

|
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCCTAAAACATGCTCCCAACCCCAAACAGGCAAACATAAGTATAAAAAGAGTATCATCCATTTCTTTGTCAACGACATTTTATTAGAAACAATTAAAAATCACCTCGTGAAGTTGGACGGTTGGACCTCAACAACAACAACAACAAACAGCAACATCAAAACAATATCAAGATTCAAAGAAAAACCTTACCAAGCTACTGAAAATGGAAGGAGAGACGATCAAAATTGTGAAATTGAAGGCAATTGAAGCAACCCCTGAAACCTTCAAAGATTACGGTCAAGTTATTCAAGCTTCAGCTGATGGTGAGGAATTTGGACCTCATGATGCTCAGCTTCACCTTTCCCGTGGAACTCCCAGGTCCATTTTCTCTCTCCCTTTACCTTTATATGTTGGGTTTCTGGGTTTTTGTTGTTTCTTCATTCCTGCTTATTTTTTATTTATTTAATTTTTTTGATTAATTTGATGTTTTTTTTGCTGCTATTGTTGGGGGTTTTCAGATGTTCAGCTACATTTTGTTGGGTATATTCAATTTGGGGTTTAATCTGCTTGGTTGTTCACATGATTAATGTGAAAAGTGTGCACCTTTTGGCTTTATTGGATTGATGAAATTTTCTGCTGCTAAAGTTGGGGTTTTGAAGGTTTTCTGTTGAATTTTGTTCGGTATCTTTAGTTTGAGGACATAATAATCTTCTAGATTTCCTAATGTTGGATTGATTAATCTGAAAAGTTATCAATTTTTACTGTTTTTCATTTGCATTCAAAAGTCACATTTAAGATTCCCAAATTAATTGGATGGAGTTTATTTTGAAATAGAAGGTATTTTTAGATGGATTCTTTATACTTGCTAAAACTAGGTTTGATTTGAGTCACACATACATTATCCTTTAATTTGTGGAGTAAGTTGTGTATCGAGAGTTTTGTTTTCACAAGTAGGGCTTGTATATTCAATTGAAGTACTCTAATTAGCAACATAAACTACTTGAAATGACCAAGATACTCCAATGTAAATCGACTAGAGTGTGATTTATGAAGAGGGGTTAGGTTGGGATAGAGAACGTGGCGCTTGTTGTCATTTTACAGTACTTTGGGTAAGCTACCGAACTGTTAGGTAATAGGTATACAACCACAACTTTTGATTTAGATCGCAATTTCGCAACTTAGCAATGTTTAGCATAGTAACTTTTGTTTATTTTGGTGTAGATAAGTATCCTTGTAGACGGTATATCACCTTTGCTTGATTGTTTACTCCTTTTTTATTTACCAAGTATAGACCATACATGGTGTGCACACTATCACAGTTGTTCCCATGTGGTATAAGATGGTATTTTTTTGAATGGTAGCAACATTGCAAGAAAATCAAGGATTATTACCTAGAAAATTGTGTCAAAATGTCTAGTACGTACTAATAAAATTGGATTCATACCCATATGAAGAGATGTGGACATGAGAAATAGTCATATATTCGAATGAGATGAATGATTTCACTAAAGAAGTATGCAATGAACTGATATTATGGAGAGGGATATTTTAGGGAGTTGCATTAGGATACAGTTACCAGTGGCCTGCATAATAAGTTATCTAAAAGCTCTGTATAAAGATCATGTTAGAGAGCTGGAAAGGCATGTTTAATATTGTGGAAAGTGAGTAGTAAGTTTAGATTGGAAGAGTGCCCTTCCTCTCGAAAGATTGGCTAGGTTATAATTGGTGATTTCCACCGTTATAATCATCAATACAATCATATATTCATATTGTTACTTGTTCTTCCTTAATCCTCCTTCTCCCTTACCTCTCTTTTCCGCCATTGATCTTACTGTTTTGGTCAGTCATATGTGTTAATTCATAGCAAAGTGGTACTTTGAGCACTTGCTTCTCGTGGGACATTTCATTTGTCATATAGCCCCTTATAGTTTACCATTAATCTTCTATCACCAATTCACCAGCCAAAGGAGCTAGTGCCGTACAAGGTTGGGGAGCCTATAAATTGTACGGAATATAGTTGATAGAGGATACAATGTTTTTTGGACCACCTAAAAGGATTGGTGGAATGATCACTTTCATGTTAAGTTGTACTTCAGTTGCTAGAAGCCTAGGACGCCTTGTTACAAGTCCTTGTTCTACTTTTGGCAATTGAAGTGGATGCAAAGGGTCCTTTTCTTTTGTATGGTCGTCATCTTGATTTAATTTCCTAACTTACGCATAATGAGAAGATTATCGCCATTTTGCAGTAGTTAAAGTCCTGATTCTATGTGTTTGCTTCCCTTTTTCATAAAAATACAGGAATCTTGTTTTTGCTTCAAAATATTTATTTGTTTATTCTTAATGGAAAATTGCAATTTATTCTTTATTTTGACCTGTTTATATCTAGAATGAGGCAAAAACAGATAAAGGAAAAGCTTTGCTGTCATGGATAACTTAATGTGTTGATAACTTTTCTGCTAACAAATAACTTGATGATAAATATTTCGTTAACTTTCGTAGAAACAAGTGATCTTTCTTTAGCTAGTTTCCACAAGCTTAAAGTTTTAGCTTCTAAGTTACGAAAGAAAGTTGCTCAGCAGATTTTGTTAACGATTTGCTCATGTATAATGTCAGGTTTTACATTATGCAACTTAAAGATCGAGAACTAAAGTTTTCCACAATCACCCATCATGCAAATGTGACTCAGTGCCTAGGCTCCATTGGTGGCCATGTTTGGTATCTTGGAGTTGCTAAGCCATCCATAGTGGATTTATATATCCCTCCTTGTGTGGAAGAATTGCATGATTCGAGTGCAAATGTAGTTGAACCGAGCAAAAAAATTGCCAAGTCACCTTGCGGCCATTTATATGTACCTCCTAGTGTGGAAGAAGTGCAGGTCTTCAAAATCACGGGCCCTAAGTTTCTTAAGCTTAATGTTGGGACATGGCATGCTGGACCTTTATTTCTCCAAGATAAGATGGATTTTTACAACTTAGAATTGAGTAATACAAATGTGAGTTTCGCTTTTCCTTTCTTTCAATGTACACTTTTTTTTTCTTTTTCTGCGCCACTTTCTATTTGAAAAAATAAATGCATACAACCGGTTGGTGGAGTTGGTGGGGAACTCACCTTGTGACTTGGAGGTCACAGGTCAAACCCCATCAGCTGCGAAATGTTTGGGAGTGGCTCAAACGAAGACCTGGGTAGCTGAGCTAACTAACCTGTACTAGATGCTGGTTCAATAGAGTCCCTTCTTCTTACTTATTTTTTTTTTTTTAGAAAAAGGATGATTAATTATGTAATCTTTAGAGGAGGCTTCTAAGTCTAAAAAAATGTTTAGTACTCTCTTGTATGGCATTATATATCTGCTATAGGATCATGGGTGATTTGATTCTCTGTGATTATCAGATGACATAGTCCCCTGAAGGATACTTAGCCCTCCTTTTAAGTTAACCTCCTTTCCTGTCTTTTGTTTCGAGGGTTGCACAAACACCAGGCATTAGCTAGTCATACCTTAATTTGAGTTTTTTTTGGTAACCAACTTAATGCATGAAATACATGAAGATTCATCTGAAAATCAAGATGTTATGAACCATCCTAAATACCTAAATGGGTGGGTTTAATTTATCTGAAAAGCTTTATTGCTAAAGCAATTGGTTTTATAACCATGACTTGCTTGTTTGATTGTAGGTGGTGGATCATACAATTCATAACTTCAGCAAAGAGAACGGGGTACAATTTGTGATCGATGAATAACCGACGCTGCTTGGTAATTGATCGAGGGGCTGGACCGCTGAAGTGACAAAACAGGACCTTATGCTGCATTTATCCCCTTCATTCCTATAATTTCCACTTTGTATAATGCACTAATCAACTTGATACTACATTTTCAAGTGATGCTATTCACTTCTTTTTAGTTCCGGTGAATTGCAACTTGAAAATTTTCATCCGTTTCTTTCCAGTTTACTTGGAGATGTATATTTACAGACCGGTAACTATAACTACATGATTCCTTTTGTTTTTATATAAATAAATCTTCGTTTTTGTTGTTTCTTTACACCCTAAAACATGCTCCCAACCCCAAACAGGCAAACATAAGTATAAAAAGAGTATCATCCATTTCTTTGTCAACGACATTTTATTAGAAACAATTAAAAATCACCTCGTGAAGTTGGACGGTTGGACCTCAACAACAACAACAACAAACAGCAACATCAAAACAATATCAAGATTCAAAGAAAAACCTTACCAAGCTACTGAAAATGGAAGGAGAGACGATCAAAATTGTGAAATTGAAGGCAATTGAAGCAACCCCTGAAACCTTCAAAGATTACGGTCAAGTTATTCAAGCTTCAGCTGATGGTGAGGAATTTGGACCTCATGATGCTCAGCTTCACCTTTCCCGTGGAACTCCCAGGTTTTACATTATGCAACTTAAAGATCGAGAACTAAAGTTTTCCACAATCACCCATCATGCAAATGTGACTCAGTGCCTAGGCTCCATTGGTGGCCATGTTTGGTATCTTGGAGTTGCTAAGCCATCCATAGTGGATTTATATATCCCTCCTTGTGTGGAAGAATTGCATGATTCGAGTGCAAATGTAGTTGAACCGAGCAAAAAAATTGCCAAGTCACCTTGCGGCCATTTATATGTACCTCCTAGTGTGGAAGAAGTGCAGGTCTTCAAAATCACGGGCCCTAAGTTTCTTAAGCTTAATGTTGGGACATGGCATGCTGGACCTTTATTTCTCCAAGATAAGATGGATTTTTACAACTTAGAATTGAGTAATACAAATGTGGTGGATCATACAATTCATAACTTCAGCAAAGAGAACGGGGTACAATTTGTGATCGATGAATAACCGACGCTGCTTGGTAATTGATCGAGGGGCTGGACCGCTGAAGTGACAAAACAGGACCTTATGCTGCATTTATCCCCTTCATTCCTATAATTTCCACTTTGTATAATGCACTAATCAACTTGATACTACATTTTCAAGTGATGCTATTCACTTCTTTTTAGTTCCGGTGAATTGCAACTTGAAAATTTTCATCCGTTTCTTTCCAGTTTACTTGGAGATGTATATTTACAGACCGGTAACTATAACTACATGATTCCTTTTGTTTTTATATAAATAAATCTTCGTTTTTGTTGTTTCTTTA ATGGAAGGAGAGACGATCAAAATTGTGAAATTGAAGGCAATTGAAGCAACCCCTGAAACCTTCAAAGATTACGGTCAAGTTATTCAAGCTTCAGCTGATGGTGAGGAATTTGGACCTCATGATGCTCAGCTTCACCTTTCCCGTGGAACTCCCAGGTTTTACATTATGCAACTTAAAGATCGAGAACTAAAGTTTTCCACAATCACCCATCATGCAAATGTGACTCAGTGCCTAGGCTCCATTGGTGGCCATGTTTGGTATCTTGGAGTTGCTAAGCCATCCATAGTGGATTTATATATCCCTCCTTGTGTGGAAGAATTGCATGATTCGAGTGCAAATGTAGTTGAACCGAGCAAAAAAATTGCCAAGTCACCTTGCGGCCATTTATATGTACCTCCTAGTGTGGAAGAAGTGCAGGTCTTCAAAATCACGGGCCCTAAGTTTCTTAAGCTTAATGTTGGGACATGGCATGCTGGACCTTTATTTCTCCAAGATAAGATGGATTTTTACAACTTAGAATTGAGTAATACAAATGTGGTGGATCATACAATTCATAACTTCAGCAAAGAGAACGGGGTACAATTTGTGATCGATGAATAA MEGETIKIVKLKAIEATPETFKDYGQVIQASADGEEFGPHDAQLHLSRGTPRFYIMQLKDRELKFSTITHHANVTQCLGSIGGHVWYLGVAKPSIVDLYIPPCVEELHDSSANVVEPSKKIAKSPCGHLYVPPSVEEVQVFKITGPKFLKLNVGTWHAGPLFLQDKMDFYNLELSNTNVVDHTIHNFSKENGVQFVIDE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13624.1 vs. NCBI nr
Match: gi|902236135|gb|KNA24234.1| (hypothetical protein SOVF_017820 [Spinacia oleracea]) HSP 1 Score: 416.0 bits (1068), Expect = 3.700e-113 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo13624.1 vs. NCBI nr
Match: gi|731318365|ref|XP_010669679.1| (PREDICTED: uncharacterized protein LOC104886849 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 355.1 bits (910), Expect = 7.700e-95 Identity = 173/199 (86.93%), Postives = 185/199 (92.96%), Query Frame = 1
BLAST of Spo13624.1 vs. NCBI nr
Match: gi|870866780|gb|KMT17713.1| (hypothetical protein BVRB_2g036580 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 354.0 bits (907), Expect = 1.700e-94 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of Spo13624.1 vs. NCBI nr
Match: gi|1021570092|ref|XP_016176239.1| (PREDICTED: uncharacterized protein LOC107618640 isoform X2 [Arachis ipaensis]) HSP 1 Score: 283.1 bits (723), Expect = 3.700e-73 Identity = 132/196 (67.35%), Postives = 159/196 (81.12%), Query Frame = 1
