Spo13649 (gene)

Overview
NameSpo13649
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L14, chloroplastic
Locationchr2 : 22497574 .. 22499645 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAAGATGATGAAGTAGAATATTTGAATGAAATAGTAGATTGTGTATCACGTATATAGCTTTTATTTTTAATTTTTTATTAATTAATAATAATAAATTAATAAAAAGACATGTTGATTATATCAAATTTTTGGGGCACCACTTATTTTAGTTCATCATGGGTAAGGACACTATTGCTGATATAATAACCTGTATACGAAATGCTGACATGAATAGAAAAGGAACGGTTCGAATAGTATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGCTTTATCGAAAATGCGAGAAAACATCAAGAAAGAAACAAATATTTTTTGGTTTTAACTCTGCGACATAGAAGAAACAAGAAAGGGCCTTATCTAAATACTTTCCATTTAAAAAGAGTCAGTCGACCTGGTCTACGAATCTATTCTAATTATCAACGAATTCCTAGAATTTTAGGTGGAATGGGGATTGCAATTCTTTCTACCTCGAGAGGTATAATGACAGATCGGGAGGCTCGACTAGAAGGAATTGGCGGAGAAATTTTATGTTATATATGGTAATCCCTATACTATTCGAATTGGATCCAAAATTTCCTACTTGTGAACAAAAAAAGAGAAAGGACAGCTTGTCTAATATCACTCCTCTATTAGTTGATACTTTAAGGGGGTTTTGTCTGGAATGAAAGAACAAAAATGGATTCATGAAGGTTTGATTACCGAATCACTTCCTAATGGTATGTTCTGGGTTCGTTTAGATAATGAAGATCCGATTCTGGGTTATGTTTCAGGACGGATACGACGTAGTTCTATACGAATTCTACCGGGAGATAGAGTTAAGATTGAAGTAAGCCGTTATGATTCAACTAGAGGTCGTATAATTTATAGACTGCGCAACAAGGATTCGAACGATTAAACAGTTTTTCAACTTCAACACTCCTTTTTACAAGAATACAATCCGAGATTCAAAATATTAAGAAACTTATTTTCTTCCAAGAAATAGATTTAAAATGAAAACTAAGGAATAATAAATATGAAAATAAGAGCTTCTGTTCGTCCAATTTGTGAAAAATGTCGACTGATCCGCAGACGGGGACGAATTATAGTAATTTGTTCTAACCCAAAACATAAACAACGACAAGGATAATAATTCTACTATAACTAAAAACGAAAAAGAATTTTCTATAAAGAATTGCTAAAAGATTTGATTGATGTAAAAAAAAACGGAAGGATTTGTTTTGACATGAAATGGATATATCCATATACCTTTGACTCATATTTATGAGATGAAAAAATATGGCAAAACCTATACCAAAAATTGGTTCACGTAGAAATGGACGTATTAGTTCGCGTAAAAGTGCACGTAAAATACCAAAGGGTGTTATTCATGTTCAAGCAAGTTTTAATAATACCATTGTAACTGTTACAGATGTACGAGGTCGAGTCGTTTCTTGGGCTTCTGCCGGTACTTGTGGATTCAGGGGTACAAAAAGAGGAACACCATTTGCGGCTCAAACCGCAGCGGGAAATGCTATTCGTACGGTGGTGGAACAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTCCTGGTCTCGGAAGGGATGCAGCATTACGGGCTATTCGTAGAAGCGGTATACTATTAAGTTTCGTGCGAGACGTAACCCCTATGCCGCATAATGGCTGTAGGCCTCCTAAAAAAAGACGCGTCTAG

mRNA sequence

ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGGGGTTTTGTCTGGAATGAAAGAACAAAAATGGATTCATGAAGGTTTGATTACCGAATCACTTCCTAATGATGTACGAGGTCGAGTCGTTTCTTGGGCTTCTGCCGGTACTTGTGGATTCAGGGGTACAAAAAGAGGAACACCATTTGCGGCTCAAACCGCAGCGGGAAATGCTATTCGTACGGTGGTGGAACAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTCCTGGTCTCGGAAGGGATGCAGCATTACGGGCTATTCGTAGAAGCGGTATACTATTAAGTTTCGTGCGAGACGTAACCCCTATGCCGCATAATGGCTGTAGGCCTCCTAAAAAAAGACGCGTCTAG

Coding sequence (CDS)

ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGGGGTTTTGTCTGGAATGAAAGAACAAAAATGGATTCATGAAGGTTTGATTACCGAATCACTTCCTAATGATGTACGAGGTCGAGTCGTTTCTTGGGCTTCTGCCGGTACTTGTGGATTCAGGGGTACAAAAAGAGGAACACCATTTGCGGCTCAAACCGCAGCGGGAAATGCTATTCGTACGGTGGTGGAACAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTCCTGGTCTCGGAAGGGATGCAGCATTACGGGCTATTCGTAGAAGCGGTATACTATTAAGTTTCGTGCGAGACGTAACCCCTATGCCGCATAATGGCTGTAGGCCTCCTAAAAAAAGACGCGTCTAG

Protein sequence

MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEGVLSGMKEQKWIHEGLITESLPNDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13649.1Spo13649.1mRNA


Homology
[Close]
BLAST of Spo13649.1 vs. NCBI nr
Match: gi|357453261|ref|XP_003596907.1| (50S ribosomal protein L14 [Medicago truncatula])

HSP 1 Score: 265.8 bits (678), Expect = 7.300e-68
Identity = 139/197 (70.56%), Postives = 158/197 (80.20%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNVADNSGARELMCIRIIGASNRRYA IGD++VAVIK+A+PN+ LERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR NG+II+YDDNAAV+ID+EGNPKGTRIF AIARELRQ  F  +      
Sbjct: 61  VIVRTCKELKRSNGIIIKYDDNAAVLIDKEGNPKGTRIFSAIARELRQLNFVTV------ 120

Query: 121 GVLSGMKEQKWIHEGLITESLPNDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIR 180
                                  DVRGRV+SW+SAG+CGF+GT+RGTPFAAQTAA NAIR
Sbjct: 121 ----------------------TDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIR 169

Query: 181 TVVEQGMQRAEVMIKGP 197
           TVV+QGMQRA V+IKGP
Sbjct: 181 TVVDQGMQRAVVIIKGP 169
[Close]
BLAST of Spo13649.1 vs. NCBI nr
Match: gi|11497563|ref|NP_054971.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 233.0 bits (593), Expect = 5.300e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. NCBI nr
Match: gi|902181471|gb|KNA09754.1| (hypothetical protein SOVF_150420, partial [Spinacia oleracea])

HSP 1 Score: 230.7 bits (587), Expect = 2.600e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. NCBI nr
Match: gi|910354353|ref|YP_009160839.1| (ribosomal protein L14 (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 229.6 bits (584), Expect = 5.800e-57
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. NCBI nr
Match: gi|982898198|ref|YP_009221844.1| (ribosomal protein L14 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 228.8 bits (582), Expect = 9.900e-57
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Match: G7IRF6_MEDTR (50S ribosomal protein L14 OS=Medicago truncatula GN=MTR_2g087550 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.100e-68
Identity = 139/197 (70.56%), Postives = 158/197 (80.20%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNVADNSGARELMCIRIIGASNRRYA IGD++VAVIK+A+PN+ LERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR NG+II+YDDNAAV+ID+EGNPKGTRIF AIARELRQ  F  +      
Sbjct: 61  VIVRTCKELKRSNGIIIKYDDNAAVLIDKEGNPKGTRIFSAIARELRQLNFVTV------ 120

Query: 121 GVLSGMKEQKWIHEGLITESLPNDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIR 180
                                  DVRGRV+SW+SAG+CGF+GT+RGTPFAAQTAA NAIR
Sbjct: 121 ----------------------TDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIR 169

Query: 181 TVVEQGMQRAEVMIKGP 197
           TVV+QGMQRA V+IKGP
Sbjct: 181 TVVDQGMQRAVVIIKGP 169
[Close]
BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR25_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_150420 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.800e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K9G2_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon persicum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.100e-57
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8A5_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon ammodendron GN=rpl14 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.100e-57
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7W9_MESCR (50S ribosomal protein L14, chloroplastic OS=Mesembryanthemum crystallinum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.900e-57
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Match: RK14_SPIOL (50S ribosomal protein L14, chloroplastic OS=Spinacia oleracea GN=rpl14 PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.300e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Match: RK14_COFAR (50S ribosomal protein L14, chloroplastic OS=Coffea arabica GN=rpl14 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.900e-56
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEV+RA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTRIFGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.900e-56
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQ+HLNVADNSGARELMCIRIIGASNRRYA IGD+IVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQSHLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKEALPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Match: RK14_PLAOC (50S ribosomal protein L14, chloroplastic OS=Platanus occidentalis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.900e-56
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLSFTKIVSLAPE 120
[Close]
BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.400e-56
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKEL+RDNGMIIRYDDNAAV+ID EGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 213.4 bits (542), Expect = 1.500e-55
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR+NG IIRYDDNAAV+IDQEGNPKGTR+FGAI RELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Match: ATCG00750.1 (ribosomal protein S11)

