAAGTAGGCACAATCAGTAGACATACACTGCTTTTGGAAAATTTCAGTTTTGCATCTTTTGTAATTTATGCTGTTGAATCTGAGGTAGGTTTATTTTGGGAAGACAAGGGAGATGGTTTGCACTCTGCGGCCACCTGCGGAATTGGCAACGATGAAGCTTCCTGATAGCTGATTTCTACATCTTTGAATCATGATCAACAAGTATCATGATGTGGATCACTAATGGTTTACCAACATTTATTTGAATCGTTGATTATATTTGTTTTCCACAACTTGGTTGAAATCCTCTTCTTGAGTGTTACTAATGTTGGCCTTCGCTTAATATTGGAAGTTGTTTTTGGTTCAATTGTATTATTTGTGGACTTTCAGTTTTTTTTTTATATTAATGAAGAAAGGTTGTTGAACATGGTGAACCTTAAGAGATCATTATTGTTTTAGAAGAAAAGCGATACATTTTCAGGATTAGATCATGTTAGCGATATACTCGGGGGGGTTTTTGGTTAGAGGTATTCATCTAAAGGAAAGGAAAGGAAAGGAAATGAAATGGTACGATTCCCTTTGGTGTTATTTGTTGGGCTCTTTTTTAGAACCGCCAACCCGAAATCACGCTAATGCTGACTCGCATACTCCACCACCCTTATCCACCAGTACCAGCCACCCGAAACCAACCAACCTATTGCTGACCTGCCATTCTCGCACCCTAAAACCACCAAAGGTCCAAAATACATGCAACCACCCAAAACCAACGGCAACCACCTGTAGAACCTCCTGCAACCACATTTGGAGAGAGAAGGG TTTCTCCCCCGTTCTTTCTTTTTCTGCACATTTTCTGGGTTGATCGAATAATAATACCCGCATACCCATTGAAAAACTGAAAATCAAGAAGAAAATGGAAGCAGCCATGGGTTTAATGCGAAGGATTCATCCAAAGCATACCGATACCGCCCTCTCTGCCCTTTTATCTCTCATGCCTGAGCATTCCTCTGATCTTCTCTCTCAAGTCGATCAACCTCTTCAGGTTTTATGTGATGAAGAAAGTGCAAAGGAATTCATATTGTGTGAATATAACAGAGATGCTGATTCCTACAGGTCACCATGGACAAATAAATACCAACCACCATTGGAGGACGGTCTCTATCCTTCTGTAGAGCTGAGGAATCTCGAAATTGAAGCCAATGATGTATTTGCCGTATATTGTGACCAGTATTATGAAGGTGGAGTTTCTTCTGTTTACATGTGGGAAGATGATAATGAAGGATTTGTTGCATGTTTTTTGATAAAGAAAGATGGTTCAAGGTCTGGTCATGGGCGAAGAGGTTATTTGCATGAAGGACAGTGGGATGCCATCCATGTTATTGAGGTGGGACCTGAGGACGAAGGAACTGCCAGGTACTGTTTAACCAGCACTGTCATGCTTTCATTGACTACAAATAATGACTCCTGTGGGACATTCAGCTTATCCGGATCTATCAGAAGACAGATGAGTATGCAACTGTCAGTAGCTGAAGGTCATCTTTGTAATATGGGACGAATGATTGAAGAATTGGAAGGCAAGCTGCGAAACTCACTGGACCAGGTTTATTTTGGGAAGACAAGGGAGATGGTTTGCACTCTGCGGCCACCTGCGGAATTGGCAACGATGAAGCTTCCTGATAGCTGATTTCTACATCTTTGAATCATGATCAACAAGTATCATGATGTGGATCACTAATGGTTTACCAACATTTATTTGAATCGTTGATTATATTTGTTTTCCACAACTTGGTTGAAATCCTCTTCTTGAGTGTTACTAATGTTGGCCTTCGCTTAATATTGGAAGTTGTTTTTGGTTCAATTGTATTATTTGTGGACTTTCAGTTTTTTTTTTATATTAATGAAGAAAGGTTGTTGAACATGGTGAACCTTAAGAGATCATTATTGTTTTAGAAGAAAAGCGATACATTTTCAGGATTAGATCATGTTAGCGATATACTCGGGGGGGTTTTTGGTTAGAGGTATTCATCTAAAGGAAAGGAAAGGAAAGGAAATGAAATGGTACGATTCCCTTTGGTGTTATTTGTTGGGCTCTTTTTTAGAACCGCCAACCCGAAATCACGCTAATGCTGACTCGCATACTCCACCACCCTTATCCACCAGTACCAGCCACCCGAAACCAACCAACCTATTGCTGACCTGCCATTCTCGCACCCTAAAACCACCAAAGGTCCAAAATACATGCAACCACCCAAAACCAACGGCAACCACCTGTAGAACCTCCTGCAACCACATTTGGAGAGAGAAGGG ATGGAAGCAGCCATGGGTTTAATGCGAAGGATTCATCCAAAGCATACCGATACCGCCCTCTCTGCCCTTTTATCTCTCATGCCTGAGCATTCCTCTGATCTTCTCTCTCAAGTCGATCAACCTCTTCAGGTTTTATGTGATGAAGAAAGTGCAAAGGAATTCATATTGTGTGAATATAACAGAGATGCTGATTCCTACAGGTCACCATGGACAAATAAATACCAACCACCATTGGAGGACGGTCTCTATCCTTCTGTAGAGCTGAGGAATCTCGAAATTGAAGCCAATGATGTATTTGCCGTATATTGTGACCAGTATTATGAAGGTGGAGTTTCTTCTGTTTACATGTGGGAAGATGATAATGAAGGATTTGTTGCATGTTTTTTGATAAAGAAAGATGGTTCAAGGTCTGGTCATGGGCGAAGAGGTTATTTGCATGAAGGACAGTGGGATGCCATCCATGTTATTGAGGTGGGACCTGAGGACGAAGGAACTGCCAGGTACTGTTTAACCAGCACTGTCATGCTTTCATTGACTACAAATAATGACTCCTGTGGGACATTCAGCTTATCCGGATCTATCAGAAGACAGATGAGTATGCAACTGTCAGTAGCTGAAGGTCATCTTTGTAATATGGGACGAATGATTGAAGAATTGGAAGGCAAGCTGCGAAACTCACTGGACCAGGTTTATTTTGGGAAGACAAGGGAGATGGTTTGCACTCTGCGGCCACCTGCGGAATTGGCAACGATGAAGCTTCCTGATAGCTGA MEAAMGLMRRIHPKHTDTALSALLSLMPEHSSDLLSQVDQPLQVLCDEESAKEFILCEYNRDADSYRSPWTNKYQPPLEDGLYPSVELRNLEIEANDVFAVYCDQYYEGGVSSVYMWEDDNEGFVACFLIKKDGSRSGHGRRGYLHEGQWDAIHVIEVGPEDEGTARYCLTSTVMLSLTTNNDSCGTFSLSGSIRRQMSMQLSVAEGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVCTLRPPAELATMKLPDS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13755.1 vs. NCBI nr
Match: gi|902164221|gb|KNA06944.1| (hypothetical protein SOVF_176390 isoform A [Spinacia oleracea]) HSP 1 Score: 527.7 bits (1358), Expect = 1.100e-146 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Spo13755.1 vs. NCBI nr
Match: gi|731377187|ref|XP_010667804.1| (PREDICTED: probable F-actin-capping protein subunit beta [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 506.9 bits (1304), Expect = 2.000e-140 Identity = 246/256 (96.09%), Postives = 249/256 (97.27%), Query Frame = 1