BLAST of Spo13624.1 vs. NCBI nr
Match: gi|965607946|dbj|BAT94437.1| (hypothetical protein VIGAN_08104200 [Vigna angularis var. angularis]) HSP 1 Score: 280.4 bits (716), Expect = 2.400e-72 Identity = 133/196 (67.86%), Postives = 155/196 (79.08%), Query Frame = 1
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZ81_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_017820 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 2.600e-113 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0Q5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036580 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.200e-94 Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SNN9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G104200 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.700e-72 Identity = 133/196 (67.86%), Postives = 155/196 (79.08%), Query Frame = 1
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Match: A4GX19_PHAVU (Putative ureidoglycolate hydrolase OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.900e-72 Identity = 134/196 (68.37%), Postives = 155/196 (79.08%), Query Frame = 1
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Match: C6T2X8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G213900 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 8.400e-72 Identity = 134/196 (68.37%), Postives = 156/196 (79.59%), Query Frame = 1
BLAST of Spo13624.1 vs. TAIR (Arabidopsis)
Match: AT2G35830.2 (unknown protein) HSP 1 Score: 238.4 bits (607), Expect = 3.700e-63 Identity = 119/191 (62.30%), Postives = 138/191 (72.25%), Query Frame = 1
BLAST of Spo13624.1 vs. TAIR (Arabidopsis)
Match: AT2G35820.1 (ureidoglycolate hydrolases) HSP 1 Score: 235.3 bits (599), Expect = 3.200e-62 Identity = 113/190 (59.47%), Postives = 136/190 (71.58%), Query Frame = 1
BLAST of Spo13624.1 vs. TAIR (Arabidopsis)
Match: AT2G35810.1 (unknown protein) HSP 1 Score: 230.7 bits (587), Expect = 7.800e-61 Identity = 116/191 (60.73%), Postives = 139/191 (72.77%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13624.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13624.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13624.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo13624.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|