HSP 1 Score: 184.1 bits (466), Expect = 9.900e-47
Identity = 96/133 (72.18%), Postives = 107/133 (80.45%), Query Frame = 1 

		  

Query: 104 RELRQKFAKIVSLAPEGVLSGMKEQKWIHEGLITESLPNDVRGRVVSWASAGTCGFRGTK 163
           +  R    K V   P+GV+     Q   +  ++T +   DVRGRV+SW+SAGTCGFRGT+
Sbjct: 12  KNTRSGSRKNVRRIPKGVIH---VQASFNNTIVTVT---DVRGRVISWSSAGTCGFRGTR 71

Query: 164 RGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPM 223
           RGTPFAAQTAAGNAIR VV+QGMQRAEV IKGPGLGRDAALRAIRRSGILLSFVRDVTPM
Sbjct: 72  RGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPM 131

Query: 224 PHNGCRPPKKRRV 237
           PHNGCRPPKKRRV
Sbjct: 132 PHNGCRPPKKRRV 138
[Close]
BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.300e-19
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1 

		  

Query: 2   IQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAV 61
           IQ  T L V DNSGA+++MCI+ +    ++ AR+GD IVA +KEA+PN  +++  V+  V
Sbjct: 48  IQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGV 107

Query: 62  VVRTCKELKRDNGMIIRYDDNAAVIIDQ-------EGNPKGTRIFGAIARELR-QKFAKI 118
           VVR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  ELR +K  KI
Sbjct: 108 VVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKI 167
[Close]
BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.100e-12
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 1 

		  

Query: 8   LNVADNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
[Close]
BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.100e-12
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 1 

		  

Query: 8   LNVADNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
The following BLAST results are available for this feature:
BLAST of Spo13649.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|357453261|ref|XP_003596907.1|7.3e-6870.550S ribosomal protein L14 [Med... [more]
gi|11497563|ref|NP_054971.1|5.3e-58100.ribosomal protein L14 [Spinaci... [more]
gi|902181471|gb|KNA09754.1|2.6e-5799.1hypothetical protein SOVF_1504... [more]
gi|910354353|ref|YP_009160839.1|5.8e-5797.4ribosomal protein L14 (chlorop... [more]
gi|982898198|ref|YP_009221844.1|9.9e-5796.6ribosomal protein L14 (chlorop... [more]
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BLAST of Spo13649.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
G7IRF6_MEDTR5.1e-6870.550S ribosomal protein L14 OS=M... [more]
A0A0K9QR25_SPIOL1.8e-5799.1Uncharacterized protein (Fragm... [more]
A0A0K0K9G2_9CARY4.1e-5797.450S ribosomal protein L14, chl... [more]
A0A0K0K8A5_9CARY4.1e-5797.450S ribosomal protein L14, chl... [more]
A0A0G2R7W9_MESCR6.9e-5796.650S ribosomal protein L14, chl... [more]
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BLAST of Spo13649.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RK14_SPIOL3.3e-60100.50S ribosomal protein L14, chl... [more]
RK14_COFAR4.9e-5692.550S ribosomal protein L14, chl... [more]
RK14_EUCGG4.9e-5691.650S ribosomal protein L14, chl... [more]
RK14_PLAOC4.9e-5692.550S ribosomal protein L14, chl... [more]
RK14_CITSI8.4e-5691.650S ribosomal protein L14, chl... [more]
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BLAST of Spo13649.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
ATCG00780.11.5e-5590.8ribosomal protein L14[more]
ATCG00750.19.9e-4772.1ribosomal protein S11[more]
AT5G46160.11.3e-1942.7Ribosomal protein L14p/L23e fa... [more]
AT1G04480.12.1e-1235.0Ribosomal protein L14p/L23e fa... [more]
AT2G33370.12.1e-1235.0Ribosomal protein L14p/L23e fa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3D2.40.150.20coord: 1..119
score: 6.0
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 1..121
score: 25
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..121
score: 2.8
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..119
score: 2.8
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..121
score: 9.5
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 1..119
score: 4.97
IPR001971Ribosomal protein S11GENE3D3.30.420.80coord: 143..236
score: 9.0
IPR001971Ribosomal protein S11HAMAPMF_01310Ribosomal_S11coord: 54..236
score: 25
IPR001971Ribosomal protein S11PFAMPF00411Ribosomal_S11coord: 143..235
score: 8.4
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMsTIGR01067TIGR01067coord: 1..119
score: 1.7
IPR018102Ribosomal S11, conserved sitePROSITEPS00054RIBOSOMAL_S11coord: 204..226
scor
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 60..86
scor
NoneNo IPR availableunknownSSF53137Translational machinery componentscoord: 143..236
score: 2.16

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
RNA-Seq Expression