BLAST of Spo13755.1 vs. NCBI nr
Match: gi|902164222|gb|KNA06945.1| (hypothetical protein SOVF_176390 isoform B [Spinacia oleracea]) HSP 1 Score: 472.6 bits (1215), Expect = 4.300e-130 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo13755.1 vs. NCBI nr
Match: gi|590604176|ref|XP_007020189.1| (Subunits of heterodimeric actin filament capping protein Capz superfamily [Theobroma cacao]) HSP 1 Score: 455.3 bits (1170), Expect = 7.100e-125 Identity = 215/256 (83.98%), Postives = 240/256 (93.75%), Query Frame = 1
BLAST of Spo13755.1 vs. NCBI nr
Match: gi|565389090|ref|XP_006360296.1| (PREDICTED: probable F-actin-capping protein subunit beta [Solanum tuberosum]) HSP 1 Score: 453.0 bits (1164), Expect = 3.500e-124 Identity = 216/256 (84.38%), Postives = 238/256 (92.97%), Query Frame = 1
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI68_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176390 PE=4 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 7.800e-147 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5M3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_012400 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 1.400e-140 Identity = 246/256 (96.09%), Postives = 249/256 (97.27%), Query Frame = 1
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI81_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176390 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 3.000e-130 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Match: A0A061FSA2_THECC (Subunits of heterodimeric actin filament capping protein Capz superfamily OS=Theobroma cacao GN=TCM_036579 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 4.900e-125 Identity = 215/256 (83.98%), Postives = 240/256 (93.75%), Query Frame = 1
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Match: K4DG08_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 3.200e-124 Identity = 215/256 (83.98%), Postives = 238/256 (92.97%), Query Frame = 1
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Match: CAPZB_ARATH (Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=1 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 2.400e-120 Identity = 206/256 (80.47%), Postives = 233/256 (91.02%), Query Frame = 1
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Match: CAPZB_DROME (F-actin-capping protein subunit beta OS=Drosophila melanogaster GN=cpb PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 4.100e-64 Identity = 128/255 (50.20%), Postives = 169/255 (66.27%), Query Frame = 1
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Match: CAPZB_CHICK (F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus GN=CAPZB PE=1 SV=3) HSP 1 Score: 241.5 bits (615), Expect = 1.000e-62 Identity = 123/246 (50.00%), Postives = 169/246 (68.70%), Query Frame = 1
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Match: CAPZB_RAT (F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb PE=1 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.300e-62 Identity = 123/246 (50.00%), Postives = 169/246 (68.70%), Query Frame = 1
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Match: CAPZB_BOVIN (F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.300e-62 Identity = 123/246 (50.00%), Postives = 169/246 (68.70%), Query Frame = 1
BLAST of Spo13755.1 vs. TAIR (Arabidopsis)
Match: AT1G71790.1 (Subunits of heterodimeric actin filament capping protein Capz superfamily) HSP 1 Score: 433.0 bits (1112), Expect = 1.300e-121 Identity = 206/256 (80.47%), Postives = 233/256 (91.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13755.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13755.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13755.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13755.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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